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Mn2 Dimers Encapsulated in Silicon Cages: A Complex Challenge to MC-SCF Theory. Molecules 2022; 27:molecules27217544. [DOI: 10.3390/molecules27217544] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2022] [Revised: 10/25/2022] [Accepted: 10/29/2022] [Indexed: 11/06/2022] Open
Abstract
MC-SCF wavefunctions for three endohedral Mn/Si clusters, Mn2Si10, Mn2Si12, and [Mn2Si13]+, show evidence for strong static correlation, both in the Mn-Si bonds (’in–out correlation’) and between the two Mn centers (’up–down correlation’). We use both Restricted and Generalized Active Spaces (RAS and GAS) to place constraints on the configurations included in the trial wavefunction, showing that, particularly in the high-symmetry cases, the GAS approach captures more of the static correlation. The important correlating pairs are similar across the series, indicating that the electronic structure of the endohedral Mn2 unit is, to a first approximation, independent of the size of the silicon cage in which it is embedded.
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2
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Nguyen HT, Cuong NT, Lan NT, Tung NT, Nguyen MT, Tam NM. First-row transition metal doped germanium clusters Ge 16M: some remarkable superhalogens. RSC Adv 2022; 12:13487-13499. [PMID: 35527729 PMCID: PMC9068264 DOI: 10.1039/d1ra08527a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2021] [Accepted: 04/26/2022] [Indexed: 11/21/2022] Open
Abstract
A theoretical study of geometric and electronic structures, stability and magnetic properties of both neutral and anionic Ge16M0/- clusters with M being a first-row 3d transition metal atom, is performed using quantum chemical approaches. Both the isoelectronic Ge16Sc- anion and neutral Ge16Ti that have a perfect Frank-Kasper tetrahedral T d shape and an electron shell filled with 68 valence electrons, emerge as magic clusters with an enhanced thermodynamic stability. The latter can be rationalized by the simple Jellium model. Geometric distortions from the Frank-Kasper tetrahedron of Ge16M having more or less than 68 valence electrons can be understood by a Jahn-Teller effect. Remarkably, DFT calculations reveal that both neutral Ge16Sc and Ge16Cu can be considered as superhalogens as their electron affinities (≥3.6 eV) exceed the value of the halogen atoms and even that of icosahedral Al13. A detailed view of the magnetic behavior of Ge16M0/- clusters shows that the magnetic moments of the atomic metals remain large even when they are quenched upon doping. When M goes from Sc to Zn, the total spin magnetic moment of Ge16M0/- increases steadily and reaches the maximum value of 3 μ B with M = Mn before decreasing towards the end of the first-row 3d block metals. Furthermore, the IR spectra of some tetrahedral Ge16M are also predicted.
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Affiliation(s)
- Huu Tho Nguyen
- Faculty of Natural Sciences Education, Sai Gon University 273 An Duong Vuong Street Ho Chi Minh City Vietnam
| | - Ngo Tuan Cuong
- Center for Computational Science, Faculty of Chemistry, Hanoi National University of Education Hanoi Vietnam
| | - Ngo Thi Lan
- Institute of Materials Science and Graduate University of Science and Technology, Vietnam Academy of Science and Technology 18 Hoang Quoc Viet Hanoi Vietnam
- Institute of Science and Technology, TNU-University of Sciences Tan Thinh Ward Thai Nguyen City Vietnam
| | - Nguyen Thanh Tung
- Institute of Materials Science and Graduate University of Science and Technology, Vietnam Academy of Science and Technology 18 Hoang Quoc Viet Hanoi Vietnam
| | - Minh Tho Nguyen
- Institute for Computational Science and Technology (ICST) Quang Trung Software City Ho Chi Minh City Vietnam
| | - Nguyen Minh Tam
- Laboratory of Theoretical and Computational Biophysics, Advanced Institute of Materials Science, Ton Duc Thang University Ho Chi Minh City Vietnam
- Faculty of Pharmacy, Ton Duc Thang University Ho Chi Minh City Vietnam
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3
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Khanna V, Singh R, Claes P, Nguyen MT, Fielicke A, Janssens E, Lievens P, McGrady JE. Evolution of Vibrational Spectra in the Manganese-Silicon Clusters Mn 2Si n, n = 10, 12, and 13, and Cationic [Mn 2Si 13] . J Phys Chem A 2022; 126:1617-1626. [PMID: 35238570 PMCID: PMC9084549 DOI: 10.1021/acs.jpca.1c10027] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
![]()
A comparison
of DFT-computed and measured infrared spectra reveals
the ground state structures of a series of gas-phase silicon clusters
containing a common Mn2 unit. Mn2Si12 and [Mn2Si13]+ are both axially
symmetric, allowing for a clean separation of the vibrational modes
into parallel (a1) and perpendicular (e1) components.
Information about the Mn–Mn and Mn–Si bonding can be
extracted by tracing the evolution of these modes as the cluster increases
in size. In [Mn2Si13]+, where the
antiprismatic core is capped on both hexagonal faces, a relatively
simple spectrum emerges that reflects a pseudo-D6d geometry. In cases where the cluster is
more polar, either because there is no capping atom in the lower face
(Mn2Si12) or the capping atom is present but
displaced off the principal axis (Mn2Si13),
the spectra include additional features derived from vibrational modes
that are forbidden in the parent antiprism.
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Affiliation(s)
- Vaibhav Khanna
- Department of Chemistry, University of Oxford, South Parks Road, Oxford OX1 3QR, U.K
| | - Roshan Singh
- Department of Chemistry, University of Oxford, South Parks Road, Oxford OX1 3QR, U.K
| | - Pieterjan Claes
- Quantum Solid-State Physics, Department of Physics and Astronomy, KU Leuven, Celestijnenlaan 200 D, B-3001 Leuven, Belgium
| | - Minh Tho Nguyen
- Institute for Computational Science and Technology (ICST), Quang Trung Software City, Ho Chi Minh City 53151, Vietnam
| | - André Fielicke
- Fritz-Haber-Institut der Max-Planck-Gesellschaft, Faradayweg 4-6, 14195 Berlin, Germany.,Institut für Optik und Atomare Physik, Technische Universität Berlin, Hardenbergstrasse 36, 10623, Berlin, Germany
| | - Ewald Janssens
- Quantum Solid-State Physics, Department of Physics and Astronomy, KU Leuven, Celestijnenlaan 200 D, B-3001 Leuven, Belgium
| | - Peter Lievens
- Quantum Solid-State Physics, Department of Physics and Astronomy, KU Leuven, Celestijnenlaan 200 D, B-3001 Leuven, Belgium
| | - John E McGrady
- Department of Chemistry, University of Oxford, South Parks Road, Oxford OX1 3QR, U.K
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4
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Morgan HWT, Csizi KS, Huang YS, Sun ZM, McGrady JE. Open Shells in Endohedral Clusters: Structure and Bonding in the [Fe 2@Ge 16] 4- Anion and Comparison to Isostructural [Co 2@Ge 16] 4. J Phys Chem A 2021; 125:4578-4588. [PMID: 34014678 DOI: 10.1021/acs.jpca.1c02837] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The anionic cluster [Fe2@Ge16]4- has been characterized and shown to be isostructural to the known D2h-symmetric α isomer of the cobalt analogue [Co2@Ge16]4-. Together with the known pair of compounds [Co@Ge10]3- and [Fe@Ge10]3-, the title compound completes a set of four closely related germanium clusters that allow us to explore how the metal-metal and metal-cage interactions evolve as a function of size and of the identity of the metal. The results of spin-unrestricted density functional theory (DFT) and multiconfigurational self-consistent field (MC-SCF) calculations present a consistent picture of the electronic structure where transfer of electron density from the metal to the cage is significant, particularly in the Fe clusters where the exchange stabilization of unpaired spin density is an important driving force.
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Affiliation(s)
- Harry W T Morgan
- Department of Chemistry, University of Oxford, South Parks Road, Oxford OX1 3QR, U.K
| | - Katja-Sophia Csizi
- Department of Chemistry, University of Oxford, South Parks Road, Oxford OX1 3QR, U.K
| | - Ya-Shan Huang
- Tianjin Key Lab of Rare Earth Materials and Applications, School of Materials Science and Engineering, Nankai University, Tianjin 300350, China
| | - Zhong-Ming Sun
- Tianjin Key Lab of Rare Earth Materials and Applications, School of Materials Science and Engineering, Nankai University, Tianjin 300350, China
| | - John E McGrady
- Department of Chemistry, University of Oxford, South Parks Road, Oxford OX1 3QR, U.K
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5
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Tran VT, Tran QT. Interpretation of photoelectron spectra of CoGe n- (n = 4, 5) clusters by multiconfigurational RASPT2 calculations. J Mol Model 2021; 27:131. [PMID: 33893559 DOI: 10.1007/s00894-021-04753-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2020] [Accepted: 04/15/2021] [Indexed: 11/29/2022]
Abstract
The low-lying electronic states CoGen-/0 (n = 4, 5) have been investigated with density functional theory and the state-of-the-art RASSCF/RASPT2 method to give assignments for the anion photoelectron spectra. The BP86 functional was employed to optimize the geometrical structures of the electronic states, while the RASSCF/RASPT2 was applied to calculate the single-point energies. With the RASSCF/RASPT2 approach, the active spaces are extended to a size of 21 orbitals for CoGe4-/0 and 24 orbitals for CoGe5-/0. The ground states of CoGe4-/0 are determined to be 3A″ and 2A″ of a trigonal bipyramidal structure in which the Co atom is situated at the equatorial corner of the bipyramid. The vertical detachment energies of the transitions from the anionic ground state to the neutral 2A″, 14A″, 2A', 24A″, 34A″, 14A', 24A', and 64A″ states are evaluated to be 2.29, 2.39, 2.60, 2.83, 3.17, 3.24, 3.47, and 4.00 eV. For the CoGe5-/0 clusters, the ground states are computed to be 1A1 and 12A2 of an octahedral structure. The vertical detachment energies of the removal of one electron from the anionic ground state to result in the 12A2, 12A1, 22A1, 12B1, 12B2, 42B1, 42B2, and 62A2 states are estimated to be 2.16, 2.79, 2.84, 3.06, 3.06, 3.59, 3.59, and 4.22 eV. All features in the photoelectron spectra of CoGe4- and CoGe5- are interpreted based on the computed electron detachment energies of the anionic ground states.
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Affiliation(s)
- Van Tan Tran
- Theoretical and Physical Chemistry Division, Dong Thap University, 783-Pham Huu Lau, Cao Lanh City, Dong Thap, Vietnam.
| | - Quoc Tri Tran
- Theoretical and Physical Chemistry Division, Dong Thap University, 783-Pham Huu Lau, Cao Lanh City, Dong Thap, Vietnam
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6
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Theoretical Study on Structural Stability, Growth Behavior and Photoelectron Spectroscopy of Copper-Doped Germanium Clusters CuGen−/0 (n = 4–13). J CLUST SCI 2021. [DOI: 10.1007/s10876-021-01985-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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7
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Benaida M, Aiadi KE, Mahtout S, Bentouila O, Djaadi S, Harb M. DFT-based investigation of different properties for transition metal-doped germanium TMGe n (TM = Ru, Rh; n = 1-20) clusters. J Mol Model 2020; 26:343. [PMID: 33201397 DOI: 10.1007/s00894-020-04598-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2020] [Accepted: 11/03/2020] [Indexed: 10/23/2022]
Abstract
The geometries and energetic, electronic, and magnetic features of transition metal-doped germanium (TMGen with TM = Ru, Rh; n = 1-20) clusters are systematically studied by means of first principle computations on the basis of the density functional theory (DFT) approach. The doping TM atom largely participates to strengthen the Gen cluster stability by increasing the binding energies. A good stability is obtained for RuGe12, RhGe12, and RhGe14 clusters. The various explored isomers of TMGen clusters possess a total spin magnetic moment going from 0 to 2μB, except for RhGe2 with 3μB. These results open nice perspectives of these good candidate clusters for applications in nanoelectronics and nanotechnologies.
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Affiliation(s)
- Meriem Benaida
- Laboratoire de Développement des Energies Nouvelles et Renouvelables en Zones Aride, Université de Ouargla, 30000, Ouargla, Algeria.
| | - Kamal Eddine Aiadi
- Laboratoire de Développement des Energies Nouvelles et Renouvelables en Zones Aride, Université de Ouargla, 30000, Ouargla, Algeria
| | - Sofiane Mahtout
- Laboratoire de Physique Théorique, Faculté des Sciences Exactes, Université de Bejaia, 06000, Bejaia, Algeria
| | - Omar Bentouila
- Laboratoire de Développement des Energies Nouvelles et Renouvelables en Zones Aride, Université de Ouargla, 30000, Ouargla, Algeria
| | - Soumaia Djaadi
- Laboratoire de Développement des Energies Nouvelles et Renouvelables en Zones Aride, Université de Ouargla, 30000, Ouargla, Algeria
| | - Moussab Harb
- KAUST Catalysis Center (KCC), Physical Sciences and Engineering Division (PSE), King Abdullah University of Science and Technology (KAUST), Thuwal, 23955-6900, Saudi Arabia.
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8
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Tran VT, Tran QT. Electronic structures of
NbGe
n
−/0/+
(
n
= 1–3) clusters from multiconfigurational
CASPT2
and density matrix renormalization group
‐CASPT2
calculations. J Comput Chem 2020; 41:2641-2652. [DOI: 10.1002/jcc.26420] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2020] [Revised: 07/01/2020] [Accepted: 08/28/2020] [Indexed: 11/09/2022]
Affiliation(s)
- Van Tan Tran
- Theoretical and Physical Chemistry Division Dong Thap University Cao Lanh Dong Thap Vietnam
| | - Quoc Tri Tran
- Theoretical and Physical Chemistry Division Dong Thap University Cao Lanh Dong Thap Vietnam
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9
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The effect of palladium and platinum doping on the structure, stability and optical properties of germanium clusters: DFT study of PdGen and PtGen (n = 1–20) clusters. COMPUT THEOR CHEM 2020. [DOI: 10.1016/j.comptc.2020.112830] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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10
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Tran VT, Tran QT. Low-Lying Electronic States of FeGen–/0 (n = 1–3) Clusters Calculated with Multireference Second-Order Perturbation Theory. J Phys Chem A 2020; 124:4095-4105. [DOI: 10.1021/acs.jpca.0c02521] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Van Tan Tran
- Theoretical and Physical Chemistry Division, Dong Thap University, 783-Pham Huu Lau, Ward 6, Cao Lanh City, Dong Thap 81000, Vietnam
| | - Quoc Tri Tran
- Theoretical and Physical Chemistry Division, Dong Thap University, 783-Pham Huu Lau, Ward 6, Cao Lanh City, Dong Thap 81000, Vietnam
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11
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Structure, stability, and electronic properties of niobium-germanium and tantalum-germanium clusters. J Mol Model 2019; 25:113. [PMID: 30953156 DOI: 10.1007/s00894-019-3988-5] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2018] [Accepted: 03/13/2019] [Indexed: 10/27/2022]
Abstract
The structural, electronic and magnetic properties of niobium- and tantalum-doped germanium clusters MGen (M = Nb, Ta and n = 1-19) were investigated by first principles calculations within the density functional theory (DFT) approach. Growth pattern behaviors, stabilities, and electronic properties are presented and discussed. Endohedral cage-like structures in which the metal atom is encapsulated are favored for n ≥ 10. The doping metal atom contributes largely to strengthening the stability of the germanium cage-like structures, with binding energy ordered as follows BE(Gen + 1) < BE (VGen) < BE(NbGen) < BE(TaGen). Our results highlight the relative high stability of NbGe15, TaGe15 and VGe14. Graphical abstract Structure, stability, and electronic properties of niobium-germanium and tantalum-germanium clusters.
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12
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Nguyen MT, Tran QT, Tran VT. The ground and excited low-lying states of VSi20/−/+ clusters from CASSCF/CASPT2 calculations. Chem Phys Lett 2019. [DOI: 10.1016/j.cplett.2019.02.043] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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13
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Tran VT, Tran QT. Spin State Energetics of VGe n -/0 (n = 5-7) Clusters and New Assignments of the Anion Photoelectron Spectra. J Comput Chem 2018; 39:2103-2109. [PMID: 30207608 DOI: 10.1002/jcc.25527] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2018] [Accepted: 06/24/2018] [Indexed: 01/20/2023]
Abstract
The geometrical structures, electron leading configurations, and relative energies of the low-lying states of VGe n -/0 (n = 5-7) clusters have been investigated with density functional theory and CASSCF/CASPT2 method. The pure GGA BP86 functional gave almost the same relative energy order for the low-lying states as the CASPT2 method. At the BP86 and CASPT2 levels, the ground states of VGe n -/0 (n = 5-7) clusters were proposed to be the 1 A1 and 2 A1 of A-VGe5 -/0 , 3 A″ and 2 A″, 2 A' (2 E2 ) of A-VGe6 -/0 , and 1 A' and 2 A' of A-VGe7 -/0 isomers. The adiabatic and vertical detachment energies (ADEs and VDEs) of the detachments of one electron from several orbitals of the anionic ground states were reported at the CASPT2 level. The calculated ADEs and VDEs corresponded well with the experimental values as observed in the 266 nm anion photoelectron spectra. © 2018 Wiley Periodicals, Inc.
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Affiliation(s)
- Van Tan Tran
- Theoretical and Physical Chemistry Division, Dong Thap University, 783-Pham Huu Lau, Ward 6, Cao Lanh City, Dong Thap, Vietnam
| | - Quoc Tri Tran
- Theoretical and Physical Chemistry Division, Dong Thap University, 783-Pham Huu Lau, Ward 6, Cao Lanh City, Dong Thap, Vietnam
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14
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Thao NM, Hanh NTH, Tuan TT, Tri TQ, Van Tan T. An investigation on the electronic structures of diatomic VSi0/−/+
clusters by CASSCF/CASPT2 method. VIETNAM JOURNAL OF CHEMISTRY 2018. [DOI: 10.1002/vjch.201800034] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Nguyen Minh Thao
- Theoretical and Physical Chemistry Division; Dong Thap University; Viet Nam
- Faculty of Chemistry; University of Science - VNUHCMC; Viet Nam
| | | | - Tran Thanh Tuan
- Theoretical and Physical Chemistry Division; Dong Thap University; Viet Nam
| | - Tran Quoc Tri
- Theoretical and Physical Chemistry Division; Dong Thap University; Viet Nam
| | - Tran Van Tan
- Theoretical and Physical Chemistry Division; Dong Thap University; Viet Nam
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15
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Tran VT, Tran QT. The Electronic Structures of CoGe n-/0 ( n = 1-3) Clusters from Multiconfigurational CASSCF/CASPT2 and RASSCF/RASPT2 Calculations. J Phys Chem A 2018; 122:6407-6415. [PMID: 29999327 DOI: 10.1021/acs.jpca.8b04846] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Density functional theory and multiconfigurational CASPT2 and RASPT2 methods are employed to investigate the low-lying states of CoGe n-/0 ( n = 1-3) clusters. With the RASPT2 approach, the active space is extended to 14 orbitals for CoGe-/0, 17 orbitals for CoGe2-/0, and 20 orbitals for CoGe3-/0. These active spaces include the 3d, 4s, and 4d of Co and 4p of Ge. The 4d of Co is incorporated into these active spaces in order to account for the important double-shell effect of Co. The structural parameters, vibrational frequencies, and relative energies of the low-lying states of CoGe n-/0 ( n = 1-3) are reported. The ground states of CoGe n- ( n = 1-3) are computed to be 3Φ of linear CoGe-, 3B1 of cyclic CoGe2-, and 3B1 of cyclic CoGe3- isomer. The ground states of the neutral clusters are calculated to be 2Δ of linear CoGe, 4B1 of cyclic CoGe2, and 4A″ of tetrahedral CoGe3 isomer. The calculated adiabatic and vertical detachment energies of the anionic ground states are in agreement with the experimental values as observed in the 266 nm anion photoelectron spectra.
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Affiliation(s)
- Van Tan Tran
- Theoretical and Physical Chemistry Division , Dong Thap University , 783-Pham Huu Lau, Ward 6 , Cao Lanh City , Dong Thap , Vietnam
| | - Quoc Tri Tran
- Theoretical and Physical Chemistry Division , Dong Thap University , 783-Pham Huu Lau, Ward 6 , Cao Lanh City , Dong Thap , Vietnam
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