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Breunig J, Valdes-Pena MA, Ratchford AW, Pierce JG. Total Synthesis and Microbiological Evaluation of Leopolic Acid A and Analogues. ACS BIO & MED CHEM AU 2024; 4:95-99. [PMID: 38645927 PMCID: PMC11027124 DOI: 10.1021/acsbiomedchemau.3c00068] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/21/2023] [Revised: 01/09/2024] [Accepted: 01/09/2024] [Indexed: 04/23/2024]
Abstract
New antimicrobial scaffolds are scarce, and there is a great need for the development of novel therapeutics. In this study, we report a convergent 9-step synthesis of leopolic acid A and a series of targeted analogues. The designed compounds allowed for incorporation of non-natural ureido dipeptide moieties and 4- and 5-position substituents around the 2,3-pyrrolidinedione of leopolic acid A. Leopolic acid A displayed modest antimicrobial activity (32 μg/mL) against MRSA, while the most active analogues displayed slightly improved activity (8-16 μg/mL). Additionally, several of the leopolic acid A analogues displayed promising antibiofilm activity, most notably having an MBEC:MIC ratio of ∼1. Overall, this work represents an initial SAR of the natural product and a framework for further optimization of these bioactive scaffolds within the context of bioactive pyrrolidinediones.
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Affiliation(s)
- Jamie
L. Breunig
- Department of Chemistry, Comparative
Medicine Institute, and Integrative Sciences Initiative, NC State University, Raleigh, North Carolina 27695, United States
| | - M. Alejandro Valdes-Pena
- Department of Chemistry, Comparative
Medicine Institute, and Integrative Sciences Initiative, NC State University, Raleigh, North Carolina 27695, United States
| | - Andrew W. Ratchford
- Department of Chemistry, Comparative
Medicine Institute, and Integrative Sciences Initiative, NC State University, Raleigh, North Carolina 27695, United States
| | - Joshua G. Pierce
- Department of Chemistry, Comparative
Medicine Institute, and Integrative Sciences Initiative, NC State University, Raleigh, North Carolina 27695, United States
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2
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Shahedi M, Omidi N, Habibi Z, Yousefi M, Brask J, Notash B, Mohammadi M. Biocatalytic stereoselective synthesis of pyrrolidine-2,3-diones containing all-carbon quaternary stereocenters. Org Biomol Chem 2023; 21:2742-2747. [PMID: 36916669 DOI: 10.1039/d2ob02294j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/11/2023]
Abstract
Highly functionalized pyrrolidine-2,3-diones can be synthesized efficiently and stereoselectively under mild conditions using a biocatalytic approach. The reaction led to the formation of new all-carbon quaternary stereocenters from Myceliophthora thermophila laccase (Novozym 51003) catalyzed oxidation of catechols to ortho-quinones and subsequent 1,4-addition with 3-hydroxy-1,5-dihydro-2H-pyrrol-2-ones. The reaction was conducted with various substituents on both reactants, resulting in 13 products in moderate to good yields (42-91%). The same 15 reactions were also tested with K3Fe(CN)6 as a catalyst, but here only one reaction resulted in a product (60% yield).
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Affiliation(s)
- Mansour Shahedi
- Department of Organic Chemistry, Shahid Beheshti University, 1983969411 Tehran, Iran.
| | - Niloofar Omidi
- Department of Organic Chemistry, Shahid Beheshti University, 1983969411 Tehran, Iran.
| | - Zohreh Habibi
- Department of Organic Chemistry, Shahid Beheshti University, 1983969411 Tehran, Iran.
| | - Maryam Yousefi
- Nanobiotechnology Research Center, Avicenna Research Institute, ACECR, Tehran, Iran.
| | - Jesper Brask
- Novozymes A/S, Krogshøjvej 36, 2880 Bagsværd, Copenhagen, Denmark
| | - Behrouz Notash
- Department of Inorganic Chemistry, Shahid Beheshti University, 1983969411 Tehran, Iran
| | - Mehdi Mohammadi
- Bioprocess Engineering Department, Institute of Industrial and Environmental Biotechnology, National Institute of Genetic Engineering and Biotechnology (NIGEB), Tehran, Iran
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3
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Yagci BB, Donmez SE, Şahin O, Türkmen YE. Catalytic aza-Nazarov cyclization reactions to access α-methylene-γ-lactam heterocycles. Beilstein J Org Chem 2023; 19:66-77. [PMID: 36741815 PMCID: PMC9874235 DOI: 10.3762/bjoc.19.6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2022] [Accepted: 01/10/2023] [Indexed: 01/19/2023] Open
Abstract
We have developed a catalytic aza-Nazarov reaction of N-acyliminium salts generated in situ from the reaction of a variety of cyclic and acyclic imines with α,β-unsaturated acyl chlorides to afford substituted α-methylene-γ-lactam heterocycles. The reactions proceed effectively in the presence of catalytic (20 mol %) amounts of AgOTf as an anion exchange agent or hydrogen-bond donors such as squaramides and thioureas as anion-binding organocatalysts. The aza-Nazarov cyclization of 3,4-dihydroisoquinolines with α,β-unsaturated acyl chlorides gives tricyclic lactam products 7 in up to 79% yield with full diastereocontrol (dr = >99:1). The use of acyclic imines in a similar catalytic aza-Nazarov reaction with 20 mol % of AgOTf results in the formation of α-methylene-γ-lactam heterocycles 19 in up to 76% yield and with good to high diastereoselectivities (4.3:1 to 16:1). We have demonstrated the scalability of the reaction with a gram-scale example. The relative stereochemistry of the α-methylene-γ-lactam products 19 has been determined via the single-crystal X-ray analysis of lactam 19l. In order to shed light on the details of the reaction mechanism, we have performed carefully designed mechanistic studies which consist of experiments on the effect of β-silicon stabilization, the alkene geometry of the α,β-unsaturated acyl chloride reactants, and adventitious water on the success of the catalytic aza-Nazarov reaction.
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Affiliation(s)
- Bilge Banu Yagci
- Department of Chemistry, Faculty of Science, Bilkent University, Ankara 06800, Turkey
| | - Selin Ezgi Donmez
- Department of Chemistry, Faculty of Science, Bilkent University, Ankara 06800, Turkey
| | - Onur Şahin
- Department of Occupational Health & Safety, Faculty of Health Sciences, Sinop University, Sinop 57000, Turkey
| | - Yunus Emre Türkmen
- Department of Chemistry, Faculty of Science, Bilkent University, Ankara 06800, Turkey
- UNAM – National Nanotechnology Research Center, Institute of Materials Science and Nanotechnology, Bilkent University, Ankara 06800, Turkey
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4
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Weng Z, Zhou Y, Yue X, Jiang F, Guo W. Regioselective α-addition of vinylogous α-ketoester enolate in organocatalytic asymmetric Michael reactions: enantioselective synthesis of Rauhut–Currier type products. RSC Adv 2022; 12:32056-32060. [DOI: 10.1039/d2ra06416b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2022] [Accepted: 10/27/2022] [Indexed: 11/11/2022] Open
Abstract
Catalytic asymmetric α-regioselective Michael additions of vinylogous α-ketoester enolate are described herein.
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Affiliation(s)
- Zhibing Weng
- School of Chemical and Pharmaceutical Engineering, Changzhou Vocational Institute of Engineering, Changzhou, China
- School of Pharmaceutical Sciences, Nanjing Tech University, Nanjing, China
| | - Ying Zhou
- School of Petrochemical Engineering, Changzhou University, Changzhou, China
| | - Xin Yue
- School of Petrochemical Engineering, Changzhou University, Changzhou, China
| | - Feng Jiang
- School of Petrochemical Engineering, Changzhou University, Changzhou, China
| | - Wengang Guo
- School of Petrochemical Engineering, Changzhou University, Changzhou, China
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5
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Massaro NP, Pierce JG. Rapid synthesis of the core scaffold of crinane and haemanthamine through a multi-component approach. Tetrahedron Lett 2021; 75. [PMID: 34176982 DOI: 10.1016/j.tetlet.2021.153201] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
A rapid synthesis of the core structures of crinane and haemanthamine has been developed, enabled by a multicomponent approach. This work constitutes a formal synthesis of crinane and sets the stage for access to both families of natural products and key analogues. A key highlight of the approach is the modularity of the core synthesis, overcoming existing challenges for these scaffolds and providing a path to explore site-selective oxidation to expand the scope of molecules accessible from common intermediates.
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Affiliation(s)
- Nicholas P Massaro
- Department of Chemistry and Comparative Medicine Institute, NC State University, Raleigh, NC 27695, USA
| | - Joshua G Pierce
- Department of Chemistry and Comparative Medicine Institute, NC State University, Raleigh, NC 27695, USA
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Valdes-Pena MA, Massaro NP, Lin YC, Pierce JG. Leveraging Marine Natural Products as a Platform to Tackle Bacterial Resistance and Persistence. Acc Chem Res 2021; 54:1866-1877. [PMID: 33733746 DOI: 10.1021/acs.accounts.1c00007] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Antimicrobial resistance to existing antibiotics represents one of the greatest threats to human health and is growing at an alarming rate. To further complicate treatment of bacterial infections, many chronic infections are the result of bacterial biofilms that are tolerant to treatment with antibiotics because of the presence of metabolically dormant persister cell populations. Together these threats are creating an increasing burden on the healthcare system, and a "preantibiotic" age is on the horizon if significant action is not taken by the scientific and medical communities. While the golden era of antibiotic discovery (1940s-1960s) produced most of the antibiotic classes in clinical use today, followed by several decades of limited development, there has been a resurgence in antibiotic drug discovery in recent years fueled by the academic and biotech sectors. Historically, great success has been achieved by developing next-generation variants of existing classes of antibiotics, but there remains a dire need for the identification of novel scaffolds and/or antimicrobial targets to drive future efforts to overcome resistance and tolerance. In this regard, there has been no more valuable source for the identification of antibiotics than natural products, with 69-77% of approved antibiotics either being such compounds or being derived from them.Our group has developed a program centered on the chemical synthesis and chemical microbiology of marine natural products with unusual structures and promising levels of activity against multidrug-resistant (MDR) bacterial pathogens. As we are motivated by preparing and studying the biological effects of these molecules, we are not initially pursuing a biological question but instead are allowing the observed phenotypes and activities to guide the ultimate project direction. In this Account, our recent efforts on the synoxazolidinone, lipoxazolidinone, and batzelladine natural products will be discussed and placed in the context of the field's greatest challenges and opportunities. Specifically, the synoxazolidinone family of 4-oxazolidinone-containing natural products has led to the development of several chemical methods to prepare antimicrobial scaffolds and has revealed compounds with potent activity as adjuvants to treat bacterial biofilms. Bearing the same 4-oxazolidinone core, the lipoxazolidinones have proven to be potent single-agent antibiotics. Finally, our synthetic efforts toward the batzelladines revealed analogues with activity against a number of MDR pathogens, highlighted by non-natural stereochemical isomers with superior activity and simplified synthetic access. Taken together, these studies provide several distinct platforms for the development of novel therapeutics that can add to our arsenal of scaffolds for preclinical development and can provide insight into the biochemical processes and pathways that can be targeted by small molecules in the fight against antimicrobial-resistant and -tolerant infections. We hope that this work will serve as inspiration for increased efforts by the scientific community to leverage synthetic chemistry and chemical microbiology toward novel antibiotics that can combat the growing crisis of MDR and tolerant bacterial infections.
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Affiliation(s)
- M. Alejandro Valdes-Pena
- Department of Chemistry and Comparative Medicine Institute, NC State University, Raleigh, North Carolina 27695, United States
| | - Nicholas P. Massaro
- Department of Chemistry and Comparative Medicine Institute, NC State University, Raleigh, North Carolina 27695, United States
| | - You-Chen Lin
- Department of Chemistry and Comparative Medicine Institute, NC State University, Raleigh, North Carolina 27695, United States
| | - Joshua G. Pierce
- Department of Chemistry and Comparative Medicine Institute, NC State University, Raleigh, North Carolina 27695, United States
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Hu N, White LV, Lan P, Banwell MG. The Chemical Synthesis of the Crinine and Haemanthamine Alkaloids: Biologically Active and Enantiomerically-Related Systems that Serve as Vehicles for Showcasing New Methodologies for Molecular Assembly. Molecules 2021; 26:molecules26030765. [PMID: 33540725 PMCID: PMC7867252 DOI: 10.3390/molecules26030765] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Revised: 01/14/2021] [Accepted: 01/15/2021] [Indexed: 11/16/2022] Open
Abstract
The title alkaloids, often referred to collectively as crinines, are a prominent group of structurally distinct natural products with additional members being reported on a regular basis. As such, and because of their often notable biological properties, they have attracted attention as synthetic targets since the mid-1950s. Such efforts continue unabated and more recent studies on these alkaloids have focused on using them as vehicles for showcasing the utility of new synthetic methods. This review provides a comprehensive survey of the nearly seventy-year history of these synthetic endeavors.
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