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Collins JM, Singh SK, White TA, Cesta DJ, Simpson CL, Tubb LJ, Houser CL. Total wash elimination for solid phase peptide synthesis. Nat Commun 2023; 14:8168. [PMID: 38071224 PMCID: PMC10710472 DOI: 10.1038/s41467-023-44074-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2023] [Accepted: 11/29/2023] [Indexed: 12/18/2023] Open
Abstract
We present a process for solid phase peptide synthesis (SPPS) that completely eliminates all solvent intensive washing steps during each amino acid addition cycle. A key breakthrough is the removal of a volatile Fmoc deprotection base through bulk evaporation at elevated temperature while preventing condensation on the vessel surfaces with a directed headspace gas flushing. This process was demonstrated at both research and production scales without any impact on product quality and when applied to a variety of challenging sequences (up to 89 amino acids in length). The overall result is an extremely fast, high purity, scalable process with a massive waste reduction (up to 95%) while only requiring 10-15% of the standard amount of base used. This transformation of SPPS represents a step-change in peptide manufacturing process efficiency, and should encourage expanded access to peptide-based therapeutics.
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Affiliation(s)
- Jonathan M Collins
- Peptide Synthesis Research, CEM Corporation, 3100 Smith Farm Rd, Matthews, NC, 28104, USA.
| | - Sandeep K Singh
- Peptide Synthesis Research, CEM Corporation, 3100 Smith Farm Rd, Matthews, NC, 28104, USA
| | - Travis A White
- Peptide Synthesis Research, CEM Corporation, 3100 Smith Farm Rd, Matthews, NC, 28104, USA
| | - Drew J Cesta
- Peptide Synthesis Research, CEM Corporation, 3100 Smith Farm Rd, Matthews, NC, 28104, USA
| | - Colin L Simpson
- Peptide Synthesis Research, CEM Corporation, 3100 Smith Farm Rd, Matthews, NC, 28104, USA
| | - Levi J Tubb
- Peptide Synthesis Research, CEM Corporation, 3100 Smith Farm Rd, Matthews, NC, 28104, USA
| | - Christopher L Houser
- Peptide Synthesis Research, CEM Corporation, 3100 Smith Farm Rd, Matthews, NC, 28104, USA
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Orlandin A, Guryanov I, Ferrazzano L, Biondi B, Biscaglia F, Storti C, Rancan M, Formaggio F, Ricci A, Cabri W. Carbodiimide-Mediated Beckmann Rearrangement of Oxyma-B as a Side Reaction in Peptide Synthesis. Molecules 2022; 27:molecules27134235. [PMID: 35807480 PMCID: PMC9268172 DOI: 10.3390/molecules27134235] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2022] [Revised: 06/27/2022] [Accepted: 06/28/2022] [Indexed: 12/10/2022] Open
Abstract
The suppression of side reactions is one of the most important objectives in peptide synthesis, where highly reactive compounds are involved. Recently, the violuric acid derivative Oxyma-B was introduced into peptide synthesis protocols as a promising additive to efficiently control the optical purity of the amino acids prone to racemization. However, we discovered a side reaction involving the Beckmann rearrangement of Oxyma-B during the coupling reaction, which compromises the yield and purity of the target peptides. Here, we present the investigation of the mechanism of this rearrangement and the optimization of the coupling reaction conditions to control it. These results can be taken into account for the design of novel efficient oxime-based coupling reagents.
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Affiliation(s)
- Andrea Orlandin
- Fresenius Kabi iPSUM Srl, Via San Leonardo 23, 45010 Villadose, Italy; (A.O.); (W.C.)
| | - Ivan Guryanov
- Fresenius Kabi iPSUM Srl, Via San Leonardo 23, 45010 Villadose, Italy; (A.O.); (W.C.)
- Institute of Chemistry, St. Petersburg State University, Peterhof, Universitetskij pr. 26, 198504 St. Petersburg, Russia
- Correspondence: (I.G.); (A.R.)
| | - Lucia Ferrazzano
- Department of Chemistry “Giacomo Ciamician”, University of Bologna, Via Selmi 2, 40126 Bologna, Italy;
| | - Barbara Biondi
- ICB, Padova Unit, CNR, Department of Chemistry, University of Padova, Via Marzolo 1, 35131 Padova, Italy; (B.B.); (F.B.); (C.S.); (F.F.)
| | - Francesca Biscaglia
- ICB, Padova Unit, CNR, Department of Chemistry, University of Padova, Via Marzolo 1, 35131 Padova, Italy; (B.B.); (F.B.); (C.S.); (F.F.)
| | - Claudia Storti
- ICB, Padova Unit, CNR, Department of Chemistry, University of Padova, Via Marzolo 1, 35131 Padova, Italy; (B.B.); (F.B.); (C.S.); (F.F.)
| | - Marzio Rancan
- ICMATE, CNR, Department of Chemistry, University of Padova, Via Marzolo 1, 35131 Padova, Italy;
| | - Fernando Formaggio
- ICB, Padova Unit, CNR, Department of Chemistry, University of Padova, Via Marzolo 1, 35131 Padova, Italy; (B.B.); (F.B.); (C.S.); (F.F.)
| | - Antonio Ricci
- Fresenius Kabi iPSUM Srl, Via San Leonardo 23, 45010 Villadose, Italy; (A.O.); (W.C.)
- Correspondence: (I.G.); (A.R.)
| | - Walter Cabri
- Fresenius Kabi iPSUM Srl, Via San Leonardo 23, 45010 Villadose, Italy; (A.O.); (W.C.)
- Department of Chemistry “Giacomo Ciamician”, University of Bologna, Via Selmi 2, 40126 Bologna, Italy;
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