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Tkachenko DV, Larionov RA, Ziganshina SA, Khayarov KR, Klimovitskii AE, Babaeva OB, Gorbatchuk VV, Ziganshin MA. Cyclization of alanyl-valine dipeptides in the solid state. The effects of molecular radiator and heat capacity. Phys Chem Chem Phys 2024. [PMID: 39440569 DOI: 10.1039/d4cp02795g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2024]
Abstract
Heating of linear dipeptides above a critical temperature initiates their cyclization even in the solid state. This method of obtaining cyclic dipeptides meets the requirements of "green chemistry", provides a high yield of the main product and releases only water as a by-product of the reaction, and does not require solvents. However, to date, the cyclization of only a small number of dipeptides in the solid state has been studied, and some correlations of the process were discovered. The influence of the structure of dipeptide molecules and their crystal packing on the kinetics of solid-state cyclization is still not fully understood. In this work, the cyclization of L-alanyl-L-valine in the solid state upon heating was studied. Using non-isothermal kinetic approaches, the kinetic parameters of this reaction and the optimal kinetic model describing this process were determined. The effect of the features of the crystal packing of dipeptides and their heat capacity on the temperature of the cyclization in the solid state was analyzed. This study expands our knowledge about solid-state reactions involving dipeptides and the ability to control such reactions.
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Affiliation(s)
- Daria V Tkachenko
- Alexander Butlerov Institute of Chemistry, Kazan (Volga Region) Federal University, 18 ul. Kremlyovskaya, 420008 Kazan, Russian Federation.
| | - Radik A Larionov
- Alexander Butlerov Institute of Chemistry, Kazan (Volga Region) Federal University, 18 ul. Kremlyovskaya, 420008 Kazan, Russian Federation.
| | - Sufia A Ziganshina
- Alexander Butlerov Institute of Chemistry, Kazan (Volga Region) Federal University, 18 ul. Kremlyovskaya, 420008 Kazan, Russian Federation.
| | - Khasan R Khayarov
- Alexander Butlerov Institute of Chemistry, Kazan (Volga Region) Federal University, 18 ul. Kremlyovskaya, 420008 Kazan, Russian Federation.
| | - Aleksandr E Klimovitskii
- Alexander Butlerov Institute of Chemistry, Kazan (Volga Region) Federal University, 18 ul. Kremlyovskaya, 420008 Kazan, Russian Federation.
| | - Olga B Babaeva
- A.E. Arbuzov Institute of Organic and Physical Chemistry, RAS, Kazan, 420088, Russia
| | - Valery V Gorbatchuk
- Alexander Butlerov Institute of Chemistry, Kazan (Volga Region) Federal University, 18 ul. Kremlyovskaya, 420008 Kazan, Russian Federation.
| | - Marat A Ziganshin
- Alexander Butlerov Institute of Chemistry, Kazan (Volga Region) Federal University, 18 ul. Kremlyovskaya, 420008 Kazan, Russian Federation.
- Academy of Sciences of the Republic of Tatarstan, Kazan, 420111, Russia
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Bolognesi P, Avaldi L. Photoelectron-photoion(s) coincidence studies of molecules of biological interest. Phys Chem Chem Phys 2022; 24:22356-22370. [PMID: 36124990 DOI: 10.1039/d2cp03079a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Photoelectron-photoion(s) coincidence, PEPICO, experiments with synchrotron radiation have become one of the most powerful tools to investigate dissociative photoionization thanks to their selectivity. In this paper their application to the study of molecular species of biological interest in the gas phase is reviewed. Some applications of PEPICO to the study of potential radiosensitizers, amino acids and small peptides and opportunities offered by the advent of novel methods for the production of beams of these molecules are discussed.
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Affiliation(s)
- P Bolognesi
- CNR-Istituto di Struttura della Materia, Area della Ricerca di Roma 1, CP 10 00015 Monterotondo Scalo, Italy.
| | - L Avaldi
- CNR-Istituto di Struttura della Materia, Area della Ricerca di Roma 1, CP 10 00015 Monterotondo Scalo, Italy.
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Water admixture triggers the self-assembly of the glycyl-glycine thin film at the presence of organic vapors. Colloids Surf A Physicochem Eng Asp 2022. [DOI: 10.1016/j.colsurfa.2022.129541] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Qu B, Han Y, Liang T, Zhang C, Hou G, Gao F. Evaluation of a novel EphA2 targeting peptide for triple negative breast cancer based on radionuclide molecular imaging. ARAB J CHEM 2022. [DOI: 10.1016/j.arabjc.2022.104211] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022] Open
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