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Zanakhov TO, Galenko EE, Novikov MS, Khlebnikov AF. Divergent Diazo Approach toward Alkyl 5/4-Hydroxy-3 H-benzo[ e]indole-4/5-carboxylates. J Org Chem 2023; 88:13191-13204. [PMID: 37672038 DOI: 10.1021/acs.joc.3c01413] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/07/2023]
Abstract
A divergent diazo approach toward alkyl 5/4-hydroxy-3H-benzo[e]indole-4/5-carboxylates has been developed. The reaction of 1,3-diketones with alkyl 2-diazo-3-oxo-3-(2H-azirin-2-yl)propanoates catalyzed by Co(acac)3 or Ni(acac)2 gives various alkyl 3-(1H-pyrrol-2-yl)-2-diazo-3-oxopropanoate in good yields. The latter undergo Wolff rearrangement followed by the 6π-cyclization of transient ketene to form alkyl 5-hydroxy-3H-benzo[e]indole-4-carboxylates bearing various substituents in positions 1, 2, 7, and 8, as well as derivatives of methyl 4-hydroxy-6H-thieno[2,3-e]indole-5-carboxylates and methyl 5-hydroxy-7H-benzo[c]carbazole-6-carboxylate under thermolysis or Rh2(OAc)4 catalysis. Isomeric benzoindoles, alkyl 4-hydroxy-3H-benzo[e]indole-5-carboxylates, have been prepared by Boc-protection of the pyrrole nitrogen of alkyl 3-(1H-pyrrol-2-yl)-2-diazo-3-oxopropanoates followed by an intramolecular formal carbene insertion into the aromatic C-H bond catalyzed by Cu(OTf)2. The hydroxyl group of alkyl 5/4-hydroxy-3H-benzo[e]indole-4/5-carboxylates, through the formation of the corresponding triflates, allows the introduction of various substituents into the 5/4 position of benzo[e]indoles using the cross-coupling reaction and even form a new heterocyclic backbone, benzo[k]pyrrolo[2,3-i]phenanthridine, via a tandem Suzuki reaction/nucleophilic acyl substitution.
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Affiliation(s)
- Timur O Zanakhov
- Institute of Chemistry, Saint Petersburg State University, 7/9 Universitetskaya Naberezhnaya, St. Petersburg 199034, Russia
| | - Ekaterina E Galenko
- Institute of Chemistry, Saint Petersburg State University, 7/9 Universitetskaya Naberezhnaya, St. Petersburg 199034, Russia
| | - Mikhail S Novikov
- Institute of Chemistry, Saint Petersburg State University, 7/9 Universitetskaya Naberezhnaya, St. Petersburg 199034, Russia
| | - Alexander F Khlebnikov
- Institute of Chemistry, Saint Petersburg State University, 7/9 Universitetskaya Naberezhnaya, St. Petersburg 199034, Russia
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Zanakhov TO, Galenko EE, Novikov MS, Khlebnikov AF. Diazo Strategy for Intramolecular Azirine Ring Expansion: Rh(II)-Catalyzed Synthesis of 2-Hydroxy-3-oxo-2,3-dihydro-1 H-pyrrole-2-carboxylates. J Org Chem 2022; 87:15598-15607. [DOI: 10.1021/acs.joc.2c02177] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Timur O. Zanakhov
- Institute of Chemistry, Saint Petersburg State University, 7/9 Universitetskaya Naberezhnaya, St. Petersburg 199034, Russia
| | - Ekaterina E. Galenko
- Institute of Chemistry, Saint Petersburg State University, 7/9 Universitetskaya Naberezhnaya, St. Petersburg 199034, Russia
| | - Mikhail S. Novikov
- Institute of Chemistry, Saint Petersburg State University, 7/9 Universitetskaya Naberezhnaya, St. Petersburg 199034, Russia
| | - Alexander F. Khlebnikov
- Institute of Chemistry, Saint Petersburg State University, 7/9 Universitetskaya Naberezhnaya, St. Petersburg 199034, Russia
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Lougee MG, Pagar VV, Kim HJ, Pancoe SX, Chia WK, Mach RH, Garcia BA, Petersson EJ. Harnessing the intrinsic photochemistry of isoxazoles for the development of chemoproteomic crosslinking methods. Chem Commun (Camb) 2022; 58:9116-9119. [PMID: 35880535 PMCID: PMC9922157 DOI: 10.1039/d2cc02263j] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
The intrinsic photochemistry of the isoxazole, a common heterocycle in medicinal chemistry, can be applied to offer an alternative to existing strategies using more perturbing, extrinsic photo-crosslinkers. The utility of isoxazole photo-crosslinking is demonstrated in a wide range of biologically relevant experiments, including common proteomics workflows.
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Affiliation(s)
- Marshall G. Lougee
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
| | - Vinayak Vishnu Pagar
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania, 19104, USA. .,Department of Radiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, 19104, USA
| | - Hee Jong Kim
- Department of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104
| | - Samantha X. Pancoe
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
| | - W. Kit Chia
- Department of Radiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
| | - Robert H. Mach
- Department of Radiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
| | - Benjamin A. Garcia
- Department of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania 19104
| | - E. James Petersson
- Department of Chemistry, University of Pennsylvania, Philadelphia, Pennsylvania 19104, USA
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Galenko EE, Puzyk AM, Novikov MS, Khlebnikov AF. An Isoxazole Strategy for Molybdenum-Mediated Synthesis of 5-Mono- and 4,5-Disubstituted 1 H-Pyrrole-2,3-diones. J Org Chem 2022; 87:6459-6470. [PMID: 35420424 DOI: 10.1021/acs.joc.2c00386] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
The synthesis of 5-aryl- and 4-aryl/hetaryl/cyclopropyl/alkynyl-5-aryl-1H-pyrrole-2,3-diones by formal isomerization of isoxazole-5-carbaldehydes mediated Mo(CO)6 in wet MeCN has been developed. The resulting 1H-pyrrole-2,3-diones are good precursors for substituted 1H-pyrrolo[2,3-b]quinoxalines.
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Affiliation(s)
- Ekaterina E Galenko
- Saint Petersburg State University, Institute of Chemistry, 7/9 Universitetskaya Naberezhnaya, St. Petersburg 199034, Russia
| | - Aleksandra M Puzyk
- Saint Petersburg State University, Institute of Chemistry, 7/9 Universitetskaya Naberezhnaya, St. Petersburg 199034, Russia
| | - Mikhail S Novikov
- Saint Petersburg State University, Institute of Chemistry, 7/9 Universitetskaya Naberezhnaya, St. Petersburg 199034, Russia
| | - Alexander F Khlebnikov
- Saint Petersburg State University, Institute of Chemistry, 7/9 Universitetskaya Naberezhnaya, St. Petersburg 199034, Russia
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Galenko EE, Kryukova MA, Novikov MS, Khlebnikov AF. An Isoxazole Strategy for the Synthesis of Fully Substituted Nicotinates. J Org Chem 2021; 86:6888-6896. [PMID: 33847124 DOI: 10.1021/acs.joc.1c00286] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
A four-step quasi one-pot procedure for the preparation of fully substituted nicotinates from ketone enamines and 4-methylideneisoxazol-5-ones has been developed. The reaction sequence involves (1) reaction of 4-methylideneisoxazol-5-ones with ketone enamines with the formation of isoxazole-5-ols, (2) their O-methylation with diazomethane, (3) hydrogenative cleavage of the O-N bond in 5-methoxyisoxazoles under action of Mo(CO)6/H2O and simultaneous isomerization and condensation of the formed enamines, with the formation of dihydropyridines, and (4) aromatization of the latter.
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Affiliation(s)
- Ekaterina E Galenko
- Saint Petersburg State University, Institute of Chemistry, 7/9 Universitetskaya Naberezhnaya, St. Petersburg 199034, Russia
| | - Mariya A Kryukova
- Saint Petersburg State University, Institute of Chemistry, 7/9 Universitetskaya Naberezhnaya, St. Petersburg 199034, Russia
| | - Mikhail S Novikov
- Saint Petersburg State University, Institute of Chemistry, 7/9 Universitetskaya Naberezhnaya, St. Petersburg 199034, Russia
| | - Alexander F Khlebnikov
- Saint Petersburg State University, Institute of Chemistry, 7/9 Universitetskaya Naberezhnaya, St. Petersburg 199034, Russia
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Serebryannikova AV, Galenko EE, Novikov MS, Khlebnikov AF. Product selectivity of thermal Buchner reaction of methyl 2-(3-arylisoxazol-5-yl)-2-diazoacetates with benzene, naphthalene and mesitylene, and ring-opening/closing reaction of products. Tetrahedron 2021. [DOI: 10.1016/j.tet.2021.132153] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Zanakhov TO, Galenko EE, Kryukova MA, Novikov MS, Khlebnikov AA. Isomerization of 5-(2 H-Azirin-2-yl)oxazoles: An Atom-Economic Approach to 4 H-Pyrrolo[2,3- d]oxazoles. Molecules 2021; 26:molecules26071881. [PMID: 33810476 PMCID: PMC8036974 DOI: 10.3390/molecules26071881] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2021] [Revised: 03/19/2021] [Accepted: 03/23/2021] [Indexed: 11/16/2022] Open
Abstract
An atom economical method for the preparation of variously substituted 4H-pyrrolo[2,3-d]oxazoles was developed on the basis of thermal isomerization of 5-(2H-azirin-2-yl)oxazoles. The latter were prepared by Rh2(oct)4 catalyzed reaction of 2-(3-aryl/heteroaryl)-2-diazoacetyl-2H-azirines with a set of substituted acetonitriles, benzonitriles, acrylonitrile and fumaronitrile. According to DFT calculations the transformation of 5-(2H-azirin-2-yl)oxazole to 4H-pyrrolo[2,3-d]oxazole occurs through the nitrenoid-like transition state to give a 3aH-pyrrolo[2,3-d]oxazole intermediate, followed by 1,5-H-shift.
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