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Tao J, Guo F, Sun Y, Sun X, Hu Y. Self-Assembled Nanotubes Based on Chiral H 8-BINOL Modified with 1,2,3-Triazole to Recognize Bi 3+ Efficiently by ICT Mechanism. MICROMACHINES 2024; 15:163. [PMID: 38276862 PMCID: PMC10821062 DOI: 10.3390/mi15010163] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2023] [Revised: 01/18/2024] [Accepted: 01/20/2024] [Indexed: 01/27/2024]
Abstract
A novel fluorescent "off" probe R-β-D-1 containing a 1,2,3-triazole moiety was obtained by the Click reaction with azidoglucose using H8-BINOL as a substrate, and the structure was characterized by 1H NMR and 13C NMR and ESI-MS analysis. The fluorescence properties of R-β-D-1 in methanol were investigated, and it was found that R-β-D-1 could be selectively fluorescently quenched by Bi3+ in the recognition of 19 metal ions and basic cations. The recognition process of Bi3+ by R-β-D-1 was also investigated by fluorescence spectroscopy, SEM, AFM, etc. The complex pattern of R-β-D-1 with Bi3+ was determined by Job's curve as 1 + 1, and the binding constant Ka of R-β-D-1 and Bi3+ was valued by the Benesi-Hildebrand equation as 1.01 × 104 M-1, indicating that the binding force of R-β-D-1 and Bi3+ was medium. The lowest detection limit (LOD) of the self-assembled H8-BINOL derivative for Bi3+ was up to 0.065 µM. The mechanism for the recognition of Bi3+ by the sensor R-β-D-1 may be the intramolecular charge transfer effect (ICT), which was attributed to the fact that the N-3 of the triazole readily serves as an electron acceptor while the incorporation of Bi3+ serves as an electron donor, and the two readily undergo coordination leading to the quenching of fluorescence. The recognition mechanism and recognition site could be verified by DFT calculation and CDD (Charge Density Difference).
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Affiliation(s)
- Jisheng Tao
- Jiangxi Key Laboratory of Organic Chemistry, Jiangxi Science and Technology Normal University, Nanchang 330013, China; (J.T.); (F.G.)
| | - Fang Guo
- Jiangxi Key Laboratory of Organic Chemistry, Jiangxi Science and Technology Normal University, Nanchang 330013, China; (J.T.); (F.G.)
| | - Yue Sun
- State Key Laboratory of Molecular Engineering of Polymers, Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials iChEM, Department of Chemistry, Fudan University, Shanghai 200433, China;
| | - Xiaoxia Sun
- Jiangxi Key Laboratory of Organic Chemistry, Jiangxi Science and Technology Normal University, Nanchang 330013, China; (J.T.); (F.G.)
| | - Yu Hu
- College of Chemistry, Nanchang University, Nanchang 330031, China
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Debia NP, Muller JM, Gonçalves PFB, Rodembusch FS, Lüdtke DS. Effective enantioselective recognition by steady-state fluorescence spectroscopy: Towards a paradigm shift to optical sensors with unusual chemical architecture. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2023; 294:122526. [PMID: 36868019 DOI: 10.1016/j.saa.2023.122526] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2022] [Revised: 02/17/2023] [Accepted: 02/18/2023] [Indexed: 06/18/2023]
Abstract
A series of amino acid-derived 1,2,3-triazoles presenting the amino acid residue and the benzazole fluorophore connected by a triazole-4-carboxylate spacer was studied for enantioselective recognition using only steady-state fluorescence spectroscopy in solution. In this investigation, the optical sensing was performed with D-(-) and L-(+)-Arabinose and (R)-(-) and (S)-(+)-Mandelic acid as chiral analytes. The optical sensors showed specific interactions with each pair of enantiomers, allowing photophysical responses, which were used for their enantioselective recognition. DFT calculations confirm the specific interaction between the fluorophores and the analytes corroborating the observed high enantioselectivity of these compounds with the studied enantiomers. Finally, this study investigated nontrivial sensors for chiral molecules by a mechanism different than turn-on fluorescence and has the potential to broad chiral compounds with fluorophoric units as optical sensors for enantioselective sensing.
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Affiliation(s)
- Natalí P Debia
- Instituto de Química, Universidade Federal do Rio Grande do Sul - UFRGS, Av. Bento Gonçalves 9500, 91501-970 Porto Alegre, RS, Brazil
| | - Jenifer M Muller
- Instituto de Química, Universidade Federal do Rio Grande do Sul - UFRGS, Av. Bento Gonçalves 9500, 91501-970 Porto Alegre, RS, Brazil
| | - Paulo F B Gonçalves
- Instituto de Química, Universidade Federal do Rio Grande do Sul - UFRGS, Av. Bento Gonçalves 9500, 91501-970 Porto Alegre, RS, Brazil
| | - Fabiano S Rodembusch
- Instituto de Química, Universidade Federal do Rio Grande do Sul - UFRGS, Av. Bento Gonçalves 9500, 91501-970 Porto Alegre, RS, Brazil.
| | - Diogo S Lüdtke
- Instituto de Química, Universidade Federal do Rio Grande do Sul - UFRGS, Av. Bento Gonçalves 9500, 91501-970 Porto Alegre, RS, Brazil.
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Zhang JQ, Yao GX, Yan YJ, Xu L, Zhang Y, Dong WK. Structurally characterized salamo-based mononuclear Cu(II) complex fluorogenic sensor with high selectivity for CN− and Cys-Cys. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.132772] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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Li J, Wang L, Yin L, Jiang X, Guo K, Zhang C, Yu S, Yu X, Wang Q. A Racemic Naphthyl-Coumarin-Based Probe for Quantitative Enantiomeric Excess Analysis of Amino Acids and Enantioselective Sensing of Amines and Amino Alcohols. ChemistryOpen 2022; 11:e202200088. [PMID: 35642171 PMCID: PMC9156809 DOI: 10.1002/open.202200088] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Revised: 04/28/2022] [Indexed: 11/18/2022] Open
Abstract
A new racemic naphthyl-coumarin-based probe was found to bind covalently with amino acids in MeOH-KOH system and thereby generates distinct CD responses. The induced strong CD signals allowed quantitative enantiomeric excess analysis of amino acids and enantioselective sensing of amines and amino alcohols. The mechanism for the reaction of the coumarin-aldehyde probe with an amino acid was investigated by CD, UV-Vis, NMR, ESI-MS analyses and ECD calculation.
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Affiliation(s)
- Jia‐Yi Li
- Department of Medicinal ChemistrySchool of PharmacySouthwest Medical UniversityLuzhouSichuan 646000P. R.China
| | - Li Wang
- Nuclear Medicine and Molecular Imaging Key Laboratory of Sichuan ProvinceLuzhouSichuan 646099P. R. China
- Department of Nuclear MedicineThe Affiliated Hospital of Southwest Medical UniversityLuzhouSichuan 646000P. R. China
| | - Li‐Ping Yin
- Department of Medicinal ChemistrySchool of PharmacySouthwest Medical UniversityLuzhouSichuan 646000P. R.China
- Nuclear Medicine and Molecular Imaging Key Laboratory of Sichuan ProvinceLuzhouSichuan 646099P. R. China
| | - Xin‐Meng Jiang
- Department of Medicinal ChemistrySchool of PharmacySouthwest Medical UniversityLuzhouSichuan 646000P. R.China
| | - Kai Guo
- Department of Medicinal ChemistrySchool of PharmacySouthwest Medical UniversityLuzhouSichuan 646000P. R.China
| | - Chun Zhang
- Department of Medicinal ChemistrySchool of PharmacySouthwest Medical UniversityLuzhouSichuan 646000P. R.China
| | - Shan‐Shan Yu
- Key Laboratory of Green Chemistry and TechnologyMinistry of EducationCollege of ChemistrySichuan UniversityChengduSichuan 610064P. R. China
| | - Xiao‐Qi Yu
- Key Laboratory of Green Chemistry and TechnologyMinistry of EducationCollege of ChemistrySichuan UniversityChengduSichuan 610064P. R. China
| | - Qin Wang
- Department of Medicinal ChemistrySchool of PharmacySouthwest Medical UniversityLuzhouSichuan 646000P. R.China
- Nuclear Medicine and Molecular Imaging Key Laboratory of Sichuan ProvinceLuzhouSichuan 646099P. R. China
- Dazhou Vocational College of Chinese MedicineDazhouSichuan 635000P. R. China
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Chen Z, Zeng P, Zhang S, Sun J. Recent Advances in Organic Synthesis of 3-Amino- or 4-Aminocoumarins. MINI-REV ORG CHEM 2022. [DOI: 10.2174/1570193x18666211001124004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
:
Coumarin is a privileged scaffold that contains the unique 2H-chromen-2-one motif, and its
derivatives are widely distributed in nature, especially in plants. In recent years, due to their diverse
pharmacological activities and remarkable photochemical properties, they have attracted significant
attention from scientists, which has also prompted the research on the synthesis approaches and the
availability of substrates for these compounds. This article is a brief description of the methods for the
synthesis of various coumarin derivatives via two- or multi-component reactions involving 3-amino
or 4-aminocoumarin reported during 2015-2021. This review may help expand the development of
various analogues with coumarin as the basic unit.
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Affiliation(s)
- Zhiwei Chen
- College of Pharmaceutical Sciences, Zhejiang University of Technology, and Institute of Drug Synthesis, Zhejiang University
of Technology, Hangzhou 310014, P.R. China
| | - Piaopiao Zeng
- College of Pharmaceutical Sciences, Zhejiang University of Technology, and Institute of Drug Synthesis, Zhejiang University
of Technology, Hangzhou 310014, P.R. China
| | - Shuo Zhang
- College of Pharmaceutical Sciences, Zhejiang University of Technology, and Institute of Drug Synthesis, Zhejiang University
of Technology, Hangzhou 310014, P.R. China
| | - Jie Sun
- College of Pharmaceutical Sciences, Zhejiang University of Technology, and Institute of Drug Synthesis, Zhejiang University
of Technology, Hangzhou 310014, P.R. China
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A ratiometric fluorescent probe for SO2 derivatives based on a new coumarin-hemicyanine dye in living cells. Microchem J 2022. [DOI: 10.1016/j.microc.2022.107233] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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Carneiro A, Matos MJ, Uriarte E, Santana L. Trending Topics on Coumarin and Its Derivatives in 2020. Molecules 2021; 26:501. [PMID: 33477785 PMCID: PMC7832358 DOI: 10.3390/molecules26020501] [Citation(s) in RCA: 62] [Impact Index Per Article: 20.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2020] [Revised: 01/15/2021] [Accepted: 01/15/2021] [Indexed: 12/24/2022] Open
Abstract
Coumarins are naturally occurring molecules with a versatile range of activities. Their structural and physicochemical characteristics make them a privileged scaffold in medicinal chemistry and chemical biology. Many research articles and reviews compile information on this important family of compounds. In this overview, the most recent research papers and reviews from 2020 are organized and analyzed, and a discussion on these data is included. Multiple electronic databases were scanned, including SciFinder, Mendeley, and PubMed, the latter being the main source of information. Particular attention was paid to the potential of coumarins as an important scaffold in drug design, as well as fluorescent probes for decaging of prodrugs, metal detection, and diagnostic purposes. Herein we do an analysis of the trending topics related to coumarin and its derivatives in the broad field of drug discovery.
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Affiliation(s)
- Aitor Carneiro
- Departamento de Química Orgánica, Facultade de Farmacia, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain; (A.C.); (M.J.M.); (E.U.)
| | - Maria João Matos
- Departamento de Química Orgánica, Facultade de Farmacia, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain; (A.C.); (M.J.M.); (E.U.)
- CIQUP/Department of Chemistry and Biochemistry, Faculty of Sciences, University of Porto, Rua Campo Alegre 687, 4169-007 Porto, Portugal
| | - Eugenio Uriarte
- Departamento de Química Orgánica, Facultade de Farmacia, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain; (A.C.); (M.J.M.); (E.U.)
- Instituto de Ciencias Químicas Aplicadas, Universidad Autónoma de Chile, 7500912 Santiago, Chile
| | - Lourdes Santana
- Departamento de Química Orgánica, Facultade de Farmacia, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain; (A.C.); (M.J.M.); (E.U.)
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Xiao Y, Guo K, Wei J, Gao X, Yi D, Li Y, Yu X, Zhang C, Wang Q. Selective detection of Cys and GSH by using one fluorescent probe at two excitation wavelengths. Tetrahedron Lett 2020. [DOI: 10.1016/j.tetlet.2020.152462] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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9
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Pu L. Enantioselective Fluorescent Recognition of Free Amino Acids: Challenges and Opportunities. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202003969] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Lin Pu
- Department of Chemistry University of Virginia Charlottesville Virginia 22904 USA
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10
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Pu L. Enantioselective Fluorescent Recognition of Free Amino Acids: Challenges and Opportunities. Angew Chem Int Ed Engl 2020; 59:21814-21828. [PMID: 32602243 DOI: 10.1002/anie.202003969] [Citation(s) in RCA: 66] [Impact Index Per Article: 16.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2020] [Revised: 05/08/2020] [Indexed: 02/02/2023]
Abstract
Fluorescent probes that can discriminate enantiomers of amino acids in organic media or aqueous solution are discussed. This Minireview focuses on recent progress in the studies of three classes of probes including those made of cyclodextrins, 1,1'-binaphthyl compounds, and nanomaterials, and uses them to illustrate the design strategies, applications, and limitations in this area. These probes are potentially useful for rapid analysis of asymmetric reactions for amino acid synthesis as well as the real-time imaging of amino acids in biological systems. The challenges in these applications are analyzed. Working in this field of enantioselective fluorescent recognition of amino acids offers great opportunities to make new scientific discoveries and to develop important practical applications.
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Affiliation(s)
- Lin Pu
- Department of Chemistry, University of Virginia, Charlottesville, Virginia, 22904, USA
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