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Izquierdo E, López-Corrales M, Abad-Montero D, Rovira A, Fabriàs G, Bosch M, Abad JL, Marchán V. Fluorescently Labeled Ceramides and 1-Deoxyceramides: Synthesis, Characterization, and Cellular Distribution Studies. J Org Chem 2022; 87:16351-16367. [PMID: 36441972 PMCID: PMC9764360 DOI: 10.1021/acs.joc.2c02019] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Ceramides (Cer) are bioactive sphingolipids that have been proposed as potential disease biomarkers since they are involved in several cellular stress responses, including apoptosis and senescence. 1-Deoxyceramides (1-deoxyCer), a particular subtype of noncanonical sphingolipids, have been linked to the pathogenesis of type II diabetes. To investigate the metabolism of these bioactive lipids, as well as to have a better understanding of the signaling processes where they participate, it is essential to expand the toolbox of fluorescent sphingolipid probes exhibiting complementary subcellular localization. Herein, we describe a series of new sphingolipid probes tagged with two different organic fluorophores, a far-red/NIR-emitting coumarin derivative (COUPY) and a green-emitting BODIPY. The assembly of the probes involved a combination of olefin cross metathesis and click chemistry reactions as key steps, and these fluorescent ceramide analogues exhibited excellent emission quantum yields, being the Stokes' shifts of the COUPY derivatives much higher than those of the BODIPY counterparts. Confocal microscopy studies in HeLa cells confirmed an excellent cellular permeability for these sphingolipid probes and revealed that most of the vesicles stained by COUPY probes were either lysosomes or endosomes, whereas BODIPY probes accumulated either in Golgi apparatus or in nonlysosomal intracellular vesicles. The fact that the two sets of fluorescent Cer probes have such different staining patterns indicates that their subcellular distribution is not entirely defined by the sphingolipid moiety but rather influenced by the fluorophore.
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Affiliation(s)
- Eduardo Izquierdo
- Departament
de Química Inorgànica i Orgànica, Secció
de Química Orgànica, Universitat de Barcelona (UB), Martí i Franquès 1-11, 08028Barcelona, Spain
| | - Marta López-Corrales
- Departament
de Química Inorgànica i Orgànica, Secció
de Química Orgànica, Universitat de Barcelona (UB), Martí i Franquès 1-11, 08028Barcelona, Spain
| | - Diego Abad-Montero
- Departament
de Química Inorgànica i Orgànica, Secció
de Química Orgànica, Universitat de Barcelona (UB), Martí i Franquès 1-11, 08028Barcelona, Spain,Research
Unit on BioActive Molecules, Departament de Química Biològica, Institut de Química Avançada de Catalunya
(IQAC-CSIC), Jordi Girona
18-26, 08034Barcelona, Spain
| | - Anna Rovira
- Departament
de Química Inorgànica i Orgànica, Secció
de Química Orgànica, Universitat de Barcelona (UB), Martí i Franquès 1-11, 08028Barcelona, Spain
| | - Gemma Fabriàs
- Research
Unit on BioActive Molecules, Departament de Química Biològica, Institut de Química Avançada de Catalunya
(IQAC-CSIC), Jordi Girona
18-26, 08034Barcelona, Spain
| | - Manel Bosch
- Unitat
de Microscòpia Òptica Avanc̨ada, Centres Científics
i Tecnològics, Universitat de Barcelona
(UB), Av. Diagonal, 643, 08028Barcelona, Spain
| | - José Luís Abad
- Research
Unit on BioActive Molecules, Departament de Química Biològica, Institut de Química Avançada de Catalunya
(IQAC-CSIC), Jordi Girona
18-26, 08034Barcelona, Spain,
| | - Vicente Marchán
- Departament
de Química Inorgànica i Orgànica, Secció
de Química Orgànica, Universitat de Barcelona (UB), Martí i Franquès 1-11, 08028Barcelona, Spain,Institut
de Biomedicina de la Universitat de Barcelona (IBUB), 08028Barcelona, Spain,
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Hirano K, Kinoshita M, Matsumori N. Impact of sphingomyelin acyl chain heterogeneity upon properties of raft-like membranes. BIOCHIMICA ET BIOPHYSICA ACTA. BIOMEMBRANES 2022; 1864:184036. [PMID: 36055359 DOI: 10.1016/j.bbamem.2022.184036] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2022] [Revised: 07/26/2022] [Accepted: 08/15/2022] [Indexed: 06/15/2023]
Abstract
Sphingomyelin (SM) is a main component of lipid rafts and characteristic of abundance of long and saturated acyl chains. Recently, we reported that fluorescence-labeled lipids including C16:0 and C18:0SMs retained membrane behaviors of inherent lipids. Here, we newly prepared fluorescent SMs with longer acyl chains, C22:0 and C24:1, for observing their partition and diffusion in SM/cholesterol (chol)/dioleoylphosphatidylcholine (DOPC) bilayers. Although fluorescent C24:1SM underwent a uniform distribution between ordered (Lo) and disordered (Ld) phases, other fluorescent SMs with saturated acyl chains were preferentially distributed in the Lo phase. Interestingly, when the acyl chains of fluorescent and membrane SMs are different, distribution of fluorescent SM to the Lo phase was reduced compared to when the acyl chains are the same. This tendency was also observed for C16:0SM/C22:0SM/chol/DOPC quaternary bilayers, where the minor SM was more excluded out of the Lo phase than the major SM. We also found that the coexistence of SMs induces SM efflux out of the Lo phase and simultaneous DOPC influx to the Lo phase, consequently reducing the difference in fluidity between the two phases. These results suggest that physicochemical properties of lipid rafts are regulated by the acyl chain heterogeneity of SMs.
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Affiliation(s)
- Kana Hirano
- Department of Chemistry, Graduate School of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Masanao Kinoshita
- Department of Chemistry, Graduate School of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan.
| | - Nobuaki Matsumori
- Department of Chemistry, Graduate School of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan.
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Inimitable Impacts of Ceramides on Lipid Rafts Formed in Artificial and Natural Cell Membranes. MEMBRANES 2022; 12:membranes12080727. [PMID: 35893445 PMCID: PMC9330320 DOI: 10.3390/membranes12080727] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/05/2022] [Revised: 07/19/2022] [Accepted: 07/20/2022] [Indexed: 02/02/2023]
Abstract
Ceramide is the simplest precursor of sphingolipids and is involved in a variety of biological functions ranging from apoptosis to the immune responses. Although ceramide is a minor constituent of plasma membranes, it drastically increases upon cellular stimulation. However, the mechanistic link between ceramide generation and signal transduction remains unknown. To address this issue, the effect of ceramide on phospholipid membranes has been examined in numerous studies. One of the most remarkable findings of these studies is that ceramide induces the coalescence of membrane domains termed lipid rafts. Thus, it has been hypothesised that ceramide exerts its biological activity through the structural alteration of lipid rafts. In the present article, we first discuss the characteristic hydrogen bond functionality of ceramides. Then, we showed the impact of ceramide on the structures of artificial and cell membranes, including the coalescence of the pre-existing lipid raft into a large patch called a signal platform. Moreover, we proposed a possible structure of the signal platform, in which sphingomyelin/cholesterol-rich and sphingomyelin/ceramide-rich domains coexist. This structure is considered to be beneficial because membrane proteins and their inhibitors are separately compartmentalised in those domains. Considering the fact that ceramide/cholesterol content regulates the miscibility of those two domains in model membranes, the association and dissociation of membrane proteins and their inhibitors might be controlled by the contents of ceramide and cholesterol in the signal platform.
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Yasuda H, Torikai K, Kinoshita M, Sazzad MAA, Tsujimura K, Slotte JP, Matsumori N. Preparation of Nitrogen Analogues of Ceramide and Studies of Their Aggregation in Sphingomyelin Bilayers. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2021; 37:12438-12446. [PMID: 34636580 DOI: 10.1021/acs.langmuir.1c02101] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Ceramides can regulate biological processes probably through the formation of laterally segregated and highly packed ceramide-rich domains in lipid bilayers. In the course of preparation of its analogues, we found that a hydrogen-bond-competent functional group in the C1 position is necessary to form ceramide-rich domains in lipid bilayers [Matsufuji; Langmuir 2018]. Hence, in the present study, we newly synthesized three ceramide analogues: CerN3, CerNH2, and CerNHAc, in which the 1-OH group of ceramide is substituted with a nitrogen functionality. CerNH2 and CerNHAc are capable of forming hydrogen bonds in their headgroups, whereas CerN3 is not. Fluorescent microscopy observation and differential scanning calorimetry analysis disclosed that these ceramide analogues formed ceramide-rich phases in sphingomyelin bilayers, although their thermal stability was slightly inferior to that of normal ceramides. Moreover, wide-angle X-ray diffraction analysis showed that the chain packing structure of ceramide-rich phases of CerNHAc and CerN3 was similar to that of normal ceramide, while the CerNH2-rich phase showed a slightly looser chain packing due to the formation of CerNH3+. Although the domain formation of CerN3 was unexpected because of the lack of hydrogen-bond capability in the headgroup, it may become a promising tool for investigating the mechanistic link between the ceramide-rich phase and the ceramide-related biological functions owing to its Raman activity and applicability to click chemistry.
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Affiliation(s)
- Hiroki Yasuda
- Department of Chemistry, Graduate School of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Kohei Torikai
- Department of Chemistry, Graduate School of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
- Faculty of Chemistry, National University of Uzbekistan named after Mirzo Ulugbek, 4 University Str., Tashkent 100174, Uzbekistan
| | - Masanao Kinoshita
- Department of Chemistry, Graduate School of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Md Abdullah Al Sazzad
- Biochemistry, Faculty of Science and Engineering, Åbo Akademi University, Tykistökatu 6A, FI 20520 Turku, Finland
| | - Koya Tsujimura
- Department of Chemistry, Graduate School of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
| | - J Peter Slotte
- Biochemistry, Faculty of Science and Engineering, Åbo Akademi University, Tykistökatu 6A, FI 20520 Turku, Finland
| | - Nobuaki Matsumori
- Department of Chemistry, Graduate School of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
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Akiyama R, Annaka M, Kohda D, Kubota H, Maeda Y, Matsumori N, Mizuno D, Yoshida N. Biophysics at Kyushu University. Biophys Rev 2020; 12:245-247. [PMID: 32067193 PMCID: PMC7242550 DOI: 10.1007/s12551-020-00643-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2020] [Accepted: 02/09/2020] [Indexed: 12/13/2022] Open
Affiliation(s)
- Ryo Akiyama
- Department of Chemistry, Kyushu University, Fukuoka, 819-0395, Japan.
| | - Masahiko Annaka
- Department of Chemistry, Kyushu University, Fukuoka, 819-0395, Japan
| | - Daisuke Kohda
- Medical Institute of Bioregulation, Kyushu University, Fukuoka, 812-8582, Japan
| | - Hiroyuki Kubota
- Medical Institute of Bioregulation, Kyushu University, Fukuoka, 812-8582, Japan
| | - Yusuke Maeda
- Department of Physics, Kyushu University, Fukuoka, 819-0395, Japan
| | - Nobuaki Matsumori
- Department of Chemistry, Kyushu University, Fukuoka, 819-0395, Japan
| | - Daisuke Mizuno
- Department of Physics, Kyushu University, Fukuoka, 819-0395, Japan
| | - Norio Yoshida
- Department of Chemistry, Kyushu University, Fukuoka, 819-0395, Japan
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The influence of ceramide and its dihydro analog on the physico-chemical properties of sphingomyelin bilayers. Chem Phys Lipids 2020; 226:104835. [DOI: 10.1016/j.chemphyslip.2019.104835] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2019] [Revised: 10/12/2019] [Accepted: 10/15/2019] [Indexed: 11/20/2022]
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Al Sazzad MA, Yasuda T, Nyholm TKM, Slotte JP. Lateral Segregation of Palmitoyl Ceramide-1-Phosphate in Simple and Complex Bilayers. Biophys J 2019; 117:36-45. [PMID: 31133285 DOI: 10.1016/j.bpj.2019.05.015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2019] [Revised: 05/10/2019] [Accepted: 05/15/2019] [Indexed: 10/26/2022] Open
Abstract
Ceramide-1-phosphate is a minor sphingolipid with important functions in cell signaling. In this study, we examined the propensity of palmitoyl ceramide-1-phosphate (Cer-1P) to segregate laterally into ordered domains in different bilayer compositions at 23 and 37°C and compared this with segregation of palmitoyl ceramide (PCer) and palmitoyl sphingomyelin (PSM). The ordered-domain formation in the fluid phosphatidylcholine bilayers was determined using the emission lifetime changes of trans-parinaric acid and from differential scanning calorimetry thermograms. The lateral segregation of Cer-1P was examined when hydrated to bilayers in Tris buffer (50 mM Tris, 140 mM NaCl (pH 7.4)). At this pH, Cer-1P was negatively charged. The lateral segregation propensity of Cer-1P in 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) bilayers was intermediate between PCer and PSM. Based on differential scanning calorimetry analysis, we observed that the gel domains formed by Cer-1P in POPC bilayers (POPC:Cer-1P 70:30 by mol) were less stable (melting interval 16-37°C) than the corresponding POPC and PCer gel domains at equal composition (melting interval 20-55°C). The gel-phase melting enthalpy was also much lower in Cer-1P (1.5 kcal/mol) than in the PCer-containing POPC bilayers (9 kcal/mol). Cer-1P appeared to be at least partially miscible with PCer domains in POPC bilayers. Cer-1P domains were stabilized in the presence of PSM (POPC:PSM 85:15), similarly as seen with PCer-rich domains. In bilayers at 37°C, with an approximate outer-leaflet cell membrane composition (sphingomyelin and cholesterol enriched, aminophospholipid poor), Cer-1P segregation did not lead to the formation of ordered domains, at least when compared with PCer segregation. In bilayers with an approximate inner-leaflet composition (sphingomyelin poor, cholesterol and aminophospholipid enriched), Cer-1P also failed to form ordered domains. PCer segregated into ordered domains only after the PCer/cholesterol ratio exceeded an approximate equimolar ratio.
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Affiliation(s)
- Md Abdullah Al Sazzad
- Biochemistry, Faculty of Science and Engineering, Åbo Akademi University, Turku, Finland
| | - Tomokazu Yasuda
- Research Foundation Itsuu Laboratory, Takatsu-ku, Kawasaki, Kanagawa, Japan
| | - Thomas K M Nyholm
- Biochemistry, Faculty of Science and Engineering, Åbo Akademi University, Turku, Finland
| | - J Peter Slotte
- Biochemistry, Faculty of Science and Engineering, Åbo Akademi University, Turku, Finland.
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