1
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Zhou Z, Shu T, Su L, Zhang X. Size-matching compositing nanoprobe of AIE-type gold nanocluster supramolecular nanogels wrapped by hypergravity-tailored MnO 2 nanosheets for cellular glutathione detection. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2024; 308:123690. [PMID: 38043289 DOI: 10.1016/j.saa.2023.123690] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/08/2023] [Revised: 11/08/2023] [Accepted: 11/26/2023] [Indexed: 12/05/2023]
Abstract
Compositing has been the main approach for material creation via wisely combining material components with different properties. MnO2 nanosheets (MNSs) with thin 2 D morphology are usually applied to composite molecules or nanomaterials for biosensing and bioimaging applications. However, such composition is actually structurally unmatched, albeit performance matching. Here, a series of benefits merely on the basis of structural match have been unearthed via tailoring MNSs with four sizes by synthesis under controllable hypergravity field. The classical fluorophore-quencher couple was utilized as the subject model, where the soft supramolecular nanogels based on aggregation-induced emission (AIE)-active gold nanoclusters were wrapped by MNSs of strong absorption. By comparative study of one-on-one wrapping and one-to-many encapsulation with geometrical selection of different MNSs, we found that the one-on-one wrapping model protected weakly-bonded nanogels from combination-induced distortion and strengthened nanogel networks via endowing exoskeleton. Besides, wrapping pattern and size-match significantly enhanced the quenching efficiency of MNSs towards the emissive nanogels. More importantly, the well-wrapped nanocomposites had considerable enhanced biological compatibility with much lower cytotoxicity and higher transfection capacity than the untailored MNSs composite and could serve as cellular glutathione detection.
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Affiliation(s)
- Ziping Zhou
- Shenzhen Key Laboratory for Nano-Biosensing Technology, Research Center for Biosensor and Nanotheranostic, School of Biomedical Engineering, Shenzhen University Medical School, Shenzhen University, Shenzhen, Guangdong 518060, PR China; Beijing Key Laboratory for Bioengineering and Sensing Technology, School of Chemistry and Biological Engineering, University of Science and Technology Beijing, Beijing 100083, PR China; Aerospace Research Institute of Materials & Processing Technology, Science and Technology on Advanced Functional Composites Laboratory, Beijing 100076, PR China
| | - Tong Shu
- Shenzhen Key Laboratory for Nano-Biosensing Technology, Research Center for Biosensor and Nanotheranostic, School of Biomedical Engineering, Shenzhen University Medical School, Shenzhen University, Shenzhen, Guangdong 518060, PR China.
| | - Lei Su
- Shenzhen Key Laboratory for Nano-Biosensing Technology, Research Center for Biosensor and Nanotheranostic, School of Biomedical Engineering, Shenzhen University Medical School, Shenzhen University, Shenzhen, Guangdong 518060, PR China
| | - Xueji Zhang
- Shenzhen Key Laboratory for Nano-Biosensing Technology, Research Center for Biosensor and Nanotheranostic, School of Biomedical Engineering, Shenzhen University Medical School, Shenzhen University, Shenzhen, Guangdong 518060, PR China.
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2
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Yang MY, O’Mari O, Goddard WA, Vullev VI. How Permanent Are the Permanent Macrodipoles of Anthranilamide Bioinspired Molecular Electrets? J Am Chem Soc 2024; 146:5162-5172. [PMID: 38226894 PMCID: PMC10916682 DOI: 10.1021/jacs.3c10525] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2023] [Revised: 12/12/2023] [Accepted: 12/15/2023] [Indexed: 01/17/2024]
Abstract
Dipoles are ubiquitous, and their impacts on materials and interfaces affect many aspects of daily life. Despite their importance, dipoles remain underutilized, often because of insufficient knowledge about the structures producing them. As electrostatic analogues of magnets, electrets possess ordered electric dipoles. Here, we characterize the structural dynamics of bioinspired electret oligomers based on anthranilamide motifs. We report dynamics simulations, employing a force field that allows dynamic polarization, in a variety of solvents. The results show a linear increase in macrodipoles with oligomer length that strongly depends on solvent polarity and hydrogen-bonding (HB) propensity, as well as on the anthranilamide side chains. An increase in solvent polarity increases the dipole moments of the electret structures while decreasing the dipole effects on the moieties outside the solvation cavities. The former is due to enhancement of the Onsager reaction field and the latter to screening of the dipole-generated fields. Solvent dynamics hugely contributes to the fluctuations and magnitude of the electret dipoles. HB with the solvent weakens electret macrodipoles without breaking the intramolecular HB that maintains their extended conformation. This study provides design principles for developing a new class of organic materials with controllable electronic properties. An animated version of the TOC graphic showing a sequence of the MD trajectories of short and long molecular electrets in three solvents with different polarities is available in the HTML version of this paper.
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Affiliation(s)
- Moon Young Yang
- Materials
and Process Simulation Center, California
Institute of Technology, Pasadena, California 91125, United States
| | - Omar O’Mari
- Department
of Bioengineering, University of California, Riverside, California 92521, United States
| | - William A. Goddard
- Materials
and Process Simulation Center, California
Institute of Technology, Pasadena, California 91125, United States
| | - Valentine I. Vullev
- Department
of Bioengineering, University of California, Riverside, California 92521, United States
- Department
of Chemistry, University of California, Riverside, California 92521, United States
- Department
of Biochemistry, University of California, Riverside, California 92521, United States
- Materials
Science and Engineering Program, University
of California, Riverside, California 92521, United States
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3
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Feng W, Liu XJ, Xue MJ, Song QH. Bifunctional Fluorescent Probes for the Detection of Mustard Gas and Phosgene. Anal Chem 2023; 95:1755-1763. [PMID: 36596643 DOI: 10.1021/acs.analchem.2c05178] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Mustard gas [sulfur mustard (SM)] and phosgene are the most frequently used chemical warfare agents (CWAs), which pose a serious threat to human health and national security, and their rapid and accurate detection is essential to respond to terrorist attacks and industrial accidents. Herein, we developed a fluorescent probe with o-hydroxythioketone as two sensing sites, AQso, which can detect and distinguish mustard gas and phosgene. The dual-sensing-site probe AQso reacts with mustard gas to form a cyclic product with high sensitivity [limit of detection (LOD) = 70 nM] and is highly selective to SM over phosgene, SM analogues, active alkylhalides, acylhalides, and nerve agent mimics, in ethanol solutions. When encountering phosgene, AQso rapidly converts to cyclic carbonate, which is sensitive (LOD = 14 nM) and highly selective. Their sensing mechanisms of AQso to mustard gas and phosgene were well demonstrated by separation and characterization of the sensing products. Furthermore, a facile test strip with the probe was prepared to distinguish 2-chloroethyl ethyl sulfide (CEES) and phosgene in the gas phase by different fluorescence colors and response rates. Not using the complicated instrument, the qualitative and quantitative detection of CEES or phosgene can be achieved only by measuring the red-green-blue (RGB) channel intensity of the test strip after being exposed to CEES or phosgene gas by the smartphone with an RGB color application.
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Affiliation(s)
- Wei Feng
- Department of Chemistry, University of Science and Technology of China, Hefei 230026, P. R. China
| | - Xiao-Jun Liu
- Department of Chemistry, University of Science and Technology of China, Hefei 230026, P. R. China
| | - Min-Jie Xue
- Department of Chemistry, University of Science and Technology of China, Hefei 230026, P. R. China
| | - Qin-Hua Song
- Department of Chemistry, University of Science and Technology of China, Hefei 230026, P. R. China
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4
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Espinoza EM, Clark JA, Billones MK, Silva GTDM, da Silva CP, Quina FH, Vullev VI. Photophysics and Electrochemistry of Biomimetic Pyranoflavyliums: What Can Bioinspiration from Red Wines Offer? PHOTOCHEM 2022; 2:9-31. [PMID: 35075451 PMCID: PMC8783599 DOI: 10.3390/photochem2010003] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
Natural dyes and pigments offer incomparable diversity of structures and functionalities, making them an excellent source of inspiration for the design and development of synthetic chromophores with a myriad of emerging properties. Formed during maturation of red wines, pyranoanthocyanins are electron-deficient cationic pyranoflavylium dyes with broad absorption in the visible spectral region and pronounced chemical and photostability. Herein, we survey the optical and electrochemical properties of synthetic pyranoflavylium dyes functionalized with different electron-donating and electron-withdrawing groups, which vary their reduction potentials over a range of about 400 mV. Despite their highly electron-deficient cores, the exploration of pyranoflavyliums as photosensitizers has been limited to the "classical" n-type dye-sensitized solar cells (DSSCs) where they act as electron donors. In light of their electrochemical and spectroscopic properties, however, these biomimetic synthetic dyes should prove to be immensely beneficial as chromophores in p-type DSSCs, where their ability to act as photooxidants, along with their pronounced photostability, can benefit key advances in solar-energy science and engineering.
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Affiliation(s)
| | - John Anthony Clark
- Department of Bioengineering, University of California, Riverside, CA 92521, USA
| | | | | | - Cassio Pacheco da Silva
- Instituto de Química, Universidade de São Paulo, Avenida Lineu Prestes 748, Cidade Universitaŕia, São Paulo 05508-900, Brazil
| | - Frank Herbert Quina
- Instituto de Química, Universidade de São Paulo, Avenida Lineu Prestes 748, Cidade Universitaŕia, São Paulo 05508-900, Brazil
| | - Valentine Ivanov Vullev
- Department of Chemistry, University of California, Riverside, CA 92521, USA
- Department of Bioengineering, University of California, Riverside, CA 92521, USA
- Department of Biochemistry, University of California, Riverside, CA 92521, USA
- Materials Science and Engineering Program, University of California, Riverside, CA 92521, USA
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5
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O'Mari O, Vullev VI. Electrochemical analysis in charge-transfer science: The devil in the details. CURRENT OPINION IN ELECTROCHEMISTRY 2022; 31:100862. [PMID: 35059527 PMCID: PMC8765593 DOI: 10.1016/j.coelec.2021.100862] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
It is easy to carry out electrochemical analysis. It is demanding, however, to do it right, as inherent challenges, emerging from details in the data collection and the result interpretation, frequently present themselves. In pertinence to electron-donor-acceptor interactions, herein, we focus on voltammetrically obtained electrochemical potentials and their immense utility for extracting important characteristics of molecular analytes. Recommendations how to address key pending challenges, based on recent developments in electroanalysis and charge-transfer science, accompany the discussions on undesired impacts from irreversibility of oxidation and reduction, supporting electrolytes, choices of reference, liquid junctions, and 'nonideality' of molecular shapes. As the wide implications of charge transfer are indisputable, using the tools at our disposal for improving the reliability of electroanalysis is crucial for advancing modern science and engineering.
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Affiliation(s)
- Omar O'Mari
- Department of Bioengineering, University of California, Riverside, CA 92521, USA
| | - Valentine I Vullev
- Department of Bioengineering, University of California, Riverside, CA 92521, USA
- Department of Chemistry, University of California, Riverside, CA 92521, USA
- Department of Biochemistry, University of California, Riverside, CA 92521, USA
- Materials Science and Engineering Program, University of California, Riverside, CA 92521, USA
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6
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Espinoza EM, Clark JA, Silva CP, Derr JB, Silva GTDM, Billones MK, Morales M, Quina FH, Vullev VI. Charge transfer vs. proton transfer in the excited-state dynamics of biomimetic pyranoflavylium cations. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY 2022. [DOI: 10.1016/j.jpap.2022.100110] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022] Open
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7
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Rybicka-Jasińska K, Derr JB, Vullev VI. What defines biomimetic and bioinspired science and engineering? PURE APPL CHEM 2021. [DOI: 10.1515/pac-2021-0323] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Abstract
Biomimicry, biomimesis and bioinspiration define distinctly different approaches for deepening the understanding of how living systems work and employing this knowledge to meet pressing demands in engineering. Biomimicry involves shear imitation of biological structures that most often do not reproduce the functionality that they have while in the living organisms. Biomimesis aims at reproduction of biological structure-function relationships and advances our knowledge of how different components of complex living systems work. Bioinspiration employs this knowledge in abiotic manners that are optimal for targeted applications. This article introduces and reviews these concepts in a global historic perspective. Representative examples from charge-transfer science and solar-energy engineering illustrate the evolution from biomimetic to bioinspired approaches and show their importance. Bioinspired molecular electrets, aiming at exploration of dipole effects on charge transfer, demonstrate the pintail impacts of biological inspiration that reach beyond its high utilitarian values. The abiotic character of bioinspiration opens doors for the emergence of unprecedented properties and phenomena, beyond what nature can offer.
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Affiliation(s)
| | - James B. Derr
- Department of Biochemistry , University of California , Riverside , CA , 92521 , USA
| | - Valentine I. Vullev
- Department of Biochemistry , University of California , Riverside , CA , 92521 , USA
- Department of Bioengineering , University of California , Riverside , CA , 92521 , USA
- Department of Chemistry , University of California , Riverside , CA , 92521 , USA
- Materials Science and Engineering Program , University of California , Riverside , CA , 92521 , USA
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8
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Derr JB, Rybicka-Jasińska K, Espinoza EM, Morales M, Billones MK, Clark JA, Vullev VI. On the Search of a Silver Bullet for the Preparation of Bioinspired Molecular Electrets with Propensity to Transfer Holes at High Potentials. Biomolecules 2021; 11:429. [PMID: 33804209 PMCID: PMC8001849 DOI: 10.3390/biom11030429] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2021] [Revised: 03/01/2021] [Accepted: 03/07/2021] [Indexed: 01/24/2023] Open
Abstract
Biological structure-function relationships offer incomparable paradigms for charge-transfer (CT) science and its implementation in solar-energy engineering, organic electronics, and photonics. Electrets are systems with co-directionally oriented electric dopes with immense importance for CT science, and bioinspired molecular electrets are polyamides of anthranilic-acid derivatives with designs originating from natural biomolecular motifs. This publication focuses on the synthesis of molecular electrets with ether substituents. As important as ether electret residues are for transferring holes under relatively high potentials, the synthesis of their precursors presents formidable challenges. Each residue in the molecular electrets is introduced as its 2-nitrobenzoic acid (NBA) derivative. Hence, robust and scalable synthesis of ether derivatives of NBA is essential for making such hole-transfer molecular electrets. Purdie-Irvine alkylation, using silver oxide, produces with 90% yield the esters of the NBA building block for iso-butyl ether electrets. It warrants additional ester hydrolysis for obtaining the desired NBA precursor. Conversely, Williamson etherification selectively produces the same free-acid ether derivative in one-pot reaction, but a 40% yield. The high yields of Purdie-Irvine alkylation and the selectivity of the Williamson etherification provide important guidelines for synthesizing building blocks for bioinspired molecular electrets and a wide range of other complex ether conjugates.
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Affiliation(s)
- James Bennett Derr
- Department of Biochemistry, University of California, Riverside, CA 92521, USA;
| | | | - Eli Misael Espinoza
- Department of Chemistry, University of California, Riverside, CA 92521, USA; (E.M.E.); (M.M.)
| | - Maryann Morales
- Department of Chemistry, University of California, Riverside, CA 92521, USA; (E.M.E.); (M.M.)
| | | | - John Anthony Clark
- Department of Bioengineering, University of California, Riverside, CA 92521, USA; (K.R.-J.); (J.A.C.)
| | - Valentine Ivanov Vullev
- Department of Biochemistry, University of California, Riverside, CA 92521, USA;
- Department of Bioengineering, University of California, Riverside, CA 92521, USA; (K.R.-J.); (J.A.C.)
- Department of Chemistry, University of California, Riverside, CA 92521, USA; (E.M.E.); (M.M.)
- Department of Materials Science and Engineering Program, University of California, Riverside, CA 92521, USA
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9
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Derr JB, Tamayo J, Clark JA, Morales M, Mayther MF, Espinoza EM, Rybicka-Jasińska K, Vullev VI. Multifaceted aspects of charge transfer. Phys Chem Chem Phys 2020; 22:21583-21629. [PMID: 32785306 PMCID: PMC7544685 DOI: 10.1039/d0cp01556c] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Charge transfer and charge transport are by far among the most important processes for sustaining life on Earth and for making our modern ways of living possible. Involving multiple electron-transfer steps, photosynthesis and cellular respiration have been principally responsible for managing the energy flow in the biosphere of our planet since the Great Oxygen Event. It is impossible to imagine living organisms without charge transport mediated by ion channels, or electron and proton transfer mediated by redox enzymes. Concurrently, transfer and transport of electrons and holes drive the functionalities of electronic and photonic devices that are intricate for our lives. While fueling advances in engineering, charge-transfer science has established itself as an important independent field, originating from physical chemistry and chemical physics, focusing on paradigms from biology, and gaining momentum from solar-energy research. Here, we review the fundamental concepts of charge transfer, and outline its core role in a broad range of unrelated fields, such as medicine, environmental science, catalysis, electronics and photonics. The ubiquitous nature of dipoles, for example, sets demands on deepening the understanding of how localized electric fields affect charge transfer. Charge-transfer electrets, thus, prove important for advancing the field and for interfacing fundamental science with engineering. Synergy between the vastly different aspects of charge-transfer science sets the stage for the broad global impacts that the advances in this field have.
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Affiliation(s)
- James B Derr
- Department of Biochemistry, University of California, Riverside, CA 92521, USA.
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10
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Molecular electrets – Why do dipoles matter for charge transfer and excited-state dynamics? J Photochem Photobiol A Chem 2020. [DOI: 10.1016/j.jphotochem.2020.112779] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
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11
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Goliszewska K, Rybicka-Jasińska K, Clark JA, Vullev VI, Gryko D. Photoredox Catalysis: The Reaction Mechanism Can Adjust to Electronic Properties of a Catalyst. ACS Catal 2020. [DOI: 10.1021/acscatal.0c00200] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Katarzyna Goliszewska
- Institute of Organic Chemistry Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
| | | | - John A. Clark
- Department of Bioengineering, University of California at Riverside, Riverside, California 92521, United States
| | - Valentine I. Vullev
- Department of Bioengineering, University of California at Riverside, Riverside, California 92521, United States
- Department of Chemistry, Department of Biochemistry, and Materials Science and Engineering Program, University of California at Riverside, Riverside, California 92521, United States
| | - Dorota Gryko
- Institute of Organic Chemistry Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland
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12
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Skonieczny K, Espinoza EM, Derr JB, Morales M, Clinton JM, Xia B, Vullev VI. Biomimetic and bioinspired molecular electrets. How to make them and why does the established peptide chemistry not always work? PURE APPL CHEM 2020. [DOI: 10.1515/pac-2019-0111] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract“Biomimetic” and “bioinspired” define different aspects of the impacts that biology exerts on science and engineering. Biomimicking improves the understanding of how living systems work, and builds tools for bioinspired endeavors. Biological inspiration takes ideas from biology and implements them in unorthodox manners, exceeding what nature offers. Molecular electrets, i.e. systems with ordered electric dipoles, are key for advancing charge-transfer (CT) science and engineering. Protein helices and their biomimetic analogues, based on synthetic polypeptides, are the best-known molecular electrets. The inability of native polypeptide backbones to efficiently mediate long-range CT, however, limits their utility. Bioinspired molecular electrets based on anthranilamides can overcome the limitations of their biological and biomimetic counterparts. Polypeptide helices are easy to synthesize using established automated protocols. These protocols, however, fail to produce even short anthranilamide oligomers. For making anthranilamides, the residues are introduced as their nitrobenzoic-acid derivatives, and the oligomers are built from their C- to their N-termini via amide-coupling and nitro-reduction steps. The stringent requirements for these reduction and coupling steps pose non-trivial challenges, such as high selectivity, quantitative yields, and fast completion under mild conditions. Addressing these challenges will provide access to bioinspired molecular electrets essential for organic electronics and energy conversion.
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Affiliation(s)
- Kamil Skonieczny
- Department of Bioengineering, University of California, Riverside, CA 92521, USA
- Institute of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44-52, 01-224 Warsaw, Poland
| | - Eli M. Espinoza
- Department of Chemistry, University of California, Riverside, CA 92521, USA
| | - James B. Derr
- Department of Biochemistry, University of California, Riverside, CA 92521, USA
| | - Maryann Morales
- Department of Chemistry, University of California, Riverside, CA 92521, USA
| | - Jillian M. Clinton
- Department of Bioengineering, University of California, Riverside, CA 92521, USA
| | - Bing Xia
- GlaxoSmithKline, 200 Cambridgepark Dr., Cambridge, MA 02140, USA
| | - Valentine I. Vullev
- Department of Bioengineering, University of California, Riverside, CA 92521, USA
- Department of Chemistry, University of California, Riverside, CA 92521, USA
- Department of Biochemistry, University of California, Riverside, CA 92521, USA
- Materials Science and Engineering Program, University of California, Riverside, CA 92521, USA
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Derr JB, Clark JA, Morales M, Espinoza EM, Vadhin S, Vullev VI. Solvent-induced selectivity of Williamson etherification in the pursuit of amides resistant against oxidative degradation. RSC Adv 2020; 10:24419-24424. [PMID: 35516219 PMCID: PMC9055110 DOI: 10.1039/d0ra04465b] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2020] [Accepted: 05/26/2020] [Indexed: 12/28/2022] Open
Abstract
This article reports two discoveries. (1) 2-Methoxyethanol induces unprecedented selectivity for etherification of 5-hydroxy-2-nitrobenzic acids without forming undesired esters. (2) Such compounds are precursors for amides showing unusual robustness against oxidative degradation, essential for molecular electrets that transfer strongly oxidizing holes at about −6.4 eV vs. vacuum. Selective etherification produces precursors for amides resistant to oxidative degradation, i.e., showing reversible oxidation at 1.5 to 1.7 V vs. SCE.![]()
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Affiliation(s)
- James B. Derr
- Department of Biochemistry
- University of California
- Riverside
- USA
| | - John A. Clark
- Department of Bioengineering
- University of California
- Riverside
- USA
| | | | | | - Sandra Vadhin
- Department of Bioengineering
- University of California
- Riverside
- USA
| | - Valentine I. Vullev
- Department of Biochemistry
- University of California
- Riverside
- USA
- Department of Bioengineering
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14
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Espinoza EM, Bao D, Krzeszewski M, Gryko DT, Vullev VI. Is it common for charge recombination to be faster than charge separation? INT J CHEM KINET 2019. [DOI: 10.1002/kin.21285] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Affiliation(s)
- Eli M. Espinoza
- Department of Chemistry University of California Riverside California
| | - Duoduo Bao
- Department of Bioengineering University of California Riverside California
| | - Maciej Krzeszewski
- Department of Bioengineering University of California Riverside California
- Instytut Chemii Organicznej Polskiej Akademii Nauk Warsaw Poland
| | - Daniel T. Gryko
- Instytut Chemii Organicznej Polskiej Akademii Nauk Warsaw Poland
| | - Valentine I. Vullev
- Department of Chemistry University of California Riverside California
- Department of Bioengineering University of California Riverside California
- Department of Biochemistry University of California Riverside California
- Materials Science and Engineering Program University of California Riverside California
- Instituto de Química Universidade de São Paulo Cidade Universitária São Paulo Brazil
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15
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Song X, Zhang F, Bu Y. Dynamic relaying properties of a β-turn peptide in long-range electron transfer. J Comput Chem 2019; 40:988-996. [PMID: 30451309 DOI: 10.1002/jcc.25541] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2018] [Revised: 06/30/2018] [Accepted: 07/03/2018] [Indexed: 11/05/2022]
Abstract
The relay stations play a significant role in long-range charge hopping transfer in proteins. Although studies have clarified that many more protein structural motifs can function as relays in charge hopping transfers by acting as intermediate charge carriers, the relaying properties are still poorly understood. In this work, taking a β-turn oligopeptide as an example, we report a dynamic character of a relay with tunable relaying properties using the density functional theory calculations. Our main finding is that a β-turn peptide can serve as an effective electron relay in facilitating long-range electron migration and its relay properties is vibration-tunable. The vibration-induced structural transient distortions remarkably affect the lowest occupied molecular orbital (LUMO) energy, vertical electron affinity and electron-binding mode of the β-turn oligopeptide and the singly occupied molecular orbital (SOMO) energy of the corresponding electron adduct and thus the relaying properties. Different vibration modes lead to different structural distortions and thus have different effects on the relaying properties and ability of the β-turn peptide. For the relaying properties, there approximately is a linear negative correlation of electron affinity with the LUMO energy of the β-turn or the SOMO energy of its electron adduct. Besides, such relaying properties also vary in the vibration evolution process, and the electron-binding modes may be tunable. As an important addition to the known static charge relaying properties occurring in various protein structural motifs, this work reports the dynamic electron-relaying characteristics of a β-turn oligopeptide with variable relaying properties governed by molecular vibrations which can be applied to different proteins in mediating long-range charge transfers. Clearly, this work reveals molecular vibration effects on the electron relaying properties of protein structural motifs and provides new insights into the dynamics of long-range charge transfers in proteins. © 2018 Wiley Periodicals, Inc.
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Affiliation(s)
- Xiufang Song
- School of Chemistry &Chemical Engineering, Institute of Theoretical Chemistry, Shandong University, Jinan 250100, People's Republic of China
| | - Fengying Zhang
- School of Chemistry &Chemical Engineering, Institute of Theoretical Chemistry, Shandong University, Jinan 250100, People's Republic of China
| | - Yuxiang Bu
- School of Chemistry &Chemical Engineering, Institute of Theoretical Chemistry, Shandong University, Jinan 250100, People's Republic of China
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Espinoza EM, Clark JA, Derr JB, Bao D, Georgieva B, Quina FH, Vullev VI. How Do Amides Affect the Electronic Properties of Pyrene? ACS OMEGA 2018; 3:12857-12867. [PMID: 31458010 PMCID: PMC6644773 DOI: 10.1021/acsomega.8b01581] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/09/2018] [Accepted: 09/24/2018] [Indexed: 05/12/2023]
Abstract
The electronic properties of amide linkers, which are intricate components of biomolecules, offer a wealth of unexplored possibilities. Herein, we demonstrate how the different modes of attaching an amide to a pyrene chromophore affect the electrochemical and optical properties of the chromophore. Thus, although they cause minimal spectral shifts, amide substituents can improve either the electron-accepting or electron-donating capabilities of pyrene. Specifically, inversion of the amide orientation shifts the reduction potentials by 200 mV. These trends indicate that, although amides affect to a similar extent the energies of the ground and singlet excited states of pyrene, the effects on the doublet states of its radical ions are distinctly different. This behavior reflects the unusually strong orientation dependence of the resonance effects of amide substituents, which should extend to amide substituents on other types of chromophores in general. These results represent an example where the Hammett sigma constants fail to predict substituent effects on electrochemical properties. On the other hand, Swain-Lupton parameters are found to be in good agreement with the observed trends. Examination of the frontier orbitals of the pyrene derivatives and their components reveals the underlying reason for the observed amide effects on the electronic properties of this polycyclic aromatic hydrocarbon and points to key molecular-design strategies for electronic and energy-conversion systems.
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Affiliation(s)
- Eli M. Espinoza
- Department
of Chemistry, Department of Bioengineering, Department of Biochemistry, and Materials Science
and Engineering Program, University of California, Riverside, California 92521, United States
- Instituto
de Química, Universidade de São
Paulo, Avenida Lineu
Prestes 748, Cidade Universitária, São
Paulo 05508-000, Brazil
| | - John A. Clark
- Department
of Chemistry, Department of Bioengineering, Department of Biochemistry, and Materials Science
and Engineering Program, University of California, Riverside, California 92521, United States
| | - James B. Derr
- Department
of Chemistry, Department of Bioengineering, Department of Biochemistry, and Materials Science
and Engineering Program, University of California, Riverside, California 92521, United States
| | - Duoduo Bao
- Department
of Chemistry, Department of Bioengineering, Department of Biochemistry, and Materials Science
and Engineering Program, University of California, Riverside, California 92521, United States
| | - Boriana Georgieva
- Department
of Chemistry, Department of Bioengineering, Department of Biochemistry, and Materials Science
and Engineering Program, University of California, Riverside, California 92521, United States
| | - Frank H. Quina
- Instituto
de Química, Universidade de São
Paulo, Avenida Lineu
Prestes 748, Cidade Universitária, São
Paulo 05508-000, Brazil
- E-mail: (F.H.Q.)
| | - Valentine I. Vullev
- Department
of Chemistry, Department of Bioengineering, Department of Biochemistry, and Materials Science
and Engineering Program, University of California, Riverside, California 92521, United States
- E-mail: (V.I.V.)
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17
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Derr JB, Tamayo J, Espinoza EM, Clark JA, Vullev VI. Dipole-induced effects on charge transfer and charge transport. Why do molecular electrets matter? CAN J CHEM 2018. [DOI: 10.1139/cjc-2017-0389] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Charge transfer (CT) and charge transport (CTr) are at the core of life-sustaining biological processes and of processes that govern the performance of electronic and energy-conversion devices. Electric fields are invaluable for guiding charge movement. Therefore, as electrostatic analogues of magnets, electrets have unexplored potential for generating local electric fields for accelerating desired CT processes and suppressing undesired ones. The notion about dipole-generated local fields affecting CT has evolved since the middle of the 20th century. In the 1990s, the first reports demonstrating the dipole effects on the kinetics of long-range electron transfer appeared. Concurrently, the development of molecular-level designs of electric junctions has led the exploration of dipole effects on CTr. Biomimetic molecular electrets such as polypeptide helices are often the dipole sources in CT systems. Conversely, surface-charge electrets and self-assembled monolayers of small polar conjugates are the preferred sources for modifying interfacial electric fields for controlling CTr. The multifaceted complexity of such effects on CT and CTr testifies for the challenges and the wealth of this field that still remains largely unexplored. This review outlines the basic concepts about dipole effects on CT and CTr, discusses their evolution, and provides accounts for their future developments and impacts.
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Affiliation(s)
- James B. Derr
- Department of Biochemistry, University of California, Riverside, CA 92521, USA
| | - Jesse Tamayo
- Department of Chemistry, University of California, Riverside, CA 92521, USA
| | - Eli M. Espinoza
- Department of Chemistry, University of California, Riverside, CA 92521, USA
| | - John A. Clark
- Department of Bioengineering, University of California, Riverside, CA 92521, USA
| | - Valentine I. Vullev
- Department of Biochemistry, University of California, Riverside, CA 92521, USA
- Department of Chemistry, University of California, Riverside, CA 92521, USA
- Department of Bioengineering, University of California, Riverside, CA 92521, USA
- Materials Science and Engineering Program, University of California, Riverside, CA 92521, USA
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18
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Krzeszewski M, Espinoza EM, Červinka C, Derr JB, Clark JA, Borchardt D, Beran GJO, Gryko DT, Vullev VI. Dipole Effects on Electron Transfer are Enormous. Angew Chem Int Ed Engl 2018; 57:12365-12369. [PMID: 29740926 DOI: 10.1002/anie.201802637] [Citation(s) in RCA: 48] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2018] [Indexed: 11/11/2022]
Abstract
Molecular dipoles present important, but underutilized, methods for guiding electron transfer (ET) processes. While dipoles generate fields of Gigavolts per meter in their vicinity, reported differences between rates of ET along versus against dipoles are often small or undetectable. Herein we show unprecedentedly large dipole effects on ET. Depending on their orientation, dipoles either ensure picosecond ET, or turn ET completely off. Furthermore, favorable dipole orientation makes ET possible even in lipophilic medium, which appears counterintuitive for non-charged donor-acceptor systems. Our analysis reveals that dipoles can substantially alter the ET driving force for low solvent polarity, which accounts for these unique trends. This discovery opens doors for guiding forward ET processes while suppressing undesired backward electron transduction, which is one of the holy grails of photophysics and energy science.
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Affiliation(s)
- Maciej Krzeszewski
- Department of Bioengineering, University of California, Riverside, Riverside, CA, 92521, USA.,Institute of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44-52, 01-224, Warsaw, Poland.,Present address: Graduate School of Science, Nagoya University, Chikusa, Nagoya, 464-8602, Japan
| | - Eli M Espinoza
- Department of Chemistry, University of California, Riverside, Riverside, CA, 92521, USA
| | - Ctirad Červinka
- Department of Chemistry, University of California, Riverside, Riverside, CA, 92521, USA.,Department of Physical Chemistry, University of Chemistry and Technology, Technická 5, 166 28, Prague 6-Dejvice, Czech Republic
| | - James B Derr
- Department of Biochemistry, University of California, Riverside, Riverside, CA, 92521, USA
| | - John A Clark
- Department of Bioengineering, University of California, Riverside, Riverside, CA, 92521, USA
| | - Dan Borchardt
- Department of Chemistry, University of California, Riverside, Riverside, CA, 92521, USA
| | - Gregory J O Beran
- Department of Chemistry, University of California, Riverside, Riverside, CA, 92521, USA
| | - Daniel T Gryko
- Institute of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44-52, 01-224, Warsaw, Poland
| | - Valentine I Vullev
- Department of Bioengineering, University of California, Riverside, Riverside, CA, 92521, USA.,Department of Chemistry, University of California, Riverside, Riverside, CA, 92521, USA.,Department of Biochemistry, University of California, Riverside, Riverside, CA, 92521, USA
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19
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Krzeszewski M, Espinoza EM, Červinka C, Derr JB, Clark JA, Borchardt D, Beran GJO, Gryko DT, Vullev VI. Dipole Effects on Electron Transfer are Enormous. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201802637] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Maciej Krzeszewski
- Department of Bioengineering University of California, Riverside Riverside CA 92521 USA
- Institute of Organic Chemistry Polish Academy of Sciences Kasprzaka 44–52 01-224 Warsaw Poland
- Present address: Graduate School of Science Nagoya University Chikusa Nagoya 464-8602 Japan
| | - Eli M. Espinoza
- Department of Chemistry University of California, Riverside Riverside CA 92521 USA
| | - Ctirad Červinka
- Department of Chemistry University of California, Riverside Riverside CA 92521 USA
- Department of Physical Chemistry University of Chemistry and Technology Technická 5 166 28 Prague 6—Dejvice Czech Republic
| | - James B. Derr
- Department of Biochemistry University of California, Riverside Riverside CA 92521 USA
| | - John A. Clark
- Department of Bioengineering University of California, Riverside Riverside CA 92521 USA
| | - Dan Borchardt
- Department of Chemistry University of California, Riverside Riverside CA 92521 USA
| | - Gregory J. O. Beran
- Department of Chemistry University of California, Riverside Riverside CA 92521 USA
| | - Daniel T. Gryko
- Institute of Organic Chemistry Polish Academy of Sciences Kasprzaka 44–52 01-224 Warsaw Poland
| | - Valentine I. Vullev
- Department of Bioengineering University of California, Riverside Riverside CA 92521 USA
- Department of Chemistry University of California, Riverside Riverside CA 92521 USA
- Department of Biochemistry University of California, Riverside Riverside CA 92521 USA
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20
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Larsen-Clinton JM, Espinoza EM, F Mayther M, Clark J, Tao C, Bao D, Larino CM, Wurch M, Lara S, Vullev VI. Fluorinated aminoanthranilamides: non-native amino acids for bringing proteomic approaches to charge-transfer systems. Phys Chem Chem Phys 2018; 19:7871-7876. [PMID: 28262882 DOI: 10.1039/c7cp00432j] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
The ability to control charge transfer at molecular and nanometer scales represents the ultimate level of electronic mastery, and its impacts cannot be overstated. As electrostatic analogues of magnets, electrets possess ordered electric dipoles that present key paradigms for directing transduction of electrons and holes. Herein we describe the design and development of fluorinated aminoanthranilamides, derivatives of non-native aromatic beta-amino acids, as building blocks for hole-transfer molecular electrets. A highly regio-selective nucleophilic aromatic substitution of difluorinated nitrobenzoic acid provides the underpinnings for an array of unprecedented anthranilamide structures. Spin density distribution and electrochemical analyses reveal that fluorine induces about 200 mV positive shifts in reduction potentials without compromising the stability of the oxidized residues, making them invaluable building blocks for hole-transfer systems. These findings open unexplored routes to novel amino-acid structures, setting a foundation for bringing principles of proteomics to designs of charge-transfer systems.
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Affiliation(s)
| | - Eli M Espinoza
- Department of Chemistry, University of California, Riverside, CA 92521, USA
| | | | - John Clark
- Department of Bioengineering, University of California, Riverside, CA 92521, USA.
| | - Christina Tao
- Department of Bioengineering, University of California, Riverside, CA 92521, USA.
| | - Duoduo Bao
- Department of Bioengineering, University of California, Riverside, CA 92521, USA.
| | - Christa M Larino
- Department of Bioengineering, University of California, Riverside, CA 92521, USA.
| | - Michelle Wurch
- Department of Bioengineering, University of California, Riverside, CA 92521, USA. and Materials Science and Engineering Program, University of California, Riverside, CA 92521, USA
| | - Stephanie Lara
- Department of Bioengineering, University of California, Riverside, CA 92521, USA.
| | - Valentine I Vullev
- Department of Bioengineering, University of California, Riverside, CA 92521, USA. and Department of Chemistry, University of California, Riverside, CA 92521, USA and Materials Science and Engineering Program, University of California, Riverside, CA 92521, USA and Department of Biochemistry, University of California, Riverside, CA 92521, USA
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21
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Espinoza EM, Larsen-Clinton JM, Krzeszewski M, Darabedian N, Gryko DT, Vullev VI. Bioinspired approach toward molecular electrets: synthetic proteome for materials. PURE APPL CHEM 2017. [DOI: 10.1515/pac-2017-0309] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
AbstractMolecular-level control of charge transfer (CT) is essential for both, organic electronics and solar-energy conversion, as well as for a wide range of biological processes. This article provides an overview of the utility of local electric fields originating from molecular dipoles for directing CT processes. Systems with ordered dipoles, i.e. molecular electrets, are the centerpiece of the discussion. The conceptual evolution from biomimicry to biomimesis, and then to biological inspiration, paves the roads leading from testing the understanding of how natural living systems function to implementing these lessons into optimal paradigms for specific applications. This progression of the evolving structure-function relationships allows for the development of bioinspired electrets composed of non-native aromatic amino acids. A set of such non-native residues that are electron-rich can be viewed as a synthetic proteome for hole-transfer electrets. Detailed considerations of the electronic structure of an individual residue prove of key importance for designating the points for optimal injection of holes (i.e. extraction of electrons) in electret oligomers. This multifaceted bioinspired approach for the design of CT molecular systems provides unexplored paradigms for electronic and energy science and engineering.
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Affiliation(s)
- Eli M. Espinoza
- Department of Chemistry, University of California, Riverside, CA 92521, USA
| | | | - Maciej Krzeszewski
- Department of Bioengineering, University of California, Riverside, CA 92521, USA
- Institute of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44-52, 01-224 Warsaw, Poland
| | - Narek Darabedian
- Department of Bioengineering, University of California, Riverside, CA 92521, USA
| | - Daniel T. Gryko
- Institute of Organic Chemistry, Polish Academy of Sciences, Kasprzaka 44-52, 01-224 Warsaw, Poland
| | - Valentine I. Vullev
- Department of Chemistry, University of California, Riverside, CA 92521, USA
- Department of Bioengineering, University of California, Riverside, CA 92521, USA
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22
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Rybicka-Jasińska K, Shan W, Zawada K, Kadish KM, Gryko D. Porphyrins as Photoredox Catalysts: Experimental and Theoretical Studies. J Am Chem Soc 2016; 138:15451-15458. [PMID: 27933929 DOI: 10.1021/jacs.6b09036] [Citation(s) in RCA: 129] [Impact Index Per Article: 16.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Metalloporphyrins not only are vital in biological systems but also are valuable catalysts in organic synthesis. On the other hand, catalytic properties of free base porphyrins have been less explored. They are mostly known as efficient photosensitizers for the generation of singlet oxygen via photoinduced energy transfer processes, but under light irradiation, they can also participate in electron transfer processes. Indeed, we have found that free base tetraphenylporphyrin (H2TPP) is an efficient photoredox catalyst for the reaction of aldehydes with diazo compounds leading to α-alkylated derivatives. The performance of a porphyrin catalyst can be optimized by tailoring various substituents at the periphery of the macrocycle at both the β and meso positions. This allows for the fine tuning of their optical and electrochemical properties and hence their catalytic activity.
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Affiliation(s)
| | - Wenqian Shan
- University of Houston , Department of Chemistry, Houston, Texas 77204-5003, United States
| | - Katarzyna Zawada
- Medical University of Warsaw , Faculty of Pharmacy with the Laboratory Medicine Division, Department of Physical Chemistry, Banacha 1, 02-097 Warsaw, Poland
| | - Karl M Kadish
- University of Houston , Department of Chemistry, Houston, Texas 77204-5003, United States
| | - Dorota Gryko
- Institute of Organic Chemistry, Polish Academy of Sciences , Kasprzaka 44/52, 01-224 Warsaw, Poland
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23
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Purc A, Espinoza EM, Nazir R, Romero JJ, Skonieczny K, Jeżewski A, Larsen JM, Gryko DT, Vullev VI. Gating That Suppresses Charge Recombination-The Role of Mono-N-Arylated Diketopyrrolopyrrole. J Am Chem Soc 2016; 138:12826-12832. [PMID: 27617743 DOI: 10.1021/jacs.6b04974] [Citation(s) in RCA: 48] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
Suppressing the charge recombination (CR) that follows an efficient charge separation (CS) is of key importance for energy, electronics, and photonics applications. We focus on the role of dynamic gating for impeding CR in a molecular rotor, comprising an electron donor and acceptor directly linked via a single bond. The media viscosity has an unusual dual effect on the dynamics of CS and CR in this dyad. For solvents with intermediate viscosity, CR is 1.5-3 times slower than CS. Lowering the viscosity below ∼0.6 mPa s or increasing it above ∼10 mPa s makes CR 10-30 times slower than CS. Ring rotation around the donor-acceptor bond can account only for the trends observed for nonviscous solvents. Media viscosity, however, affects not only torsional but also vibrational modes. Suppressing predominantly slow vibrational modes by viscous solvents can impact the rates of CS and CR to a different extent. That is, an increase in the viscosity can plausibly suppress modes that are involved in the transition from the charge-transfer (CT) to the ground state, i.e., CR, but at the same time are not important for the transition from the locally excited to the CT state, i.e., CS. These results provide a unique example of synergy between torsional and vibronic modes and their drastic effects on charge-transfer dynamics, thus setting paradigms for controlling CS and CR.
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Affiliation(s)
- Anna Purc
- Institute of Organic Chemistry, Polish Academy of Sciences , Kasprzaka 44-52, 01-224 Warsaw, Poland
| | | | - Rashid Nazir
- Institute of Organic Chemistry, Polish Academy of Sciences , Kasprzaka 44-52, 01-224 Warsaw, Poland
| | | | - Kamil Skonieczny
- Institute of Organic Chemistry, Polish Academy of Sciences , Kasprzaka 44-52, 01-224 Warsaw, Poland
| | - Artur Jeżewski
- Institute of Organic Chemistry, Polish Academy of Sciences , Kasprzaka 44-52, 01-224 Warsaw, Poland
| | | | - Daniel T Gryko
- Institute of Organic Chemistry, Polish Academy of Sciences , Kasprzaka 44-52, 01-224 Warsaw, Poland
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