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Siegel M, Liu L, Pfaffenberger Z, Kisley L. Quantitative Advantages of Corrosion Sensing Using Fluorescence, Microscopy, and Single-Molecule Detection. ACS APPLIED MATERIALS & INTERFACES 2024. [PMID: 39390778 DOI: 10.1021/acsami.4c07800] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/12/2024]
Abstract
The corrosion of metals and alloys is a fundamental issue in modern society. Understanding the mechanisms that cause and prevent corrosion is integral to saving millions of dollars each year and to ensure the safe use of infrastructure subject to the hazardous degrading effects of corrosion. Despite this, corrosion detection techniques have lacked precise, quantitative information, with industries taking a top-down, macroscale approach to analyzing corrosion with tests that span months to years and yield qualitative information. Fluorescence, a well-established optical method, can fill the niche of early-stage, quantitative corrosion detection and can be employed for both bulk and localized testing over time. The latter, fluorescence microscopy, can be pushed to greater levels of detail with single-molecule microscopy, achieving nanometer spatial and subsecond temporal resolutions of corrosion that allow for the extraction of dynamic information and kinetics. This review will present how fluorescence microscopy can provide researchers with a molecular view into the chemical mechanisms of corrosion at interfaces and allow for faster, quantitative studies of how to detect and prevent corrosion.
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Affiliation(s)
- Mark Siegel
- Department of Physics, Case Western Reserve University, Cleveland, Ohio 44106-7079, United States
| | - Lianlian Liu
- Department of Physics, Case Western Reserve University, Cleveland, Ohio 44106-7079, United States
| | - Zechariah Pfaffenberger
- Department of Physics, Case Western Reserve University, Cleveland, Ohio 44106-7079, United States
| | - Lydia Kisley
- Department of Physics, Case Western Reserve University, Cleveland, Ohio 44106-7079, United States
- Department of Chemistry, Case Western Reserve University, Cleveland, Ohio 44106-7079, United States
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2
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Antarasen J, Wellnitz B, Kramer SN, Chatterjee S, Kisley L. Cross-Correlation Increases Sampling in Diffusion-Based Super-Resolution Optical Fluctuation Imaging. CHEMICAL & BIOMEDICAL IMAGING 2024; 2:640-650. [PMID: 39328426 PMCID: PMC11423407 DOI: 10.1021/cbmi.4c00032] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/01/2024] [Revised: 07/11/2024] [Accepted: 07/15/2024] [Indexed: 09/28/2024]
Abstract
Correlation signal processing of optical three-dimensional (x, y, t) data can produce super-resolution images. The second-order cross-correlation function XC 2 has been documented to produce super-resolution imaging with static and blinking emitters but not for diffusing emitters. Here, we both analytically and numerically demonstrate cross-correlation analysis for diffusing particles. We then expand our fluorescence correlation spectroscopy super-resolution optical fluctuation imaging (fcsSOFI) analysis to use cross-correlation as a postprocessing computational technique to extract both dynamic and structural information on particle diffusion in nanoscale structures simultaneously. Cross-correlation maintains the same super-resolution as auto-correlation while also increasing the sampling rates to reduce aliasing for spatial information in both simulated and experimental data. Our work demonstrates how fcsSOFI with cross-correlation can be a powerful signal-processing tool to resolve the nanoscale dynamics and structure in samples relevant to biological and soft materials.
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Affiliation(s)
- Jeanpun Antarasen
- Department of Physics, Case Western Reserve University, Cleveland, Ohio 44106, United States
| | - Benjamin Wellnitz
- Department of Physics, Case Western Reserve University, Cleveland, Ohio 44106, United States
| | - Stephanie N Kramer
- Department of Physics, Case Western Reserve University, Cleveland, Ohio 44106, United States
| | - Surajit Chatterjee
- Department of Physics, Case Western Reserve University, Cleveland, Ohio 44106, United States
| | - Lydia Kisley
- Department of Physics, Case Western Reserve University, Cleveland, Ohio 44106, United States
- Department of Chemistry, Case Western Reserve University, Cleveland, Ohio 44106, United States
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Antarasen J, Wellnitz B, Kramer SN, Chatterjee S, Kisley L. Cross-correlation increases sampling in diffusion-based super-resolution optical fluctuation imaging. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.04.01.587586. [PMID: 38617244 PMCID: PMC11014504 DOI: 10.1101/2024.04.01.587586] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/16/2024]
Abstract
Correlation signal processing of optical three-dimensional (x, y, t) data can produce super-resolution images. The second order cross-correlation function XC 2 has been documented to produce super-resolution imaging with static and blinking emitters but not for diffusing emitters. Here, we both analytically and numerically demonstrate cross-correlation analysis for diffusing particles. We then expand our fluorescence correlation spectroscopy super-resolution optical fluctuation imaging (fcsSOFI) analysis to use cross-correlation as a post-processing computational technique to extract both dynamic and structural information of particle diffusion in nanoscale structures simultaneously. We further show how this method increases sampling rates and reduces aliasing for spatial information in both simulated and experimental data. Our work demonstrates how fcsSOFI with cross-correlation can be a powerful signal-processing tool to resolve the nanoscale dynamics and structure in samples relevant to biological and soft materials. TOC Graphic
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Chatterjee S, Kramer SN, Wellnitz B, Kim A, Kisley L. Spatially Resolving Size Effects on Diffusivity in Nanoporous Extracellular Matrix-like Materials with Fluorescence Correlation Spectroscopy Super-Resolution Optical Fluctuation Imaging. J Phys Chem B 2023; 127:4430-4440. [PMID: 37167609 PMCID: PMC10303168 DOI: 10.1021/acs.jpcb.3c00941] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
It is well documented that the nanoscale structures within porous microenvironments greatly impact the diffusion dynamics of molecules. However, how the interaction between the environment and molecules influences the diffusion dynamics has not been thoroughly explored. Here, we show that fluorescence correlation spectroscopy super-resolution optical fluctuation imaging (fcsSOFI) can be used to accurately measure the diffusion dynamics of molecules within varying matrices such as nanopatterned surfaces and porous agarose hydrogels. Our data demonstrate the robustness of fcsSOFI, where it is possible not only to quantify the diffusion speeds of molecules in heterogeneous media but also to recover the matrix structure with resolution on the order of 100 nm. Using dextran molecules of varying sizes, we show that the diffusion coefficient is sensitive to the change in the molecular hydrodynamic radius. fcsSOFI images further reveal that smaller dextran molecules can freely move through the small pores of the hydrogel and report the detailed porous structure and local diffusion heterogeneities not captured by the average diffusion coefficient. Conversely, bigger dextran molecules are confined and unable to freely move through the hydrogel, highlighting only the larger pore structures. These findings establish fcsSOFI as a powerful tool to characterize spatial and diffusion information of diverse macromolecules within biorelevant matrices.
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Affiliation(s)
- Surajit Chatterjee
- Department of Physics, Case Western Reserve University, Cleveland, Ohio 44106-7079, United States
| | - Stephanie N Kramer
- Department of Physics, Case Western Reserve University, Cleveland, Ohio 44106-7079, United States
| | - Benjamin Wellnitz
- Department of Physics, Case Western Reserve University, Cleveland, Ohio 44106-7079, United States
| | - Albert Kim
- Department of Physics, Case Western Reserve University, Cleveland, Ohio 44106-7079, United States
| | - Lydia Kisley
- Department of Physics, Case Western Reserve University, Cleveland, Ohio 44106-7079, United States
- Department of Chemistry, Case Western Reserve University, Cleveland, Ohio 44106-7079, United States
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Messenger H, Madrid D, Saini A, Kisley L. Native diffusion of fluorogenic turn-on dyes accurately report interfacial chemical reaction locations. Anal Bioanal Chem 2023:10.1007/s00216-023-04639-1. [PMID: 36907920 DOI: 10.1007/s00216-023-04639-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2022] [Revised: 02/24/2023] [Accepted: 03/01/2023] [Indexed: 03/14/2023]
Abstract
Single-molecule fluorescence microscopy with "turn-on" dyes that change fluorescent state after a reaction report on the chemistry of interfaces relevant to analytical and bioanalytical chemistry. Paramount to accurately understanding the phenomena at the ultimate detection limit of a single molecule is ensuring fluorophore properties such as diffusion do not obscure the chemical reaction of interest. Here, we develop Monte Carlo simulations of a dye that undergoes reduction to turn-on at the cathode of a corroded iron surface taking into account the diffusion of the dye molecules in a total internal reflection fluorescence (TIRF) excitation volume, location of the cathode, and chemical reactions. We find, somewhat counterintuitively, that a fast diffusion coefficient of D = 108 nm2/s, corresponding to the dye in aqueous solution, accurately reports the location of single reaction sites. The dyes turn on and are present for the acquisition of a single frame allowing for localization before diffusing out of the thin TIRF excitation volume axially. Previously turned-on (i.e., activated) dyes can also randomly hit the surface surrounding the reaction site leading to a uniform increase in the background. Using concentrations that lead to high turnover rates at the reaction site can achieve signal-to-background ratios of ~100 in our simulation. Therefore, the interplay between diffusion, turn-on reaction rate, and concentration of the dye must be strategically considered to produce accurate images of reaction locations. This work demonstrates that modeling can assist in the design of single-molecule microscopy experiments to understand interfaces related to analytical chemistry such as electrode, nanoparticle, and sensor surfaces.
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Affiliation(s)
- Hannah Messenger
- Department of Physics, Case Western Reserve University, 2076 Adelbert Road, Cleveland, OH, 44106, USA
| | - Daniel Madrid
- Department of Physics, Case Western Reserve University, 2076 Adelbert Road, Cleveland, OH, 44106, USA
| | - Anuj Saini
- Department of Physics, Case Western Reserve University, 2076 Adelbert Road, Cleveland, OH, 44106, USA
| | - Lydia Kisley
- Department of Physics, Case Western Reserve University, 2076 Adelbert Road, Cleveland, OH, 44106, USA. .,Department of Chemistry, Case Western Reserve University, Cleveland, OH, 44106, USA.
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Wathudura P, Wamsley M, Wang A, Chen K, Nawalage S, Wang H, Zou S, Zhang D. Effects of Cascading Optical Processes: Part II: Impacts on Experimental Quantification of Sample Absorption and Scattering Properties. Anal Chem 2023; 95:4461-4469. [PMID: 36787490 DOI: 10.1021/acs.analchem.2c05055] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/16/2023]
Abstract
In Part I of the three companion articles, we reported the effects of light scattering on experimental quantification of scattering extinction, intensity, and depolarization in solutions that contain only scatterers with no significant absorption and photoluminescence activities. The present work (Part II) studies the effects of light scattering and absorption on a series of optical spectroscopic measurements done on samples that contain both absorbers and scatterers, but not emitters. The experimental UV-vis spectrum is the sum of the sample absorption and scattering extinction spectra. However, the upper limit of the experimental Beer's-law-abiding extinction can be limited prematurely by the interference of forward scattered light. Light absorption reduces not only the sample scattering intensity but also the scattering depolarization. The impact of scattering on sample light absorption is complicated, depending on whether the absorption of scattered light is taken into consideration. Scattering reduces light absorption along the optical path length from the excitation source to the UV-vis detector. However, the absorption of the scattered light can be adequate to compensate the reduced light absorption along such optical path, making the impacts of light scattering on the sample total light absorption negligibly small (<10%). The latter finding constitutes a critical validation of the integrating-sphere-assisted resonance synchronous spectroscopic method for experimental quantification of absorption and scattering contribution to the sample UV-vis extinction spectra. The techniques and general guidelines provided in this work should help improve the reliability of optical spectroscopic characterization of nanoscale or larger materials, many of which are simultaneous absorbers and scatterers. The insights from this work are foundational for Part III of this series of work, which is on the cascading optical processes on spectroscopic measurements of fluorescent samples.
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Affiliation(s)
- Pathum Wathudura
- Department of Chemistry, Mississippi State University, Mississippi State, Mississippi 39759, United States
| | - Max Wamsley
- Department of Chemistry, Mississippi State University, Mississippi State, Mississippi 39759, United States
| | - Ankai Wang
- Department of Chemistry, University of Central Florida, Orlando, Florida 32816, United States
| | - Kexun Chen
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, South Carolina 29208, United States
| | - Samadhi Nawalage
- Department of Chemistry, Mississippi State University, Mississippi State, Mississippi 39759, United States
| | - Hui Wang
- Department of Chemistry and Biochemistry, University of South Carolina, Columbia, South Carolina 29208, United States
| | - Shengli Zou
- Department of Chemistry, University of Central Florida, Orlando, Florida 32816, United States
| | - Dongmao Zhang
- Department of Chemistry, Mississippi State University, Mississippi State, Mississippi 39759, United States
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Saluga SJ, Dibble DJ, Blum SA. Superresolved Motions of Single Molecular Catalysts during Polymerization Show Wide Distributions. J Am Chem Soc 2022; 144:10591-10598. [PMID: 35670469 DOI: 10.1021/jacs.2c03566] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The motion of single molecular ruthenium catalysts during and after single turnover events of ring-opening metathesis polymerization is imaged through single-molecule superresolution tracking with a positional accuracy of ±32 nm. This tracking is achieved through the real-time incorporation of spectrally tagged monomer units into active polymer chain ends during living polymerization; thus, by design, only active-catalyst motion is detected and imaged, without convolution by inactive catalysts. The catalysts show diverse individualistic diffusive behaviors with respect to time that persist for up to 20 s. Catalysts occupy three mobility populations: quasi-stationary (23%), intermediate (53%, 65 nm), and large (24%, 145 nm) step sizes. Differences in catalyst mobility populations also exist between individual aggregates (p < 0.001). Such differential motion indicates widely different local catalyst microenvironments during the catalytic turnover. These mobility differences are uniquely observable through single-catalyst microscopy and are not measurable through traditional ensemble analytical techniques for characterizing the behavior of molecular catalysts, such as nuclear magnetic resonance spectroscopy. The measured distributions of active molecular catalyst motions would not be readily predictable through modeling or first-principles, and the range likely impacts individual catalyst turnover rate and selectivity. This range plausibly contributes to property distributions observable in bulk polymers, such as molecular weight polydispersity (e.g., 1.9 in this system), leading to a revised understanding of the mechanistic, microscale origins of macroscale polymer properties.
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Affiliation(s)
- Shannon J Saluga
- Department of Chemistry, University of California, Irvine, California 92697-2025, United States
| | - David Josh Dibble
- Department of Chemistry, University of California, Irvine, California 92697-2025, United States
| | - Suzanne A Blum
- Department of Chemistry, University of California, Irvine, California 92697-2025, United States
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Encapsulation within a coordination cage modulates the reactivity of redox-active dyes. Commun Chem 2022; 5:44. [PMID: 36697669 PMCID: PMC9814915 DOI: 10.1038/s42004-022-00658-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2021] [Accepted: 02/18/2022] [Indexed: 02/08/2023] Open
Abstract
Confining molecules within well-defined nanosized spaces can profoundly alter their physicochemical characteristics. For example, the controlled aggregation of chromophores into discrete oligomers has been shown to tune their optical properties whereas encapsulation of reactive species within molecular hosts can increase their stability. The resazurin/resorufin pair has been widely used for detecting redox processes in biological settings; yet, how tight confinement affects the properties of these two dyes remains to be explored. Here, we show that a flexible PdII6L4 coordination cage can efficiently encapsulate both resorufin and resazurin in the form of dimers, dramatically modulating their optical properties. Furthermore, binding within the cage significantly decreases the reduction rate of resazurin to resorufin, and the rate of the subsequent reduction of resorufin to dihydroresorufin. During our studies, we also found that upon dilution, the PdII6L4 cage disassembles to afford PdII2L2 species, which lacks the ability to form inclusion complexes - a process that can be reversed upon the addition of the strongly binding resorufin/resazurin guests. We expect that the herein disclosed ability of a water-soluble cage to reversibly modulate the optical and chemical properties of a molecular redox probe will expand the versatility of synthetic fluorescent probes in biologically relevant environments.
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Sakaya A, Durantini AM, Gidi Y, Šverko T, Wieczny V, McCain J, Cosa G. Fluorescence-Amplified Detection of Redox Turnovers in Supported Lipid Bilayers Illuminates Redox Processes of α-Tocopherol. ACS APPLIED MATERIALS & INTERFACES 2022; 14:13872-13882. [PMID: 35266688 DOI: 10.1021/acsami.1c23931] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Electron-transfer processes in lipid membranes are key to biological functions, yet challenging to study because of the intrinsic heterogeneity of the systems. Here, we report spectro-electrochemical measurements on indium tin oxide-supported lipid bilayers toward the selective induction and sensing of redox processes in membranes. Working at neutral pH with a fluorogenic α-tocopherol analogue, the dynamics of the two-electron oxidation of the chromanol to a chromanone and the rapid thermal decay of the latter to a chromoquinone are recorded as a rapid surge and drop in intensity, respectively. Continuous voltage cycling reveals rapid chromoquinone two-electron, two-proton reduction to dihydrochromoquinone at negative bias, followed by slow regeneration of the former at positive bias. The kinetic parameters of these different transitions are readily obtained as a function of applied potentials. The sensitivity and selectivity afforded by the reported method enables monitoring signals equivalent to femtoampere currents with a high signal-to-background ratio. The study provides a new method to monitor membrane redox processes with high sensitivity and minimal concentrations and unravels key dynamic aspects of α-tocopherol redox chemistry.
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Affiliation(s)
- Aya Sakaya
- Department of Chemistry and Quebec Center for Advanced Materials (QCAM), McGill University, 801 Sherbrooke Street West, Montreal, Québec H3A 0B8, Canada
| | - Andrés M Durantini
- Department of Chemistry and Quebec Center for Advanced Materials (QCAM), McGill University, 801 Sherbrooke Street West, Montreal, Québec H3A 0B8, Canada
| | - Yasser Gidi
- Department of Chemistry and Quebec Center for Advanced Materials (QCAM), McGill University, 801 Sherbrooke Street West, Montreal, Québec H3A 0B8, Canada
| | - Tara Šverko
- Department of Chemistry and Quebec Center for Advanced Materials (QCAM), McGill University, 801 Sherbrooke Street West, Montreal, Québec H3A 0B8, Canada
| | - Vincent Wieczny
- Department of Chemistry and Quebec Center for Advanced Materials (QCAM), McGill University, 801 Sherbrooke Street West, Montreal, Québec H3A 0B8, Canada
| | - Julia McCain
- Department of Chemistry and Quebec Center for Advanced Materials (QCAM), McGill University, 801 Sherbrooke Street West, Montreal, Québec H3A 0B8, Canada
| | - Gonzalo Cosa
- Department of Chemistry and Quebec Center for Advanced Materials (QCAM), McGill University, 801 Sherbrooke Street West, Montreal, Québec H3A 0B8, Canada
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An J, Song X, Wan W, Chen Y, Si H, Duan H, Li L, Tang B. Kinetics of the Photoelectron-Transfer Process Characterized by Real-Time Single-Molecule Fluorescence Imaging on Individual Photocatalyst Particles. ACS Catal 2021. [DOI: 10.1021/acscatal.1c00983] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Affiliation(s)
- Jinghua An
- College of Chemistry, Chemical Engineering and Materials Science, Key Laboratory of Molecular and Nano Probes, Ministry of Education, Collaborative Innovation Center of Functionalized Probes for Chemical Imaging in University of Shandong, Institute of Molecular and Nano Science, Shandong Normal University, Jinan 250014, People’s Republic of China
| | - Xiaoting Song
- College of Chemistry, Chemical Engineering and Materials Science, Key Laboratory of Molecular and Nano Probes, Ministry of Education, Collaborative Innovation Center of Functionalized Probes for Chemical Imaging in University of Shandong, Institute of Molecular and Nano Science, Shandong Normal University, Jinan 250014, People’s Republic of China
| | - Wenbo Wan
- School of Information Science and Engineering, Shandong Normal University, Jinan 250014, People’s Republic of China
| | - Yanzheng Chen
- College of Chemistry, Chemical Engineering and Materials Science, Key Laboratory of Molecular and Nano Probes, Ministry of Education, Collaborative Innovation Center of Functionalized Probes for Chemical Imaging in University of Shandong, Institute of Molecular and Nano Science, Shandong Normal University, Jinan 250014, People’s Republic of China
| | - Haibin Si
- College of Chemistry, Chemical Engineering and Materials Science, Key Laboratory of Molecular and Nano Probes, Ministry of Education, Collaborative Innovation Center of Functionalized Probes for Chemical Imaging in University of Shandong, Institute of Molecular and Nano Science, Shandong Normal University, Jinan 250014, People’s Republic of China
| | - Huichuan Duan
- School of Information Science and Engineering, Shandong Normal University, Jinan 250014, People’s Republic of China
| | - Lu Li
- College of Chemistry, Chemical Engineering and Materials Science, Key Laboratory of Molecular and Nano Probes, Ministry of Education, Collaborative Innovation Center of Functionalized Probes for Chemical Imaging in University of Shandong, Institute of Molecular and Nano Science, Shandong Normal University, Jinan 250014, People’s Republic of China
| | - Bo Tang
- College of Chemistry, Chemical Engineering and Materials Science, Key Laboratory of Molecular and Nano Probes, Ministry of Education, Collaborative Innovation Center of Functionalized Probes for Chemical Imaging in University of Shandong, Institute of Molecular and Nano Science, Shandong Normal University, Jinan 250014, People’s Republic of China
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