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Taylor CJ, Pomberger A, Felton KC, Grainger R, Barecka M, Chamberlain TW, Bourne RA, Johnson CN, Lapkin AA. A Brief Introduction to Chemical Reaction Optimization. Chem Rev 2023; 123:3089-3126. [PMID: 36820880 PMCID: PMC10037254 DOI: 10.1021/acs.chemrev.2c00798] [Citation(s) in RCA: 62] [Impact Index Per Article: 31.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2022] [Indexed: 02/24/2023]
Abstract
From the start of a synthetic chemist's training, experiments are conducted based on recipes from textbooks and manuscripts that achieve clean reaction outcomes, allowing the scientist to develop practical skills and some chemical intuition. This procedure is often kept long into a researcher's career, as new recipes are developed based on similar reaction protocols, and intuition-guided deviations are conducted through learning from failed experiments. However, when attempting to understand chemical systems of interest, it has been shown that model-based, algorithm-based, and miniaturized high-throughput techniques outperform human chemical intuition and achieve reaction optimization in a much more time- and material-efficient manner; this is covered in detail in this paper. As many synthetic chemists are not exposed to these techniques in undergraduate teaching, this leads to a disproportionate number of scientists that wish to optimize their reactions but are unable to use these methodologies or are simply unaware of their existence. This review highlights the basics, and the cutting-edge, of modern chemical reaction optimization as well as its relation to process scale-up and can thereby serve as a reference for inspired scientists for each of these techniques, detailing several of their respective applications.
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Affiliation(s)
- Connor J. Taylor
- Astex
Pharmaceuticals, 436 Cambridge Science Park, Milton Road, Cambridge CB4 0QA, U.K.
- Innovation
Centre in Digital Molecular Technologies, Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, U.K.
| | - Alexander Pomberger
- Innovation
Centre in Digital Molecular Technologies, Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, U.K.
| | - Kobi C. Felton
- Department
of Chemical Engineering and Biotechnology, University of Cambridge, Philippa Fawcett Drive, Cambridge CB3 0AS, U.K.
| | - Rachel Grainger
- Astex
Pharmaceuticals, 436 Cambridge Science Park, Milton Road, Cambridge CB4 0QA, U.K.
| | - Magda Barecka
- Chemical
Engineering Department, Northeastern University, 360 Huntington Avenue, Boston, Massachusetts 02115, United States
- Chemistry
and Chemical Biology Department, Northeastern
University, 360 Huntington Avenue, Boston, Massachusetts 02115, United States
- Cambridge
Centre for Advanced Research and Education in Singapore, 1 Create Way, 138602 Singapore
| | - Thomas W. Chamberlain
- Institute
of Process Research and Development, School of Chemistry and School
of Chemical and Process Engineering, University
of Leeds, Leeds LS2 9JT, U.K.
| | - Richard A. Bourne
- Institute
of Process Research and Development, School of Chemistry and School
of Chemical and Process Engineering, University
of Leeds, Leeds LS2 9JT, U.K.
| | | | - Alexei A. Lapkin
- Innovation
Centre in Digital Molecular Technologies, Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, U.K.
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2
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McMullen JP, Wyvratt BM. Automated optimization under dynamic flow conditions. REACT CHEM ENG 2023. [DOI: 10.1039/d2re00256f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]
Abstract
The combination of feedback optimization with dynamic operations leads to enhanced data-rich experimentation in flow.
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Affiliation(s)
| | - Brian M. Wyvratt
- Merck & Co., Inc., 26 East Lincoln Avenue, Rahway, NJ, 07065, USA
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3
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Abstract
In the past decade, the field of organic synthesis has witnessed tremendous advancements in the areas of photoredox catalysis, electrochemistry, C-H activation, reductive coupling and flow chemistry. While these methods and technologies offer many strategic advantages in streamlining syntheses, their application on the process scale is complicated by several factors. In this Review, we discuss the challenges that arise when these reaction classes and/or flow chemistry technology are taken from a research laboratory operating at the milligram scale to a reactor capable of producing kilograms of product. We discuss how these challenges have been overcome through chemical and engineering solutions. Specifically, this Review will highlight key examples that have led to the production of multi-hundred-gram to kilogram quantities of active pharmaceutical ingredients or their intermediates and will provide insight on the scaling-up process to those developing new technologies and reactions.
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Hu C. Reactor design and selection for effective continuous manufacturing of pharmaceuticals. J Flow Chem 2021; 11:243-263. [PMID: 34026279 PMCID: PMC8130218 DOI: 10.1007/s41981-021-00164-3] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2021] [Accepted: 04/14/2021] [Indexed: 11/23/2022]
Abstract
Pharmaceutical production remains one of the last industries that predominantly uses batch processes, which are inefficient and can cause drug shortages due to the long lead times or quality defects. Consequently, pharmaceutical companies are transitioning away from outdated batch lines, in large part motivated by the many advantages of continuous manufacturing (e.g., low cost, quality assurance, shortened lead time). As chemical reactions are fundamental to any drug production process, the selection of reactor and its design are critical to enhanced performance such as improved selectivity and yield. In this article, relevant theories, and models, as well as their required input data are summarized to assist the reader in these tasks, focusing on continuous reactions. Selected examples that describe the application of plug flow reactors (PFRs) and continuous-stirred tank reactors (CSTRs)-in-series within the pharmaceutical industry are provided. Process analytical technologies (PATs), which are important tools that provide real-time in-line continuous monitoring of reactions, are recommended to be considered during the reactor design process (e.g., port design for the PAT probe). Finally, other important points, such as density change caused by thermal expansion or solid precipitation, clogging/fouling, and scaling-up, are discussed. Graphical abstract
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Affiliation(s)
- Chuntian Hu
- CONTINUUS Pharmaceuticals, Woburn, MA 01801 USA
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Jurica JA, McMullen JP. Automation Technologies to Enable Data-Rich Experimentation: Beyond Design of Experiments for Process Modeling in Late-Stage Process Development. Org Process Res Dev 2021. [DOI: 10.1021/acs.oprd.0c00496] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Jon A. Jurica
- Process Research and Development, Merck & Co., Inc., P.O. Box 2000, Rahway, New Jersey 07065, United States
| | - Jonathan P. McMullen
- Process Research and Development, Merck & Co., Inc., P.O. Box 2000, Rahway, New Jersey 07065, United States
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Baumann M, Moody TS, Smyth M, Wharry S. Overcoming the Hurdles and Challenges Associated with Developing Continuous Industrial Processes. European J Org Chem 2020. [DOI: 10.1002/ejoc.202001278] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Marcus Baumann
- School of Chemistry Science Centre University College Dublin South Belfield D04 N2E2 Ireland
| | - Thomas S. Moody
- Almac Group Ltd. 20 Seagoe Industrial Estate Craigavon BT63 5QD United Kingdom
- Arran Chemical Company Unit 1 Monksland Industrial Estate Athlone, Co. Roscommon Ireland
| | - Megan Smyth
- Almac Group Ltd. 20 Seagoe Industrial Estate Craigavon BT63 5QD United Kingdom
| | - Scott Wharry
- Almac Group Ltd. 20 Seagoe Industrial Estate Craigavon BT63 5QD United Kingdom
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7
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Zhou J, Chen Z, He Y, Lin Z, Wang C, Li Z, Li J. Efficient scale up of photochemical bromination of conjugated allylic compounds in continuous-flow. J Flow Chem 2020. [DOI: 10.1007/s41981-020-00116-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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8
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Scaling continuous API synthesis from milligram to kilogram: extending the enabling benefits of micro to the plant. J Flow Chem 2020. [DOI: 10.1007/s41981-019-00060-x] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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9
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Baumann M, Moody TS, Smyth M, Wharry S. A Perspective on Continuous Flow Chemistry in the Pharmaceutical Industry. Org Process Res Dev 2020. [DOI: 10.1021/acs.oprd.9b00524] [Citation(s) in RCA: 167] [Impact Index Per Article: 33.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Marcus Baumann
- University College Dublin, School of Chemistry, Science Centre, South Belfield, Dublin 4, Ireland
| | - Thomas S. Moody
- Almac Group Ltd., 20 Seagoe Industrial Estate, Craigavon BT63 5QD, United Kingdom
- Arran Chemical Company, Unit 1 Monksland Industrial Estate, Athlone, Co. Roscommon N37 DN24, Ireland
| | - Megan Smyth
- Almac Group Ltd., 20 Seagoe Industrial Estate, Craigavon BT63 5QD, United Kingdom
| | - Scott Wharry
- Almac Group Ltd., 20 Seagoe Industrial Estate, Craigavon BT63 5QD, United Kingdom
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Fath V, Szmais S, Lau P, Kockmann N, Röder T. Model-Based Scale-Up Predictions: From Micro- to Millireactors Using Inline Fourier Transform Infrared Spectroscopy. Org Process Res Dev 2019. [DOI: 10.1021/acs.oprd.9b00265] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Verena Fath
- Department of Biochemical and Chemical Engineering, Equipment Design, TU Dortmund University, Emil-Figge-Str. 70, 44227 Dortmund, Germany
- Institute of Chemical Process Engineering, Mannheim University of Applied Sciences, Paul-Wittsack-Str. 10, 68163 Mannheim, Germany
| | | | - Philipp Lau
- Merck KGaA, Frankfurter Str. 250, 64293 Darmstadt, Germany
| | - Norbert Kockmann
- Department of Biochemical and Chemical Engineering, Equipment Design, TU Dortmund University, Emil-Figge-Str. 70, 44227 Dortmund, Germany
| | - Thorsten Röder
- Institute of Chemical Process Engineering, Mannheim University of Applied Sciences, Paul-Wittsack-Str. 10, 68163 Mannheim, Germany
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Salehi Marzijarani N, Snead DR, McMullen JP, Lévesque F, Weisel M, Varsolona RJ, Lam YH, Liu Z, Naber JR. One-Step Synthesis of 2-Fluoroadenine Using Hydrogen Fluoride Pyridine in a Continuous Flow Operation. Org Process Res Dev 2019. [DOI: 10.1021/acs.oprd.9b00178] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Affiliation(s)
- Nastaran Salehi Marzijarani
- Process Research & Development, MRL, Merck & Co. Inc., P.O. Box 2000, Rahway, New Jersey 07065, United States
| | - David R. Snead
- Process Research & Development, MRL, Merck & Co. Inc., P.O. Box 2000, Rahway, New Jersey 07065, United States
| | - Jonathan P. McMullen
- Process Research & Development, MRL, Merck & Co. Inc., P.O. Box 2000, Rahway, New Jersey 07065, United States
| | - François Lévesque
- Process Research & Development, MRL, Merck & Co. Inc., P.O. Box 2000, Rahway, New Jersey 07065, United States
| | - Mark Weisel
- Process Research & Development, MRL, Merck & Co. Inc., P.O. Box 2000, Rahway, New Jersey 07065, United States
| | - Richard J. Varsolona
- Process Research & Development, MRL, Merck & Co. Inc., P.O. Box 2000, Rahway, New Jersey 07065, United States
| | - Yu-hong Lam
- Modeling and Informatics, Merck & Co. Inc., P.O. Box 2000, Rahway, New Jersey 07065, United States
| | - Zhijian Liu
- Process Research & Development, MRL, Merck & Co. Inc., P.O. Box 2000, Rahway, New Jersey 07065, United States
| | - John R. Naber
- Process Research & Development, MRL, Merck & Co. Inc., P.O. Box 2000, Rahway, New Jersey 07065, United States
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12
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Affiliation(s)
- Daniel D. Caspi
- Research & Development, AbbVie Inc., 1 N Waukegan Road, North Chicago, Illinois 60064, United States
| | - Steven M. Richter
- Research & Development, AbbVie Inc., 1 N Waukegan Road, North Chicago, Illinois 60064, United States
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13
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Wyvratt BM, McMullen JP, Grosser ST. Multidimensional dynamic experiments for data-rich process development of reactions in flow. REACT CHEM ENG 2019. [DOI: 10.1039/c9re00078j] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
The use of multidimensional dynamic flow experiments for reaction profiling and generation of an empirical surface response model for a Knoevenagel condensation reaction is described.
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