1
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Upadhyay S, Benali A, Jordan KD. Capturing Correlation Effects in Positron Binding to Atoms and Molecules. J Chem Theory Comput 2024. [PMID: 39288307 DOI: 10.1021/acs.jctc.4c00727] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/19/2024]
Abstract
A major challenge in contemporary electronic structure theory involves the development of methods to describe in a balanced manner the contribution of correlation effects to energy differences. This challenge can be even greater for multicomponent systems containing more than one type of quantum particle. In the present work, we describe a flexible code for carrying out self-consistent field and configuration interaction (CI) calculations on multicomponent systems and use it to generate trial wave functions for use in diffusion Monte Carlo (DMC) calculations of the positron affinity of Be, Be2, Be4, Mg, CS2, and benzene. The resulting positron affinities (PAs) are in good agreement with the best values from the literature.
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Affiliation(s)
- Shiv Upadhyay
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
- Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15218, United States
| | - Anouar Benali
- Computational Sciences Division, Argonne National Laboratory, Lemont, Illinois 60439, United States
| | - Kenneth D Jordan
- Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15218, United States
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2
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Li X, Huang JC, Zhang GZ, Li HE, Shen ZP, Zhao C, Li J, Hu HS. Improved optimization for the neural-network quantum states and tests on the chromium dimer. J Chem Phys 2024; 160:234102. [PMID: 38884396 DOI: 10.1063/5.0214150] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2024] [Accepted: 05/30/2024] [Indexed: 06/18/2024] Open
Abstract
The advent of Neural-network Quantum States (NQS) has significantly advanced wave function ansatz research, sparking a resurgence in orbital space variational Monte Carlo (VMC) exploration. This work introduces three algorithmic enhancements to reduce computational demands of VMC optimization using NQS: an adaptive learning rate algorithm, constrained optimization, and block optimization. We evaluate the refined algorithm on complex multireference bond stretches of H2O and N2 within the cc-pVDZ basis set and calculate the ground-state energy of the strongly correlated chromium dimer (Cr2) in the Ahlrichs SV basis set. Our results achieve superior accuracy compared to coupled cluster theory at a relatively modest CPU cost. This work demonstrates how to enhance optimization efficiency and robustness using these strategies, opening a new path to optimize large-scale restricted Boltzmann machine-based NQS more effectively and marking a substantial advancement in NQS's practical quantum chemistry applications.
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Affiliation(s)
- Xiang Li
- Department of Chemistry and Engineering Research Center of Advanced Rare-Earth Materials of Ministry of Education, Tsinghua University, Beijing 100084, China
| | - Jia-Cheng Huang
- Department of Chemistry and Engineering Research Center of Advanced Rare-Earth Materials of Ministry of Education, Tsinghua University, Beijing 100084, China
| | - Guang-Ze Zhang
- Department of Chemistry and Engineering Research Center of Advanced Rare-Earth Materials of Ministry of Education, Tsinghua University, Beijing 100084, China
| | - Hao-En Li
- Department of Chemistry and Engineering Research Center of Advanced Rare-Earth Materials of Ministry of Education, Tsinghua University, Beijing 100084, China
| | - Zhu-Ping Shen
- Department of Chemistry and Engineering Research Center of Advanced Rare-Earth Materials of Ministry of Education, Tsinghua University, Beijing 100084, China
| | - Chen Zhao
- Department of Chemistry and Engineering Research Center of Advanced Rare-Earth Materials of Ministry of Education, Tsinghua University, Beijing 100084, China
| | - Jun Li
- Department of Chemistry and Engineering Research Center of Advanced Rare-Earth Materials of Ministry of Education, Tsinghua University, Beijing 100084, China
- Department of Chemistry and Guangdong Provincial Key Laboratory of Catalytic Chemistry, Southern University of Science and Technology, Shenzhen 518055, China
- Fundamental Science Center of Rare Earths, Ganjiang Innovation Academy, Chinese Academy of Sciences, Ganzhou 341000, China
| | - Han-Shi Hu
- Department of Chemistry and Engineering Research Center of Advanced Rare-Earth Materials of Ministry of Education, Tsinghua University, Beijing 100084, China
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3
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Garner SM, Upadhyay S, Li X, Hammes-Schiffer S. Nuclear-Electronic Orbital Time-Dependent Configuration Interaction Method. J Phys Chem Lett 2024; 15:6017-6023. [PMID: 38815051 DOI: 10.1021/acs.jpclett.4c00805] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/01/2024]
Abstract
Combining real-time electronic structure with the nuclear-electronic orbital (NEO) method has enabled the simulation of complex nonadiabatic chemical processes. However, accurate descriptions of hydrogen tunneling and double excitations require multiconfigurational treatments. Herein, we develop and implement the real-time NEO time-dependent configuration interaction (NEO-TDCI) approach. Comparison to NEO-full CI calculations of absorption spectra for a molecular system shows that the NEO-TDCI approach can accurately capture the tunneling splitting associated with the electronic ground state as well as vibronic progressions corresponding to double electron-proton excitations associated with excited electronic states. Both of these features are absent from spectra obtained with single reference real-time NEO methods. Our simulations of hydrogen tunneling dynamics illustrate the oscillation of the proton density from one side to the other via a delocalized, bilobal proton wave function. These results indicate that the NEO-TDCI approach is highly suitable for studying hydrogen tunneling and other inherently multiconfigurational systems.
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Affiliation(s)
- Scott M Garner
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
| | - Shiv Upadhyay
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
| | - Xiaosong Li
- Department of Chemistry, University of Washington, Seattle, Washington 98195, United States
| | - Sharon Hammes-Schiffer
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
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4
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Chow M, Li TE, Hammes-Schiffer S. Nuclear-Electronic Orbital Quantum Mechanical/Molecular Mechanical Real-Time Dynamics. J Phys Chem Lett 2023; 14:9556-9562. [PMID: 37857272 PMCID: PMC11401051 DOI: 10.1021/acs.jpclett.3c02275] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2023]
Abstract
Simulating the nuclear-electronic quantum dynamics of large-scale molecular systems in the condensed phase is key for studying biologically and chemically important processes such as proton transfer and proton-coupled electron transfer reactions. Herein, the real-time nuclear-electronic orbital time-dependent density functional theory (RT-NEO-TDDFT) approach is combined with a hybrid quantum mechanical/molecular mechanical (QM/MM) strategy to enable the accurate description of coupled nuclear-electronic quantum dynamics in the presence of heterogeneous environments such as solvent or proteins. The densities of the electrons and quantum protons are propagated in real time, while the other nuclei are propagated classically on the instantaneous electron-proton vibronic surface. This approach is applied to phenol bound to lysozyme, intramolecular proton transfer in malonaldehyde, and nonequilibrium excited-state intramolecular proton transfer in o-hydroxybenzaldehyde. These examples illustrate that the RT-NEO-TDDFT framework, coupled with an atomistic representation of the environment, allows the simulation of condensed-phase systems that exhibit significant nuclear quantum effects.
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Affiliation(s)
- Mathew Chow
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, United States
| | - Tao E Li
- Department of Chemistry, Yale University, New Haven, Connecticut 06520, United States
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5
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Feldmann R, Baiardi A, Reiher M. Symmetry-Projected Nuclear-Electronic Hartree-Fock: Eliminating Rotational Energy Contamination. J Phys Chem A 2023; 127:8943-8954. [PMID: 37831620 PMCID: PMC10614303 DOI: 10.1021/acs.jpca.3c04822] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2023] [Revised: 08/31/2023] [Indexed: 10/15/2023]
Abstract
We present a symmetry projection technique for enforcing rotational and parity symmetries in nuclear-electronic Hartree-Fock wave functions, which treat electrons and nuclei on equal footing. The molecular Hamiltonian obeys rotational and parity inversion symmetries, which are, however, broken by expanding in Gaussian basis sets that are fixed in space. We generate a trial wave function with the correct symmetry properties by projecting the wave function onto representations of the three-dimensional rotation group, i.e., the special orthogonal group in three dimensions SO(3). As a consequence, the wave function becomes an eigenfunction of the angular momentum operator which (i) eliminates the contamination of the ground-state wave function by highly excited rotational states arising from the broken rotational symmetry and (ii) enables the targeting of specific rotational states of the molecule. We demonstrate the efficiency of the symmetry projection technique by calculating the energies of the low-lying rotational states of the H2 and H3+ molecules.
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Affiliation(s)
- Robin Feldmann
- ETH Zürich, Department of Chemistry
and Applied Biosciences, Vladimir-Prelog-Weg 2, Zürich 8093, Switzerland
| | - Alberto Baiardi
- ETH Zürich, Department of Chemistry
and Applied Biosciences, Vladimir-Prelog-Weg 2, Zürich 8093, Switzerland
| | - Markus Reiher
- ETH Zürich, Department of Chemistry
and Applied Biosciences, Vladimir-Prelog-Weg 2, Zürich 8093, Switzerland
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6
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Feldmann R, Baiardi A, Reiher M. Second-Order Self-Consistent Field Algorithms: From Classical to Quantum Nuclei. J Chem Theory Comput 2023; 19:856-873. [PMID: 36701300 DOI: 10.1021/acs.jctc.2c01035] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
This work presents a general framework for deriving exact and approximate Newton self-consistent field (SCF) orbital optimization algorithms by leveraging concepts borrowed from differential geometry. Within this framework, we extend the augmented Roothaan-Hall (ARH) algorithm to unrestricted electronic and nuclear-electronic calculations. We demonstrate that ARH yields an excellent compromise between stability and computational cost for SCF problems that are hard to converge with conventional first-order optimization strategies. In the electronic case, we show that ARH overcomes the slow convergence of orbitals in strongly correlated molecules with the example of several iron-sulfur clusters. For nuclear-electronic calculations, ARH significantly enhances the convergence already for small molecules, as demonstrated for a series of protonated water clusters.
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Affiliation(s)
- Robin Feldmann
- ETH Zürich, Laboratorium für Physikalische Chemie, Vladimir-Prelog-Weg 2, 8093 Zürich, Switzerland
| | - Alberto Baiardi
- ETH Zürich, Laboratorium für Physikalische Chemie, Vladimir-Prelog-Weg 2, 8093 Zürich, Switzerland
| | - Markus Reiher
- ETH Zürich, Laboratorium für Physikalische Chemie, Vladimir-Prelog-Weg 2, 8093 Zürich, Switzerland
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7
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Samsonova I, Tucker GB, Alaal N, Brorsen KR. Hydrogen-Atom Electronic Basis Sets for Multicomponent Quantum Chemistry. ACS OMEGA 2023; 8:5033-5041. [PMID: 36777583 PMCID: PMC9910068 DOI: 10.1021/acsomega.2c07782] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/06/2022] [Accepted: 01/13/2023] [Indexed: 06/18/2023]
Abstract
Multicomponent methods are a conceptually simple way to include nuclear quantum effects into quantum chemistry calculations. In multicomponent methods, the electronic molecular orbitals are described using the linear combination of atomic orbitals approximation. This requires the selection of a one-particle electronic basis set which, in practice, is commonly a correlation-consistent basis set. In multicomponent method studies, it has been demonstrated that large electronic basis sets are required for quantum hydrogen nuclei to accurately describe electron-nuclear correlation. However, as we show in this study, much of the need for large electronic basis sets is due to the correlation-consistent electronic basis sets not being optimized to describe nuclear properties and electron-nuclear correlation. Herein, we introduce a series of correlation-consistent electronic basis sets for hydrogen atoms called cc-pVnZ-mc with additional basis functions optimized to reproduce multicomponent density functional theory protonic densities. These new electronic basis sets are shown to yield better protonic densities with fewer electronic basis functions than the standard correlation-consistent basis sets and reproduce other protonic properties such as proton affinities and protonic excitation energies, even though they were not optimized for these purposes. The cc-pVnZ-mc basis sets should enable multicomponent many-body calculations on larger systems due to the improved computational efficiency they provide for a given level of accuracy.
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8
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Dang DK, Kammeraad JA, Zimmerman PM. Advances in Parallel Heat Bath Configuration Interaction. J Phys Chem A 2023; 127:400-411. [PMID: 36580361 DOI: 10.1021/acs.jpca.2c07949] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Abstract
Heat-bath configuration interaction (HCI) is a deterministic method that approaches the full CI limit at greatly reduced computational cost. In this work, computational improvements to the HCI algorithm are introduced targeting speed, parallel efficiency, and memory requirements. The new implementation introduces a hash function to distribute determinants and takes advantage of MPI and OpenMP for parallelism allowing for a (22e,168o) active space to be studied, which explicitly includes 2.39 × 107 variational determinants and 8.95 × 1010 perturbative determinants. Benchmarks show up to 86% parallel efficiency of the perturbative step on 32 nodes (4096 cores) and a total efficiency of 74%. The new HCI implementation is benchmarked for accuracy against prior results and applied to study the triplet-quintet gap in the challenging [FeO(NH3)5]2+ complex.
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Affiliation(s)
- Duy-Khoi Dang
- Department of Chemistry, University of Michigan 930 North University Avenue Ann Arbor, Michigan 48109, United States
| | - Joshua A Kammeraad
- Department of Chemistry, University of Michigan 930 North University Avenue Ann Arbor, Michigan 48109, United States
| | - Paul M Zimmerman
- Department of Chemistry, University of Michigan 930 North University Avenue Ann Arbor, Michigan 48109, United States
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9
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Dang DK, Wilson LW, Zimmerman PM. The numerical evaluation of Slater integrals on graphics processing units. J Comput Chem 2022; 43:1680-1689. [PMID: 35861566 DOI: 10.1002/jcc.26968] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2021] [Revised: 05/13/2022] [Accepted: 06/27/2022] [Indexed: 11/11/2022]
Abstract
This article presents SlaterGPU, a graphics processing unit (GPU) accelerated library that uses OpenACC to numerically compute Slater-type orbital (STO) integrals. The electron repulsion integrals (ERI) are computed under the RI approximation using the Coulomb potential of the Slater basis function. To fully realize the performance capabilities of modern GPUs, the Slater integrals are evaluated in mixed-precision, resulting in speedups for the ERIs of over 80×. Parallelization on multiple GPUs allows for integral throughput of over 3 million integrals per second. This places STO integral throughput within reach of single-threaded, conventional Gaussian integration schemes. To test the quality of the integrals, the fluorine exchange reaction barrier in fluoromethane was computed using heat-bath configuration interaction (HBCI). In addition, the singlet-triplet gap of cyclobutadiene was examined using HBCI in a triple- ζ $$ \zeta $$ , polarized basis set. These benchmarks demonstrate the library's ability to generate the full set of integrals necessary for configuration interaction with up to 6 h $$ 6h $$ functions in the auxiliary basis.
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Affiliation(s)
- Duy-Khoi Dang
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan, USA
| | - Leighton W Wilson
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan, USA.,Department of Mathematics, University of Michigan, Ann Arbor, Michigan, USA
| | - Paul M Zimmerman
- Department of Chemistry, University of Michigan, Ann Arbor, Michigan, USA
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10
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Feldmann R, Muolo A, Baiardi A, Reiher M. Quantum Proton Effects from Density Matrix Renormalization Group Calculations. J Chem Theory Comput 2022; 18:234-250. [PMID: 34978441 DOI: 10.1021/acs.jctc.1c00913] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
We recently introduced [J. Chem. Phys. 2020, 152, 204103] the nuclear-electronic all-particle density matrix renormalization group (NEAP-DMRG) method to solve the molecular Schrödinger equation, based on a stochastically optimized orbital basis, without invoking the Born-Oppenheimer approximation. In this work, we combine the DMRG method with the nuclear-electronic Hartree-Fock (NEHF-DMRG) approach, treating nuclei and electrons on the same footing. Inter- and intraspecies correlations are described within the DMRG method without truncating the excitation degree of the full configuration interaction wave function. We extend the concept of orbital entanglement and mutual information to nuclear-electronic wave functions and demonstrate that they are reliable metrics to detect strong correlation effects. We apply the NEHF-DMRG method to the HeHHe+ molecular ion, to obtain accurate proton densities, ground-state total energies, and vibrational transition frequencies by comparison with state-of-the-art data obtained with grid-based approaches and modern configuration interaction methods. For HCN, we improve on the accuracy of the latter approaches with respect to both the ground-state absolute energy and proton density, which is a major challenge for multireference nuclear-electronic state-of-the-art methods.
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Affiliation(s)
- Robin Feldmann
- Laboratory of Physical Chemistry, ETH Zürich, Vladimir-Prelog-Weg 2, 8093 Zürich, Switzerland
| | - Andrea Muolo
- Fritz Haber Center for Molecular Dynamics, Institute of Chemistry, The Hebrew University of Jerusalem, 91904 Jerusalem, Israel
| | - Alberto Baiardi
- Laboratory of Physical Chemistry, ETH Zürich, Vladimir-Prelog-Weg 2, 8093 Zürich, Switzerland
| | - Markus Reiher
- Laboratory of Physical Chemistry, ETH Zürich, Vladimir-Prelog-Weg 2, 8093 Zürich, Switzerland
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11
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Fajen OJ, Brorsen KR. Multicomponent MP4 and the inclusion of triple excitations in multicomponent many-body methods. J Chem Phys 2021; 155:234108. [PMID: 34937367 DOI: 10.1063/5.0071423] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
This study implements the full multicomponent third-order (MP3) and fourth-order (MP4) many-body perturbation theory methods for the first time. Previous multicomponent studies have only implemented a subset of the full contributions, and the present implementation is the first multicomponent many-body method to include any connected triples contribution to the electron-proton correlation energy. The multicomponent MP3 method is shown to be comparable in accuracy to the multicomponent coupled-cluster doubles method for the calculation of proton affinities, while the multicomponent MP4 method is of similar accuracy as the multicomponent coupled-cluster singles and doubles method. From the results in this study, it is hypothesized that the relative accuracy of multicomponent methods is more similar to their single-component counterparts than previously assumed. It is demonstrated that for multicomponent MP4, the fourth-order triple-excitation contributions can be split into electron-electron and electron-proton contributions and the electron-electron contributions ignored with very little loss of accuracy of protonic properties.
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Affiliation(s)
- O Jonathan Fajen
- Department of Chemistry, University of Missouri, Columbia, Missouri 65203, USA
| | - Kurt R Brorsen
- Department of Chemistry, University of Missouri, Columbia, Missouri 65203, USA
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12
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Alaal N, Brorsen KR. Multicomponent heat-bath configuration interaction with the perturbative correction for the calculation of protonic excited states. J Chem Phys 2021; 155:234107. [PMID: 34937361 DOI: 10.1063/5.0076006] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
In this study, we extend the multicomponent heat-bath configuration interaction (HCI) method to excited states. Previous multicomponent HCI studies have been performed using only the variational stage of the HCI algorithm as they have largely focused on the calculation of protonic densities. Because this study focuses on energetic quantities, a second-order perturbative correction after the variational stage is essential. Therefore, this study implements the second-order Epstein-Nesbet correction to the variational stage of multicomponent HCI for the first time. Additionally, this study introduces a new procedure for calculating reference excitation energies for multicomponent methods using the Fourier-grid Hamiltonian (FGH) method, which should allow the one-particle electronic basis set errors to be better isolated from errors arising from an incomplete description of electron-proton correlation. The excited-state multicomponent HCI method is benchmarked by computing protonic excitations of the HCN and FHF- molecules and is shown to be of similar accuracy to previous excited-state multicomponent methods such as the multicomponent time-dependent density-functional theory and equation-of-motion coupled-cluster theory relative to the new FGH reference values.
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Affiliation(s)
- Naresh Alaal
- Department of Chemistry, University of Missouri, Columbia, Missouri 65203, USA
| | - Kurt R Brorsen
- Department of Chemistry, University of Missouri, Columbia, Missouri 65203, USA
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13
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Chen Z, Yang J. Nucleus-electron correlation revising molecular bonding fingerprints from the exact wavefunction factorization. J Chem Phys 2021; 155:104111. [PMID: 34525813 DOI: 10.1063/5.0056773] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022] Open
Abstract
We present a novel theory and implementation for computing coupled electronic and quantal nuclear subsystems on a single potential energy surface, moving beyond the standard Born-Oppenheimer (BO) separation of nuclei and electrons. We formulate an exact self-consistent nucleus-electron embedding potential from the single product molecular wavefunction and demonstrate that the fundamental behavior of the correlated nucleus-electron can be computed for mean-field electrons that are responsive to a quantal anharmonic vibration of selected nuclei in a discrete variable representation. Geometric gauge choices are discussed and necessary for formulating energy invariant biorthogonal electronic equations. Our method is further applied to characterize vibrationally averaged molecular bonding properties of molecular energetics, bond lengths, and protonic and electron densities. Moreover, post-Hartree-Fock electron correlation can be conveniently computed on the basis of nucleus-electron coupled molecular orbitals, as demonstrated for correlated models of second-order Møllet-Plesset perturbation and full configuration interaction theories. Our approach not only accurately quantifies non-classical nucleus-electron couplings for revising molecular bonding properties but also provides an alternative time-independent approach for deploying non-BO molecular quantum chemistry.
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Affiliation(s)
- Ziyong Chen
- Department of Chemistry, The University of Hong Kong, Hong Kong, People's Republic of China
| | - Jun Yang
- Department of Chemistry, The University of Hong Kong, Hong Kong, People's Republic of China
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14
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Hammes-Schiffer S. Nuclear-electronic orbital methods: Foundations and prospects. J Chem Phys 2021; 155:030901. [PMID: 34293877 DOI: 10.1063/5.0053576] [Citation(s) in RCA: 19] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023] Open
Abstract
The incorporation of nuclear quantum effects and non-Born-Oppenheimer behavior into quantum chemistry calculations and molecular dynamics simulations is a longstanding challenge. The nuclear-electronic orbital (NEO) approach treats specified nuclei, typically protons, quantum mechanically on the same level as the electrons with wave function and density functional theory methods. This approach inherently includes nuclear delocalization and zero-point energy in molecular energy calculations, geometry optimizations, reaction paths, and dynamics. It can also provide accurate descriptions of excited electronic, vibrational, and vibronic states as well as nuclear tunneling and nonadiabatic dynamics. Nonequilibrium nuclear-electronic dynamics simulations beyond the Born-Oppenheimer approximation can be used to investigate a wide range of excited state processes. This Perspective provides an overview of the foundational NEO methods and enumerates the prospects for using these methods as building blocks for future developments. The conceptual simplicity and computational efficiency of the NEO approach will enhance its accessibility and applicability to diverse chemical and biological systems.
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15
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Bhatty AU, Brorsen KR. An alternative formulation of vibrational heat-bath configuration interaction. Mol Phys 2021. [DOI: 10.1080/00268976.2021.1936250] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
Affiliation(s)
- Abuzar U. Bhatty
- Department of Chemistry, University of Missouri, Columbia, MO, USA
| | - Kurt R. Brorsen
- Department of Chemistry, University of Missouri, Columbia, MO, USA
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16
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Pavošević F, Hammes-Schiffer S. Multicomponent Unitary Coupled Cluster and Equation-of-Motion for Quantum Computation. J Chem Theory Comput 2021; 17:3252-3258. [PMID: 33945684 DOI: 10.1021/acs.jctc.1c00220] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The variational quantum eigensolver (VQE) algorithm combined with the unitary coupled cluster (UCC) ansatz has been developed for the quantum computation of molecular energies and wave functions within the Born-Oppenheimer approximation. Herein, this approach is extended to multicomponent systems to enable the quantum mechanical treatment of more than one type of particle, such as electrons and positrons or electrons and nuclei, without invoking the Born-Oppenheimer approximation. Specifically, we introduce the multicomponent unitary coupled cluster (mcUCC) method combined with the VQE algorithm for the calculation of ground-state energies and wave functions as well as the multicomponent equation-of-motion (mcEOM) method for the calculation of excitation energies. These methods are developed within the nuclear-electronic orbital (NEO) framework and are formulated in the qubit basis to enable implementations on quantum computers. Moreover, these methods are used to calculate the ground-state energy and excitation energies of positronium hydride, where both electrons and the positron are treated quantum mechanically, as well as the H2 molecule, where both electrons and one proton are treated quantum mechanically. These applications validate the implementation and provide benchmark data for future calculations. The errors due to Trotterization of the mcUCC ansatz are also analyzed. This formalism, as well as the accompanying computer code, will serve as the basis for applications to more complex multicomponent systems, such as simulations of photoinduced nonadiabatic molecular processes, on both classical and quantum computers.
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Affiliation(s)
- Fabijan Pavošević
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520, United States
| | - Sharon Hammes-Schiffer
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520, United States
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17
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Pavošević F, Tao Z, Hammes-Schiffer S. Multicomponent Coupled Cluster Singles and Doubles with Density Fitting: Protonated Water Tetramers with Quantized Protons. J Phys Chem Lett 2021; 12:1631-1637. [PMID: 33555187 DOI: 10.1021/acs.jpclett.0c03771] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Nuclear quantum effects such as zero-point energy are important for describing a wide range of chemical properties. The nuclear-electronic orbital (NEO) approach incorporates such effects into quantum chemistry calculations by treating specified nuclei, typically protons, quantum mechanically on the same level as electrons. Herein, both the traditional and t1-transformed NEO coupled cluster with singles and doubles (NEO-CCSD) methods are implemented with a density fitting (DF) scheme for approximating the four-center two-particle integrals. The enhanced computational efficiency enables calculations on larger molecules with multiple quantum protons. The NEO-DF-CCSD method predicts proton affinities within chemical accuracy. Its application to protonated water tetramers with all nine protons treated quantum mechanically produces the qualitatively correct ordering of the isomer energies, which are strongly influenced by the zero-point energy contributions inherently included in NEO energy calculations. This work showcases the capabilities of the NEO-DF-CCSD method and provides the foundation for future developments and applications.
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Affiliation(s)
- Fabijan Pavošević
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520, United States
| | - Zhen Tao
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520, United States
| | - Sharon Hammes-Schiffer
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520, United States
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18
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Fajen OJ, Brorsen KR. Multicomponent CASSCF Revisited: Large Active Spaces Are Needed for Qualitatively Accurate Protonic Densities. J Chem Theory Comput 2021; 17:965-974. [PMID: 33404241 DOI: 10.1021/acs.jctc.0c01191] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Multicomponent methods seek to treat select nuclei, typically protons, fully quantum mechanically and equivalent to the electrons of a chemical system. In such methods, it is well-known that due to the neglect of electron-proton correlation, a Hartree-Fock (HF) description of the electron-proton interaction catastrophically fails leading to qualitatively incorrect protonic properties. In single-component quantum chemistry, the qualitative failure of HF is normally indicative of the need for multireference methods such as complete active space self-consistent field (CASSCF). While a multicomponent CASSCF method was implemented nearly 20 years ago, it is only able to perform calculations with very small active spaces (∼105 multicomponent configurations). Therefore, in order to extend the realm of applicability of the multicomponent CASSCF method, this study derives and implements a new two-step multicomponent CASSCF method that uses multicomponent heat-bath configuration interaction for the configuration interaction step, enabling calculations with very large active spaces (up to 16 electrons in 48 orbitals). We find that large electronic active spaces are needed to obtain qualitatively accurate protonic densities for the HCN and FHF- molecules. Additionally, the multicomponent CASSCF method implemented here should have further applications for double-well protonic potentials and systems that are inherently electronically multireference.
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Affiliation(s)
- O Jonathan Fajen
- Department of Chemistry, University of Missouri, Columbia, Missouri 65203, United States
| | - Kurt R Brorsen
- Department of Chemistry, University of Missouri, Columbia, Missouri 65203, United States
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Affiliation(s)
- Duy-Khoi Dang
- University of Michigan, 930 N University Ave., Ann Arbor, Michigan 48109, USA
| | - Paul M. Zimmerman
- University of Michigan, 930 N University Ave., Ann Arbor, Michigan 48109, USA
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20
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Sibaev M, Polyak I, Manby FR, Knowles PJ. Molecular second-quantized Hamiltonian: Electron correlation and non-adiabatic coupling treated on an equal footing. J Chem Phys 2020; 153:124102. [DOI: 10.1063/5.0018930] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022] Open
Affiliation(s)
- Marat Sibaev
- School of Chemistry, Cardiff University, Main Building, Park Place, Cardiff CF10 3AT, United Kingdom
| | - Iakov Polyak
- School of Chemistry, Cardiff University, Main Building, Park Place, Cardiff CF10 3AT, United Kingdom
| | - Frederick R. Manby
- School of Chemistry, University of Bristol, Cantock’s Close, Bristol BS8 1TS, United Kingdom
| | - Peter J. Knowles
- School of Chemistry, Cardiff University, Main Building, Park Place, Cardiff CF10 3AT, United Kingdom
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21
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Yu Q, Pavošević F, Hammes-Schiffer S. Development of nuclear basis sets for multicomponent quantum chemistry methods. J Chem Phys 2020; 152:244123. [PMID: 32610964 DOI: 10.1063/5.0009233] [Citation(s) in RCA: 43] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
The nuclear-electronic orbital (NEO) framework provides a practical approach for directly incorporating nuclear quantum effects and non-Born-Oppenheimer effects of specified nuclei, typically protons, into quantum chemistry calculations. Multicomponent wave function based methods, such as NEO coupled cluster singles and doubles, and multicomponent density functional theory (DFT), such as NEO-DFT, require the appropriate selection of electronic and nuclear basis sets. Although a wide array of electronic basis sets are available, systematically developed nuclear basis sets that balance accuracy and efficiency have been lacking. Herein, a series of nuclear basis sets are developed and shown to be accurate and efficient for describing both ground and excited state properties of multicomponent systems in which electrons and specified protons are treated quantum mechanically. Three series of Gaussian-type nuclear basis sets, denoted PB4, PB5, and PB6, are developed with varying levels of angular momentum. A machine-learning optimization procedure relying on the Gaussian process regression method is utilized to accelerate the optimization process. The basis sets are validated in terms of predictions of ground state energies, proton densities, proton affinities, and proton vibrational excitation energies, allowing the user to select the desired balance between accuracy and efficiency for the properties of interest. These nuclear basis sets will enhance the tractability of NEO methods for applications to a wide range of chemical systems.
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Affiliation(s)
- Qi Yu
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520, USA
| | - Fabijan Pavošević
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520, USA
| | - Sharon Hammes-Schiffer
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520, USA
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22
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Muolo A, Baiardi A, Feldmann R, Reiher M. Nuclear-electronic all-particle density matrix renormalization group. J Chem Phys 2020; 152:204103. [PMID: 32486651 DOI: 10.1063/5.0007166] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
Abstract
We introduce the Nuclear-Electronic All-Particle Density Matrix Renormalization Group (NEAP-DMRG) method for solving the time-independent Schrödinger equation simultaneously for electrons and other quantum species. In contrast to the already existing multicomponent approaches, in this work, we construct from the outset a multi-reference trial wave function with stochastically optimized non-orthogonal Gaussian orbitals. By iterative refining of the Gaussians' positions and widths, we obtain a compact multi-reference expansion for the multicomponent wave function. We extend the DMRG algorithm to multicomponent wave functions to take into account inter- and intra-species correlation effects. The efficient parameterization of the total wave function as a matrix product state allows NEAP-DMRG to accurately approximate the full configuration interaction energies of molecular systems with more than three nuclei and 12 particles in total, which is currently a major challenge for other multicomponent approaches. We present the NEAP-DMRG results for two few-body systems, i.e., H2 and H3 +, and one larger system, namely, BH3.
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Affiliation(s)
- Andrea Muolo
- ETH Zürich, Laboratory of Physical Chemistry, Vladimir-Prelog-Weg 2, 8093 Zürich, Switzerland
| | - Alberto Baiardi
- ETH Zürich, Laboratory of Physical Chemistry, Vladimir-Prelog-Weg 2, 8093 Zürich, Switzerland
| | - Robin Feldmann
- ETH Zürich, Laboratory of Physical Chemistry, Vladimir-Prelog-Weg 2, 8093 Zürich, Switzerland
| | - Markus Reiher
- ETH Zürich, Laboratory of Physical Chemistry, Vladimir-Prelog-Weg 2, 8093 Zürich, Switzerland
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Fajen OJ, Brorsen KR. Separation of electron–electron and electron–proton correlation in multicomponent orbital-optimized perturbation theory. J Chem Phys 2020; 152:194107. [DOI: 10.1063/5.0006743] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- O. Jonathan Fajen
- Department of Chemistry, University of Missouri, Columbia, Missouri 65203, USA
| | - Kurt R. Brorsen
- Department of Chemistry, University of Missouri, Columbia, Missouri 65203, USA
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24
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Pavošević F, Culpitt T, Hammes-Schiffer S. Multicomponent Quantum Chemistry: Integrating Electronic and Nuclear Quantum Effects via the Nuclear–Electronic Orbital Method. Chem Rev 2020; 120:4222-4253. [DOI: 10.1021/acs.chemrev.9b00798] [Citation(s) in RCA: 53] [Impact Index Per Article: 13.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Fabijan Pavošević
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520, United States
| | - Tanner Culpitt
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520, United States
| | - Sharon Hammes-Schiffer
- Department of Chemistry, Yale University, 225 Prospect Street, New Haven, Connecticut 06520, United States
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