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Asatryan R, Hudzik J, Swihart M. Intramolecular Catalytic Hydrogen Atom Transfer (CHAT). J Phys Chem A 2024; 128:2169-2190. [PMID: 38451855 DOI: 10.1021/acs.jpca.3c06794] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/09/2024]
Abstract
Intramolecular catalysis (IntraCat) is the acceleration of a process at one site of a molecule catalyzed by a functional group in the same molecule; an external agent such as a solvent typically facilitates it. Here, we report a general first-principles-based IntraCat mechanism, which strictly occurs within a single molecule with no coreagent being involved─we call it intramolecular catalytic transfer of hydrogen atoms (CHAT). A reactive part of a molecule (chat catalyst moiety or chat agent, represented by -OOH, -COOH, -SH, -CH2OH, -HPO4, or another bifunctional H-donor/acceptor group) catalyzes an interconversion process, such as keto-enol or amino-imino tautomerization, and cyclization in the same molecule, while being regenerated in the process. It can thus be regarded as an intramolecular version of the intermolecular H atom transfer processes mediated by an external molecular catalyst, e.g., dihydrogen, water, or a carboxylic acid. Earlier, we proposed a general mechanistic systematization of intermolecular processes, illustrated in the simplest case of the H2-mediated reactions classified as dihydrogen catalysis [Asatryan, R.; et al. Catal. Rev.: Sci. Eng., 2014, 56, 403-475]. Following this systematization, the CHAT catalysis belongs to the category of relay transfer of H atoms, albeit in an intramolecular manner. A broader class of intramolecular processes includes all types of H-transfer reactions stimulated by an H-migration, which we call self-catalyzed H atom transfer (SC-HAT). The CHAT mechanism comprises a subset of SC-HAT in which the catalytic moiety is regenerated (i.e., acts as a true catalyst and not a reagent). We provide several characteristic examples of CHAT mechanism based on detailed analysis of the corresponding potential energy surfaces. All such cases showed a dramatically reduced activation barrier relative to the corresponding uncatalyzed H-transfer reactions. For example, we show that CHAT can facilitate long-range H-migration in larger molecules and can occur multiple times in one molecule with multiple interconverting groups. It also facilitates amino-imino tautomerization of unsaturated GABA-analogues and peptides, as well as intramolecular cyclization processes to form heterocycles, e.g., oxygenated rings. CHAT pathways may also explain the pH-dependent increase of mutarotation rate of glucose-6-phosphate demonstrated in pioneering experiments that introduced the classical IntraCat concept. In addition, we identify a ground electronic state CHAT pathway as an alternative to the UV-promoted long-range molecular crane keto-enol conversion with a remarkably low activation energy. To initially assess the possible impact of the new keto-enol conversion pathway on combustion of n-alkanes, we present a detailed kinetic analysis of isomerization and decomposition of pentane-2,4-ketohydroperoxide (2,4-KHP). The results are compared with key alternative reactions, including direct dissociation and Korcek channels (for which a new alkyl group migration channel is also identified), revealing the competitiveness of the CHAT pathway across a range of conditions. Taken together, this work provides insight into a general class of reaction pathways that has not previously being systematically considered and that may occur in a broad range of contexts from combustion to atmospheric chemistry to biochemistry.
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Affiliation(s)
- Rubik Asatryan
- Department of Chemical and Biological Engineering, and Center for Hybrid Rocket Exascale Simulation Technology (CHREST), University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
| | - Jason Hudzik
- Department of Chemical and Biological Engineering, and Center for Hybrid Rocket Exascale Simulation Technology (CHREST), University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
| | - Mark Swihart
- Department of Chemical and Biological Engineering, and Center for Hybrid Rocket Exascale Simulation Technology (CHREST), University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
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Khachatryan L, Barekati-Goudarzi M, Asatryan R, Ozarowski A, Boldor D, Lomnicki SM, Cormier SA. Metal-Free Biomass-Derived Environmentally Persistent Free Radicals (Bio-EPFRs) from Lignin Pyrolysis. ACS OMEGA 2022; 7:30241-30249. [PMID: 36061701 PMCID: PMC9434622 DOI: 10.1021/acsomega.2c03381] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Accepted: 08/04/2022] [Indexed: 06/15/2023]
Abstract
To assess contribution of the radicals formed from biomass burning, our recent findings toward the formation of resonantly stabilized persistent radicals from hydrolytic lignin pyrolysis in a metal-free environment are presented in detail. Such radicals have particularly been identified during fast pyrolysis of lignin dispersed into the gas phase in a flow reactor. The trapped radicals were analyzed by X-band electron paramagnetic resonance (EPR) and high-frequency (HF) EPR spectroscopy. To conceptualize available data, the metal-free biogenic bulky stable radicals with extended conjugated backbones are suggested to categorize as a new type of metal-free environmentally persistent free radicals (EPFRs) (bio-EPFRs). They can be originated not only from lignin/biomass pyrolysis but also during various thermal processes in combustion reactors and media, including tobacco smoke, anthropogenic sources and wildfires (forest/bushfires), and so on. The persistency of bio-EPFRs from lignin gas-phase pyrolysis was outlined with the evaluated lifetime of two groups of radicals being 33 and 143 h, respectively. The experimental results from pyrolysis of coniferyl alcohol as a model compound of lignin in the same fast flow reactor, along with our detailed potential energy surface analyses using high-level DFT and ab initio methods toward decomposition of a few other model compounds reported earlier, provide a mechanistic view on the formation of C- and O-centered radicals during lignin gas-phase pyrolysis. The preliminary measurements using HF-EPR spectroscopy also support the existence of O-centered radicals in the radical mixtures from pyrolysis of lignin possessing a high g value (2.0048).
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Affiliation(s)
- Lavrent Khachatryan
- Department
of Chemistry, Louisiana State University, Baton Rouge, Louisiana 70803, United States
| | | | - Rubik Asatryan
- Department
of Chemical and Biological Engineering, University at Buffalo, The State University of New York, Buffalo, New York 14260, United States
| | - Andrew Ozarowski
- National
High Magnetic Field Laboratory, 1800 East Paul Dirac Drive, Florida, Tallahassee 32310, United States
| | - Dorin Boldor
- Department
of Biological and Agricultural Engineering, LSU AgCenter and LSU A&M College, Baton Rouge, Louisiana 70803, United States
| | - Slawomir M. Lomnicki
- Department
of Environmental Sciences, Louisiana State
University, Baton Rouge, Louisiana 70803, United States
| | - Stephania A. Cormier
- Department
of Biological Sciences, LSU Superfund Research
Program and Pennington Biomedical Research Center, Baton Rouge, Louisiana 70808, United States
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Mesoporous Manganese Oxide/Lignin-Derived Carbon for High Performance of Supercapacitor Electrodes. Molecules 2021; 26:molecules26237104. [PMID: 34885695 PMCID: PMC8658856 DOI: 10.3390/molecules26237104] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2021] [Revised: 11/16/2021] [Accepted: 11/22/2021] [Indexed: 11/17/2022] Open
Abstract
This study explores the modification of lignin with surfactants, which can be used as a template to make mesoporous structures, and can also be used in combination with manganese oxide to produce manganese oxide/lignin-derived carbon. Organosolv extraction, using ethanol (70%) at 150 °C, was carried out to extract lignin from oil palm wood. Lignin was then mixed with Pluronic F-127, with and without Mn(NO3)2, and then crosslinked with acidic formaldehyde, resulting in a carbon precursor-based modified lignin. Carbonization was carried out at 900 °C to produce lignin-derived carbon and manganese oxide/lignin-derived carbon. The characterization materials included Fourier transform infrared (FTIR) spectroscopy, scanning electron microscope-energy dispersive X-ray (SEM-EDX) mapping, X-ray diffraction (XRD), and N2-sorption analysis. FTIR curves displayed the vibration bands of lignin and manganese oxide. SEM images exhibited the different morphological characteristics of carbon from LS120% (lignin with a Pluronic surfactant of 120%) and LS120%Mn20% (lignin with a Pluronic of 120% and Mn oxide of 20%). Carbon LS120% (C-LS120%) showed the highest specific surface area of 1425 m2/g with a mean pore size of 3.14 nm. The largest mean pore size of 5.23 nm with a specific surface area of 922 m2/g was exhibited by carbon LS120%-Mn20% (C-LS120%-Mn20%). C-LS120%Mn20% features two phases of Mn oxide crystals. The highest specific capacitance of 345 F/g was exhibited by C-LS120%-Mn20%.
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Sun Y, Chen X, Xu F, Wang X. Quantum chemical calculations on the mechanism and kinetics of ozone-initiated removal of p-coumaryl alcohol in the atmosphere. CHEMOSPHERE 2020; 253:126744. [PMID: 32302911 DOI: 10.1016/j.chemosphere.2020.126744] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/13/2020] [Revised: 04/03/2020] [Accepted: 04/06/2020] [Indexed: 06/11/2023]
Abstract
p-Coumaryl alcohol (p-CMA), as the simplest lignin precursor, was determined in the process of lignin polymer degradation and wood smoke. However, its transformation and migration in the atmosphere have not been well clarified. In this work, the gas-phase reaction mechanisms and kinetic parameters of ozone-initiated removal of p-CMA were performed by using quantum chemical calculations. Seven primary addition reaction pathways were summarized. A more comprehensive and detailed reaction routes of the favorable Criegee intermediate (IM9) were presented, including the reactions with small molecules, as well as its own isomerization and decomposition reactions. p-Hydroxybenzaldehyde (P1) is the most dominant product in the further reactions of IM9 and the subsequent ozonolysis mechanisms of P1 also were elucidated. All thermodynamic calculations were investigated on the density functional theory (DFT) method at the M06-2X/6-311 + G (3df, 2p)//M06-2X/6-311 + G (d,p) level. The overall and individual rate constants have estimated by using the KiSThelP under typical atmospheric temperature (198-338 K) and pressure. The total rate constant is 3.37 × 10-16 cm3 molecule-1 s-1 at 298 K and 1 atm. In addition, the atmospheric lifetime of p-CMA by ozone-determined is 1.18 h under the average ozone concentration of 7 × 1011 molecules cm-3. The short lifetime indicates that the degradation processes of p-CMA determined by O3 cannot be ignored, especially in areas where the tip concentration of O3 molecules is high. The present study provides a synthetical investigation on ozonolysis of p-CMA for the first time and enriches our understanding of atmospheric oxidation processes of other lignin compounds.
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Affiliation(s)
- Yanhui Sun
- College of Environment and Safety Engineering, Qingdao University of Science and Technology, Qingdao, 266042, PR China; Key Laboratory of Theoretical Chemistry of Environment, Ministry of Education, School of Chemistry & Environment, South China Normal University, Guangzhou, 510006, PR China.
| | - Xiaoxiao Chen
- College of Environment and Safety Engineering, Qingdao University of Science and Technology, Qingdao, 266042, PR China
| | - Fei Xu
- Environment Research Institute, Shandong University, Qingdao, 266237, PR China
| | - Xiaotong Wang
- College of Environment and Safety Engineering, Qingdao University of Science and Technology, Qingdao, 266042, PR China
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Hudzik JM, Bozzelli JW, Asatryan R, Ruckenstein E. OH-Initiated Reactions of para-Coumaryl Alcohol Relevant to the Lignin Pyrolysis. Part III. Kinetics of H-Abstraction by H, OH, and CH 3 Radicals. J Phys Chem A 2020; 124:4905-4915. [PMID: 32432474 DOI: 10.1021/acs.jpca.9b11898] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Lignin is the most complex component of biomass, and development of a detailed chemical kinetic model for biomass pyrolysis mainly relies on the understanding of the lignin decomposition kinetics. para-Coumaryl alcohol (p-CMA, HOPh-CH═CH-CH2OH), the focus of our analysis, is the simplest of the lignin monomers (monolignols) containing a typical side-chain double bond and both alkyl- and phenolic-type OH-groups. In parts I and II of our work (Asatryan, R. J. Phys. Chem. A 2019, 123, 2570-2585; Hudzik, J. M. J. Phys. Chem. A 2020, current issue), we created a detailed potential energy surface (PES) and performed a kinetic analysis of chemically activated, unimolecular, and bimolecular reactions pathways for p-CMA + OH. Reaction pathways analyzed include dissociation, intramolecular abstraction, group transfer, and elimination processes. The α- and β-carbon addition reactions generate 1,3- (RA1) and 1,2-diol (RB1) adduct radicals, respectively. Well depths are approximately 29 and 41 kcal/mol below the p-CMA + OH entrance level. Kinetic analysis aides in determining the major pathways for our conventional and fractional pyrolysis experiments. The current paper focuses on the H-abstraction reactions via H, OH, and CH3 light ("pool") radicals from p-CMA. The thermochemical properties of all stable, radical, and transition-state species were determined using the ωB97XD density functional theory (DFT) and higher-level CBS-QB3 composite methods. Barrier heights from the prereaction complexes, for OH-radical abstractions, to the transition states for the propanoid side chain are compared to the model H-abstraction reactions of allyl alcohol (AA) with OH and p-CMA with H and CH3 radicals. The lowest-energy, most stable, p-CMA radical formed is at the C9 allylic position (p-CMA-C9j) with exothermicity of 26.63, 41.32, and 27.34 kcal/mol for H, OH, and CH3, respectively. For OH-radical abstraction at this position, our findings are consistent with corresponding data on AA + OH at 37.44 kcal/mol and similar to that of RB1. A similar stable radical with an exothermicity of 34.95 kcal/mol occurs for the phenol hydroxyl group, generating the p-CMA-O4j radical. H-abstraction pathways are considered in relation to other major pathways previously considered for p-CMA + OH reactions including H-atom shifts, dehydration, and β-scission reactions. Derived rate coefficients for substituted phenols can be utilized in detailed kinetic models for lignin/biomass pyrolysis.
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Affiliation(s)
- Jason M Hudzik
- Department of Chemistry and Environmental Science, New Jersey Institute of Technology, Newark, New Jersey 07102, United States
| | - Joseph W Bozzelli
- Department of Chemistry and Environmental Science, New Jersey Institute of Technology, Newark, New Jersey 07102, United States
| | - Rubik Asatryan
- Department of Chemical and Biological Engineering, University at Buffalo, The State University of New York, Buffalo, New Jersey 14226, United States
| | - Eli Ruckenstein
- Department of Chemical and Biological Engineering, University at Buffalo, The State University of New York, Buffalo, New Jersey 14226, United States
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Hudzik JM, Barekati-Goudarzi M, Khachatryan L, Bozzelli JW, Ruckenstein E, Asatryan R. OH-Initiated Reactions of para-Coumaryl Alcohol Relevant to the Lignin Pyrolysis. Part II. Kinetic Analysis. J Phys Chem A 2020; 124:4875-4904. [DOI: 10.1021/acs.jpca.9b11894] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Jason M. Hudzik
- Department of Chemistry and Environmental Science, New Jersey Institute of Technology, Newark, New Jersey 07102, United States
| | | | - Lavrent Khachatryan
- Department of Chemistry, Louisiana State University, Baton Rouge, Louisiana 70803, United States
| | - Joseph W. Bozzelli
- Department of Chemistry and Environmental Science, New Jersey Institute of Technology, Newark, New Jersey 07102, United States
| | - Eli Ruckenstein
- Department of Chemical and Biological Engineering, University at Buffalo, The State University of New York, Buffalo, New York 14226, United States
| | - Rubik Asatryan
- Department of Chemical and Biological Engineering, University at Buffalo, The State University of New York, Buffalo, New York 14226, United States
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