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Zhu J, Wang T, An D, Zhang R, Gu Y, Zhou G, Lu X, Liu Y. Facile Synthesis of Donor-Acceptor Heterocycloarenes Based on Pyrazine Derivatives Possessing Intriguing Iodide Ion Capture Properties. J Am Chem Soc 2024; 146:21922-21931. [PMID: 39052980 DOI: 10.1021/jacs.4c06879] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/27/2024]
Abstract
Donor-acceptor (D-A) conjugated systems have been extensively investigated and play important roles in organic electronics. Incorporating D-A structures into (hetero)cycloarenes endows them tunable electronic properties, while the well-defined cavity remains. However, the synthetic complexity of introducing electron-acceptor moieties into (hetero)cycloarenes limits their development and applications. In this paper, the first family of electronically tunable D-A heterocycloarenes (DAHCn, n = 1-5) based on pyrazine derivatives was facilely synthesized through cyclocondensation reaction from a tetraketone-functionalized heterocycloarene precursor prepared using the ketal-protection strategy. The effect of expanded conjugation and the inserted electron-withdrawing group on the electronic structures of the D-A heterocycloarenes was studied systematically by X-ray crystallographic analysis, various spectroscopic measurements, and theoretical calculations. Interestingly, the presence of an electron-withdrawing group polarizes the inner C(sp2)-H and significantly increases the binding affinities of D-A heterocycloarenes to the iodide anion. Meanwhile, the anion affinity can be further modulated by the type of attached substituents and the distance of polarization. More importantly, the dicyanopyrazine derivative DAHC3 shows the highest binding strength to the iodide ion as a 2:1 sandwich complex (log β2 = 12.3 and ΔG = -69.1 kJ mol-1), which is the strongest iodide receptor using C(sp2)-H hydrogen bonding interactions reported to date. Our finding provides a new strategy to design and synthesize D-A heterocycloarenes and strong anion receptors.
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Affiliation(s)
- Jiangyu Zhu
- Department of Materials Science, State Key Laboratory of Molecular Engineering of Polymers, Fudan University, Shanghai 200438, China
| | - Teng Wang
- Department of Materials Science, State Key Laboratory of Molecular Engineering of Polymers, Fudan University, Shanghai 200438, China
| | - Dongyue An
- Department of Materials Science, State Key Laboratory of Molecular Engineering of Polymers, Fudan University, Shanghai 200438, China
| | - Rong Zhang
- Department of Materials Science, State Key Laboratory of Molecular Engineering of Polymers, Fudan University, Shanghai 200438, China
| | - Yuanhe Gu
- Department of Materials Science, State Key Laboratory of Molecular Engineering of Polymers, Fudan University, Shanghai 200438, China
| | - Gang Zhou
- Lab of Advanced Materials, State Key Laboratory of Molecular Engineering of Polymers, Fudan University, Shanghai 200438, China
| | - Xuefeng Lu
- Department of Materials Science, State Key Laboratory of Molecular Engineering of Polymers, Fudan University, Shanghai 200438, China
| | - Yunqi Liu
- Department of Materials Science, Fudan University, Shanghai 200438, China
- Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
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2
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Hu H, Xia L, Li G, Chen Y. Recent progress of porous cage materials in sample preparation, chromatographic separation, and detection. J Sep Sci 2024; 47:e2400415. [PMID: 39118576 DOI: 10.1002/jssc.202400415] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2024] [Revised: 07/15/2024] [Accepted: 07/24/2024] [Indexed: 08/10/2024]
Abstract
Porous cage materials with certain dimensions, sizes, shapes, and functions have been regarded as promising materials for sample preparation, chromatographic separation, and detection process. In contrast to infinite frameworks such as metal-organic frameworks or covalent organic frameworks, porous cage materials are constructed from discrete molecules containing at least one internal cavity. The well-defined cavities in porous cage materials provide opportunities for non-covalent interactions. These interactions can be programmed into the ligand design or supramolecular cage constructing using the cages as building blocks, offering various host-guest recognition with great selectivity. In this review, we desire to elucidate the fundamental principles governing the design and fabrication of porous cage materials with well-defined cavities, good solvent processability, and modifiable groups, the applications of these porous cage materials in sample preparation, chromatographic separation, and detection were discussed. The recent advantages of porous cage materials for the analysis process were summarized. We state the potential of these materials and provide an outlook for further application strategies. We expect that this review can inspire interest in the porous cage materials research area for analysis.
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Affiliation(s)
- Hongzhi Hu
- School of Chemistry, Sun Yat-sen University, Guangzhou, China
| | - Ling Xia
- School of Chemistry, Sun Yat-sen University, Guangzhou, China
| | - Gongke Li
- School of Chemistry, Sun Yat-sen University, Guangzhou, China
| | - Yi Chen
- National & Local Joint Engineering Research Center for Mineral Salt Deep Utilization, Huaiyin Institute of Technology, Huaian, China
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3
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Montà-González G, Ortiz-Gómez E, López-Lima R, Fiorini G, Martínez-Máñez R, Martí-Centelles V. Water-Soluble Molecular Cages for Biological Applications. Molecules 2024; 29:1621. [PMID: 38611902 PMCID: PMC11013847 DOI: 10.3390/molecules29071621] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2024] [Revised: 04/01/2024] [Accepted: 04/02/2024] [Indexed: 04/14/2024] Open
Abstract
The field of molecular cages has attracted increasing interest in relation to the development of biological applications, as evidenced by the remarkable examples published in recent years. Two key factors have contributed to this achievement: First, the remarkable and adjustable host-guest chemical properties of molecular cages make them highly suitable for biological applications. This allows encapsulating therapeutic molecules to improve their properties. Second, significant advances have been made in synthetic methods to create water-soluble molecular cages. Achieving the necessary water solubility is a significant challenge, which in most cases requires specific chemical groups to overcome the inherent hydrophobic nature of the molecular cages which feature the organic components of the cage. This can be achieved by either incorporating water-solubilizing groups with negative/positive charges, polyethylene glycol chains, etc.; or by introducing charges directly into the cage structure itself. These synthetic strategies allow preparing water-soluble molecular cages for diverse biological applications, including cages' anticancer activity, anticancer drug delivery, photodynamic therapy, and molecular recognition of biological molecules. In the review we describe selected examples that show the main concepts to achieve water solubility in molecular cages and some selected recent biological applications.
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Affiliation(s)
- Giovanni Montà-González
- Instituto Interuniversitario de Investigación de Reconocimiento Molecular y Desarrollo Tecnológico (IDM), Universitat Politècnica de València, Universitat de València, Camino de Vera s/n, 46022 Valencia, Spain; (G.M.-G.); (E.O.-G.); (G.F.)
- Departamento de Química, Universitat Politècnica de València, Camí de Vera s/n, 46022 Valencia, Spain
| | - Eduardo Ortiz-Gómez
- Instituto Interuniversitario de Investigación de Reconocimiento Molecular y Desarrollo Tecnológico (IDM), Universitat Politècnica de València, Universitat de València, Camino de Vera s/n, 46022 Valencia, Spain; (G.M.-G.); (E.O.-G.); (G.F.)
- Departamento de Química, Universitat Politècnica de València, Camí de Vera s/n, 46022 Valencia, Spain
| | - Rocío López-Lima
- Instituto Interuniversitario de Investigación de Reconocimiento Molecular y Desarrollo Tecnológico (IDM), Universitat Politècnica de València, Universitat de València, Camino de Vera s/n, 46022 Valencia, Spain; (G.M.-G.); (E.O.-G.); (G.F.)
| | - Guillermo Fiorini
- Instituto Interuniversitario de Investigación de Reconocimiento Molecular y Desarrollo Tecnológico (IDM), Universitat Politècnica de València, Universitat de València, Camino de Vera s/n, 46022 Valencia, Spain; (G.M.-G.); (E.O.-G.); (G.F.)
| | - Ramón Martínez-Máñez
- Instituto Interuniversitario de Investigación de Reconocimiento Molecular y Desarrollo Tecnológico (IDM), Universitat Politècnica de València, Universitat de València, Camino de Vera s/n, 46022 Valencia, Spain; (G.M.-G.); (E.O.-G.); (G.F.)
- Departamento de Química, Universitat Politècnica de València, Camí de Vera s/n, 46022 Valencia, Spain
- CIBER de Bioingeniería Biomateriales y Nanomedicina, Instituto de Salud Carlos III, 46022 Valencia, Spain
- Unidad Mixta de Investigación en Nanomedicina y Sensores, Instituto de Investigación Sanitaria La Fe (IISLAFE), Universitat Politècnica de València, Avenida Fernando Abril Martorell, 106, 46026 Valencia, Spain
- Unidad Mixta UPV-CIPF de Investigación en Mecanismos de Enfermedades y Nanomedicina, Centro de Investigación Príncipe Felipe, Universitat Politècnica de València, Avenida Eduardo Primo Yúfera, 3, 46012 Valencia, Spain
| | - Vicente Martí-Centelles
- Instituto Interuniversitario de Investigación de Reconocimiento Molecular y Desarrollo Tecnológico (IDM), Universitat Politècnica de València, Universitat de València, Camino de Vera s/n, 46022 Valencia, Spain; (G.M.-G.); (E.O.-G.); (G.F.)
- Departamento de Química, Universitat Politècnica de València, Camí de Vera s/n, 46022 Valencia, Spain
- CIBER de Bioingeniería Biomateriales y Nanomedicina, Instituto de Salud Carlos III, 46022 Valencia, Spain
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Liu SN, Ren QX, Ding YT, Cao XP, Shi ZF, Chow HF, Kuck D. A Molecular Cage Accessed by Threefold Click Reaction of a C3v-Symmetric Triazido-Functionalized Tribenzotriquinacene. J Org Chem 2024; 89:2127-2137. [PMID: 38270538 DOI: 10.1021/acs.joc.3c01349] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2024]
Abstract
The hitherto unknown hexakis(halomethyl)-functionalized tribenzotriquinacenes (TBTQs) 9 and 10 were synthesized from the key 4b,8b,12b-tribromo-TBTQ derivative 6 by an improved route in 67% overall yield. Extension of the bowl-shaped framework of 9 or 10 by threefold condensation with propargylamine or 2-azidoethylamine afforded the corresponding TBTQ-trialkyne 11 and TBTQ-triazide 12, respectively. While attempts to construct bis-TBTQ cages, including homodimerization of 11 and heterocoupling of 11 with 12, were unsuccessful, triazide 12 was found to undergo threefold [3 + 2]-cycloaddition with 3-ethynylaniline and phloroglucinol tripropargyl ether under click chemistry conditions. The latter reaction enabled facile capping of the TBTQ bowl to give the novel cage compound 5 in 22% yield.
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Affiliation(s)
- Shuai-Nan Liu
- State Key Laboratory of Applied Organic Chemistry and College of Chemistry & Chemical Engineering, Lanzhou University, Lanzhou 730000, P. R. China
| | - Qing-Xia Ren
- State Key Laboratory of Applied Organic Chemistry and College of Chemistry & Chemical Engineering, Lanzhou University, Lanzhou 730000, P. R. China
| | - Yun-Tao Ding
- State Key Laboratory of Applied Organic Chemistry and College of Chemistry & Chemical Engineering, Lanzhou University, Lanzhou 730000, P. R. China
| | - Xiao-Ping Cao
- State Key Laboratory of Applied Organic Chemistry and College of Chemistry & Chemical Engineering, Lanzhou University, Lanzhou 730000, P. R. China
| | - Zi-Fa Shi
- State Key Laboratory of Applied Organic Chemistry and College of Chemistry & Chemical Engineering, Lanzhou University, Lanzhou 730000, P. R. China
| | - Hak-Fun Chow
- Department of Chemistry, The Chinese University of Hong Kong, Shatin, NT 999077, Hong Kong
| | - Dietmar Kuck
- Department of Chemistry and Center for Molecular Materials (CM2), Bielefeld University, 33615 Bielefeld, Germany
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5
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Bhattacharjee N, Gao X, Nathani A, Dobscha JR, Pink M, Ito T, Flood AH. Solvent Acts as the Referee in a Match-Up Between Charged and Preorganized Receptors. Chemistry 2023; 29:e202302339. [PMID: 37615829 DOI: 10.1002/chem.202302339] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2023] [Revised: 08/21/2023] [Accepted: 08/22/2023] [Indexed: 08/25/2023]
Abstract
The prevalence of anion-cation contacts in biomolecular recognition under aqueous conditions suggests that ionic interactions should dominate the binding of anions in solvents across both high and low polarities. Investigations of this idea using titrations in low polarity solvents are impaired by interferences from ion pairing that prevent a clear picture of binding. To address this limitation and test the impact of ion-ion interactions across multiple solvents, we quantified chloride binding to a cationic receptor after accounting for ion pairing. In these studies, we created a chelate receptor using aryl-triazole CH donors and a quinolinium unit that directs its cationic methyl inside the binding pocket. In low-polarity dichloromethane, the 1 : 1 complex (log K1 : 1 ~ 7.3) is more stable than neutral chelates, but fortuitously comparable to a preorganized macrocycle (log K1 : 1 ~ 6.9). Polar acetonitrile and DMSO diminish stabilities of the charged receptor (log K1 : 1 ~ 3.7 and 1.9) but surprisingly 100-fold more than the macrocycle. While both receptors lose stability by dielectric screening of electrostatic stability, the cationic receptor also pays additional costs of organization. Thus even though the charged receptor has stronger binding in apolar solvents, the uncharged receptor has more anion affinity in polar solvents.
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Affiliation(s)
- Nabarupa Bhattacharjee
- Department of Chemistry, Indiana University Bloomington, 800 E. Kirkwood Ave., Bloomington, IN, 47405, USA
| | - Xinfeng Gao
- Department of Chemistry, Indiana University Bloomington, 800 E. Kirkwood Ave., Bloomington, IN, 47405, USA
| | - Akash Nathani
- Department of Chemistry, Kansas State University, 213 CBC Building, 1212 Mid-campus Dr North, Manhattan, KS 66506, USA
| | - James R Dobscha
- Department of Chemistry, Indiana University Bloomington, 800 E. Kirkwood Ave., Bloomington, IN, 47405, USA
| | - Maren Pink
- Department of Chemistry, Indiana University Bloomington, 800 E. Kirkwood Ave., Bloomington, IN, 47405, USA
| | - Takashi Ito
- Department of Chemistry, Kansas State University, 213 CBC Building, 1212 Mid-campus Dr North, Manhattan, KS 66506, USA
| | - Amar H Flood
- Department of Chemistry, Indiana University Bloomington, 800 E. Kirkwood Ave., Bloomington, IN, 47405, USA
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6
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Wang YF, Wang SM, Zhang X, Nian H, Zheng LS, Wang X, Schreckenbach G, Jiang W, Yang LP, Wang LL. Precise Recognition in Water by an Endo-Functionalized Cavity: Tuning the Complementarity of Binding Sites. Angew Chem Int Ed Engl 2023; 62:e202310115. [PMID: 37814589 DOI: 10.1002/anie.202310115] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2023] [Revised: 10/08/2023] [Accepted: 10/09/2023] [Indexed: 10/11/2023]
Abstract
Precise binding towards structurally similar substrates is a common feature of biomolecular recognition. However, achieving such selectivity-especially in distinguishing subtle differences in substrates-with synthetic hosts can be quite challenging. Herein, we report a novel design strategy involving the combination of different rigid skeletons to adjust the distance between recognition sites within the cavity, which allows for the highly selective recognition of hydrogen-bonding complementary substrates, such as 4-chromanone. X-ray single-crystal structures and density functional theory calculations confirmed that the distance of endo-functionalized groups within the rigid cavity is crucial for achieving high binding selectivity through hydrogen bonding. The thermodynamic data and molecular dynamics simulations revealed a significant influence of the hydrophobic cavity on the binding affinity. The new receptor possesses both high selectivity and high affinity, which provide valuable insights for the design of customized receptors.
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Affiliation(s)
- Yan-Fang Wang
- Department of Chemistry, Southern University of Science and Technology, Xueyuan Blvd 1088, Shenzhen, 518055, China
| | - Song-Meng Wang
- Department of Chemistry, Southern University of Science and Technology, Xueyuan Blvd 1088, Shenzhen, 518055, China
| | - Xiaobin Zhang
- Department of Chemistry, University of Manitoba, Winnipeg, Manitoba, R3T 2N2, Canada
| | - Hao Nian
- Department of Chemistry, Southern University of Science and Technology, Xueyuan Blvd 1088, Shenzhen, 518055, China
| | - Li-Shuo Zheng
- Department of Chemistry, Southern University of Science and Technology, Xueyuan Blvd 1088, Shenzhen, 518055, China
| | - Xiaoping Wang
- Department of Chemistry, Southern University of Science and Technology, Xueyuan Blvd 1088, Shenzhen, 518055, China
| | - Georg Schreckenbach
- Department of Chemistry, University of Manitoba, Winnipeg, Manitoba, R3T 2N2, Canada
| | - Wei Jiang
- Department of Chemistry, Southern University of Science and Technology, Xueyuan Blvd 1088, Shenzhen, 518055, China
| | - Liu-Pan Yang
- School of Pharmaceutical Science, Hengyang Medical School, University of South China, Hengyang, Hunan, 421001, China
| | - Li-Li Wang
- School of Pharmaceutical Science, Hengyang Medical School, University of South China, Hengyang, Hunan, 421001, China
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7
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Li J, Yuan L, Yang Q, Zhang N, Sun T, Bao X. A Carbazole-1,8-Disulfonamide-Derived Cryptand Receptor for Anion Recognition. J Org Chem 2023; 88:14753-14759. [PMID: 37822159 DOI: 10.1021/acs.joc.3c00949] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/13/2023]
Abstract
A novel cryptand-like anion receptor 1 was synthesized in reasonable yield by a one-step condensation reaction. The UV-vis spectroscopic titrations indicated that cryptand 1 bound AcO- in preference to other monovalent anions (including its competing F- and H2PO4-) in CH3CN, generating a 1:1 binding complex with Ka = 51,000 M-1. Moreover, the crystal structures revealed that the acetate ion was encapsulated inside the cryptand's cavity in a 1:1 manner, through multiple N-H···O hydrogen bonds (although having two different crystal forms).
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Affiliation(s)
- Junhong Li
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for Research and Development of Fine Chemicals, Guizhou University, Guiyang 550025, China
| | - Lisha Yuan
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for Research and Development of Fine Chemicals, Guizhou University, Guiyang 550025, China
| | - Qinrong Yang
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for Research and Development of Fine Chemicals, Guizhou University, Guiyang 550025, China
| | - Ningjin Zhang
- Instrumental Analysis Center, Shanghai Jiaotong University, Shanghai 200240, China
| | - Tao Sun
- College of Chemistry and Chemical Engineering, Guizhou Key Laboratory of High Performance Computational Chemistry, Guizhou University, Guiyang 550025, China
| | - Xiaoping Bao
- National Key Laboratory of Green Pesticide, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Center for Research and Development of Fine Chemicals, Guizhou University, Guiyang 550025, China
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8
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Maji S, Samanta J, Samanta K, Natarajan R. Emissive Click Cages. Chemistry 2023; 29:e202301985. [PMID: 37498735 DOI: 10.1002/chem.202301985] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2023] [Revised: 07/27/2023] [Accepted: 07/27/2023] [Indexed: 07/29/2023]
Abstract
This study reports the synthesis of cofacial organic cage molecules containing aggregation-induced emissive (AIE) luminogens (AIEgens) through four-fold Cu(I)-catalyzed azide-alkyne cycloaddition (CuAAC) "click" reactions. The shorter AIEgen, tetraphenylethylene (TPE), afforded two orientational isomers (TPE-CC-1A and TPE-CC-1B). The longer AIEgen, tetrabiphenylethylene (TBPE), afforded a single isomer (TBPE-CC-2). The click reaction employed is irreversible, yet it yielded remarkable four-fold click products above 40 %. The phenyl rings around the ethylene core generate propeller-shaped chirality owing to their orientation, which influences the chirality of the resulting cages. The shorter cages are a mixture of PP/MM isomers, while the longer ones are a mixture of PM/MP isomers, as evidenced by their x-ray structures. The newly synthesized cage molecules are emissive even in dilute solutions (THF) and exhibit enhanced AIE upon the addition of water. The aggregated cage molecules in aqueous solution exhibit turn-off emission sensing of nitroaromatic explosives, with selectivity to picric acid in the 25-38 nanomolar detection range.
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Affiliation(s)
- Suman Maji
- Organic and Medicinal Chemistry Division, CSIR-Indian Institute of Chemical Biology, 4 Raja S. C. Mullick Road, Kolkata, 700032, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Jayanta Samanta
- Organic and Medicinal Chemistry Division, CSIR-Indian Institute of Chemical Biology, 4 Raja S. C. Mullick Road, Kolkata, 700032, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Krishanu Samanta
- Organic and Medicinal Chemistry Division, CSIR-Indian Institute of Chemical Biology, 4 Raja S. C. Mullick Road, Kolkata, 700032, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
| | - Ramalingam Natarajan
- Organic and Medicinal Chemistry Division, CSIR-Indian Institute of Chemical Biology, 4 Raja S. C. Mullick Road, Kolkata, 700032, India
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India
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9
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Wang ZC, Tan YZ, Tang LL, Zeng F. Binaphthyl-Based Chiral Macrocyclic Hosts for the Selective Recognition of Iodide Anions. Molecules 2023; 28:4784. [PMID: 37375339 DOI: 10.3390/molecules28124784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2023] [Revised: 06/08/2023] [Accepted: 06/14/2023] [Indexed: 06/29/2023] Open
Abstract
In this study, we explorethe synthesis of binaphthyl-based chiral macrocyclic hosts for the first time. They exhibited the selective recognition abilities of iodide anions which can be favored over those of other anions (AcO-, NO3-, ClO4-, HSO4-, Br-, PF6-, H2PO4-, BF4-, and CO3F3S-), as confirmed by UV-vis, HRMS, and 1H NMR spectroscopy experiments, as well as DFT calculations. Neutral aryl C-H···anion interactions play an important role in the formation complexes. The recognition process can be observed by the naked eye.
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Affiliation(s)
- Zong-Cheng Wang
- Department of Biology and Chemistry, Hunan Universityof Science and Engineering, Yongzhou 415199, China
| | - Ying-Zi Tan
- Department of Biology and Chemistry, Hunan Universityof Science and Engineering, Yongzhou 415199, China
| | - Lin-Li Tang
- Department of Biology and Chemistry, Hunan Universityof Science and Engineering, Yongzhou 415199, China
| | - Fei Zeng
- Department of Biology and Chemistry, Hunan Universityof Science and Engineering, Yongzhou 415199, China
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10
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Li J, Wang C, Mo Y. Selectivity Rule of Cryptands for Anions: Molecular Rigidity and Bonding Site. Chemistry 2023; 29:e202203558. [PMID: 36538660 DOI: 10.1002/chem.202203558] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2022] [Revised: 12/15/2022] [Accepted: 12/20/2022] [Indexed: 12/24/2022]
Abstract
Cryptands utilize inside CH or NH groups as hydrogen bond (H-bond) donors to capture anions such as halides. In this work, the nature and selectivity of confined hydrogen bonds inside cryptands were computationally analyzed with the energy decomposition scheme based on the block-localized wavefunction method (BLW-ED), aiming at an elucidation of governing factors in the binding between cryptands and anions. It was revealed that the intrinsic strengths of inward hydrogen bonds are dominated by the electrostatic attraction, while the anion preferences (selectivity) of inner CH and NH hydrogen bonds are governed by the Pauli exchange repulsion and electrostatic interaction, respectively. Typical conformers of cages are classified into two groups, including the C3(h) -symmetrical conformers, in which all halide anions are located near the centroids of cages, and the "semi-open" conformers, which exhibit shifted bonding sites for different halide anions. Accordingly, the difference in governing factors of selectivity is attributed to either the rigidity of cages or the binding site of anions for these two groups. In details, the C3 conformers of NH cryptands can be enlarged more remarkably than the C3(h) -symmetrical conformers of CH cryptands as the size of anion (ionic radius) increases, resulting in the relaxation of the Pauli repulsion and a dramatic reduction in electrostatic attraction, which eventually rules the selectivity of NH cryptands for halide anions. By contrary, the CH cryptands are more rigid and cannot effectively reduce the Pauli repulsion, which subsequently governs the anion preference. Unlike C3 conformers whose rigidity determines the selectivity, semi-open conformers exhibit different binding sites for different anions. From F- to I- , the bonding site shifts toward the outside end of the pocket inside the semi-open NH cryptand, leading to the significant reduction of the electrostatic interaction that dominates the anion preference. Differently, binding sites are much less affected by the size of anion inside the semi-open CH cryptand, in which the Pauli exchange repulsion remains the key factor for the selectivity of inner hydrogen bonds.
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Affiliation(s)
- Jiayao Li
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University, Xi'an, 710119, China
| | - Changwei Wang
- Key Laboratory for Macromolecular Science of Shaanxi Province, School of Chemistry & Chemical Engineering, Shaanxi Normal University, Xi'an, 710119, China
| | - Yirong Mo
- Department of Nanoscience, Joint School of Nanoscience & Nanoengineering, University of North Carolina at Greensboro, Greensboro, NC, 27401, USA
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11
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Sudan S, Chen DW, Berton C, Fadaei-Tirani F, Severin K. Synthetic Receptors with Micromolar Affinity for Chloride in Water. Angew Chem Int Ed Engl 2023; 62:e202218072. [PMID: 36628647 DOI: 10.1002/anie.202218072] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2022] [Revised: 01/09/2023] [Accepted: 01/10/2023] [Indexed: 01/12/2023]
Abstract
A water-soluble coordination cage was obtained by reaction of Pd(NO3 )2 with a 1,3-di(pyridin-3-yl)benzene ligand featuring a short PEG chain. The cavity of the metal-organic cage contains one nitrate anion, which is readily replaced by chloride. The apparent association constant for chloride binding in buffered aqueous solution is Ka =1.8(±0.1)×105 M-1 . This value is significantly higher than what has been reported for other macrocyclic chloride receptors. The heavier halides Br- and I- compete with binding or self-assembly, but the receptor displays very good selectivity over common anions such as phosphate, acetate, carbonate, and sulfate. A further increase of the chloride binding affinity by a factor of 3 was achieved using a fluorinated dipyridyl ligand.
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Affiliation(s)
- Sylvain Sudan
- Institut des Sciences et Ingénierie Chimiques, Ecole Polytechnique Fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland
| | - Damien W Chen
- Institut des Sciences et Ingénierie Chimiques, Ecole Polytechnique Fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland
| | - Cesare Berton
- Institut des Sciences et Ingénierie Chimiques, Ecole Polytechnique Fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland
| | - Farzaneh Fadaei-Tirani
- Institut des Sciences et Ingénierie Chimiques, Ecole Polytechnique Fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland
| | - Kay Severin
- Institut des Sciences et Ingénierie Chimiques, Ecole Polytechnique Fédérale de Lausanne (EPFL), 1015, Lausanne, Switzerland
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12
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Ayyar ASR, Aregawi DT, Petersen AR, Pedersen JMI, Kragh RR, Desoky MMH, Sundberg J, Vinum L, Lee JW. Carbon Dioxide-Mediated Desalination. J Am Chem Soc 2023; 145:3499-3506. [PMID: 36731027 DOI: 10.1021/jacs.2c11880] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
Conventional desalination membrane technologies, although offer portable drinking water, are still energy-intensive processes. This paper proposes a potentially new approach for performing water desalination and purification by utilizing the reversible interaction of carbon dioxide (CO2) with nucleophilic amines─reminiscent of the Solvay process. Based on our model studies with small molecules, CO2-responsive amphiphilic insoluble diamines were prepared, characterized, and applied in the formation of soda and ammonium chloride upon exposure to ambient CO2 (1 atm), thus removing chloride ions from model and real seawater. This ion-exchange process and separation of chloride from the aqueous phase are spontaneous in the presence of CO2 without the need for external energy sources. We demonstrate a flow system to envisage energy-efficient CO2-mediated desalination and simultaneous carbon capture and sequestration.
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Affiliation(s)
- Anand Sharadha-Ravi Ayyar
- Department of Chemistry, Nano-Science Centre, University of Copenhagen, Universitetsparken 5, Copenhagen Ø 2100, Denmark
| | - Desta Tesfay Aregawi
- Department of Chemistry, Nano-Science Centre, University of Copenhagen, Universitetsparken 5, Copenhagen Ø 2100, Denmark
| | - Allan R Petersen
- Department of Chemistry, Nano-Science Centre, University of Copenhagen, Universitetsparken 5, Copenhagen Ø 2100, Denmark
| | - Jonas Merlin Ibsgaard Pedersen
- Department of Chemistry, Nano-Science Centre, University of Copenhagen, Universitetsparken 5, Copenhagen Ø 2100, Denmark
| | - Rasmus Refsgaard Kragh
- Department of Chemistry, Nano-Science Centre, University of Copenhagen, Universitetsparken 5, Copenhagen Ø 2100, Denmark
| | - Mohamed M H Desoky
- Department of Chemistry, Nano-Science Centre, University of Copenhagen, Universitetsparken 5, Copenhagen Ø 2100, Denmark
| | - Jonas Sundberg
- Danish Hydrocarbon Research and Technology Centre, Technical University of Denmark, Elektrovej 375, Kgs. Lyngby 2800, Denmark
| | - Lars Vinum
- CowaTech ApS, Universitetsparken 5, Copenhagen Ø 2100, Denmark
| | - Ji-Woong Lee
- Department of Chemistry, Nano-Science Centre, University of Copenhagen, Universitetsparken 5, Copenhagen Ø 2100, Denmark.,Novo Nordisk Foundation CO2 Research Center, Gustav Wieds Vej 10, Aarhus 8000, Denmark
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13
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Alexander C, Thom JA, Kenwright AM, Christensen KE, Sørensen TJ, Faulkner S. Chelating chloride using binuclear lanthanide complexes in water. Chem Sci 2023; 14:1194-1204. [PMID: 36756316 PMCID: PMC9891377 DOI: 10.1039/d2sc05417e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2022] [Accepted: 12/27/2022] [Indexed: 12/28/2022] Open
Abstract
Halide recognition by supramolecular receptors and coordination complexes in water is a long-standing challenge. In this work, we report chloride binding in water and in competing media by pre-organised binuclear kinetically inert lanthanide complexes, bridged by flexible -(CH2)2- and -(CH2)3- spacers, forming [Ln2(DO3A)2C-2] and [Ln2(DO3A)2C-3], respectively. These hydrophilic, neutral lanthanide coordination complexes are shown to bind chloride with apparent association constants of up to 105 M-1 in water and in buffered systems. Hydroxide bridging was observed in these complexes at basic pH, which was proven to be overcome by chloride. Thus, these lanthanide complexes show promise towards chloride recognition in biology and beyond. The results described here have clearly identified a new area of anion coordination chemistry that is ripe for detailed exploration.
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Affiliation(s)
- Carlson Alexander
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford 12 Mansfield Road Oxford OX1 3TA UK
| | - James A Thom
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford 12 Mansfield Road Oxford OX1 3TA UK
| | - Alan M Kenwright
- Department of Chemistry, University of Durham South Road Durham DH1 3LE UK
| | - Kirsten E Christensen
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford 12 Mansfield Road Oxford OX1 3TA UK
| | - Thomas Just Sørensen
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford 12 Mansfield Road Oxford OX1 3TA UK
- Nano-Science Centre and Department of Chemistry, University of Copenhagen 2100 København Ø Denmark
| | - Stephen Faulkner
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford 12 Mansfield Road Oxford OX1 3TA UK
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14
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Deng Q, Gu J, Zhang H, Zhang Y, Meng X. Sustainable access to benzothiophene derivatives bearing a trifluoromethyl group via a three-component domino reaction in water. Org Biomol Chem 2022; 20:7424-7428. [PMID: 35822661 DOI: 10.1039/d2ob01034h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A catalyst-free three-component domino reaction was developed for the synthesis of benzothiophene fused pyrrolidones bearing a CF3 group for the first time. The notable advantages of this strategy over the existing methods include the use of water as a solvent at room temperature, transition metal-free conditions, a broad substrate scope, and easy scale-up synthesis. More importantly, the benzothiophene derivatives have been found to show potent anticancer activities using the Cell Counting Kit-8 (CCK-8) assay.
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Affiliation(s)
- Qingsong Deng
- Tianjin Key Laboratory of Organic Solar Cells and Photochemical Conversion, School of Chemistry & Chemical Engineering Tianjin University of Technology, Tianjin 300384, P.R. China.
| | - Jun Gu
- The Affiliated Jiangsu Shengze Hospital of Nanjing Medical University, NO.1399 Shichang West Road, Suzhou 215228, China
| | - Huan Zhang
- Tianjin Key Laboratory of Organic Solar Cells and Photochemical Conversion, School of Chemistry & Chemical Engineering Tianjin University of Technology, Tianjin 300384, P.R. China.
| | - Youlai Zhang
- Tianjin Key Laboratory of Organic Solar Cells and Photochemical Conversion, School of Chemistry & Chemical Engineering Tianjin University of Technology, Tianjin 300384, P.R. China.
| | - Xiangtai Meng
- Tianjin Key Laboratory of Organic Solar Cells and Photochemical Conversion, School of Chemistry & Chemical Engineering Tianjin University of Technology, Tianjin 300384, P.R. China.
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15
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Ma X, Liu L, Wang J, Hao Y, Xu X, Shang X. The role of hydrazine in colorimetric probes based on ferrocene derivative. Helv Chim Acta 2022. [DOI: 10.1002/hlca.202200037] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Xueyan Ma
- Xinxiang Medical University Department of Medical Chemistry CHINA
| | - Lixia Liu
- Xinxiang Medical University Department of Medical Chemistry CHINA
| | - Jia Wang
- Xinxiang Medical University Department of Medical Chemistry CHINA
| | - Yongbing Hao
- Xinxiang Medical University Department of Medical Chemistry CHINA
| | - Xiufang Xu
- Nankai University Department of Chemistry CHINA
| | - Xuefang Shang
- Xinxiang Medical University Department of chemistry Jinsui road 601Not Available 453003 Xinxiang CHINA
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16
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Chakraborty D, Mukherjee PS. Recent trends in organic cage synthesis: push towards water-soluble organic cages. Chem Commun (Camb) 2022; 58:5558-5573. [PMID: 35420101 DOI: 10.1039/d2cc01014c] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Research on organic cages has blossomed over the past few years into a mature field of study which can contribute to solving some of the challenging problems. In this review we aim to showcase the recent trends in synthesis of organic cages including a brief discussion on their use in catalysis, gas sorption, host-guest chemistry and energy transfer. Among the organic cages, water-soluble analogues are a special class of compounds which have gained renewed attention in recent times. Due to their advantage of being compatible with water, such cages have the potential of showing biomimetic activities and can find use in drug delivery and also as hosts for catalysis in aqueous medium. Hence, the synthetic strategies for the formation of water-soluble organic cages shall be discussed along with their potential applications.
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Affiliation(s)
- Debsena Chakraborty
- Department of Inorganic and Physical Chemistry, Indian Institute of Science, Bangalore-560012, India.
| | - Partha Sarathi Mukherjee
- Department of Inorganic and Physical Chemistry, Indian Institute of Science, Bangalore-560012, India.
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17
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Jiang C, Hu SJ, Zhou LP, Yang J, Sun QF. Lanthanide-organic pincer hosts with allosteric-controlled metal ion binding specificity. Chem Commun (Camb) 2022; 58:5494-5497. [PMID: 35416812 DOI: 10.1039/d2cc01379g] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A series of lanthanide-organic pincer hosts were synthesized, which showed allosteric-controlled metal ion binding selectivities due to the lanthanide-induced subtle changes of the central vacant binding site.
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Affiliation(s)
- Chen Jiang
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China. .,University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Shao-Jun Hu
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China. .,University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Li-Peng Zhou
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China.
| | - Jian Yang
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China.
| | - Qing-Fu Sun
- State Key Laboratory of Structural Chemistry, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, P. R. China. .,University of Chinese Academy of Sciences, Beijing 100049, P. R. China
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18
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Kubik S. When Molecules Meet in Water-Recent Contributions of Supramolecular Chemistry to the Understanding of Molecular Recognition Processes in Water. Chemistry 2022; 11:e202200028. [PMID: 35373466 PMCID: PMC8977507 DOI: 10.1002/open.202200028] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2022] [Revised: 03/17/2022] [Indexed: 12/19/2022]
Abstract
Molecular recognition processes in water differ from those in organic solvents in that they are mediated to a much greater extent by solvent effects. The hydrophobic effect, for example, causes molecules that only weakly interact in organic solvents to stay together in water. Such water‐mediated interactions can be very efficient as demonstrated by many of the synthetic receptors discussed in this review, some of which have substrate affinities matching or even surpassing those of natural binders. However, in spite of considerable success in designing such receptors, not all factors determining their binding properties in water are fully understood. Existing concepts still provide plausible explanations why the reorganization of water molecules often causes receptor‐substrate interactions in water to be strongly exothermic rather than entropically favored as predicted by the classical view of the hydrophobic effect.
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Affiliation(s)
- Stefan Kubik
- Technische Universität Kaiserslautern, Fachbereich Chemie - Organische Chemie, Erwin-Schrödinger-Straße 54, 67663, Kaiserslautern, Germany
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19
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Tan Y, Pan S, Zhang S, Fang L, Zhang F, Zhang Y, Jiang L. Crown‐Ether‐based Cryptands with Rarely Strong Affinities for Binding Neutral Organic Molecules. European J Org Chem 2022. [DOI: 10.1002/ejoc.202200002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Yanyan Tan
- South China Normal University school of chemistry Higher Education Mega Center of GuangzhouGuangzhou 510631 Guangzhou CHINA
| | - Shaowu Pan
- South China Normal University Chemistry CHINA
| | - Shilong Zhang
- South China Normal University school of chemistry CHINA
| | - Lin Fang
- South China Normal University Chemistry Higher Education Mega CenterGuangzhou 510631 Guangzhou CHINA
| | - Feichun Zhang
- South China Normal University School of Chemistry CHINA
| | - Yuanyuan Zhang
- South China Normal University Guangzhou Higher Education Mega Center Chemistry Department 番禺区大学城中山大学格致园1号楼4单元1102 510006 广州市 CHINA
| | - Lasheng Jiang
- South China Normal University School of Chemistry Guangzhou 510006, P. R. ChinaGuangzhou 510006 Guangzhou CHINA
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20
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Macreadie LK, Gilchrist AM, McNaughton DA, Ryder WG, Fares M, Gale PA. Progress in anion receptor chemistry. Chem 2022. [DOI: 10.1016/j.chempr.2021.10.029] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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21
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Ren H, Liu C, Ding X, Fu X, Wang H, Jiang J. High Fluorescence Porous Organic Cage for Sensing Divalent Palladium Ion and Encapsulating Fine Palladium Nanoparticles. CHINESE J CHEM 2021. [DOI: 10.1002/cjoc.202100612] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Affiliation(s)
- Huimin Ren
- Beijing Advanced Innovation Center for Materials Genome Engineering, Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials, Department of Chemistry and Chemical Engineering, School of Chemistry and Biological Engineering, University of Science and Technology Beijing Beijing 100083 China
| | - Chao Liu
- Beijing Advanced Innovation Center for Materials Genome Engineering, Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials, Department of Chemistry and Chemical Engineering, School of Chemistry and Biological Engineering, University of Science and Technology Beijing Beijing 100083 China
| | - Xu Ding
- Beijing Advanced Innovation Center for Materials Genome Engineering, Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials, Department of Chemistry and Chemical Engineering, School of Chemistry and Biological Engineering, University of Science and Technology Beijing Beijing 100083 China
| | - Xianzhang Fu
- Beijing Advanced Innovation Center for Materials Genome Engineering, Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials, Department of Chemistry and Chemical Engineering, School of Chemistry and Biological Engineering, University of Science and Technology Beijing Beijing 100083 China
| | - Hailong Wang
- Beijing Advanced Innovation Center for Materials Genome Engineering, Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials, Department of Chemistry and Chemical Engineering, School of Chemistry and Biological Engineering, University of Science and Technology Beijing Beijing 100083 China
| | - Jianzhuang Jiang
- Beijing Advanced Innovation Center for Materials Genome Engineering, Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials, Department of Chemistry and Chemical Engineering, School of Chemistry and Biological Engineering, University of Science and Technology Beijing Beijing 100083 China
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22
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Zimnicka M, Kalenius E, Jurczak J, Danikiewicz W. Ion mobility mass spectrometry - an efficient tool for the analysis of conformational switch of macrocyclic receptors upon anion binding. Analyst 2021; 146:5337-5346. [PMID: 34323262 DOI: 10.1039/d1an00958c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Interactions between anions and synthetic macrocyclic receptors belong to the extensively explored area of research due to the particularly important functions of anions in biological and environmental sciences. Structures of anion-macrocycle complexes are closely related to their function, highlighting the importance of structural analysis of the complexes. Here, we discuss the application of ion mobility mass spectrometry (IM-MS) and theoretical calculations to the structural analysis of tetralactam macrocycles (M) with varying flexibility and structural properties, and their complexes with anions [M + X]-. Collision cross section (CCS) values obtained from both direct drift tube (DT) and indirect using traveling-wave (TW) IM-MS measurements supplemented by theoretical calculations were successfully used to describe the structural properties of various macrocycle-anion complexes, proving the suitability of the IM-MS approach for sensitive, selective, and fast detection of anion complexes and characterization of their structures and conformations.
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Affiliation(s)
- Magdalena Zimnicka
- Institute of Organic Chemistry Polish Academy of Sciences, Kasprzaka 44/52, 01-224 Warsaw, Poland.
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23
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Adhikari SB, Chen A, Wang G. Synthesis of Carbohydrate Based Macrolactones and Their Applications as Receptors for Ion Recognition and Catalysis. Molecules 2021; 26:3394. [PMID: 34205128 PMCID: PMC8199946 DOI: 10.3390/molecules26113394] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Revised: 05/20/2021] [Accepted: 05/24/2021] [Indexed: 01/23/2023] Open
Abstract
Glycomacrolactones exhibit many interesting biological properties, and they are also important in molecular recognitions and for supramolecular chemistry. Therefore, it is important to be able to access glycomacrocycles with different sizes and functionality. A new series of carbohydrate-based macrocycles containing triazole and lactone moieties have been designed and synthesized. The synthesis features an intramolecular nucleophilic substitution reaction for the macrocyclization step. In this article, the effect of some common sulfonate leaving groups is evaluated for macrolactonization. Using tosylate gave good selectivity for monolactonization products with good yields. Fourteen different macrocycles have been synthesized and characterized, of which eleven macrocycles are from cyclization of the C1 to C6 positions of N-acetyl D-glucosamine derivatives and three others from C2 to C6 cyclization of functionalized D-glucosamine derivatives. These novel macrolactones have unique structures and demonstrate interesting anion binding properties, especially for chloride. The macrocycles containing two triazoles form complexes with copper sulfate, and they are effective ligands for copper sulfate mediated azide-alkyne cycloaddition reactions (CuAAC). In addition, several macrocycles show some selectivity for different alkynes.
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Affiliation(s)
| | | | - Guijun Wang
- Department of Chemistry and Biochemistry, Old Dominion University, Norfolk, VA 23529, USA; (S.B.A.); (A.C.)
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24
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Liu Y, Parks FC, Sheetz EG, Chen CH, Flood AH. Polarity-Tolerant Chloride Binding in Foldamer Capsules by Programmed Solvent-Exclusion. J Am Chem Soc 2021; 143:3191-3204. [PMID: 33596052 DOI: 10.1021/jacs.0c12562] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Persistent anion binding in a wide range of solution environments is a key challenge that continues to motivate and demand new strategies in synthetic receptor design. Though strong binding in low-polarity solvents has become routine, our ability to maintain high affinities in high-polarity solvents has not yet reached the standard set by nature. Anions are bound and transported regularly in aqueous environments by proteins that use secondary and tertiary structure to isolate anion binding sites from water. Inspired by this principle of solvent exclusion, we created a sequence-defined foldameric capsule whose global minimum conformation displays a helical folded state and is preorganized for 1:1 anion complexation. The high stability of the folded geometry and its ability to exclude solvent were supported by solid-state and solution phase studies. This capsule then withstood a 4-fold increase in solvent dielectric constant (εr) from dichloromethane (9) to acetonitrile (36) while maintaining a high and solvent-independent affinity of 105 M-1; ΔG ∼ 28 kJ mol-1. This behavior is unusual. More typical of solvent-dependent behavior, Cl- affinities were seen to plummet in control compounds, such as aryl-triazole macrocycles and pentads, with their solvent-exposed binding cavities susceptible to dielectric screening. Finally, dimethyl sulfoxide denatures the foldamer by putative solvent binding, which then lowers the foldamer's Cl- affinity to normal levels. The design of this capsule demonstrates a new prototype for the development of potent receptors that can operate in polar solvents and has the potential to help manage hydrophilic anions present in the hydrosphere and biosphere.
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Affiliation(s)
- Yun Liu
- Department of Chemistry, Indiana University 800 E. Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Fred C Parks
- Department of Chemistry, Indiana University 800 E. Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Edward G Sheetz
- Department of Chemistry, Indiana University 800 E. Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Chun-Hsing Chen
- Department of Chemistry, Indiana University 800 E. Kirkwood Avenue, Bloomington, Indiana 47405, United States
| | - Amar H Flood
- Department of Chemistry, Indiana University 800 E. Kirkwood Avenue, Bloomington, Indiana 47405, United States
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25
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Orenha RP, da Silva VB, Caramori GF, de Souza Schneider FS, Piotrowski MJ, Contreras-Garcia J, Cardenas C, Briese Gonçalves M, Mendizabal F, Parreira RLT. On the recognition of chloride, bromide and nitrate anions by anthracene–squaramide conjugated compounds: a computational perspective. NEW J CHEM 2020. [DOI: 10.1039/d0nj03685d] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Abstract
Anionic recognition appears in several biological processes. Here, the interaction between anthracene–squaramide conjugated compounds and Cl−, Br− and NO3− anions has been explored using density functional theory (DFT) calculations.
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Affiliation(s)
- Renato Pereira Orenha
- Núcleo de Pesquisas em Ciências Exatas e Tecnológicas
- Universidade de Franca
- Franca
- Brazil
| | | | - Giovanni Finoto Caramori
- Departamento de Química
- Universidade Federal de Santa Catarina
- Campus Universitário Trindade
- Florianópolis
- Brazil
| | | | | | | | - Carlos Cardenas
- Departamento de Física
- Facultad de Ciencias
- Universidad de Chile
- Santiago
- Chile
| | - Marina Briese Gonçalves
- Departamento de Química
- Universidade Federal de Santa Catarina
- Campus Universitário Trindade
- Florianópolis
- Brazil
| | - Fernando Mendizabal
- Universidad de Chile
- Departamento de Química
- Facultad de Ciências
- Santiago
- Chile
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