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Li T, Chen S, Li J, Zhu Q, Li Z. Accurate Kinetics of Cyclization Reactions of the Large-Size Hydroperoxy Methyl-Ester Radicals Investigated by the Isodesmic Reaction Correction Method. J Phys Chem A 2023; 127:10253-10267. [PMID: 38015153 DOI: 10.1021/acs.jpca.3c06089] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2023]
Abstract
The cyclization reactions of hydroperoxymethylester radicals are pivotal in low-temperature methyl-ester combustion but limited experimental and theoretical kinetic data pose challenges. Prior research has drawn upon analogous hydroperoxy alkyl radical cyclization reactions to approximate rate constants and might inaccurately represent ester group-specific behavior. This study systematically investigates these kinetics, accounting for ester group effects and computational complexities in large molecular systems. The reactions are categorized into 11 classes based on cyclic transition state size and -OOH/radical positions. Energy barriers and high-pressure-limit rate constants are calculated using the isodesmic reaction correction method, validated, and applied to 24 subclasses based on carbon sites connected to -OOH and radical moieties. Subclass high-pressure-limit rate rules are derived through averaging rate constants. Analysis reveals uncertainties within acceptable chemical accuracy limits, validating the reaction classification and rate rules. We conduct comparative analyses with values from analogous alkyl reactions in established mechanisms while comparing our results with the high-pressure-limit rate rules for analogous alkane reactions. These comparisons reveal notable disparities, emphasizing the ester group's influence and necessitating tailored ester-specific rate rules. These findings hold promise for improving automatic reaction mechanism generation, particularly for large methyl esters.
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Affiliation(s)
- Tao Li
- School of Chemical Engineering, Sichuan University, Chengdu 610065, P. R. China
- Engineering Research Center of Combustion and Cooling for Aerospace Power, Ministry of Education, Sichuan University, Chengdu, Sichuan 610065, P. R. China
| | - Siyu Chen
- School of Chemical Engineering, Sichuan University, Chengdu 610065, P. R. China
- Engineering Research Center of Combustion and Cooling for Aerospace Power, Ministry of Education, Sichuan University, Chengdu, Sichuan 610065, P. R. China
| | - Juanqin Li
- School of Chemical Engineering, Sichuan University, Chengdu 610065, P. R. China
- Engineering Research Center of Combustion and Cooling for Aerospace Power, Ministry of Education, Sichuan University, Chengdu, Sichuan 610065, P. R. China
| | - Quan Zhu
- School of Chemical Engineering, Sichuan University, Chengdu 610065, P. R. China
- Engineering Research Center of Combustion and Cooling for Aerospace Power, Ministry of Education, Sichuan University, Chengdu, Sichuan 610065, P. R. China
| | - Zerong Li
- Engineering Research Center of Combustion and Cooling for Aerospace Power, Ministry of Education, Sichuan University, Chengdu, Sichuan 610065, P. R. China
- College of Chemistry, Sichuan University, Chengdu 610064, P. R. China
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2
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Li T, Li J, Chen S, Zhu Q, Li Z. Investigating the kinetics of the intramolecular H-migration reaction class of methyl-ester peroxy radicals in low-temperature oxidation mechanisms of biodiesel. Phys Chem Chem Phys 2023; 25:32078-32092. [PMID: 37982313 DOI: 10.1039/d3cp03376g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2023]
Abstract
Biodiesel is a promising, sustainable, and carbon-neutral fuel. However, studying its combustion mechanisms comprehensively, both theoretically and experimentally, presents challenges due to the complexity and size of its molecules. One significant obstacle in determining low-temperature oxidation mechanisms for biodiesel is the lack of kinetic parameters for the reaction class of intramolecular H-migration reactions of alkyl-ester peroxy radicals, labeled as R(CO)OR'-OO˙ (where the 'dot' represents the radical). Current biodiesel combustion mechanisms often estimate these parameters from the analogous reaction class of intramolecular H-migration reactions of alkyl peroxy radicals in alkane combustion mechanisms. However, such estimations are imprecise and neglect the unique characteristics of the ester group. This research aims to explore the kinetics of the reaction class of H-migration reactions of methyl-ester peroxy radicals. The reaction class is divided into 20 subclasses based on the newly formed cycle size of the transition state, the positions of the peroxy radical and the transferred H atom, and the types of carbons from which the H atom is transferred. Energy barriers for each subclass are calculated by using the CBS-QB3//M06-2X/6-311++G(d,p) method. High-pressure-limit and pressure-dependent rate constants ranging from 0.01 to 100 atm are determined using the transition state theory and Rice-Ramsberger-Kassel-Marcus/master-equation method, respectively. It is noted that the pressure-dependent rate constants calculated for each individual isomerization channel could bring some uncertainties while neglecting the interconnected pathways. A comprehensive comparison is made between our values of selected reactions and high-level calculated values of the corresponding reactions reported in the literature. The small deviation observed between these values indicates the accuracy and reliability of the energy barriers and rate constants calculated in this study. Additionally, our calculated high-pressure-limit rate constants are compared with the corresponding values in combustion mechanisms of esters, which were estimated based on analogous reactions of alkyl peroxy radicals. These comparative analyses shed light on the significant impact of the ester group on the kinetics, particularly when the ester group is involved in the reaction center. Finally, the high-pressure-limit rate rule and pressure-dependent rate rule for each subclass are derived by averaging the rate constants of reactions in each subclass. The accurate and reasonable rate rules for methyl-ester peroxy radicals developed in this study play a crucial role in enhancing our understanding of the low-temperature oxidation mechanisms of biodiesel.
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Affiliation(s)
- Tao Li
- School of Chemical Engineering, Sichuan University, Chengdu 610065, P. R. China.
| | - Juanqin Li
- School of Chemical Engineering, Sichuan University, Chengdu 610065, P. R. China.
| | - Siyu Chen
- School of Chemical Engineering, Sichuan University, Chengdu 610065, P. R. China.
| | - Quan Zhu
- School of Chemical Engineering, Sichuan University, Chengdu 610065, P. R. China.
- Engineering Research Center of Combustion and Cooling for Aerospace Power, Ministry of Education, Sichuan University, Chengdu, Sichuan 610065, P. R. China
| | - Zerong Li
- College of Chemistry, Sichuan University, Chengdu 610064, P. R. China
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Yao X, Zhang J, Zhu Y. A Theoretical Kinetic Study on Concerted Elimination Reaction Class of Peroxyl-hydroperoxyl-alkyl Radicals (•OOQOOH) in Normal-alkyl Cyclohexanes. Molecules 2023; 28:6612. [PMID: 37764388 PMCID: PMC10536632 DOI: 10.3390/molecules28186612] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2023] [Revised: 09/01/2023] [Accepted: 09/12/2023] [Indexed: 09/29/2023] Open
Abstract
The concerted elimination reaction class of peroxyl-hydroperoxyl alkyl radicals (•OOQOOH) plays a crucial role in the low-temperature combustion of normal-alkyl cyclohexanes. The generation of the relatively unreactive HO2 radicals in this reaction is one of the factors leading to the negative temperature coefficient (NTC) behavior, which hinders the low-temperature oxidation of normal-alkyl cyclohexanes. In this study, 44 reactions are selected and divided into 4 different subclasses according to the nature of the carbon atom where the H atom is eliminated and the reaction center position. Utilizing the CBS-QB3 method, we compute the energy barriers for the concerted elimination reactions of peroxyl-hydroperoxyl alkyl radicals. Following this, we assess both the high-pressure limit and pressure-dependent rate constants for all reactions by applying TST and RRKM/ME theory. These calculations allow for the development of rate rules, which come to fruition through an averaging process involving the rate constants of representative reactions within each subclass. Our work provides accurate rate constants and rate rules for this reaction class, which can aid in constructing more accurate combustion mechanisms for normal-alkyl cyclohexanes.
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Affiliation(s)
- Xiaoxia Yao
- National Key Lab of Aerospace Power System and Plasma Technology, Air Force Engineering University, Xi’an 710038, China;
| | - Jilong Zhang
- Institute of Theoretical Chemistry, College of Chemistry, Jilin University, Changchun 130023, China
| | - Yifei Zhu
- School of Electrical Engineering, Xi’an Jiaotong University, Xi’an 710049, China
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4
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Sun X, Pei Z, Li Z. High-Pressure-Limit Rate Coefficients for HO 2 Elimination Reactions of Hydroperoxyalkenylperoxy Radicals based on the Reaction Class Transition State Theory. ACS OMEGA 2022; 7:20020-20031. [PMID: 35721926 PMCID: PMC9202253 DOI: 10.1021/acsomega.2c01811] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/24/2022] [Accepted: 05/19/2022] [Indexed: 06/15/2023]
Abstract
Thermokinetic parameters and transport parameters are of great importance to the combustion model and the reaction rate rules are of great importance to construct the combustion reaction mechanism for hydrocarbon fuels. The HO2 elimination reaction class for hydroperoxyalkenylperoxy radicals is one of the key reaction classes for olefin, for which the rate coefficients are lacking. Therefore, the rate coefficients and rate rules of the HO2 elimination reaction class for hydroperoxyalkenylperoxy radicals are studied in this work. The reaction class transition state theory (RC-TST) is used to calculate the rate coefficients. In addition, the HO2 elimination reaction class of hydroperoxyalkenylperoxy radicals is divided into four subclasses depending upon the type of H-Cβ bond that is broken in the reactant molecules, and the rate rules are calculated by taking the average of rate coefficients from a representative set of reactions in a subclass. The calculated kinetics data would be valuable for the construction of the combustion reaction mechanism for olefin.
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Affiliation(s)
- XiaoHui Sun
- School
of Energy Industry, Shanxi College of Technology, Shuozhou 036000, P. R. China
- College
of Chemistry, Sichuan University, Chengdu 610064, P. R. China
| | - ZhenYu Pei
- School
of Energy Industry, Shanxi College of Technology, Shuozhou 036000, P. R. China
| | - ZeRong Li
- College
of Chemistry, Sichuan University, Chengdu 610064, P. R. China
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Goldman MJ, Green WH, Kroll JH. Chemistry of Simple Organic Peroxy Radicals under Atmospheric through Combustion Conditions: Role of Temperature, Pressure, and NO x Level. J Phys Chem A 2021; 125:10303-10314. [PMID: 34843244 DOI: 10.1021/acs.jpca.1c07203] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Organic peroxy radicals (RO2) are key intermediates in the oxidation of organic compounds in both combustion systems and the atmosphere. While many studies have focused on reactions of RO2 in specific applications, spanning a relatively limited range of reaction conditions, the generalized behavior of RO2 radicals across the full range of reaction conditions (temperatures, pressures, and NO levels) has, to our knowledge, never been explored. In this work, two simple model systems, n-propyl peroxy radical and γ-isobutanol peroxy radical, are used to evaluate RO2 fate using pressure-dependent kinetics. The fate of these radicals was modeled based on literature data over 250-1250 K, 0.01-100 bar, and 1 ppt to 100 ppm of NO, which spans the typical range of atmospheric and combustion conditions. Covering this entire range provides a broad overview of the reactivity of these species under both atmospheric and combustion conditions, as well as under conditions intermediate to the two. A particular focus is on the importance of reactions that were traditionally considered to occur in only one of the two sets of conditions: RO2 unimolecular isomerization reactions (long known to occur in combustion systems but only recently appreciated in atmospheric systems) and RO2 bimolecular reactions of RO2 with NO (thought to occur mainly in atmospheric systems and rarely considered in combustion chemistry).
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Affiliation(s)
- Mark Jacob Goldman
- Department of Chemical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - William H Green
- Department of Chemical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
| | - Jesse H Kroll
- Department of Chemical Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States.,Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, United States
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6
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High-pressure limit rate rules for intramolecular H-migration reactions of α,β-hydroxyalkylperoxy radicals. Theor Chem Acc 2021. [DOI: 10.1007/s00214-021-02849-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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7
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A theoretical study of β-hydroxybutenyl with O2 on the HOC4H6OO· potential energy surface. Theor Chem Acc 2021. [DOI: 10.1007/s00214-021-02842-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Zhao M, Ning H, Shang Y, Shi J. Accurate reaction barriers and rate constants of H-abstraction from primary, secondary, and tertiary amines by H atom determined with the isodesmic reaction method. Chem Phys Lett 2021. [DOI: 10.1016/j.cplett.2021.138708] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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9
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Khiri D, Taamalli S, Dao DQ, Nguyen TB, Gasnot L, Louis F, Černuśák I, El Bakali A. Thermochemical and kinetic studies of hydrogen abstraction reaction from C16H10 isomers by H atoms. COMPUT THEOR CHEM 2021. [DOI: 10.1016/j.comptc.2021.113257] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
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Møller KH, Berndt T, Kjaergaard HG. Atmospheric Autoxidation of Amines. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2020; 54:11087-11099. [PMID: 32786344 DOI: 10.1021/acs.est.0c03937] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Autoxidation has been acknowledged as a major oxidation pathway in a broad range of atmospherically important compounds including isoprene, monoterpenes, and very recently, dimethyl sulfide. Here, we present a high-level theoretical multiconformer transition-state theory study of the atmospheric autoxidation in amines exemplified by the atmospherically important trimethylamine (TMA) and dimethylamine and generalized by the study of the larger diethylamine. Overall, we find that the initial hydrogen shift reactions have rate coefficients greater than 0.1 s-1 and autoxidation is thus an important atmospheric pathway for amines. This autoxidation efficiently leads to the formation of hydroperoxy amides, a new type of atmospheric nitrogen-containing compounds, and for TMA, we experimentally confirm this. The conversion of amines to hydroperoxy amides may have important implications for nucleation and growth of atmospheric secondary organic aerosols and atmospheric OH recycling.
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Affiliation(s)
- Kristian H Møller
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen Ø, Denmark
| | - Torsten Berndt
- Atmospheric Chemistry Department (ACD), Leibniz Institute for Tropospheric Research (TROPOS), Permoserstraße 15, 04318 Leipzig, Germany
| | - Henrik G Kjaergaard
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen Ø, Denmark
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11
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Cao XM, Li ZR, Wang JB, Li XY. Rate rules for hydrogen abstraction reaction kinetics of alkenes from allylic sites by HO2 radical. COMPUT THEOR CHEM 2020. [DOI: 10.1016/j.comptc.2020.112795] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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12
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Rate rules for hydrogen abstraction reaction kinetics of polycyclic aromatic hydrocarbons and vinyl radical. Theor Chem Acc 2020. [DOI: 10.1007/s00214-020-02612-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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13
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Møller KH, Otkjær RV, Chen J, Kjaergaard HG. Double Bonds Are Key to Fast Unimolecular Reactivity in First-Generation Monoterpene Hydroxy Peroxy Radicals. J Phys Chem A 2020; 124:2885-2896. [DOI: 10.1021/acs.jpca.0c01079] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Kristian H. Møller
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, Copenhagen Ø DK-2100, Denmark
| | - Rasmus V. Otkjær
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, Copenhagen Ø DK-2100, Denmark
| | - Jing Chen
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, Copenhagen Ø DK-2100, Denmark
| | - Henrik G. Kjaergaard
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, Copenhagen Ø DK-2100, Denmark
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Møller KH, Bates KH, Kjaergaard HG. The Importance of Peroxy Radical Hydrogen-Shift Reactions in Atmospheric Isoprene Oxidation. J Phys Chem A 2019; 123:920-932. [DOI: 10.1021/acs.jpca.8b10432] [Citation(s) in RCA: 47] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Kristian H. Møller
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen Ø, Denmark
| | - Kelvin H. Bates
- Center for the Environment, Harvard University, 29 Oxford Street, Cambridge, Massachusetts 02138, United States
| | - Henrik G. Kjaergaard
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen Ø, Denmark
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15
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Praske E, Otkjær RV, Crounse JD, Hethcox JC, Stoltz BM, Kjaergaard HG, Wennberg PO. Intramolecular Hydrogen Shift Chemistry of Hydroperoxy-Substituted Peroxy Radicals. J Phys Chem A 2018; 123:590-600. [DOI: 10.1021/acs.jpca.8b09745] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Eric Praske
- Division of Chemistry and Chemical Engineering, California Institute of Technology, 1200 East California Boulevard, Pasadena, California 91125, United States
| | - Rasmus V. Otkjær
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen Ø, Denmark
| | - John D. Crounse
- Division of Geological and Planetary Sciences, California Institute of Technology, 1200 East California Boulevard, Pasadena, California 91125, United States
| | - J. Caleb Hethcox
- Division of Chemistry and Chemical Engineering, California Institute of Technology, 1200 East California Boulevard, Pasadena, California 91125, United States
| | - Brian M. Stoltz
- Division of Chemistry and Chemical Engineering, California Institute of Technology, 1200 East California Boulevard, Pasadena, California 91125, United States
| | - Henrik G. Kjaergaard
- Department of Chemistry, University of Copenhagen, Universitetsparken 5, DK-2100 Copenhagen Ø, Denmark
| | - Paul O. Wennberg
- Division of Geological and Planetary Sciences, California Institute of Technology, 1200 East California Boulevard, Pasadena, California 91125, United States
- Division of Engineering and Applied Science, California Institute of Technology, 1200 East California Boulevard, Pasadena, California 91125, United States
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Mohamed SY, Davis AC, Al Rashidi MJ, Sarathy SM. Computational Kinetics of Hydroperoxybutylperoxy Isomerizations and Decompositions: A Study of the Effect of Hydrogen Bonding. J Phys Chem A 2018; 122:6277-6291. [DOI: 10.1021/acs.jpca.8b04415] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Samah Y. Mohamed
- King Abdullah University of Science and Technology, Clean Combustion Research Center, Thuwal, 23955-6900, Saudi Arabia
| | - Alexander C. Davis
- Franklin and Marshall College, Lancaster, Pennsylvania 17604-3003, United States
| | | | - S. Mani Sarathy
- King Abdullah University of Science and Technology, Clean Combustion Research Center, Thuwal, 23955-6900, Saudi Arabia
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17
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Mohamed SY, Davis AC, Al Rashidi MJ, Sarathy SM. High-Pressure Limit Rate Rules for α-H Isomerization of Hydroperoxyalkylperoxy Radicals. J Phys Chem A 2018. [DOI: 10.1021/acs.jpca.7b11955] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Samah Y. Mohamed
- Clean Combustion Research Center, King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
| | - Alexander C. Davis
- Franklin and Marshall College, Lancaster, Pennsylvania 17604-3003, United States
| | | | - S. Mani Sarathy
- Clean Combustion Research Center, King Abdullah University of Science and Technology, Thuwal, 23955-6900, Saudi Arabia
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