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Matsugi A, Suzuki S. Ring Growth Mechanism in the Reaction between Fulvenallenyl and Cyclopentadienyl Radicals. J Phys Chem A 2024; 128:1327-1338. [PMID: 38351621 DOI: 10.1021/acs.jpca.3c07441] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/23/2024]
Abstract
Recombination between resonance-stabilized hydrocarbon radicals is an important class of reactions that contribute to molecular growth chemistry in combustion. In the present study, the ring growth mechanism in the reaction between fulvenallenyl (C7H5) and cyclopentadienyl (C5H5) radicals is investigated computationally. The reaction pathways are explored by quantum chemical calculations, and the phenomenological and steady-state rate constants are determined by solving the multiple-well master equations. The primary reaction routes following the recombination between the two radicals are found to be as follows: formation of the adducts, isomerization by hydrogen shift reactions, cyclization to form tricyclic compounds, and their isomerization and dissociation reactions, leading to the formation of acenaphthylene. The overall process can be approximately represented as C7H5 + C5H5 → acenaphthylene + 2H with the bimolecular rate constant of about 4 × 10-12 cm3 molecule-1 s-1. A reaction mechanism consisting of 20 reactions, including the formation, isomerization, and dissociation processes of major intermediate species, is proposed for use in kinetic modeling.
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Affiliation(s)
- Akira Matsugi
- Research Institute of Science for Safety and Sustainability, National Institute of Advanced Industrial Science and Technology (AIST), 16-1 Onogawa, Tsukuba 305-8569, Japan
| | - Shunsuke Suzuki
- Research Institute for Energy Conversion, National Institute of Advanced Industrial Science and Technology (AIST), 1-2-1 Namiki, Tsukuba 305-8564, Japan
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2
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Yang Z, Galimova GR, He C, Goettl SJ, Paul D, Lu W, Ahmed M, Mebel AM, Li X, Kaiser RI. Gas-phase formation of the resonantly stabilized 1-indenyl (C 9H 7•) radical in the interstellar medium. SCIENCE ADVANCES 2023; 9:eadi5060. [PMID: 37682989 PMCID: PMC10491290 DOI: 10.1126/sciadv.adi5060] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/02/2023] [Accepted: 08/07/2023] [Indexed: 09/10/2023]
Abstract
The 1-indenyl (C9H7•) radical, a prototype aromatic and resonantly stabilized free radical carrying a six- and a five-membered ring, has emerged as a fundamental molecular building block of nonplanar polycyclic aromatic hydrocarbons (PAHs) and carbonaceous nanostructures in deep space and combustion systems. However, the underlying formation mechanisms have remained elusive. Here, we reveal an unconventional low-temperature gas-phase formation of 1-indenyl via barrierless ring annulation involving reactions of atomic carbon [C(3P)] with styrene (C6H5C2H3) and propargyl (C3H3•) with phenyl (C6H5•). Macroscopic environments like molecular clouds act as natural low-temperature laboratories, where rapid molecular mass growth to 1-indenyl and subsequently complex PAHs involving vinyl side-chained aromatics and aryl radicals can occur. These reactions may account for the formation of PAHs and their derivatives in the interstellar medium and carbonaceous chondrites and could close the gap of timescales of their production and destruction in our carbonaceous universe.
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Affiliation(s)
- Zhenghai Yang
- Department of Chemistry, University of Hawaii at Manoa, 2545 McCarthy Mall, Honolulu, HI 96822, USA
| | - Galiya R. Galimova
- Department of Chemistry and Biochemistry, Florida International University, Miami, FL 33199, USA
| | - Chao He
- Department of Chemistry, University of Hawaii at Manoa, 2545 McCarthy Mall, Honolulu, HI 96822, USA
| | - Shane J. Goettl
- Department of Chemistry, University of Hawaii at Manoa, 2545 McCarthy Mall, Honolulu, HI 96822, USA
| | - Dababrata Paul
- Department of Chemistry, University of Hawaii at Manoa, 2545 McCarthy Mall, Honolulu, HI 96822, USA
| | - Wenchao Lu
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
| | - Musahid Ahmed
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
| | - Alexander M. Mebel
- Department of Chemistry and Biochemistry, Florida International University, Miami, FL 33199, USA
| | - Xiaohu Li
- Xinjiang Astronomical Observatory, Chinese Academy of Sciences, Urumqi, Xinjiang 830011, P. R. China
- Key Laboratory of Radio Astronomy, Chinese Academy of Sciences, Urumqi, Xinjiang 830011, P. R. China
| | - Ralf I. Kaiser
- Department of Chemistry, University of Hawaii at Manoa, 2545 McCarthy Mall, Honolulu, HI 96822, USA
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He C, Kaiser RI, Lu W, Ahmed M, Reyes Y, Wnuk SF, Mebel AM. Exotic Reaction Dynamics in the Gas-Phase Preparation of Anthracene (C 14H 10) via Spiroaromatic Radical Transients in the Indenyl-Cyclopentadienyl Radical-Radical Reaction. J Am Chem Soc 2023; 145:3084-3091. [PMID: 36701838 DOI: 10.1021/jacs.2c12045] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
The gas-phase reaction between the 1-indenyl (C9H7•) radical and the cyclopentadienyl (C5H5•) radical has been investigated for the first time using synchrotron-based mass spectrometry coupled with a pyrolytic reactor. Soft photoionization with tunable vacuum ultraviolet photons afforded for the isomer-selective identification of the production of phenanthrene, anthracene, and benzofulvalene (C14H10). The classical theory prevalent in the literature proposing that radicals combine only at their specific radical centers is challenged by our discovery of an unusual reaction pathway that involves a barrierless combination of a resonantly stabilized hydrocarbon radical with an aromatic radical at the carbon atom adjacent to the traditional C1 radical center; this unconventional addition is followed by substantial isomerization into phenanthrene and anthracene via a category of exotic spiroaromatic intermediates. This result leads to a deeper understanding of the evolution of the cosmic carbon budget and provides new methodologies for the bottom-up synthesis of unique spiroaromatics that may be relevant for the synthesis of more complex aromatic carbon skeletons in deep space.
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Affiliation(s)
- Chao He
- Department of Chemistry, University of Hawai'i at Manoa, Honolulu, Hawaii 96822, United States
| | - Ralf I Kaiser
- Department of Chemistry, University of Hawai'i at Manoa, Honolulu, Hawaii 96822, United States
| | - Wenchao Lu
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Musahid Ahmed
- Chemical Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
| | - Yahaira Reyes
- Department of Chemistry and Biochemistry, Florida International University, Miami, Florida 33199, United States
| | - Stanislaw F Wnuk
- Department of Chemistry and Biochemistry, Florida International University, Miami, Florida 33199, United States
| | - Alexander M Mebel
- Department of Chemistry and Biochemistry, Florida International University, Miami, Florida 33199, United States
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4
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Gao H, Tang H. Temperature Effect on Formation of Polycyclic Aromatic Hydrocarbons in Acetylene Pyrolysis. ChemistrySelect 2022. [DOI: 10.1002/slct.202201893] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- He Gao
- College of Energy and Power Engineering Nanjing University of Aeronautics and Astronautics 29-Yudao St. Nanjing 210016, Jiangsu Province China
| | - Hao Tang
- College of Energy and Power Engineering Nanjing University of Aeronautics and Astronautics 29-Yudao St. Nanjing 210016, Jiangsu Province China
- Aero-engine Thermal Environment and Structure Key Laboratory of Ministry of Industry and Information Technology Nanjing University of Aeronautics and Astronautics Nanjing 210016, Jiangsu Province China
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Spiekermann K, Pattanaik L, Green WH. High accuracy barrier heights, enthalpies, and rate coefficients for chemical reactions. Sci Data 2022; 9:417. [PMID: 35851390 PMCID: PMC9293986 DOI: 10.1038/s41597-022-01529-6] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2022] [Accepted: 06/30/2022] [Indexed: 12/13/2022] Open
Abstract
Quantitative chemical reaction data, including activation energies and reaction rates, are crucial for developing detailed kinetic mechanisms and accurately predicting reaction outcomes. However, such data are often difficult to find, and high-quality datasets are especially rare. Here, we use CCSD(T)-F12a/cc-pVDZ-F12//ωB97X-D3/def2-TZVP to obtain high-quality single point calculations for nearly 22,000 unique stable species and transition states. We report the results from these quantum chemistry calculations and extract the barrier heights and reaction enthalpies to create a kinetics dataset of nearly 12,000 gas-phase reactions. These reactions involve H, C, N, and O, contain up to seven heavy atoms, and have cleaned atom-mapped SMILES. Our higher-accuracy coupled-cluster barrier heights differ significantly (RMSE of ∼5 kcal mol−1) relative to those calculated at ωB97X-D3/def2-TZVP. We also report accurate transition state theory rate coefficients \documentclass[12pt]{minimal}
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\begin{document}$${k}_{\infty }(T)$$\end{document}k∞(T) between 300 K and 2000 K and the corresponding Arrhenius parameters for a subset of rigid reactions. We believe this data will accelerate development of automated and reliable methods for quantitative reaction prediction. Measurement(s) | Barrier Heights • Enthalpies • Rate Coefficients | Technology Type(s) | ab initio quantum chemistry computational method |
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Affiliation(s)
- Kevin Spiekermann
- Department of Chemical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Ave, Cambridge, MA, 02139, USA
| | - Lagnajit Pattanaik
- Department of Chemical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Ave, Cambridge, MA, 02139, USA
| | - William H Green
- Department of Chemical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Ave, Cambridge, MA, 02139, USA.
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Yu H, Tian Y, Wang S, Ke X, Li R, Kang X. Ferrate(VI) Oxidation Mechanism of Substituted Anilines: A Density Functional Theory Investigation. ACS OMEGA 2021; 6:14317-14326. [PMID: 34124455 PMCID: PMC8190916 DOI: 10.1021/acsomega.1c01134] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/02/2021] [Accepted: 05/12/2021] [Indexed: 06/12/2023]
Abstract
Ferrate(VI) (Fe(VI)) is a promising oxidant coagulant and disinfectant for the degradation of organic micropollutants. However, it is hard to elucidate the detailed oxidation mechanism through the current experimental approaches. Substituted anilines (SANs) are important chemical compounds that are widely used in many industries. This paper presents the use of density functional theory (DFT) to understand the oxidation mechanism of SANs by Fe(VI) and the effect of substituents. The calculation results revealed that the primary oxidations of SANs follow the hydrogen atom transfer (HAT) mechanism. Interestingly, the hydroxyl oxygen of HFeO4 - is more reactive than the carbonyl oxygen when reacting with SANs. The formation of the SAN radical is crucial, and all of the products are formed from it. Azobenzene is more favorable to generate the above products. In addition, the obtained results indicate that this kind of substituent has a much greater influence on the reaction rather than the position. Thus, the present study provides a valuable insight into the transformation pathways of SANs in the Fe(VI) oxidation process and the effects of the substituent on oxidation. These results will advance the understanding of Fe(VI) involved in wastewater treatment.
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Affiliation(s)
- Hang Yu
- Liaoning
Key Laboratory of Clean Energy and College of Energy and Environment, Shenyang Aerospace University, Shenyang, Liao Ning 110136, China
| | - Yu Tian
- Liaoning
Key Laboratory of Clean Energy and College of Energy and Environment, Shenyang Aerospace University, Shenyang, Liao Ning 110136, China
| | - Shuyue Wang
- Liaoning
Key Laboratory of Clean Energy and College of Energy and Environment, Shenyang Aerospace University, Shenyang, Liao Ning 110136, China
| | - Xin Ke
- Liaoning
Key Laboratory of Clean Energy and College of Energy and Environment, Shenyang Aerospace University, Shenyang, Liao Ning 110136, China
| | - Rundong Li
- Liaoning
Key Laboratory of Clean Energy and College of Energy and Environment, Shenyang Aerospace University, Shenyang, Liao Ning 110136, China
| | - Xiaohui Kang
- College
of Pharmacy, Dalian Medical University, Dalian 116044, China
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Sundar SP, Al-Hammadi S, Ren Z, da Silva G. Thermal Decomposition Kinetics of the Indenyl Radical: A Theoretical Study. J Phys Chem A 2021; 125:2782-2790. [PMID: 33783215 DOI: 10.1021/acs.jpca.1c01000] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Quantum chemistry and statistical reaction rate theory calculations have been performed to investigate the products and kinetics of indenyl radical decomposition. Three competitive product sets are identified, including formation of a cyclopentadienyl radical (c-C5H5) and diacetylene (C4H2), which has not been included in prior theoretical kinetics investigations. Rate coefficients for indenyl decomposition are determined from master equation simulations at 1800-2400 K and 0.01-100 atm, and temperature- and pressure-dependent rate coefficient expressions are incorporated into a detailed chemical kinetic model for indene pyrolysis. Indenyl is found to predominantly decompose to o-benzyne (o-C6H4) + propargyl (C3H3), with lesser amounts of fulvenallenyl (C7H5) + C2H2 and c-C5H5 + C4H2.
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Affiliation(s)
- Srivathsan P Sundar
- Department of Chemical Engineering, The University of Melbourne, Melbourne, Victoria 3010, Australia
| | - Saddam Al-Hammadi
- Department of Chemical Engineering, The University of Melbourne, Melbourne, Victoria 3010, Australia
| | - Zhonghua Ren
- Department of Chemical Engineering, The University of Melbourne, Melbourne, Victoria 3010, Australia
| | - Gabriel da Silva
- Department of Chemical Engineering, The University of Melbourne, Melbourne, Victoria 3010, Australia
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