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Eryilmaz S, Bagdatli E. Structural characterization and keto-enol tautomerization of 4-substituted pyrazolone derivatives with DFT approach. J Mol Graph Model 2024; 131:108814. [PMID: 38968767 DOI: 10.1016/j.jmgm.2024.108814] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2023] [Revised: 04/19/2024] [Accepted: 06/17/2024] [Indexed: 07/07/2024]
Abstract
The synthesis of two pyrazolone derivative compounds, PYR-I(4-Acetyl-1-(4-chlorophenyl)-3-isopropyl-1H-pyrazol-5(4H)-one) and PYR-II1-(4-Chlorophenyl))-3-isopropyl-5-oxo-4,5-5-dihydro-1H-pyrazole-4-carbaldehyde, their characterization by FT-IR, NMR, UV-Vis and GC-MS techniques, and the evaluation of the keto-enol tautomerization process of the structures along with the DFT approach and spectral data were reported in this paper. Spectral findings indicated that PYR-I was stable at the keto state. The IR spectrum recorded in solid form showed that the PYR-II structure was stable in the enol state, while the NMR spectrum in the solution medium showed that it was stable in the keto state. DFT-based analyses were realized with the B3LYP hybrid functional and the 6-311++G(d,p) basis set. The modelled keto, transition and enol state molecular geometries of structures were optimized in the gas phase and different solvent media and the total energy and dipole moment values were investigated at the specified theoretical level. The possible keto-enol tautomerism mechanism of the structures was evaluated through some thermodynamic parameters such as the difference in free Gibbs energy (ΔG), enthalpy (ΔH), entropy (ΔS), and predictive tautomeric equilibrium constants (Keq), acidity constants (pKa) and percentages of tautomers at 298.15 K and 1 atm pressure. The results of these analyses based on the DFT approach indicated that the keto-enol tautomer equilibrium heavily favours the keto form for PYR-I and the enol form for PYR-II in all cases. Moreover, natural bond orbital (NBO) analysis was performed for the tautomers, and the chemical reactivity profiles of the most stable tautomers were examined with the values of frontier molecular orbital energy and some reactivity descriptors.
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Affiliation(s)
- Serpil Eryilmaz
- Department of Physics, Faculty of Arts and Sciences, Amasya University, 05100, Amasya, Turkey.
| | - Emine Bagdatli
- Department of Chemistry, Faculty of Arts and Sciences, Ordu University, 52200, Ordu, Turkey
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Mohamed SY, Monge-Palacios M, Giri BR, Khaled F, Liu D, Farooq A, Sarathy SM. The Effect of Hydrogen Bonding on the Reactivity of OH Radicals with Prenol and Isoprenol: A Shock Tube and Multi-Structural Torsional Variational Transition State Theory Study. Phys Chem Chem Phys 2022; 24:12601-12620. [DOI: 10.1039/d2cp00737a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The presence of two functional groups (OH and double bond) in C5 methyl-substituted enols (i.e., isopentenols), such as 3-methyl-2-buten-1-ol (prenol) and 3-methyl-3-buten-1-ol (isoprenol), makes them excellent biofuel candidates as fuel...
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3
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Chavarrio Cañas JE, Monge-Palacios M, Grajales-González E, Sarathy SM. Early Chemistry of Nicotine Degradation in Heat-Not-Burn Smoking Devices and Conventional Cigarettes: Implications for Users and Second- and Third-Hand Smokers. J Phys Chem A 2021; 125:3177-3188. [PMID: 33834773 PMCID: PMC8154610 DOI: 10.1021/acs.jpca.1c01650] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Nicotine exposure results in health risks not only for smokers but also for second- and third-hand smokers. Unraveling nicotine's degradation mechanism and the harmful chemicals that are produced under different conditions is vital to assess exposure risks. We performed a theoretical study to describe the early chemistry of nicotine degradation by investigating two important reactions that nicotine can undergo: hydrogen abstraction by hydroxyl radicals and unimolecular dissociation. The former contributes to the control of the degradation mechanism below 800 K due to a non-Arrhenius kinetics, which implies an enhancement of reactivity as temperature decreases. The latter becomes important at higher temperatures due to its larger activation energy. This change in the degradation mechanism is expected to affect the composition of vapors inhaled by smokers and room occupants. Conventional cigarettes, which operate at temperatures higher than 1000 K, are more prone to yield harmful pyridinyl radicals via nicotine dissociation, while nicotine in electronic cigarettes and vaporizers, with operating temperatures below 600 K, will be more likely degraded by hydroxyl radicals, resulting in a vapor with a different composition. Although low-temperature nicotine delivery devices have been claimed to be less harmful due to their nonburning operating conditions, the non-Arrhenius kinetics that we observed for the degradation mechanism below 873 K suggests that nicotine degradation may be more rapidly initiated as temperature is reduced, indicating that these devices may be more harmful than it is commonly assumed.
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Affiliation(s)
- Javier E Chavarrio Cañas
- Clean Combustion Research Center (CCRC), Physical Science and Engineering (PSE) Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia
| | - M Monge-Palacios
- Clean Combustion Research Center (CCRC), Physical Science and Engineering (PSE) Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia
| | - E Grajales-González
- Clean Combustion Research Center (CCRC), Physical Science and Engineering (PSE) Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia
| | - S Mani Sarathy
- Clean Combustion Research Center (CCRC), Physical Science and Engineering (PSE) Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia
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Lei X, Wang W, Gao J, Wang S, Wang W. Atmospheric Chemistry of Enols: The Formation Mechanisms of Formic and Peroxyformic Acids in Ozonolysis of Vinyl Alcohol. J Phys Chem A 2020; 124:4271-4279. [PMID: 32369366 DOI: 10.1021/acs.jpca.0c01480] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Vinyl alcohol (VA), for a long time, is thought to be a missing source of formic acid (FA) in the atmospheric models. However, a recent study has shown that FA is just a byproduct in the OH-initiated oxidation of VA, which stimulates investigation on the other sinks of VA in the atmosphere. In this study, the detailed ozonolysis mechanism of VA was investigated theoretically for the first time. The results show that two primary ozonides (syn- and anti-POZ) can be formed in the ozonolysis of VA and that FA coupled with the simplest Criegee intermediate (CH2OO) can be produced as the main nascent products. Thus, the ozonolysis of VA is predicted to be a more efficient process to produce FA in the atmosphere compared with its OH-initiated oxidation. Moreover, it is found that the syn-POZ can directly decompose to peroxyformic acid plus formaldehyde, breaking the known "Criegee mechanism" to form carbonyl oxide with carbonyl compound. This special mechanism by providing a new source of peroxy acids in the atmosphere enriches the atmospheric chemistry of enols. The atmospheric lifetime of VA by ozonolysis is predicted to be 30 h, comparable with its prevalent reaction with the OH radical. Therefore, the obtained theoretical results can be usefully incorporated into a future modeling study of enols.
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Affiliation(s)
- Xiaoyang Lei
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an 710119, Shaanxi, China
| | - Weina Wang
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an 710119, Shaanxi, China
| | - Jiemiao Gao
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an 710119, Shaanxi, China
| | - Sainan Wang
- State Key Laboratory of Organic Geochemistry and Guangdong Key Laboratory of Environmental Protection and Resources Utilization, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640, Guangdong, China
| | - Wenliang Wang
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi'an 710119, Shaanxi, China
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Monge-Palacios M, Grajales-González E, Kukkadapu G, Sarathy SM. Kinetics of the benzyl + HO 2 and benzoxyl + OH barrierless association reactions: fate of the benzyl hydroperoxide adduct under combustion and atmospheric conditions. Phys Chem Chem Phys 2020; 22:9029-9039. [PMID: 32293625 DOI: 10.1039/d0cp00752h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Radical-radical association reactions are challenging to address theoretically due to difficulties finding the bottleneck that variationally minimizes the reactive flux. For this purpose, the variable reaction coordinate (VRC) formulation of the variational transition state theory (VTST) represents an appropriate tool. In this work, we revisited the kinetics of two radical-radical association reactions of importance in combustion modelling and poly-aromatic hydrocarbon (PAH) chemistry by performing VRC calculations: benzyl + HO2 and benzoxyl + OH, both forming the adduct benzyl hydroperoxide. Our calculated rate constants are significantly lower than those previously reported based on VTST calculations, which results from a more efficient minimization of the reactive flux through the bottleneck achieved by the VRC formulation. Both reactions show different trends in the variation of their rate constants with temperature. We observed that if the pair of single occupied molecular orbitals (SOMOs) of the associating radicals show a similar nature, i.e. similar character, and thereby a small energy gap, a highly stabilized transition state structure is formed as the result of a very efficient SOMO-SOMO overlap, which may cancel out the free energy bottleneck for the formation of the adduct and result in large rate constants with a negative temperature dependence. This is the case of the benzoxyl and OH radical pair, whose SOMOs show O2p nature with an energy gap of 20.2 kcal mol-1. On the other hand, the benzyl and HO2 radical pair shows lower rate constants with a positive temperature dependence due to the larger difference between both SOMOs (a 28.9 kcal mol-1 energy gap) as a consequence of the contribution of the multiple resonance structures of the benzyl radical. The reverse dissociation rate constants were also calculated using multi-structural torsional anharmonicity partition functions, which were not included in previous work, and the results show a much slower dissociation of benzyl hydroperoxide. Our work may help to improve kinetic models of interest in combustion and PAH formation, as well as to gain further understanding of radical-radical association reactions, which are ubiquitous in different environments.
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Affiliation(s)
- M Monge-Palacios
- King Abdullah University of Science and Technology (KAUST), Clean Combustion Research Center (CCRC), Physical Science and Engineering (PSE), Thuwal 23955-6900, Saudi Arabia.
| | - Edwing Grajales-González
- King Abdullah University of Science and Technology (KAUST), Clean Combustion Research Center (CCRC), Physical Science and Engineering (PSE), Thuwal 23955-6900, Saudi Arabia.
| | - Goutham Kukkadapu
- Lawrence Livermore National Laboratory, 7000 East Avenue, Livermore, CA 94551, USA
| | - S Mani Sarathy
- King Abdullah University of Science and Technology (KAUST), Clean Combustion Research Center (CCRC), Physical Science and Engineering (PSE), Thuwal 23955-6900, Saudi Arabia.
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Mardyukov A, Eckhardt AK, Schreiner PR. 1,1-Ethenediol: The Long Elusive Enol of Acetic Acid. Angew Chem Int Ed Engl 2020; 59:5577-5580. [PMID: 31899845 PMCID: PMC7154680 DOI: 10.1002/anie.201915646] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2019] [Indexed: 01/17/2023]
Abstract
We present the first spectroscopic identification of hitherto unknown 1,1-ethenediol, the enol tautomer of acetic acid. The title compound was generated in the gas phase through flash vacuum pyrolysis of malonic acid at 400 °C. The pyrolysis products were subsequently trapped in argon matrices at 10 K and characterized spectroscopically by means of IR and UV/Vis spectroscopy together with matching its spectral data with computations at the CCSD(T)/cc-pCVTZ and B3LYP/6-311++G(2d,2p) levels of theory. Upon photolysis at λ=254 nm, the enol rearranges to acetic acid and ketene.
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Affiliation(s)
- Artur Mardyukov
- Institute of Organic ChemistryJustus Liebig UniversityHeinrich-Buff-Ring 1735392GiessenGermany
| | - André K. Eckhardt
- Institute of Organic ChemistryJustus Liebig UniversityHeinrich-Buff-Ring 1735392GiessenGermany
| | - Peter R. Schreiner
- Institute of Organic ChemistryJustus Liebig UniversityHeinrich-Buff-Ring 1735392GiessenGermany
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Association of Cl with C 2H 2 by unified variable-reaction-coordinate and reaction-path variational transition-state theory. Proc Natl Acad Sci U S A 2020; 117:5610-5616. [PMID: 32123079 DOI: 10.1073/pnas.1920018117] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Barrierless unimolecular association reactions are prominent in atmospheric and combustion mechanisms but are challenging for both experiment and kinetics theory. A key datum for understanding the pressure dependence of association and dissociation reactions is the high-pressure limit, but this is often available experimentally only by extrapolation. Here we calculate the high-pressure limit for the addition of a chlorine atom to acetylene molecule (Cl + C2H2→C2H2Cl). This reaction has outer and inner transition states in series; the outer transition state is barrierless, and it is necessary to use different theoretical frameworks to treat the two kinds of transition state. Here we study the reaction in the high-pressure limit using multifaceted variable-reaction-coordinate variational transition-state theory (VRC-VTST) at the outer transition state and reaction-path variational transition state theory (RP-VTST) at the inner turning point; then we combine the results with the canonical unified statistical (CUS) theory. The calculations are based on a density functional validated against the W3X-L method, which is based on coupled cluster theory with single, double, and triple excitations and a quasiperturbative treatment of connected quadruple excitations [CCSDT(Q)], and the computed rate constants are in good agreement with some of the experimental results. The chlorovinyl (C2H2Cl) adduct has two isomers that are equilibrium structures of a double-well C≡C-H bending potential. Two procedures are used to calculate the vibrational partition function of chlorovinyl; one treats the two isomers separately and the other solves the anharmonic energy levels of the double well. We use these results to calculate the standard-state free energy and equilibrium constant of the reaction.
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Mardyukov A, Eckhardt AK, Schreiner PR. 1,1‐Ethendiol – Das lange Zeit schwer fassbare Enol der Essigsäure. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.201915646] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Artur Mardyukov
- Institute of Organic Chemistry Justus Liebig University Heinrich-Buff-Ring 17 35392 Giessen Deutschland
| | - André K. Eckhardt
- Institute of Organic Chemistry Justus Liebig University Heinrich-Buff-Ring 17 35392 Giessen Deutschland
| | - Peter R. Schreiner
- Institute of Organic Chemistry Justus Liebig University Heinrich-Buff-Ring 17 35392 Giessen Deutschland
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