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Westawker LP, Khusnutdinova JK, Wallick RF, Mirica LM. Palladium K-edge X-ray Absorption Spectroscopy Studies on Controlled Ligand Systems. Inorg Chem 2023; 62:21128-21137. [PMID: 38039413 DOI: 10.1021/acs.inorgchem.3c03032] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2023]
Abstract
X-ray absorption spectroscopy (XAS) is widely used across the life and physical sciences to identify the electronic properties and structure surrounding a specific element. XAS is less often used for the characterization of organometallic compounds, especially for sensitive and highly reactive species. In this study, we used solid- and solution-phase XAS to compare a series of 25 palladium complexes in controlled ligand environments. The compounds include palladium centers in the formal I, II, III, and IV oxidation states, supported by tridentate and tetradentate macrocyclic ligands, with different halide and methyl ligand combinations. The Pd K-edge energies increased not only upon oxidizing the metal center but also upon increasing the denticity of the ligand framework, substituting sigma-donating methyl groups with chlorides, and increasing the charge of the overall metal complex by replacing charged ligands with neutral ligands. These trends were then applied to characterize compounds whose oxidation states were otherwise unconfirmed.
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Affiliation(s)
- Luke P Westawker
- Department of Chemistry, University of Illinois at Urbana-Champaign, 600 S. Mathews Avenue, Urbana, Illinois 61801, United States
| | - Julia K Khusnutdinova
- Coordination Chemistry and Catalysis Unit, Okinawa Institute of Science and Technology Graduate University, 1919-1 Tancha, Onna-son, Okinawa 904-0495, Japan
| | - Rachel F Wallick
- Department of Chemistry, University of Illinois at Urbana-Champaign, 600 S. Mathews Avenue, Urbana, Illinois 61801, United States
| | - Liviu M Mirica
- Department of Chemistry, University of Illinois at Urbana-Champaign, 600 S. Mathews Avenue, Urbana, Illinois 61801, United States
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2
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Chakrabarti S, Woods TJ, Mirica LM. Insights into the Mechanism of CO 2 Electroreduction by Molecular Palladium-Pyridinophane Complexes. Inorg Chem 2023; 62:16801-16809. [PMID: 37787756 DOI: 10.1021/acs.inorgchem.3c02236] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/04/2023]
Abstract
Herein, we report the synthesis, characterization, and electrocatalytic CO2 reduction activity of a series of Pd(II) complexes supported by tetradentate pyridinophane ligands. In particular, we focus on the electrocatalytic CO2 reduction activity of a Pd(II) complex supported by the mixed hard--soft donor ligand 2,11-dithia[3.3](2,6)pyridinophane (N2S2). We also provide spectroscopic evidence of a CO-induced decomposition pathway for the same catalyst, which provides insights into catalyst poisoning for molecular Pd CO2 reduction electrocatalysts.
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Affiliation(s)
- Sagnik Chakrabarti
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States
| | - Toby J Woods
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States
| | - Liviu M Mirica
- Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, United States
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3
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Serafim LF, Jayasinghe-Arachchige VM, Wang L, Rathee P, Yang J, Moorkkannur N S, Prabhakar R. Distinct chemical factors in hydrolytic reactions catalyzed by metalloenzymes and metal complexes. Chem Commun (Camb) 2023. [PMID: 37366367 DOI: 10.1039/d3cc01380d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/28/2023]
Abstract
The selective hydrolysis of the extremely stable phosphoester, peptide and ester bonds of molecules by bio-inspired metal-based catalysts (metallohydrolases) is required in a wide range of biological, biotechnological and industrial applications. Despite the impressive advances made in the field, the ultimate goal of designing efficient enzyme mimics for these reactions is still elusive. Its realization will require a deeper understanding of the diverse chemical factors that influence the activities of both natural and synthetic catalysts. They include catalyst-substrate complexation, non-covalent interactions and the electronic nature of the metal ion, ligand environment and nucleophile. Based on our computational studies, their roles are discussed for several mono- and binuclear metallohydrolases and their synthetic analogues. Hydrolysis by natural metallohydrolases is found to be promoted by a ligand environment with low basicity, a metal bound water and a heterobinuclear metal center (in binuclear enzymes). Additionally, peptide and phosphoester hydrolysis is dominated by two competing effects, i.e. nucleophilicity and Lewis acid activation, respectively. In synthetic analogues, hydrolysis is facilitated by the inclusion of a second metal center, hydrophobic effects, a biological metal (Zn, Cu and Co) and a terminal hydroxyl nucleophile. Due to the absence of the protein environment, hydrolysis by these small molecules is exclusively influenced by nucleophile activation. The results gleaned from these studies will enhance the understanding of fundamental principles of multiple hydrolytic reactions. They will also advance the development of computational methods as a predictive tool to design more efficient catalysts for hydrolysis, Diels-Alder reaction, Michael addition, epoxide opening and aldol condensation.
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Affiliation(s)
- Leonardo F Serafim
- Department of Chemistry, University of Miami, Coral Gables, FL 33146, USA.
| | | | - Lukun Wang
- Department of Chemistry, University of Miami, Coral Gables, FL 33146, USA.
| | - Parth Rathee
- Department of Chemistry, University of Miami, Coral Gables, FL 33146, USA.
| | - Jiawen Yang
- Department of Chemistry, University of Miami, Coral Gables, FL 33146, USA.
| | | | - Rajeev Prabhakar
- Department of Chemistry, University of Miami, Coral Gables, FL 33146, USA.
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4
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Jayasinghe-Arachchige VM, Serafim LF, Hu Q, Ozen C, Moorkkannur SN, Schenk G, Prabhakar R. Elucidating the Roles of Distinct Chemical Factors in the Hydrolytic Activities of Hetero- and Homonuclear Synthetic Analogues of Binuclear Metalloenzymes. ACS Catal 2023. [DOI: 10.1021/acscatal.2c05758] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/18/2023]
Affiliation(s)
| | - Leonardo F. Serafim
- Department of Chemistry, University of Miami, Coral Gables, Florida 33146, United States
| | - Qiaoyu Hu
- Department of Chemistry, University of Miami, Coral Gables, Florida 33146, United States
| | - Cihan Ozen
- Department of Chemistry, University of Miami, Coral Gables, Florida 33146, United States
| | - Sreerag N. Moorkkannur
- Department of Chemistry, University of Miami, Coral Gables, Florida 33146, United States
| | - Gerhard Schenk
- School of Chemistry and Molecular Biosciences, The University of Queensland, St. Lucia, Brisbane, Queensland 4072, Australia
| | - Rajeev Prabhakar
- Department of Chemistry, University of Miami, Coral Gables, Florida 33146, United States
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5
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Palladium complexes bearing calixpyrrole ligands with pendant hydrogen bond donors: Synthesis, structural characterization, electrochemistry and dihydrogen evolution. Polyhedron 2022. [DOI: 10.1016/j.poly.2022.116046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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6
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Cha J, Lee E, Yandulov DV. Mechanistic Studies for Pd(II)(O 2) Reduction Generating Pd(0) and H 2O: Formation of Pd(OH) 2 as a Key Intermediate. Inorg Chem 2022; 61:14544-14552. [PMID: 36050901 DOI: 10.1021/acs.inorgchem.2c01139] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Molecular oxygen (O2) remains to be an ideal yet underutilized feedstock for the oxidative transformation of organic substrates and renewable energy systems such as fuel cells. Palladium (Pd) has shown particular promise in enabling these applications. The present study describes a Pd-mediated O2 reduction to water via C-H activation of 9,10-dihydroanthracene (DHA) by a Pd(II) η2-peroxo complex 1O2. The reaction yields stoichiometric anthracene and Pd(0) product 1 and is notable in two respects. First, plots of concentrations of the reaction participants over time have distinctly sigmoidal shapes, indicating that conversion accelerates over time and implying autocatalysis. Second, the reaction proceeds via a genuine monometallic Pd(II) dihydroxide 1(OH)2 directly observed to grow and decay as an intermediate. Confirming its role as an intermediate, the dihydroxide 1(OH)2 was found to mediate C-H oxidation of DHA on par in activity with the peroxo compound 1O2. Mechanistic studies with density functional theory (DFT) calculations suggested that both 1O2 and 1(OH)2 react with DHA by hydrogen atom transfer (HAT) and that autocatalysis in the 1O2 reaction results from oxidative addition of the initial Pd(II) complex 1O2 to the Pd(0) product 1. This reaction forms a transient bis(μ-oxo) Pd(II) dimer 1O21 that is more active in the HAT oxidation of DHA than the initial 1O2.
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Affiliation(s)
- Jeongmin Cha
- Department of Chemistry, Pohang University of Science and Technology, Pohang 790-784, Republic of Korea
| | - Eunsung Lee
- Department of Chemistry, Pohang University of Science and Technology, Pohang 790-784, Republic of Korea.,Department of Chemistry, Stanford University, Stanford, California 94305-5080, United States
| | - Dmitry V Yandulov
- Department of Chemistry, Stanford University, Stanford, California 94305-5080, United States.,Department of Biology and Biotechnology, National Research University Higher School of Economics, Moscow 117418, Russia
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A New Electrocatalytic System Based on Copper (II) Chloride and Magnetic Molecularly Imprinted Polymer Nanoparticles in 3D Printed Microfluidic Flow Cell for Enzymeless and Low-Potential Cholesterol Detection. J Electroanal Chem (Lausanne) 2022. [DOI: 10.1016/j.jelechem.2022.116853] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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8
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Garcia LM, Zambiazi PJ, Chair K, Doan TD, Ramos AS, Nandenha J, De Souza RFB, Otubo L, Duong A, O. Neto A. cis-[6-(Pyridin-2-yl)-1,3,5-triazine-2,4-diamine](dichloride) Palladium(II)-Based Electrolyte Membrane Reactors for Partial Oxidation Methane to Methanol. ACS OMEGA 2022; 7:24249-24255. [PMID: 35874252 PMCID: PMC9301691 DOI: 10.1021/acsomega.2c01463] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Methane is an abundant resource and the main constituent of natural gas. It can be converted into higher value-added products and as a subproduct of electricity co-generation. The application of polymer electrolyte reactors for the partial oxidation of methane to methanol to co-generate power and chemical products is a topic of great interest for gas and petroleum industries, especially with the use of materials with a lower amount of metals, such as palladium complex. In this study, we investigate the ideal relationship between cis-[6-(pyridin-2-yl)-1,3,5-triazine-2,4-diamine(dichloride)palladium(II)] (Pd-complex) nanostructure and carbon to obtain a stable, conductive, and functional reagent diffusion electrode. The physical and structural properties of the material were analyzed by Fourier transform infrared (FT-IR) and Raman spectroscopies, transmission electron microscopy (TEM), and X-ray powder diffraction (XRD) techniques. The electrocatalytic activity studies revealed that the most active proportion was 20% of Pd-complex supported on carbon (m/m), which was measured with lower values of open-circuit and power density but with higher efficiency in methanol production with reaction rates of r = 4.2 mol L-1·h-1 at 0.05 V.
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Affiliation(s)
- Luis M.
S. Garcia
- Instituto
de Pesquisas Energéticas e Nucleares, IPEN/CNEN−SP, Av. Prof. Lineu Prestes, 2242 Cidade Universitária, CEP 05508-000 São Paulo, SP, Brazil
- Département
de Chimie, Biochimie et Physique, Institut de Recherchesur l’Hydrogène, Université du Québec
a Trois-Rivières, Trois-Rivières, Québec G9A5H7, Canada
| | - Priscilla J. Zambiazi
- Instituto
de Pesquisas Energéticas e Nucleares, IPEN/CNEN−SP, Av. Prof. Lineu Prestes, 2242 Cidade Universitária, CEP 05508-000 São Paulo, SP, Brazil
| | - Khaoula Chair
- Département
de Chimie, Biochimie et Physique, Institut de Recherchesur l’Hydrogène, Université du Québec
a Trois-Rivières, Trois-Rivières, Québec G9A5H7, Canada
| | - Tuan Duy Doan
- Département
de Chimie, Biochimie et Physique, Institut de Recherchesur l’Hydrogène, Université du Québec
a Trois-Rivières, Trois-Rivières, Québec G9A5H7, Canada
| | - Andrezza S. Ramos
- Instituto
de Pesquisas Energéticas e Nucleares, IPEN/CNEN−SP, Av. Prof. Lineu Prestes, 2242 Cidade Universitária, CEP 05508-000 São Paulo, SP, Brazil
| | - Julio Nandenha
- Instituto
de Pesquisas Energéticas e Nucleares, IPEN/CNEN−SP, Av. Prof. Lineu Prestes, 2242 Cidade Universitária, CEP 05508-000 São Paulo, SP, Brazil
| | - Rodrigo F. B. De Souza
- Instituto
de Pesquisas Energéticas e Nucleares, IPEN/CNEN−SP, Av. Prof. Lineu Prestes, 2242 Cidade Universitária, CEP 05508-000 São Paulo, SP, Brazil
| | - Larissa Otubo
- Instituto
de Pesquisas Energéticas e Nucleares, IPEN/CNEN−SP, Av. Prof. Lineu Prestes, 2242 Cidade Universitária, CEP 05508-000 São Paulo, SP, Brazil
| | - Adam Duong
- Département
de Chimie, Biochimie et Physique, Institut de Recherchesur l’Hydrogène, Université du Québec
a Trois-Rivières, Trois-Rivières, Québec G9A5H7, Canada
| | - Almir O. Neto
- Instituto
de Pesquisas Energéticas e Nucleares, IPEN/CNEN−SP, Av. Prof. Lineu Prestes, 2242 Cidade Universitária, CEP 05508-000 São Paulo, SP, Brazil
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9
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Hayton TW, Shafaat HS. Periodic TableTalks: An Oasis of Science within a Conference Desert. Inorg Chem 2022; 61:5965-5971. [DOI: 10.1021/acs.inorgchem.2c01108] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Trevor W. Hayton
- Department of Chemistry and Biochemistry, University of California, Santa Barbara, California 93106, United States
| | - Hannah S. Shafaat
- Department of Chemistry and Biochemistry, The Ohio State University, Columbus, Ohio 43210, United States
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10
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Zhang A, Liu Y, Wu J, Xue L, Tang Y, Yan X, Zeng S. Weakening O O binding on Au-Cu2O/carbon nanotube catalysts with local misfit dislocation by interfacial coupling interaction for oxygen reduction reaction. Chem Eng Sci 2022. [DOI: 10.1016/j.ces.2022.117513] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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11
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Panza N, Tseberlidis G, Caselli A, Vicente R. Recent progresses in the chemistry of 12-membered pyridine-containing tetraazamacrocycles: From synthesis to catalysis. Dalton Trans 2022; 51:10635-10657. [DOI: 10.1039/d2dt00597b] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
This article provides an overview (non-comprehensive) on recent developments regarding pyridine-containing 12-membered tetraazamacrocycles with pyclen or Py2N2 backbones and their metal complexes from 2017 to the present. Firstly, the synthesis...
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