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Jamey N, Ferrié L. Stereodivergent Total Synthesis of Ethyl Plakortide Z. Org Lett 2024; 26:5741-5745. [PMID: 38935933 DOI: 10.1021/acs.orglett.4c01893] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/29/2024]
Abstract
Plakortides make up a subclass of marine endoperoxides with diverse biological activities. Their structural particularity is derived from the C4 and C6 positions of the endoperoxide, which are substituted by ethyl groups. The ethyl plakortide Z has the simplest side chain among its congeners and is an excellent target for testing a universal strategy for the synthesis of this subfamily. Accordingly, we have synthesized for the first time a six-membered pla-kortide using asymmetric Enders alkylation, regioselective cyclobutanol oxidative expansion, and peroxycarbenium ion-mediated diastereoselective C-C bond formation as key steps. Preparative HPLC separation of the various diastereomers yielded a pure sample of synthetic ethyl plakortide Z, constituting the first total synthesis. Despite the lack of selectivity inherent in the synthesis of peroxide linkages involving radical reactions, the diastereomer separation step was offset by an efficient synthesis in just 11 steps and 4.2% overall yield.
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Affiliation(s)
- Nicolas Jamey
- BioCIS, Faculté de Pharmacie, Université Paris-Saclay, CNRS, 91400 Orsay France
| | - Laurent Ferrié
- BioCIS, Faculté de Pharmacie, Université Paris-Saclay, CNRS, 91400 Orsay France
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2
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Elloumi A, Mas-Normand L, Bride J, Reversat G, Bultel-Poncé V, Guy A, Oger C, Demion M, Le Guennec JY, Durand T, Vigor C, Sánchez-Illana Á, Galano JM. From MS/MS library implementation to molecular networks: Exploring oxylipin diversity with NEO-MSMS. Sci Data 2024; 11:193. [PMID: 38351090 PMCID: PMC10864323 DOI: 10.1038/s41597-024-03034-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Accepted: 01/31/2024] [Indexed: 02/16/2024] Open
Abstract
Oxylipins, small polar molecules derived from the peroxidation of polyunsaturated fatty acids (PUFAs), serve as biomarkers for many diseases and play crucial roles in human physiology and inflammation. Despite their significance, many non-enzymatic oxygenated metabolites of PUFAs (NEO-PUFAs) remain poorly reported, resulting in a lack of public datasets of experimental data and limiting their dereplication in further studies. To overcome this limitation, we constructed a high-resolution tandem mass spectrometry (MS/MS) dataset comprising pure NEO-PUFAs (both commercial and self-synthesized) and in vitro free radical-induced oxidation of diverse PUFAs. By employing molecular networking techniques with this dataset and the existent ones in public repositories, we successfully mapped a wide range of NEO-PUFAs, expanding the strategies for annotating oxylipins, and NEO-PUFAs and offering a novel workflow for profiling these molecules in biological samples.
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Affiliation(s)
- Anis Elloumi
- Institut des Biomolécules Max Mousseron (IBMM), UMR 5247-CNRS, 34293, Montpellier, France
| | - Lindsay Mas-Normand
- Institut des Biomolécules Max Mousseron (IBMM), UMR 5247-CNRS, 34293, Montpellier, France
| | - Jamie Bride
- PhyMedExp, Université de Montpellier, Inserm U1046, UMR CNRS 9412, Montpellier, France
| | - Guillaume Reversat
- Institut des Biomolécules Max Mousseron (IBMM), UMR 5247-CNRS, 34293, Montpellier, France
| | - Valérie Bultel-Poncé
- Institut des Biomolécules Max Mousseron (IBMM), UMR 5247-CNRS, 34293, Montpellier, France
| | - Alexandre Guy
- Institut des Biomolécules Max Mousseron (IBMM), UMR 5247-CNRS, 34293, Montpellier, France
| | - Camille Oger
- Institut des Biomolécules Max Mousseron (IBMM), UMR 5247-CNRS, 34293, Montpellier, France
| | - Marie Demion
- PhyMedExp, Université de Montpellier, Inserm U1046, UMR CNRS 9412, Montpellier, France
| | - Jean-Yves Le Guennec
- PhyMedExp, Université de Montpellier, Inserm U1046, UMR CNRS 9412, Montpellier, France
| | - Thierry Durand
- Institut des Biomolécules Max Mousseron (IBMM), UMR 5247-CNRS, 34293, Montpellier, France
| | - Claire Vigor
- Institut des Biomolécules Max Mousseron (IBMM), UMR 5247-CNRS, 34293, Montpellier, France
| | - Ángel Sánchez-Illana
- Institut des Biomolécules Max Mousseron (IBMM), UMR 5247-CNRS, 34293, Montpellier, France.
- Department of Analytical Chemistry, University of Valencia, Dr. Moliner 50, 46100, Burjassot, Spain.
| | - Jean-Marie Galano
- Institut des Biomolécules Max Mousseron (IBMM), UMR 5247-CNRS, 34293, Montpellier, France.
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Kerim MD, Evanno L, Ferrié L. Stereodivergent Total Syntheses of (+)-Mycaperoxides C, D, G Methyl Ester and (-)-Mycaperoxide B. Chemistry 2023; 29:e202203004. [PMID: 36305658 PMCID: PMC10107902 DOI: 10.1002/chem.202203004] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2022] [Indexed: 11/07/2022]
Abstract
Mycaperoxides are natural endoperoxides isolated from different Mycale genus sponges, showing significant antiviral or antibacterial activities. We report herein the first total syntheses of representative congeners of this family from sclareol using a stereodivergent approach. Thus, an innovative oxidative ring expansion of cyclobutanol was used to bring the 1,2-dioxane subunit, and a Mukaiyama aldol reaction on peroxycarbenium species was utilized to install the propionic acid subunit. During the study toward (+)-mycaperoxide D methyl ester (2), the isolation of the eight possible diastereomers under their ethyl thioester form allowed to build a pertinent database for further NMR assignment studies. Thus, we completed the total syntheses of (+)-mycaperoxides D, C, G methyl ester, and (-)-mycaperoxide B in 11 to 15 steps, confirming their original assignment.
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Affiliation(s)
- Mansour D Kerim
- BioCIS, CNRS, Université Paris-Saclay, Bâtiment Henri-Moissan, 17 avenue des Sciences, 91400, Orsay, France
| | - Laurent Evanno
- BioCIS, CNRS, Université Paris-Saclay, Bâtiment Henri-Moissan, 17 avenue des Sciences, 91400, Orsay, France
| | - Laurent Ferrié
- BioCIS, CNRS, Université Paris-Saclay, Bâtiment Henri-Moissan, 17 avenue des Sciences, 91400, Orsay, France
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4
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Yaremenko IA, Radulov PS, Belyakova YY, Fomenkov DI, Tsogoeva SB, Terent’ev AO. Lewis Acids and Heteropoly Acids in the Synthesis of Organic Peroxides. Pharmaceuticals (Basel) 2022; 15:ph15040472. [PMID: 35455469 PMCID: PMC9025639 DOI: 10.3390/ph15040472] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2022] [Revised: 04/08/2022] [Accepted: 04/09/2022] [Indexed: 12/04/2022] Open
Abstract
Organic peroxides are an important class of compounds for organic synthesis, pharmacological chemistry, materials science, and the polymer industry. Here, for the first time, we summarize the main achievements in the synthesis of organic peroxides by the action of Lewis acids and heteropoly acids. This review consists of three parts: (1) metal-based Lewis acids in the synthesis of organic peroxides; (2) the synthesis of organic peroxides promoted by non-metal-based Lewis acids; and (3) the application of heteropoly acids in the synthesis of organic peroxides. The information covered in this review will be useful for specialists in the field of organic synthesis, reactions and processes of oxygen-containing compounds, catalysis, pharmaceuticals, and materials engineering.
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Affiliation(s)
- Ivan A. Yaremenko
- N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, 47 Leninsky Prosp., 119991 Moscow, Russia; (P.S.R.); (Y.Y.B.); (D.I.F.)
- Correspondence: (I.A.Y.); (A.O.T.)
| | - Peter S. Radulov
- N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, 47 Leninsky Prosp., 119991 Moscow, Russia; (P.S.R.); (Y.Y.B.); (D.I.F.)
| | - Yulia Yu. Belyakova
- N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, 47 Leninsky Prosp., 119991 Moscow, Russia; (P.S.R.); (Y.Y.B.); (D.I.F.)
| | - Dmitriy I. Fomenkov
- N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, 47 Leninsky Prosp., 119991 Moscow, Russia; (P.S.R.); (Y.Y.B.); (D.I.F.)
| | - Svetlana B. Tsogoeva
- Organic Chemistry Chair I and Interdisciplinary Center for Molecular Materials (ICMM), Friedrich-Alexander University of Erlangen–Nürnberg, Nikolaus Fiebiger-Straße 10, 91058 Erlangen, Germany;
| | - Alexander O. Terent’ev
- N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, 47 Leninsky Prosp., 119991 Moscow, Russia; (P.S.R.); (Y.Y.B.); (D.I.F.)
- Correspondence: (I.A.Y.); (A.O.T.)
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Ferrié L, Jamey N. From Ring-Expansion to Ring-Contraction: Synthesis of γ-Lactones from Cyclobutanols and Relative Stability of Five- and Six-Membered Endoperoxides toward Organic Bases. SYNTHESIS-STUTTGART 2022. [DOI: 10.1055/a-1765-1615] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Abstract
AbstractCyclobutanols undergo ring expansion with molecular oxygen in the presence of Co(acac)2 to afford 1,2-dioxane-hemiperoxyketals. In the course of acylation, we observed that endoperoxides rearranged into γ-lactone in the presence of triethylamine. Thus, a generalization of this ring contraction through a Kornblum–DeLaMare rearrangement is here reported. Application of this transformation to monosubstituted 1,2-dioxane derivatives also led to 1,4-ketoaldehydes, in proportions depending on the nature of the substituent. These same conditions applied to five-membered dioxolane analogues led to fragmentation instead, through a retro-aldol type process. This study emphasizes the difference of stability of 1,2-dioxane and 1,2-dioxolane against organic bases, 1,2-dioxolanes having proved to be particularly reactive whereas 1,2-dioxanes showed a relative tolerance under these conditions.
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Pinet A, Cojean S, Nguyen LT, Vásquez-Ocmín P, Maciuk A, Loiseau PM, Le Pape P, Figadère B, Ferrié L. Anti-protozoal and anti-fungal evaluation of 3,5-disubstituted 1,2-dioxolanes. Bioorg Med Chem Lett 2021; 47:128196. [PMID: 34116159 DOI: 10.1016/j.bmcl.2021.128196] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2021] [Revised: 05/28/2021] [Accepted: 06/06/2021] [Indexed: 11/16/2022]
Abstract
Endoperoxides are a class of compounds, which is well-known for their antimalarial properties, but few reports exist about 3,5-disubstituted 1,2-dioxolanes. After having designed a new synthetic route for the preparation of these substances, they were evaluated against 4 different agents of infectious diseases, protozoa (Plasmodium and Leishmania) and Fungi (Candida and Aspergillus). Whereas moderate antifungal activity was found for our products, potent antimalarial and antileishmanial activities were observed for a few compounds. The nature of the substituents linked to the endoperoxide ring seems to play an important role in the bioactivities.
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Affiliation(s)
- Alexis Pinet
- BioCIS, CNRS, Université Paris-Saclay, Châtenay-Malabry 92290, France
| | - Sandrine Cojean
- BioCIS, CNRS, Université Paris-Saclay, Châtenay-Malabry 92290, France; National de Référence du Paludisme, Hôpital Bichat-Claude Bernard, APHP, 75018 Paris, France
| | - Linh Thuy Nguyen
- BioCIS, CNRS, Université Paris-Saclay, Châtenay-Malabry 92290, France; Institute of Marine Biochemistry (IMBC), Vietnam Academy of Science and Technology (VAST), Cau Giay, Hanoi, Viet Nam
| | | | - Alexandre Maciuk
- BioCIS, CNRS, Université Paris-Saclay, Châtenay-Malabry 92290, France
| | | | - Patrice Le Pape
- Department of Parasitology and Medical Mycology University of Nantes, EA1155 IICiMed, Nantes Atlantique Universities, Faculty of Pharmacy, Nantes, France
| | - Bruno Figadère
- BioCIS, CNRS, Université Paris-Saclay, Châtenay-Malabry 92290, France
| | - Laurent Ferrié
- BioCIS, CNRS, Université Paris-Saclay, Châtenay-Malabry 92290, France.
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7
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López MM, Jamey N, Pinet A, Figadère B, Ferrié L. Oxidative Ring Expansion of Cyclobutanols: Access to Functionalized 1,2-Dioxanes. Org Lett 2021; 23:1626-1631. [DOI: 10.1021/acs.orglett.1c00070] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Affiliation(s)
| | - Nicolas Jamey
- BioCIS, CNRS, Université Paris-Saclay, Châtenay-Malabry 92290, France
| | - Alexis Pinet
- BioCIS, CNRS, Université Paris-Saclay, Châtenay-Malabry 92290, France
| | - Bruno Figadère
- BioCIS, CNRS, Université Paris-Saclay, Châtenay-Malabry 92290, France
| | - Laurent Ferrié
- BioCIS, CNRS, Université Paris-Saclay, Châtenay-Malabry 92290, France
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8
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Feng H, Zhao Y, Liu P, Hu L. Sc(OTf) 3-Catalyzed C-C Bond-Forming Reaction of Cyclic Peroxy Ketals for the Synthesis of Highly Functionalized 1,2-Dioxene Endoperoxides. Org Lett 2021; 23:1632-1637. [PMID: 33591195 DOI: 10.1021/acs.orglett.1c00056] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
A new and general Sc(OTf)3-catalyzed C-C bond-forming reaction of 3-(2-methoxyethoxy)-endoperoxy ketals with silyl ketene acetals, silyl enol ethers, allyltrimethylsilane, and trimethylsilyl cyanide has been developed via the reactive peroxycarbenium ions, affording a wide range of complicated 3,3,6,6-tetrasubstituted 1,2-dioxenes bearing adjacent quaternary carbons and 3-acetyl/allyl/cyano functional groups in good yields at room temperature. Notably, the resultant 1,2-dioxenes are structurally stable, which can be facially transformed into another important 1,2-dioxane endoperoxide under conventional hydrogenation conditions without deconstructing the weak O-O bond.
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Affiliation(s)
- Haowei Feng
- Chongqing Key Laboratory of Natural Product Synthesis and Drug Research, School of Pharmaceutical Sciences, Chongqing University, Chongqing 401331, P. R. China
| | - Yukun Zhao
- Chongqing Key Laboratory of Natural Product Synthesis and Drug Research, School of Pharmaceutical Sciences, Chongqing University, Chongqing 401331, P. R. China
| | - Pengkang Liu
- Chongqing Key Laboratory of Natural Product Synthesis and Drug Research, School of Pharmaceutical Sciences, Chongqing University, Chongqing 401331, P. R. China
| | - Lin Hu
- Chongqing Key Laboratory of Natural Product Synthesis and Drug Research, School of Pharmaceutical Sciences, Chongqing University, Chongqing 401331, P. R. China
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Application of BF 3·Et 2O in the synthesis of cyclic organic peroxides (microreview). Chem Heterocycl Compd (N Y) 2020; 56:1146-1148. [PMID: 33144737 PMCID: PMC7595082 DOI: 10.1007/s10593-020-02785-3] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2020] [Accepted: 09/16/2020] [Indexed: 10/28/2022]
Abstract
A summary of recent applications of Lewis acid BF3·Et2O as a catalyst in the synthesis of cyclic organic peroxides is presented.
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10
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Pinet A, Nguyen LT, Figadère B, Ferrié L. Synthesis of 3,5‐Disubstituted 1,2‐Dioxolanes. European J Org Chem 2020. [DOI: 10.1002/ejoc.202000980] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Alexis Pinet
- BioCIS Faculté de Pharmacie Université Paris‐Saclay 5 rue J. B. Clément 92290 Châtenay‐Malabry France
| | - Linh T. Nguyen
- Institute of Marine Biochemistry (IMBC) Vietnam Academy of Science and Technology (VAST) Vietnam
| | - Bruno Figadère
- BioCIS Faculté de Pharmacie Université Paris‐Saclay 5 rue J. B. Clément 92290 Châtenay‐Malabry France
| | - Laurent Ferrié
- BioCIS Faculté de Pharmacie Université Paris‐Saclay 5 rue J. B. Clément 92290 Châtenay‐Malabry France
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Pinet A, Figadère B, Ferrié L. Access to Functionalized 3,5‐Disubstituted 1,2‐Dioxolanes under Mild Conditions through Indium(III) Chloride/Trimethylsilyl Chloride or Scandium(III) Triflate Catalysis. Adv Synth Catal 2019. [DOI: 10.1002/adsc.201901145] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Affiliation(s)
- Alexis Pinet
- BioCIS, Université Paris-Sud, CNRSUniversité Paris-Saclay Châtenay-Malabry 92290 France
| | - Bruno Figadère
- BioCIS, Université Paris-Sud, CNRSUniversité Paris-Saclay Châtenay-Malabry 92290 France
| | - Laurent Ferrié
- BioCIS, Université Paris-Sud, CNRSUniversité Paris-Saclay Châtenay-Malabry 92290 France
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