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For: Dannenhoffer-Lafage T, Voth GA. Reactive Coarse-Grained Molecular Dynamics. J Chem Theory Comput 2020;16:2541-2549. [DOI: 10.1021/acs.jctc.9b01140] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
Number Cited by Other Article(s)
1
Sami S, Marrink SJ. Reactive Martini: Chemical Reactions in Coarse-Grained Molecular Dynamics Simulations. J Chem Theory Comput 2023. [PMID: 37327401 DOI: 10.1021/acs.jctc.2c01186] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
2
Ricci E, Vergadou N. Integrating Machine Learning in the Coarse-Grained Molecular Simulation of Polymers. J Phys Chem B 2023;127:2302-2322. [PMID: 36888553 DOI: 10.1021/acs.jpcb.2c06354] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/09/2023]
3
Jin J, Voth GA. Statistical Mechanical Design Principles for Coarse-Grained Interactions across Different Conformational Free Energy Surfaces. J Phys Chem Lett 2023;14:1354-1362. [PMID: 36728761 PMCID: PMC9940719 DOI: 10.1021/acs.jpclett.2c03844] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2022] [Accepted: 01/27/2023] [Indexed: 06/18/2023]
4
Co NT, Li MS, Krupa P. Computational Models for the Study of Protein Aggregation. Methods Mol Biol 2022;2340:51-78. [PMID: 35167070 DOI: 10.1007/978-1-0716-1546-1_4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
5
Singh AK, Burada PS, Roy A. Biomolecular response to hour-long ultralow field microwave radiation: An effective coarse-grained model simulation. Phys Rev E 2021;103:042416. [PMID: 34005990 DOI: 10.1103/physreve.103.042416] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2020] [Accepted: 03/16/2021] [Indexed: 11/07/2022]
6
Jackson NE. Coarse-Graining Organic Semiconductors: The Path to Multiscale Design. J Phys Chem B 2021;125:485-496. [PMID: 33369413 DOI: 10.1021/acs.jpcb.0c09749] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
7
Mironenko AV, Voth GA. Density Functional Theory-Based Quantum Mechanics/Coarse-Grained Molecular Mechanics: Theory and Implementation. J Chem Theory Comput 2020;16:6329-6342. [PMID: 32877176 DOI: 10.1021/acs.jctc.0c00751] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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