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Dada L, Colomer JP, Manzano VE, Varela O. Synthesis of thiodisaccharides related to 4-thiolactose. Specific structural modifications increase the inhibitory activity against E. coli β-galactosidase. Org Biomol Chem 2023; 21:2188-2203. [PMID: 36806338 DOI: 10.1039/d2ob02301f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/16/2023]
Abstract
In the search for new glycosidase inhibitors, a set of benzyl β-D-Gal-S-(1→4)-3-deoxy-4-thio-α-D-hexopyranosides was synthesized. Diverse configurations were installed at C-2 and C-4 of the glucose residue. The benzyl glycosidic group was kept intact or substituted by an electron-donating or electron-withdrawing group that could also participate in hydrogen bonding. All thiodisaccharides were found to be inhibitors of E. coli β-galactosidase. In general, benzyl thiodisaccharides were better inhibitors than those substituted (NO2 or NH2) on the benzyl ring. Thiodisaccharides containing a hexopyranoside, instead of a pentopyranoside, showed a weaker inhibitory activity, except for those having the α-D-xylo configuration, which exhibited inhibition constants of the same order of magnitude. These and previous results indicated that the inhibition process by thiodisaccharides is strongly dependent on the configuration of the 3-deoxy-4-thiopyranoside, as well as its substitution pattern (such as the presence of a benzyl glycoside). The enzyme-inhibitor interaction during the hydrolysis process involves a conformational selection resulting from rotation around the thioglycosidic bond and the flexibility of the terminal six-membered ring. Thus, the mentioned structural features of the inhibitor could give rise to favorable ground state conformations for the interaction with the enzyme, similar to those found for selected thiodisaccharides in the bound state. These studies demonstrated that the performance of thiodisaccharides as enzyme inhibitors could be increased by selecting the appropriate configuration and substitution of the hexopyranoside replacing the glucose moiety of 4-thiolactose.
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Affiliation(s)
- Lucas Dada
- Universidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Orgánica, Ciudad Universitaria, Pabellón 2, C1428EHA, Buenos Aires, Argentina. .,Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)-UBA, Centro de Investigación en Hidratos de Carbono (CIHIDECAR)
| | - Juan Pablo Colomer
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)-UNC, Instituto de Investigaciones en Fisico-Química de Córdoba (INFIQC).,Departamento de Química Orgánica, Facultad de Ciencias Químicas, Universidad Nacional de Córdoba, Ciudad Universitaria, Edificio de Ciencias II, Córdoba, Argentina
| | - Verónica E Manzano
- Universidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Orgánica, Ciudad Universitaria, Pabellón 2, C1428EHA, Buenos Aires, Argentina. .,Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)-UBA, Centro de Investigación en Hidratos de Carbono (CIHIDECAR)
| | - Oscar Varela
- Universidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Departamento de Química Orgánica, Ciudad Universitaria, Pabellón 2, C1428EHA, Buenos Aires, Argentina. .,Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)-UBA, Centro de Investigación en Hidratos de Carbono (CIHIDECAR)
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Azomethine Ylides-Versatile Synthons for Pyrrolidinyl-Heterocyclic Compounds. Molecules 2023; 28:molecules28020668. [PMID: 36677727 PMCID: PMC9866015 DOI: 10.3390/molecules28020668] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2022] [Revised: 01/03/2023] [Accepted: 01/04/2023] [Indexed: 01/11/2023] Open
Abstract
Azomethine ylides are nitrogen-based three-atom components commonly used in [3+2]-cycloaddition reactions with various unsaturated 2π-electron components. These reactions are highly regio- and stereoselective and have attracted the attention of organic chemists with respect to the construction of diverse heterocycles potentially bearing four new contiguous stereogenic centers. This review article complies the most important [3+2]-cycloaddition reactions of azomethine ylides with various olefinic, unsaturated 2π-electron components (acyclic, alicyclic, heterocyclic, and exocyclic ones) reported over the past two decades.
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Vardé M, Marino C, Repetto E, Varela OJ. Enantioselective Synthesis of 2,3,4,5‐Tetra(hydroxyalkyl)pyrrolidines through 1,3‐Dipolar Cycloadditions. European J Org Chem 2022. [DOI: 10.1002/ejoc.202200589] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Mariana Vardé
- Universidad de Buenos Aires Facultad de Ciencias Exactas y Naturales Organic chemistry ARGENTINA
| | - Carla Marino
- Universidad de Buenos Aires Facultad de Ciencias Exactas y Naturales Organic chemistry ARGENTINA
| | - Evangelina Repetto
- Universidad de Buenos Aires Facultad de Ciencias Exactas y Naturales Organic chemistry ARGENTINA
| | - Oscar Jose Varela
- Facultad de Ciencias Exactas y Naturales Universidad de Buenos Aires Organic Chemistry Pabellon 2, Ciudad Universitaria 1428 Buenos Aires ARGENTINA
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Dada L, Manzano VE, Varela O. Benzyl Glycosides of Thiodisaccharides. Influence of C‐2 Configuration of the Reducing End and Substitution at Benzyl on the Inhibition of the
E. coli
β‐Galactosidase. ChemistrySelect 2021. [DOI: 10.1002/slct.202103461] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Lucas Dada
- Universidad de Buenos Aires Facultad de Ciencias Exactas y Naturales Departamento de Química Orgánica. Ciudad Universitaria, Pabellón 2 C1428EHA Buenos Aires Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)-UBA, Centro de Investigación en Hidratos de Carbono (CIHIDECAR)
| | - Verónica E. Manzano
- Universidad de Buenos Aires Facultad de Ciencias Exactas y Naturales Departamento de Química Orgánica. Ciudad Universitaria, Pabellón 2 C1428EHA Buenos Aires Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)-UBA, Centro de Investigación en Hidratos de Carbono (CIHIDECAR)
| | - Oscar Varela
- Universidad de Buenos Aires Facultad de Ciencias Exactas y Naturales Departamento de Química Orgánica. Ciudad Universitaria, Pabellón 2 C1428EHA Buenos Aires Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)-UBA, Centro de Investigación en Hidratos de Carbono (CIHIDECAR)
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Repetto E, Oliveira Udry GA, Varela O. Intramolecular azide-alkene cycloaddition-elimination reaction in an aldohex-2-enonic acid derivative. Carbohydr Res 2019; 483:107751. [DOI: 10.1016/j.carres.2019.107751] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2019] [Revised: 07/18/2019] [Accepted: 07/22/2019] [Indexed: 10/26/2022]
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6
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Synthesis of enantiomerically pure enones (2-benzyloxypyran-3-ones) derived from pentoses. Carbohydr Res 2019; 479:31-40. [DOI: 10.1016/j.carres.2019.05.005] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2019] [Revised: 05/02/2019] [Accepted: 05/15/2019] [Indexed: 01/19/2023]
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7
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Synthesis of pyrano[3,4-c]pyrroles (microreview). Chem Heterocycl Compd (N Y) 2018. [DOI: 10.1007/s10593-018-2312-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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8
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Udry GAO, Repetto E, Vega DR, Varela O. Synthesis of Highly Substituted and Enantiomerically Pure 2,3,4-Tris(hydroxyalkyl)pyrrolidines Using a 1,3-Dipolar Cycloaddition Reaction as Key Step. ChemistrySelect 2017. [DOI: 10.1002/slct.201701068] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Guillermo A. Oliveira Udry
- Universidad de Buenos Aires.; Facultad de Ciencias Exactas y Naturales. Departamento de Química Orgánica.; Pabellón 2, Ciudad Universitaria C1428EHA - Buenos Aires Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)-UBA.; Centro de Investigación en Hidratos de Carbono (CIHIDECAR).; Buenos Aires Argentina
| | - Evangelina Repetto
- Universidad de Buenos Aires.; Facultad de Ciencias Exactas y Naturales. Departamento de Química Orgánica.; Pabellón 2, Ciudad Universitaria C1428EHA - Buenos Aires Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)-UBA.; Centro de Investigación en Hidratos de Carbono (CIHIDECAR).; Buenos Aires Argentina
| | - Daniel R. Vega
- Departamento Física de la Materia Condensada; GAIyANN-CAC-CNEA and ECyT-UNSAM; Av. Gral. Paz 1499-1650. San Martín - Buenos Aires Argentina
| | - Oscar Varela
- Universidad de Buenos Aires.; Facultad de Ciencias Exactas y Naturales. Departamento de Química Orgánica.; Pabellón 2, Ciudad Universitaria C1428EHA - Buenos Aires Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET)-UBA.; Centro de Investigación en Hidratos de Carbono (CIHIDECAR).; Buenos Aires Argentina
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Gerosa GG, Grimblat N, Spanevello RA, Suárez AG, Sarotti AM. Mechanistic insight into the acid-catalyzed isomerization of biomass-derived polysubstituted pyrrolidines: an experimental and DFT study. Org Biomol Chem 2017; 15:426-434. [DOI: 10.1039/c6ob02457b] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The mechanism of the acid-catalyzed isomerization of polysubstituted pyrrolidines was unravelled by a combination of experimental, spectroscopic and computational studies.
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Affiliation(s)
- Gabriela G. Gerosa
- Instituto de Química Rosario (CONICET)
- Facultad de Ciencias Bioquímicas y Farmacéuticas
- Universidad Nacional de Rosario
- Rosario 2000
- Argentina
| | - Nicolás Grimblat
- Instituto de Química Rosario (CONICET)
- Facultad de Ciencias Bioquímicas y Farmacéuticas
- Universidad Nacional de Rosario
- Rosario 2000
- Argentina
| | - Rolando A. Spanevello
- Instituto de Química Rosario (CONICET)
- Facultad de Ciencias Bioquímicas y Farmacéuticas
- Universidad Nacional de Rosario
- Rosario 2000
- Argentina
| | - Alejandra G. Suárez
- Instituto de Química Rosario (CONICET)
- Facultad de Ciencias Bioquímicas y Farmacéuticas
- Universidad Nacional de Rosario
- Rosario 2000
- Argentina
| | - Ariel M. Sarotti
- Instituto de Química Rosario (CONICET)
- Facultad de Ciencias Bioquímicas y Farmacéuticas
- Universidad Nacional de Rosario
- Rosario 2000
- Argentina
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