1
|
Ahsan A, Wang X, Sk R, Heydari M, Buimaga-Iarinca L, Wäckerlin C, Lucenti E, Decurtins S, Cariati E, Jung TA, Aschauer U, Liu SX. Self-Assembly of N-Rich Triimidazoles on Ag(111): Mixing the Pleasures and Pains of Epitaxy and Strain. THE JOURNAL OF PHYSICAL CHEMISTRY. C, NANOMATERIALS AND INTERFACES 2023; 127:23000-23009. [PMID: 38053624 PMCID: PMC10694807 DOI: 10.1021/acs.jpcc.3c03325] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/18/2023] [Revised: 09/22/2023] [Indexed: 12/07/2023]
Abstract
In the present report, homochiral hydrogen-bonded assemblies of heavily N-doped (C9H6N6) heterocyclic triimidazole (TT) molecules on an Ag(111) substrate were investigated using scanning tunneling microscopy (STM) and low energy electron diffraction (LEED) techniques. The planar and prochiral TT molecules, which exhibit a threefold rotation symmetry and lack mirror symmetry when assembled on the substrate, carry multiple hydrogen-bonding donor and acceptor functionalities, inevitably leading to the formation of hexameric two-dimensionally extended assemblies that can be either homo- (RR/SS) or heterochiral (RS). Experimental STM data showing well-ordered homochiral domains and experimental LEED data are consistent with simulations assuming the R19.1° overlayer on the Ag(111) lattice. Importantly, we report the unexpected coincidence of spontaneous resolution with the condensation of neighboring islands in adjacent "Janus pairs". The islands are connected by a characteristic fault zone, an observation that we discuss in the context of the fairly symmetric molecule and its propensity to compromise and benefit from interisland bonding at the expense of lattice mismatches and strain in the defect zone. We relate this to the close to triangular shape and the substantial but weak bonding scheme beyond van der Waals (vdW) of the TT molecules, which is due to the three N-containing five-membered imidazole rings. Density functional theory (DFT) calculations show clear energetic differences between homochiral and heterochiral pairwise interactions, clearly supporting the experimental results.
Collapse
Affiliation(s)
- Aisha Ahsan
- Laboratory
for X-ray Nanoscience and Technologies, Paul Scherrer Institute, Villigen-PSI 5232, Switzerland
- Department
of Physics, University of Basel, Klingelbergstrasse 82, Basel 4056, Switzerland
| | - Xing Wang
- Department
of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Freiestrasse 3, Bern 3012, Switzerland
| | - Rejaul Sk
- Department
of Physics, University of Basel, Klingelbergstrasse 82, Basel 4056, Switzerland
| | - Mehdi Heydari
- Laboratory
for X-ray Nanoscience and Technologies, Paul Scherrer Institute, Villigen-PSI 5232, Switzerland
- Department
of Physics, University of Basel, Klingelbergstrasse 82, Basel 4056, Switzerland
| | - Luiza Buimaga-Iarinca
- National
Institute for Research and Development of Isotopic and Molecular Technologies
(INCDTIM), Donat Str., Cluj-Napoca 67-103, Romania
| | - Christian Wäckerlin
- Laboratory
for X-ray Nanoscience and Technologies, Paul Scherrer Institute, Villigen-PSI 5232, Switzerland
- Institute
of Physics, École Polytechnique Fédérale de Lausanne Station 3, Lausanne 1015, Switzerland
| | - Elena Lucenti
- Institute
of Chemical Sciences and Technologies “Giulio Natta”
(SCITEC) of CNR, via Golgi 19, Milano 20133, Italy
| | - Silvio Decurtins
- Department
of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Freiestrasse 3, Bern 3012, Switzerland
| | - Elena Cariati
- Institute
of Chemical Sciences and Technologies “Giulio Natta”
(SCITEC) of CNR, via Golgi 19, Milano 20133, Italy
- Department
of Chemistry, Università degli Studi di Milano and INSTM RU Via Golgi 19, Milano 20133, Italy
| | - Thomas A. Jung
- Laboratory
for X-ray Nanoscience and Technologies, Paul Scherrer Institute, Villigen-PSI 5232, Switzerland
- Department
of Physics, University of Basel, Klingelbergstrasse 82, Basel 4056, Switzerland
| | - Ulrich Aschauer
- Department
of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Freiestrasse 3, Bern 3012, Switzerland
- Department
of Chemistry and Physics of Materials, University
of Salzburg, Jakob-Haringer-Str. 2A, Salzburg 5020, Austria
| | - Shi-Xia Liu
- Department
of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Freiestrasse 3, Bern 3012, Switzerland
| |
Collapse
|
2
|
Monolayer and Bilayer Formation of Molecular 2D Networks Assembled at the Liquid/Solid Interfaces by Solution-Based Drop-Cast Method. Molecules 2021; 26:molecules26247707. [PMID: 34946789 PMCID: PMC8706512 DOI: 10.3390/molecules26247707] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2021] [Revised: 12/11/2021] [Accepted: 12/12/2021] [Indexed: 11/19/2022] Open
Abstract
In recent years, extending self-assembled structures from two-dimensions (2D) to three-dimensions (3D) has been a paradigm in surface supramolecular chemistry and contemporary nanotechnology. Using organic molecules of p-terphenyl-3,5,3′,5′-tetracarboxylic acid (TPTC), and scanning tunneling microscopy (STM), we present a simple route, that is the control of the solute solubility in a sample solution, to achieve the vertical growth of supramolecular self-assemblies, which would otherwise form monolayers at the organic solvent/graphite interface. Presumably, the bilayer formations were based on π-conjugated overlapped molecular dimers that worked as nuclei to induce the yielding of the second layer. We also tested other molecules, including trimesic acid (TMA) and 1,3,5-tris(4-carboxyphenyl)-benzene (BTB), as well as the further application of our methodology, demonstrating the facile preparation of layered assemblies.
Collapse
|
3
|
Reaction selectivity of homochiral versus heterochiral intermolecular reactions of prochiral terminal alkynes on surfaces. Nat Commun 2019; 10:4122. [PMID: 31511503 PMCID: PMC6739358 DOI: 10.1038/s41467-019-12102-y] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2019] [Accepted: 08/16/2019] [Indexed: 11/08/2022] Open
Abstract
Controlling selectivity between homochiral and heterochiral reaction pathways on surfaces remains a great challenge. Here, competing reactions of a prochiral alkyne on Ag(111): two-dimensional (2D) homochiral Glaser coupling and heterochiral cross-coupling with a Bergman cyclization step have been examined. We demonstrate control strategies in steering the reactions between the homochiral and heterochiral pathways by tuning the precursor substituents and the kinetic parameters, as confirmed by high-resolution scanning probe microscopy (SPM). Control experiments and density functional theory (DFT) calculations reveal that the template effect of organometallic chains obtained under specific kinetic conditions enhances Glaser coupling between homochiral molecules. In contrast, for the reaction of free monomers, the kinetically favorable reaction pathway is the cross-coupling between two heterochiral molecules (one of them involving cyclization). This work demonstrates the application of kinetic control to steer chiral organic coupling pathways at surfaces. Controlling selectivity between homochiral and heterochiral reaction pathways on surfaces is intriguing but challenging. Here, the authors demonstrate strategies in steering the reactions of prochiral terminal alkynes between the homochiral and heterochiral pathways by tuning the precursor substituents and the kinetic parameters.
Collapse
|
4
|
Wang YL, Sun K, Tu YB, Tao ML, Xie ZB, Yuan HK, Xiong ZH, Wang JZ. Chirality switching of the self-assembled CuPc domains induced by electric field. Phys Chem Chem Phys 2018; 20:7125-7131. [PMID: 29479594 DOI: 10.1039/c7cp08279g] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Chiral switching of the self-assembled domains of CuPc molecules on the Cd(0001) surface has been investigated by means of a low temperature scanning tunneling microscopy (STM). With the coverage increasing, the CuPc molecules show the structural evolutions from an initial gas-like state to a network phase, a square phase, and finally to a compact phase at full monolayer. In the network and square phases, the achiral CuPc molecules reveal both the point chirality and chiral domains. In particular, the chirality of network domain can be switched from one enantiomer to another driven by the electric filed from a STM tip, which can also lead to the lattice rotation of network phase. These results demonstrate that (i) there is strong interaction between the CuPc molecules and STM tip; (ii) the adsorbed CuPc molecules carry considerable net charge or polarizability due to the charge transfer; (iii) the network phase has a low barrier for the interconversion between right- and left-handed domains. Our findings are significant for the understanding and control of the domain's chirality in the self-assembled structures.
Collapse
Affiliation(s)
- Ya-Li Wang
- School of Physical Science and Technology, MOE Key Laboratory on Luminescence and Real-Time Analysis, Southwest University, Chongqing 400715, China.
| | | | | | | | | | | | | | | |
Collapse
|
5
|
Dutta S, Gellman AJ. Enantiomer surface chemistry: conglomerate versus racemate formation on surfaces. Chem Soc Rev 2018; 46:7787-7839. [PMID: 29165467 DOI: 10.1039/c7cs00555e] [Citation(s) in RCA: 67] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
Research on surface chirality is motivated by the need to develop functional chiral surfaces for enantiospecific applications. While molecular chirality in 3D has been the subject of study for almost two centuries, many aspects of 2D chiral surface chemistry have yet to be addressed. In 3D, racemic mixtures of chiral molecules tend to aggregate into racemate (molecularly heterochiral) crystals much more frequently than conglomerate (molecularly homochiral) crystals. Whether chiral adsorbates on surfaces preferentially aggregate into heterochiral rather than homochiral domains (2D crystals or clusters) is not known. In this review, we have made the first attempt to answer the following question based on available data: in 2D racemic mixtures adsorbed on surfaces, is there a clear preference for homochiral or heterochiral aggregation? The current hypothesis is that homochiral packing is preferred on surfaces; in contrast to 3D where heterochiral packing is more common. In this review, we present a simple hierarchical scheme to categorize the chirality of adsorbate-surface systems. We then review the body of work using scanning tunneling microscopy predominantly to study aggregation of racemic adsorbates. Our analysis of the existing literature suggests that there is no clear evidence of any preference for either homochiral or heterochiral aggregation at the molecular level by chiral and prochiral adsorbates on surfaces.
Collapse
Affiliation(s)
- Soham Dutta
- Department of Chemical Engineering, Carnegie Mellon University, Pittsburgh, PA 15213, USA.
| | | |
Collapse
|
6
|
Destoop I, Minoia A, Ivasenko O, Noguchi A, Tahara K, Tobe Y, Lazzaroni R, De Feyter S. Transfer of chiral information from a chiral solvent to a two-dimensional network. Faraday Discuss 2017; 204:215-231. [PMID: 28840217 DOI: 10.1039/c7fd00103g] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Chiral induction in self-assembled monolayers has garnered considerable attention in the recent past, not only due to its importance in chiral resolution and enantioselective heterogeneous catalysis but also because of its relevance to the origin of homochirality in life. Here, we demonstrate the emergence of homochirality in a supramolecular low-density network formed by achiral molecules at the interface of a chiral solvent and an atomically-flat achiral substrate. We focus on the impact of structure and functionality of the adsorbate and the chiral solvent on the chiral induction efficiency in self-assembled physisorbed monolayers, as revealed by scanning tunneling microscopy. Different induction mechanisms are proposed and evaluated, with the assistance of advanced molecular modeling simulations.
Collapse
Affiliation(s)
- Iris Destoop
- Division of Molecular Imaging and Photonics, Department of Chemistry, KU Leuven-University of Leuven, Celestijnenlaan 200F, B 3001, Leuven, Belgium.
| | | | | | | | | | | | | | | |
Collapse
|
7
|
Abstract
In the present review we survey the main advances made in recent years on the understanding of chemical chirality at solid surfaces. Chirality is an important topic, made particularly relevant by the homochiral nature of the biochemistry of life on Earth, and many chiral chemical reactions involve solid surfaces. Here we start our discussion with a description of surface chirality and of the different ways that chirality can be bestowed on solid surfaces. We then expand on the studies carried out to date to understand the adsorption of chiral compounds at a molecular level. We summarize the work published on the adsorption of pure enantiomers, of enantiomeric mixtures, and of prochiral molecules on chiral and achiral model surfaces, especially on well-defined metal single crystals but also on other flat substrates such as highly ordered pyrolytic graphite. Several phenomena are identified, including surface reconstruction and chiral imprinting upon adsorption of chiral agents, and the enhancement or suppression of enantioselectivity seen in some cases upon adsorption of enantiomixtures of chiral compounds. The possibility of enhancing the enantiopurity of adsorbed layers upon the addition of chiral seeds and the so-called "sergeants and soldiers" phenomenon are presented. Examples are provided where the chiral behavior has been associated with either thermodynamic or kinetic driving forces. Two main approaches to the creation of enantioselective surface sites are discussed, namely, via the formation of supramolecular chiral ensembles made out of small chiral adsorbates, and by adsorption of more complex chiral molecules capable of providing suitable chiral environments for reactants by themselves, via the formation of individual adsorbate:modifier adducts on the surface. Finally, a discussion is offered on the additional effects generated by the presence of the liquid phase often required in practical applications such as enantioselective crystallization, chiral chromatography, and enantioselective catalysis.
Collapse
Affiliation(s)
- Francisco Zaera
- Department of Chemistry and UCR Center for Catalysis, University of California, Riverside, CA 92521, USA.
| |
Collapse
|
8
|
Darling GR, Forster M, Lin C, Liu N, Raval R, Hodgson A. Chiral segregation driven by a dynamical response of the adsorption footprint to the local adsorption environment: bitartrate on Cu(110). Phys Chem Chem Phys 2017; 19:7617-7623. [DOI: 10.1039/c7cp00622e] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
Bitartrate, a strongly bound chiral modifier, is able to restructure its adsorption footprint on Cu(110) in response to local adsorbates.
Collapse
Affiliation(s)
- G. R. Darling
- Surface Science Research Centre and Department of Chemistry
- University of Liverpool
- Liverpool L69 3BX
- UK
| | - M. Forster
- Surface Science Research Centre and Department of Chemistry
- University of Liverpool
- Liverpool L69 3BX
- UK
| | - C. Lin
- Surface Science Research Centre and Department of Chemistry
- University of Liverpool
- Liverpool L69 3BX
- UK
| | - N. Liu
- Surface Science Research Centre and Department of Chemistry
- University of Liverpool
- Liverpool L69 3BX
- UK
| | - R. Raval
- Surface Science Research Centre and Department of Chemistry
- University of Liverpool
- Liverpool L69 3BX
- UK
| | - A. Hodgson
- Surface Science Research Centre and Department of Chemistry
- University of Liverpool
- Liverpool L69 3BX
- UK
| |
Collapse
|
9
|
Cao H, Destoop I, Tahara K, Tobe Y, Mali KS, De Feyter S. Complex Chiral Induction Processes at the Solution/Solid Interface. THE JOURNAL OF PHYSICAL CHEMISTRY. C, NANOMATERIALS AND INTERFACES 2016; 120:17444-17453. [PMID: 29296135 PMCID: PMC5747489 DOI: 10.1021/acs.jpcc.6b04911] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/15/2016] [Revised: 07/03/2016] [Indexed: 06/07/2023]
Abstract
Two-dimensional supramolecular chirality is often achieved by confining molecules against a solid surface. The sergeants-soldiers principle is a popular strategy to fabricate chiral surfaces using predominantly achiral molecules. In this method, achiral molecules (the soldiers) are forced to assemble in a chiral fashion by mixing them with a small percentage of structurally similar chiral molecules (the sergeants). The full complexity of the amplification processes in chiral induction studies is rarely revealed due to the specific experimental conditions used. Here we report the evolution of chirality in mixed supramolecular networks of chiral and achiral dehydrobenzo[12]annulene (DBA) derivatives using scanning tunneling microscopy (STM) at the solution/solid interface. The experiments were carried out in the high sergeants-soldiers mole ratio regime in relatively concentrated solutions. Variation in the sergeants/soldiers composition at a constant solution concentration revealed different mole ratio regimes where either amplification of supramolecular handedness as defined by the sergeant chirality or its reversal was observed. The chiral induction/reversal processes were found to be a convolution of different phenomena occurring at the solution-solid interface namely, structural polymorphism, competitive adsorption and adaptive host-guest recognition. Grasping the full complexity of chiral amplification processes as described here is a stepping-stone toward developing a predictive understanding of chiral amplification processes.
Collapse
Affiliation(s)
- Hai Cao
- Division
of Molecular Imaging and Photonics, Department of Chemistry, KU Leuven−University of Leuven, Celestijnenlaan 200F, B3001 Leuven, Belgium
| | - Iris Destoop
- Division
of Molecular Imaging and Photonics, Department of Chemistry, KU Leuven−University of Leuven, Celestijnenlaan 200F, B3001 Leuven, Belgium
| | - Kazukuni Tahara
- Division
of Frontier Materials Science, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
- Department
of Applied Chemistry, School of Science and Technology, Meiji University, 1-1-1 Higashimita, Tama-ku, Kawasaki, 214-8571, Japan
| | - Yoshito Tobe
- Division
of Frontier Materials Science, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Kunal S. Mali
- Division
of Molecular Imaging and Photonics, Department of Chemistry, KU Leuven−University of Leuven, Celestijnenlaan 200F, B3001 Leuven, Belgium
| | - Steven De Feyter
- Division
of Molecular Imaging and Photonics, Department of Chemistry, KU Leuven−University of Leuven, Celestijnenlaan 200F, B3001 Leuven, Belgium
| |
Collapse
|