1
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Norvaiša K, O'Brien JE, Osadchuk I, Twamley B, Borovkov V, Senge MO. Importance of molecular symmetry for enantiomeric excess recognition by NMR. Chem Commun (Camb) 2022; 58:5423-5426. [PMID: 35416216 DOI: 10.1039/d2cc01319c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Recently prochiral solvating agents (pro-CSA) came under the spotlight for the detection of enantiopurity by NMR. Chemical shift non-equivalency in achiral hosts introduced by the presence of chiral guests yields observable resonance signal splitting (Δδ) correlating to the enantiomeric excess (e.e.). In this work, symmetry is our lens to explain porphyrin-based supramolecular receptor activity in a chiral environment. Based on extensive NMR analyses of the atropisomeric receptors, the host symmetry is shown to be affected by porphyrin nonplanarity and further desymmetrized in the presence of a chiral guest. As such, the exposed porphyrin inner core (N-H), with its strong hydrogen bond abilities, for the first time, has been exploited in enantiomeric composition analysis. Our approach in e.e. detection by N-H signals appearing in a previously underutilized region of the spectrum (below 0 ppm) shows chemical shift splitting (Δδ) three times more sensitive to enantiomeric compositions than previously reported systems.
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Affiliation(s)
- Karolis Norvaiša
- School of Chemistry, Chair of Organic Chemistry, Trinity Biomedical Sciences Institute, 152-160 Pearse Street, Trinity College Dublin, The University of Dublin, Dublin 2, Ireland
| | - John E O'Brien
- School of Chemistry, Trinity College Dublin, The University of Dublin, Dublin 2, Ireland
| | - Irina Osadchuk
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Akadeemia tee 15, Tallinn 12618, Estonia
| | - Brendan Twamley
- School of Chemistry, Trinity College Dublin, The University of Dublin, Dublin 2, Ireland
| | - Victor Borovkov
- Department of Chemistry and Biotechnology, Tallinn University of Technology, Akadeemia tee 15, Tallinn 12618, Estonia
| | - Mathias O Senge
- School of Chemistry, Chair of Organic Chemistry, Trinity Biomedical Sciences Institute, 152-160 Pearse Street, Trinity College Dublin, The University of Dublin, Dublin 2, Ireland.,Institute for Advanced Study (TUM-IAS) Technical University of Munich, Focus Group - Molecular and Interfacial Engineering of Organic Nanosystems, Lichtenbergstrasse 2a, D-85748 Garching, Germany.
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2
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P. Hill J, Karr PA, Zuñiga Uy RA, Subbaiyan NK, Futera Z, Ariga K, Ishihara S, Labuta J, D’Souza F. Analyte Interactions with Oxoporphyrinogen Derivatives: Computational Aspects. CURR ORG CHEM 2022. [DOI: 10.2174/1385272826666220208101325] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Abstract:
The binding of anions by highly-coloured chromophore compounds is of interest from the point-of-view of the development of optical sensors for analyte species. In this review, we have summarised our work on the interactions between oxoporphyrinogen type host compounds and different analyte species using computational methods. The origin of our interest in sensing using oxoporphyrinogens stems from an initial finding involving anion-host interactions involving a conjugated oxoporphyrinogen molecule. This review starts from that point, introducing some additional exemplary anion binding data, which is then elaborated to include descriptions of our synthesis work towards multitopic and ion pair interactions. In all the projects, we have consulted computational data on host structure and host-guest complexes in order to obtain information about the interactions occurring during complexation. Density functional theory and molecular dynamics simulations have been extensively used for these purposes. Oxoporphyrinogens are highly colored synthetically flexible compounds whose interactions with anions, ion pairs, and other species have been modelled using computational methods.
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Affiliation(s)
- Jonathan P. Hill
- WPI-Center for Materials Nanoarchitectonics, National Institute for Materials Science, Namiki 1-1, Tsukuba, Ibaraki 305-0044, Japan
| | - Paul A. Karr
- Department of Physical Sciences and Mathematics, Wayne State College, 111 Main Street, Wayne, Nebraska 68787, USA
| | - Roxanne A. Zuñiga Uy
- Department of Chemistry, University of North Texas, 1155 Union Circle, 305070 Denton, Texas 76203, USA
| | - Navaneetha K. Subbaiyan
- Department of Chemistry, University of North Texas, 1155 Union Circle, 305070 Denton, Texas 76203, USA
| | - Zdeněk Futera
- Institute of Physics, Faculty of Science, University of South Bohemia, Branišovská 1760, České Budějovice 370 05, Czech Republic
| | - Katsuhiko Ariga
- WPI-Center for Materials Nanoarchitectonics, National Institute for Materials Science, Namiki 1-1, Tsukuba, Ibaraki 305-0044, Japan
| | - Shinsuke Ishihara
- WPI-Center for Materials Nanoarchitectonics, National Institute for Materials Science, Namiki 1-1, Tsukuba, Ibaraki 305-0044, Japan
| | - Jan Labuta
- WPI-Center for Materials Nanoarchitectonics, National Institute for Materials Science, Namiki 1-1, Tsukuba, Ibaraki 305-0044, Japan
| | - Francis D’Souza
- WPI-Center for Materials Nanoarchitectonics, National Institute for Materials Science, Namiki 1-1, Tsukuba, Ibaraki 305-0044, Japan
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3
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Khalil A, Kashif M. Nuclear Magnetic Resonance Spectroscopy for Quantitative Analysis: A Review for Its Application in the Chemical, Pharmaceutical and Medicinal Domains. Crit Rev Anal Chem 2021; 53:997-1011. [PMID: 34752175 DOI: 10.1080/10408347.2021.2000359] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/21/2023]
Abstract
Nuclear magnetic resonance (NMR) is a rapid and accurate analytical tool for qualification and quantification. The capacity of NMR of being quantitative can also justify the calibration of other analytical methods. In pharmaceutical domain, quantitative NMR (qNMR) can be applied in the identification and quantification of drug simultaneously. The early drug development stage requires a minimum sample for analysis. Thus, priority should be given to utilize this technique to attain results with least investment, rapid analysis time and minimum sample consumption. This technique is a significant phenomenon to identify impurities, drug substance, residual solvents of in-process control (IPC) samples and characterizing the formulations. From an analyst's perspective, qNMR proved to be a routine practice in pharmaceutical industry to qualify any drug product. The absolute and relative methods offer great help in quantifying the component of interest in the process control samples and finished products. This review highlights the evolution of NMR application in the pharmaceutical industry, where determining the purity of drug substance, drug product and establishing the identity of impurities and its level are the challenging aspects. NMR in medicinal field emerging as a numero uno for Covid-19 severity detection and its dire consequences, accelerated vaccine development and the mapping of SAR-COV-2 RNA and proteins via chemical shift assignments.
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Affiliation(s)
- Adila Khalil
- Analytical Chemistry Section, Department of Chemistry, Aligarh Muslim University, Aligarh, Uttar Pradesh, India
| | - Mohammad Kashif
- Analytical Chemistry Section, Department of Chemistry, Aligarh Muslim University, Aligarh, Uttar Pradesh, India
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4
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Abstract
Chiral molecules possess enantiomers that have non-superimposable chemical structures but exhibit identical nuclear magnetic resonance (NMR) spectra. This feature prevents the use of NMR spectroscopic methods for the determination of enantiomeric excesses (ee) of chiral molecules, using simple mixtures of their enantiomers. Recently, however, it was reported that the addition of a symmetrical prochiral molecule (a reporter or host) into a solution of chiral analyte can lead to estimation of ee through interactions involving rapid exchange of the chiral analyte (guest) in the formed host–guest complex. This is due to the ee-dependent splitting of NMR resonances of the prochiral host molecule based on averaging the chemical shift non-equivalency caused by the presence of a chiral guest. The mechanism is not dependent on diastereomer formation, and 1:1 host–guest complexes can also show ee-dependent NMR peak splitting. Prochiral molecules capable of ee sensing using the NMR technique are now referred to as so-called prochiral solvating agents (pro-CSAs). pro-CSAs represent a family of reagents distinct from the commonly used NMR chiral derivatizing reagents (where chiral auxiliaries are used to derivatize enantiomers to diastereomers) or chiral solvating agents (where chiral auxiliaries interact in an asymmetric manner with analyte enantiomers). pro-CSA methods are unique since neither pro-CSA nor NMR contains chiral factors, making the technique neutral with respect to chirality. Here, we review our recent work on this matter involving several different nominally achiral receptor molecules whose unique guest binding properties and solution characteristics (especially with regard to NMR spectroscopy) allow for the estimation of ee in the corresponding chiral guests.
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5
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Takimoto K, Ishihara S, Labuta J, Březina V, Payne DT, Hill JP, Ariga K, Sumita M, Mori S, Sato H. Enantiomeric Excess Dependent Splitting of NMR Signal through Dynamic Chiral Inversion and Coligand Exchange in a Coordination Complex. J Phys Chem Lett 2020; 11:8164-8169. [PMID: 32902288 DOI: 10.1021/acs.jpclett.0c02284] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Nuclear magnetic resonance (NMR) spectroscopy cannot be used to discriminate enantiomers, and NMR resonances of enantiomeric mixtures are generally not affected by enantiomeric excess (ee). Here, we report that a coordination complex (L·2Zn·3C), where L is a salen-like prochiral ligand and C is an exchangeable acetate coligand, exhibits symmetrical splitting of one of the 1H NMR resonances of L with the degree of splitting linearly proportional to ee of the chiral guest coligand C, 2-phenoxypropionic acid. Despite the well-defined chirality in the crystal structure of L·2Zn·3C, concurrent fast chiral inversion and coligand exchange in solution renders L·2Zn·3C the primary example of prochiral solvating agent (pro-CSA) based on a coordination complex. Notably, the NMR resonances remain split even in dilute solution due to the lack of chiral guest dissociation in the coligand exchange system. This work provides new insights into chiral transfer events in metal-ligand complexes.
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Affiliation(s)
- Kazuyoshi Takimoto
- Graduate School of Science and Engineering, Ehime University, Matsuyama, Ehime 790-8577, Japan
- International Center for Materials Nanoarchitectonics (WPI-MANA), National Institute for Materials Science (NIMS), Tsukuba, Ibaraki 305-0044, Japan
| | - Shinsuke Ishihara
- International Center for Materials Nanoarchitectonics (WPI-MANA), National Institute for Materials Science (NIMS), Tsukuba, Ibaraki 305-0044, Japan
| | - Jan Labuta
- International Center for Materials Nanoarchitectonics (WPI-MANA), National Institute for Materials Science (NIMS), Tsukuba, Ibaraki 305-0044, Japan
| | - Václav Březina
- Department of Macromolecular Physics, Faculty of Mathematics and Physics, Charles University, V Holešovičkách 2, 180 00 Prague 8, Czech Republic
| | - Daniel T Payne
- International Center for Young Scientists (ICYS), National Institute for Materials Science (NIMS), Tsukuba, Ibaraki 305-0044, Japan
| | - Jonathan P Hill
- International Center for Materials Nanoarchitectonics (WPI-MANA), National Institute for Materials Science (NIMS), Tsukuba, Ibaraki 305-0044, Japan
| | - Katsuhiko Ariga
- International Center for Materials Nanoarchitectonics (WPI-MANA), National Institute for Materials Science (NIMS), Tsukuba, Ibaraki 305-0044, Japan
- Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba 277-8561, Japan
| | - Masato Sumita
- International Center for Materials Nanoarchitectonics (WPI-MANA), National Institute for Materials Science (NIMS), Tsukuba, Ibaraki 305-0044, Japan
- Center for Advanced Intelligence Project, RIKEN, Chuo-ku, Tokyo 103-0027, Japan
| | - Shigeki Mori
- Advanced Research Support Center, Ehime University, Matsuyama, Ehime 790-8577, Japan
| | - Hisako Sato
- Graduate School of Science and Engineering, Ehime University, Matsuyama, Ehime 790-8577, Japan
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Malinowska M, Jarzyński S, Pieczonka A, Rachwalski M, Leśniak S, Zawisza A. Optically Pure Aziridin-2-yl Methanols as Readily Available 1H NMR Sensors for Enantiodiscrimination of α-Racemic Carboxylic Acids Containing Tertiary or Quaternary Stereogenic Centers. J Org Chem 2020; 85:11794-11801. [PMID: 32805106 PMCID: PMC7506949 DOI: 10.1021/acs.joc.0c01564] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
![]()
Enantiopure
aziridin-2-yl methanols 3–7 are used
as highly effective sensors for enantiodiscrimination
of α-racemic carboxylic acids containing tertiary or quaternary
stereogenic centers. A linear correlation between theoretical and
observed % ee values for CSA-3 and enantiomerically enriched
samples of mandelic acid has been observed, indicating the possible
application of these compounds in the ee determination. The free NH
and OH groups in 3–7 ensure good
recognition.
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Affiliation(s)
- Martyna Malinowska
- Department of Organic and Applied Chemistry, University of Łódź, Tamka 12, 91-403 Łódź, Poland
| | - Szymon Jarzyński
- Department of Organic and Applied Chemistry, University of Łódź, Tamka 12, 91-403 Łódź, Poland
| | - Adam Pieczonka
- Department of Organic and Applied Chemistry, University of Łódź, Tamka 12, 91-403 Łódź, Poland
| | - Michał Rachwalski
- Department of Organic and Applied Chemistry, University of Łódź, Tamka 12, 91-403 Łódź, Poland
| | - Stanisław Leśniak
- Department of Organic and Applied Chemistry, University of Łódź, Tamka 12, 91-403 Łódź, Poland
| | - Anna Zawisza
- Department of Organic and Applied Chemistry, University of Łódź, Tamka 12, 91-403 Łódź, Poland
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8
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Sato H. A new horizon for vibrational circular dichroism spectroscopy: a challenge for supramolecular chirality. Phys Chem Chem Phys 2020; 22:7671-7679. [DOI: 10.1039/d0cp00713g] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
The development of the solid state and time-step VCD methods opened a new horizon to reveal the mechanism of chirality amplification from microscopic to supramolecular scales.
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Affiliation(s)
- Hisako Sato
- Department of Chemistry
- Graduate School of Science and Engineering
- Ehime University
- Matsuyama 790-8577
- Japan
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9
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Chahal MK, Payne DT, Matsushita Y, Labuta J, Ariga K, Hill JP. Molecular Engineering of β‐Substituted Oxoporphyrinogens for Hydrogen‐Bond Donor Catalysis. European J Org Chem 2019. [DOI: 10.1002/ejoc.201901706] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Mandeep K. Chahal
- International Center for Materials Nanoarchitectonics (MANA) National Institute for Materials Science (NIMS) Namiki 1‐1, Tsukuba 305‐0044 Ibaraki Japan
| | - Daniel T. Payne
- International Center for Materials Nanoarchitectonics (MANA) National Institute for Materials Science (NIMS) Namiki 1‐1, Tsukuba 305‐0044 Ibaraki Japan
| | - Yoshitaka Matsushita
- Research Network and Facility Services Division National Institute for Materials Science (NIMS) 1‐2–1 Sengen, Tsukuba 305‐0047 Ibaraki Japan
| | - Jan Labuta
- International Center for Materials Nanoarchitectonics (MANA) National Institute for Materials Science (NIMS) Namiki 1‐1, Tsukuba 305‐0044 Ibaraki Japan
| | - Katsuhiko Ariga
- International Center for Materials Nanoarchitectonics (MANA) National Institute for Materials Science (NIMS) Namiki 1‐1, Tsukuba 305‐0044 Ibaraki Japan
- Department of Advanced Materials Science Graduate School of Frontier Sciences The University of Tokyo 5‐1–5 Kashiwanoha, Kashiwa 277‐8561 Chiba Japan
| | - Jonathan P. Hill
- International Center for Materials Nanoarchitectonics (MANA) National Institute for Materials Science (NIMS) Namiki 1‐1, Tsukuba 305‐0044 Ibaraki Japan
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10
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Feng L, Gao G, Zhao H, Zheng L, Wang Y, Stavropoulos P, Ai L, Zhang J. Synthesis of Tripeptide Derivatives with Three Stereogenic Centers and Chiral Recognition Probed by Tetraaza Macrocyclic Chiral Solvating Agents Derived from d-Phenylalanine and (1 S,2 S)-(+)-1,2-Diaminocyclohexane via 1H NMR Spectroscopy. J Org Chem 2018; 83:13874-13887. [PMID: 30346768 PMCID: PMC6499380 DOI: 10.1021/acs.joc.8b02212] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Enantiomers of a series of tripeptide derivatives with three stereogenic centers (±)-G1-G9 have been prepared from d- and l-α-amino acids as guests for chiral recognition by 1H NMR spectroscopy. In the meantime, a family of tetraaza macrocyclic chiral solvating agents (TAMCSAs) 1a-1d has been synthesized from d-phenylalanine and (1 S,2 S)-(+)-1,2-diaminocyclohexane. Discrimination of enantiomers of (±)-G1-G9 was carried out in the presence of TAMCSAs 1a-1d by 1H NMR spectroscopy. The results indicate that enantiomers of (±)-G1-G9 can be effectively discriminated in the presence of TAMCSAs 1a-1d by 1H NMR signals of multiple protons exhibiting nonequivalent chemical shifts (ΔΔδ) up to 0.616 ppm. Furthermore, enantiomers of (±)-G1-G9 were easily assigned by comparing 1H NMR signals of the split corresponding protons with those attributed to a single enantiomer. Different optical purities (ee up to 90%) of G1 were clearly observed and calculated in the presence of TAMCSAs 1a-1d, respectively. Intermolecular hydrogen bonding interactions were demonstrated through theoretical calculations of enantiomers of (±)-G1 with TAMCSA 1a by means of the hybrid functional theory with the standard basis sets of 3-21G of the Gaussian 03 program.
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Affiliation(s)
- Lei Feng
- College of Chemistry, Beijing Normal University, Beijing 100875, People’s Republic of China
| | - Guangpeng Gao
- College of Chemistry, Beijing Normal University, Beijing 100875, People’s Republic of China
| | - Hongmei Zhao
- Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, People’s Republic of China
| | - Li Zheng
- College of Chemistry, Beijing Normal University, Beijing 100875, People’s Republic of China
| | - Yu Wang
- College of Chemistry, Beijing Normal University, Beijing 100875, People’s Republic of China
| | - Pericles Stavropoulos
- Department of Chemistry, Missouri University of Science and Technology, Rolla, Missouri 65409, United States
| | - Lin Ai
- College of Chemistry, Beijing Normal University, Beijing 100875, People’s Republic of China
| | - Jiaxin Zhang
- College of Chemistry, Beijing Normal University, Beijing 100875, People’s Republic of China
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