N-Heterocyclic Carbene (NHC)-Catalyzed sp3 β-C–H Activation of Saturated Carbonyl Compounds: Mechanism, Role of NHC, and Origin of Stereoselectivity

Mechanisms and Stereoselectivities in the NHC-Catalyzed [4 + 2] Annulation of 2-Bromoenal and 6-Methyluracil-5-carbaldehyde

To disclose the reaction mechanism and selectivity in the NHC-catalyzed reaction of 2-bromoenal and 6-methyluracil-5-carbaldehyde, a systematic computational study has been performed. According to DFT computations, the catalytic cycle is divided into eight elementary steps: nucleophilic attack of the NHC on 2-bromoenal, 1,2-proton transfer, C-Br bond dissociation, 1,3-proton transfer, addition to 6-methyluracil-5-carbaldehyde, [2 + 2] cycloaddition, NHC dissociation, and decarboxylation. The Bronsted acid DABCO·H+ plays a crucial role in proton transfer and decarboxylation steps. The addition to 6-methyluracil-5-carbaldehyde determines both chemoselectivity and stereoselectivity, leading to R-configured carbocycle-fused uracil, in agreement with experimental results. NCI analysis indicates that the CH···N, CH···π, and LP···π interactions should be the key factor for determining the stereoselectivity. ELF analysis shows the main role of the NHC in promoting C-Br bond dissociation. The mechanistic insights obtained in the present work may guide the rational design of potential NHC catalysts.

Access to Spiropyrazolone-butenolides through NHC-Catalyzed [3 + 2]-Asymmetric Annulation of 3-Bromoenals and 1H-Pyrazol-4,5-diones

The stereoselective synthesis of spirocyclic pyrazolin-5-ones by N-heterocyclic carbene (NHC) organocatalysis has been less studied so far. For this reason and considering the interest of this class of compounds, here, we present the NHC-catalyzed [3 + 2]-asymmetric annulation of β-bromoenals and 1H-pyrazol-4,5-diones that achieves to produce chiral spiropyrazolone-butenolides. The synthesis is general for aryl and heteroaryl β-bromo-α,β-unsaturated aldehydes and 1,3-disubstituted pyrazolones. The spirobutenolides have been obtained in good yields (up to 88%) and enantioselectivities (up to 97:3 er). This constitutes the first described example using pyrazoldiones as the starting materials for this class of spiro compounds.

Prediction on chemoselectivity for selected organocatalytic reactions by the DFT version of the Hückel-defined free valence index

The DFT version of the Hückel-defined free valence (HFV) index has been suggested and successfully used for predicting the origin of chemoselectivity in the selected organocatalytic reactions.

Remote N–H activation of indole aldehydes: an investigation of the mechanism, origin of selectivities, and role of the catalyst

Density functional theory investigation on the N-heterocyclic carbene-catalysed synthesis of oxazinoindole derivatives via N–H activation of indole aldehydes.

A DFT study on the mechanism and regioselectivity of NHC-catalyzed double acylation of aromatic 1,2-diketones with α,β-unsaturated ketones

The possible mechanisms and the origin of regioselectivity of the N-heterocyclic carbene (NHC)-catalyzed double acylation reaction of aromatic 1,2-diketones with α,β-unsaturated ketones have been theoretically studied using density functional theory.

NMR Crystallography Enhanced by Quantum Chemical Calculations and Liquid State NMR Spectroscopy for the Investigation of Se-NHC Adducts*

N-heterocyclic carbene ligands (NHC) are widely utilized in catalysis and material science. They are characterized by their steric and electronic properties. Steric properties are usually quantified on the basis of their static structure, which can be determined by X-ray diffraction. The electronic properties are estimated in the liquid state; for example, via the ⁷⁷ Se liquid state NMR of Se-NHC adducts. We demonstrate that ⁷⁷ Se NMR crystallography can contribute to the characterization of the structural and electronic properties of NHC in solid and liquid states. Selected Se-NHC adducts are investigated via ⁷⁷ Se solid state NMR and X-ray crystallography, supported by quantum chemical calculations. This investigation reveals a correlation between the molecular structure of adducts and NMR parameters, including not only isotropic chemical shifts but also the other chemical shift tensor components. Afterwards, the liquid state ⁷⁷ Se NMR data is presented and interpreted in terms of the quantum chemistry modelling. The discrepancy between the structural and electronic properties, and in particular the π-accepting abilities of adducts in the solid and liquid states is discussed. Finally, the ¹³ C isotropic chemical shift from the liquid state NMR and the ¹³ C tensor components are also discussed, and compared with their ⁷⁷ Se counterparts. ⁷⁷ Se NMR crystallography can deliver valuable information about NHC ligands, and together with liquid state ⁷⁷ Se NMR can provide an in-depth outlook on the properties of NHC ligands.

N-Heterocyclic Carbene-Catalyzed Asymmetric C-O Bond Construction Between Benzoic Acid and o-Phthalaldehyde: Mechanism and Origin of Stereoselectivity

A computational study was contributed to explore the origin of stereoselectivity of NHC-mediated cyclization reaction between benzoic acid and o-phthalaldehyde for asymmetric construction of phthalidyl ester. The most energetically favorable pathway mainly includes the following steps: (1) nucleophilic attack on carbonyl carbon of o-phthalaldehyde by catalyst NHC, (2) formation of Breslow intermediate, (3) oxidation by DQ, (4) asymmetric formation of dual C-O bonds, and (5) dissociation of catalyst with the product. The C-O bond formation was testified as the stereoselectivity-determining step, the R-configurational pathway is more energetically favorable than the S-configurational one. The non-covalent interaction (NCI) and atom-in-molecule (AIM) analyses were performed to reveal that the O-H ⋅⋅⋅ O and C-H ⋅⋅⋅ O hydrogen-bond interactions are the key factors for controlling the stereoselectivity. The detailed mechanism and origin of stereoselectivity give useful insights for understanding organocatalytic reactions for asymmetric construction of C-O bond.

A Density Functional Theory Study on Et-BAC-Catalyzed 1,6-Conjugate Addition of p-Chlorobenzaldehyde to p-Quinone Methide for the Synthesis of α,α'-Diarylated Ketones

Umpolung-based organocatalysis has made a remarkable breakthrough in the field of synthetic organic chemistry. Among a plethora of umpolung catalysts, bis(amino)cyclopropenylidenes (BACs) have emerged as efficient organocatalysts with potential applications in synthesizing numerous essential organic moieties. In this study, a plausible mechanism for bis(diethylamino)cyclopropenylidene (Et-BAC)-catalyzed synthesis of α,α'-diarylated ketones has been established using the density functional theory (DFT) method. The proposed catalytic cycle of the studied reaction initiates with the nucleophilic interaction of Et-BAC with p-chlorobenzaldehyde to form a zwitterionic intermediate, which is then transformed to a reactive Breslow intermediate. The Breslow intermediate further undergoes a chemoselective and stereoselective 1,6-conjugate addition reaction with p-quinone methide to form a new C-C bond connection. Finally, the generated adduct undergoes a proton shift reaction with the assistance of both 8-diazabicyclo(5.4.0)undec-7-ene (DBU) and protonated DBU to yield the desired product. Conceptual DFT-derived reactivity indices and frontier molecular orbital theory analysis have been successfully utilized to unravel the role of Et-BAC in this studied reaction. In addition to Et-BAC, DBU and protonated DBU also play a very important role in lowering the activation energy barrier of proton transfer steps. This investigation will help in the rational designing of simple nonheterocyclic carbene-mediated novel organic transformations.

Tale of the Breslow intermediate, a central player in N-heterocyclic carbene organocatalysis: then and now

N-Heterocyclic carbenes (NHCs) belong to the popular family of organocatalysts used in a wide range of reactions, including that for the synthesis of complex natural products and biologically active compounds. In their organocatalytic manifestation, NHCs are known to impart umpolung reactivity to aldehydes and ketones, which are then exploited in the generation of homoenolate, acyl anion, and enolate equivalents suitable for a plethora of reactions such as annulation, benzoin, Stetter, Claisen rearrangement, cycloaddition, and C-C and C-H bond functionalization reactions and so on. A common thread that runs through these NHC catalyzed reactions is the proposed involvement of an enaminol, also known as the Breslow intermediate, formed by the nucleophilic addition of an NHC to a carbonyl group of a suitable electrophile. In the emerging years of NHC catalysis, enaminol remained elusive and was largely considered a putative intermediate owing to the difficulties encountered in its isolation and characterization. However, in the last decade, synergistic efforts utilizing an array of computational and experimental techniques have helped in gaining important insights into the formation and characterization of Breslow intermediates. Computational studies have suggested that a direct 1,2-proton transfer within the initial zwitterionic intermediate, generated by the action of an NHC on the carbonyl carbon, is energetically prohibitive and hence the participation of other species capable of promoting an assisted proton transfer is more likely. The proton transfer assisted by additives (such as acids, bases, other species, or even a solvent) was found to ease the kinetics of formation of Breslow intermediates. These important details on the formation, in situ detection, isolation, and characterization of the Breslow intermediate are scattered over a series of reports spanning well over a decade, and we intend to consolidate them in this review and provide a critical assessment of these developments. Given the central role of the Breslow intermediate in organocatalytic reactions, this treatise is expected to serve as a valuable source of knowledge on the same.

Mechanistic Studies on N-Heterocyclic Carbene-Catalyzed Umpolung of β,γ-Unsaturated α-Diketones

The mechanism of N-heterocyclic carbene-catalyzed umpolung of β,γ-unsaturated α-diketone was studied using both density functional theory (DFT) calculations and experimental methods. In contrast to the originally proposed mechanism, the calculations revealed a more complicated process involving both nucleophilic O-acylated homoenolate and electrophilic α,β-unsaturated acyl azolium intermediates. The experimental studies confirmed the existence of the aforementioned two key intermediates. A revised mechanism has been proposed to demonstrate the detailed mechanistic insights into the product formation.

Chiral phosphoric acid catalyzed atroposelective C–H amination of arenes: mechanisms, origin and influencing factors of enantioselectivity

The amination reaction between azonaphthalene and carbazole catalyzed by chiral phosphoric acid was theoretically investigated, and the mechanism, origin and influencing factors of enantioselectivity were elaborated.

Insight into the organocatalytic arylation of azonaphthalenes with α-chloroaldehydes: the general mechanism and origin of selectivities

The mechanism and origin of selectivities of NHC-catalyzed arylation of azonaphthalenes with α-chloroaldehydes have been theoretically studied for the first time.

An electrochemically controlled release of NHCs using iron bis(dithiolene) N-heterocyclic carbene complexes

A series of five coordinated [Fe(NHC)(S₂C₂R₂)₂] complexes were isolated and subjected to electrochemical reduction for the facile release of NHCs in the catalytic media.

High-energetic and low-sensitive 1,3,5-triamino 2,4,6-trinitrobenzene (TATB) crystal: first principles investigation and Hirshfeld surface analysis

The N–H⋯O hydrogen bonding between neighboring TATB molecules within a planar layer cooperates with π⋯π interaction between two adjacent molecules from two adjacent layers in the TATB crystal.

Theoretical model for N-heterocyclic carbene-catalyzed decarboxylation reactions

A general mechanism for N-heterocyclic carbene-catalyzed decarboxylation reactions has been studied using DFT calculations.

Unveiling the Chemo- and Stereoselectivities of NHC-Catalyzed Reactions of an Aliphatic Ester with Aminochalcone

The possible mechanisms and origin of selectivities in N-heterocyclic carbene (NHC)-catalyzed reactions of an aliphatic ester with aminochalcone were studied using density functional theory. Herein, a general mechanistic map involving various types of possible intermediates was discovered, and the corresponding chemoselective pathways were systematically investigated. Based on the computational results, the most energetically favorable reaction pathway mainly involved in the following processes: formation of a homoenolate intermediate via α/β-H elimination, formal Michael addition of a homoenolate intermediate to aminochalcone, intramolecular aldol-type reaction, and ring closure to form the lactam product. Furthermore, the formal Michael addition process was shown to be the stereoselectivity-determining step, generating the RR-configured product preferentially. The chemoselectivity was successfully predicted by comparing the ω + N index of reacting ability for a nucleophile (N) and electrophile (E). This work would provide a general guideline for predicting chemoselectivity in NHC-catalyzed reactions.

Prediction of NHC-catalyzed chemoselective functionalizations of carbonyl compounds: a general mechanistic map

Generally, N-heterocyclic carbene (NHC) complexed with carbonyl compounds would transform into several important active intermediates, i.e., enolates, Breslow intermediates, or acylazolium intermediates, which act as either a nucleophile (Nu) or an electrophile (E) to react with the other E/Nu partner. Hence, the key to predicting the origin of chemoselectivity is to compute the activity (i.e., electrophilic index ω for E and nucleophilic index N for Nu) and stability of the intermediates and products, which are suggested in a general mechanistic map of these reactions. To support this point, we selected and studied different cases of the NHC-catalyzed reactions of carbonyl compounds in the presence of a base and/or an oxidant, in which multiple possible pathways involving acylazolium, enolate, Breslow, and α,β-unsaturated acylazolium intermediates were proposed and a novel index ω + N of the E and Nu partners was employed to exactly predict the energy barrier of the chemoselective step in theory. This work provides a guide for determining the general principle behind organocatalytic reactions with various chemoselectivities, and suggests a general application of the reaction index in predicting the chemoselectivity of the nucleophilic and electrophilic reactions.

A novel index ω + N can be used to predict the chemoselectivity according to the general NHC-catalyzed reaction mechanism.

Copper(i)/Ganphos catalysis: enantioselective synthesis of diverse spirooxindoles using iminoesters and alkyl substituted methyleneindolinones

A copper-catalyzed asymmetric 1,3-dipolar cycloaddition of glycine iminoesters with alkyl substituted 3-methylene-2-oxindoles is described. By using de novo design of P-stereogenic phosphines as ligands, spiro[pyrrolidin-3,3'-oxindole]s are generated in good to excellent yields with high asymmetric induction. A further reduced catalyst loading of 0.1 mol% is sufficient to achieve a satisfactory enantioselectivity of 90% ee. The DFT calculations suggest the second Michael addition of the 1,3-dipole to be the rate- and enantio-determining step. A key feature of this 1,3-dipolar cycloaddition is the wide substrate applicability, even with alkyl aldehyde-derived azomethine ylide; thus it has streamlined a highly enantioselective access to a new class of antiproliferative agents, MDM2-p53.

The DFT Quest for Possible Reaction Pathways, Catalytic Species, and Regioselectivity in the InCl3-Catalyzed Cycloaddition of N-Tosyl Formaldimine with Olefins or Allenes

The present work focuses on a theoretical investigation of the plausible mechanism, determination of catalytically active species, and understanding of the regioselectivity in the InCl₃-catalyzed cycloaddition of N-tosyl formaldimine with alkenes or allenes. InCl₃ and InCl₂⁺ coordinated by dichloroethane (InCl₂⁺-DCE) were investigated as model catalytic systems. DFT data supported that InCl₂⁺-DCE represent the plausible in situ generated catalytic species. The catalytic cycle starts from the coordination of N-tosyl formaldimine to InCl₂⁺-DCE, generating an In-complexed iminium intermediate. This then undergoes intermolecular reaction (aza-Prins) with alkene substrate to form a carbocation intermediate, which is chemoselectively attacked by the second N-tosyl formaldimine molecule to form a formaldiminium intermediate. In a final step, this intermediate undergoes the ring closure, leading to hexahydropyrimidine along with the regeneration of catalyst. In addition, our DFT results indicate that N-tosyl formaldimine not only acts as a reactant but also accelerates the 1,3-H-shift as a proton acceptor, giving an experimentally observed allylamide product. Also, the "iminium/alkene/imine" path was supported by calculation results for diastereoselective [2 + 2 + 2] reaction using an internal alkene. Finally, the regioselectivity of the InCl₃-catalyzed cycloaddition using allenes along with N-tosyl formaldimine was also analyzed.

Origin of stereoselectivity in an isothiourea catalyzed Michael addition reaction of aryl ester with vinyl disulfone

The origin of stereoselectivity in an isothiourea-catalyzed addition reaction of aryl ester with vinyl disulfone was explored for the first time.

Insights into Lewis base-catalyzed chemoselective [3 + 2] and [3 + 4] annulation reactions of MBH carbonates

The chemoselectivity of Lewis base-catalyzed [3 + 2] and [3 + 4] annulation reactions of MBH carbonates can be predicted using FMO overlap analysis.

Computational study on NHC catalyzed [4+2] annulation between γ-chloroenals and pyrazolinones: mechanism and stereoselectivity

Mechanisms and origins of stereoselectivity of NHC-catalyzed reaction between γ-chloroenal and α-arylidene pyrazolinone.

Chiral phosphoric acid catalyzed asymmetric arylation of indolesvianucleophilic aromatic substitution: mechanisms and origin of enantioselectivity

Asymmetric arylation of indolesvianucleophilic aromatic substitution can be effectively achieved using chiral phosphoric acid as catalyst, where the mechanisms and origin of enantioselectivity were explored theoretically.

A combined experimental and computational study of NHC-promoted desulfonylation of tosylated aldimines

NHC-catalyzed mild desulfonylation of tosylated aldimines provides efficient access to aryl nitriles with broad substrate scope. DFT calculations demonstrate that the reaction undergoes multiple stepwise processes.

Insights into isothiourea-catalyzed asymmetric [3 + 3] annulation of α,β-unsaturated aryl esters with 2-acylbenzazoles: mechanism, origin of stereoselectivity and switchable chemoselectivity

The switchable chemoselectivity of isothiourea-catalyzed asymmetric [3 + 3] annulation of α,β-unsaturated aryl esters with 2-acylbenzazoles has been predicted successfully.

A theoretical review for novel Lewis base amine/imine-catalyzed reactions

Recent advances in computational investigations of Lewis base amine/imine-catalyzed reactions have been systematically summarized and reviewed for the first time.

Insights into N-heterocyclic carbene and Lewis acid cooperatively catalyzed oxidative [3 + 3] annulation reactions of α,β-unsaturated aldehyde with 1,3-dicarbonyl compounds

N-Heterocyclic carbene and Lewis acid cooperatively catalyzed oxidative [3 + 3] annulation reactions of 1,3-dicarbonyl compounds have been systematically studied in theory.

Mechanism and stereoselectivity in NHC-catalyzed β-functionalization of saturated carboxylic ester

To understand the mechanism and origin of the stereoselectivity of the [3 + 2] annulation reaction between a carboxylic ester and an isatin generating spirooxindole lactone catalyzed by N-heterocyclic carbene (NHC), density functional theory (DFT) calculations have been carried out. DFT results indicate that the catalytic cycle begins with the coupling of the catalyst with benzotriazole ester, followed by α-deprotonation to produce the enolate intermediate. The subsequent 1,4-proton transfer affords the homoenolate intermediate. The next crucial step is the stereoselective C-C bond formation. Then proton transfer takes place leading to the formation of the lactone intermediate. Finally, the elimination of the catalyst furnishes the final product. The presence of 1-hydroxybenzotriazole (HOBt) dramatically accelerates the proton transfer step. More importantly, HOBt has a non-negligible impact on stereoselective C-C bond formation, and the SR-configured product is the major stereoisomer of the annulation product, which is in good agreement with the experimental observations. The differential π⋯π stacking, C-H⋯π, lone pair (LP)⋯π and repulsion interactions are found to be responsible for the stereoselectivity. The obtained mechanistic insights should provide valuable information for understanding the important roles of the NHC catalyst and HOBt additive and be helpful for designing better NHC catalysts for this kind of reaction.

Understanding the Reactivity and Selectivity of Fluxional Chiral DMAP-Catalyzed Kinetic Resolutions of Axially Chiral Biaryls

Fluxional chiral DMAP-catalyzed kinetic resolutions of axially chiral biaryls were examined using density functional theory. Computational analyses lead to a revised understanding of this reaction in which the interplay of numerous non-covalent interactions control the conformation and flexibility of the active catalyst, the preferred mechanism, and the stereoselectivity. Notably, while the DMAP catalyst itself is confirmed to be highly fluxional, electrostatically driven π⋅⋅⋅π⁺ interactions render the active, acylated form of the catalyst highly rigid, explaining its pronounced stereoselectivity.

Prediction on the origin of selectivities of NHC-catalyzed asymmetric dearomatization (CADA) reactions

The mechanism and origin of selectivities of NHC-catalyzed dearomatization reaction have been theoretically studied.

Insights into highly selective ring expansion of oxaziridines under Lewis base catalysis: a DFT study

The possible mechanism and stereoselectivity of the NHC-catalyzed ring expansion reaction of oxaziridines have been theoretically studied for the first time.

Mechanistic studies on the N-heterocyclic carbene-catalyzed reaction of isatin-derived enals with hydrazones

The detailed mechanism and origin of stereoselectivity of the NHC-catalyzed annulation reaction were investigated.

An enantioselective assembly of naphthopyran via NHC-catalyzed [3 + 3] annulation of bromoenal with β-tetralone

An asymmetric assembly of naphthopyran was realized via the N-heterocyclic carbene (NHC)-catalyzed formal [3 + 3] annulation of bromoenal and β-tetralone. The key advantages of this protocol include ready availability of starting materials, mild reaction conditions, good yields.

Why electrostatically enhanced thiourea is better than Schreiner's thiourea in both catalytic activity and regioselectivity?

Electrostatically enhanced thiourea is more active and efficient than Schreiner's thiourea in the ring-opening aminolysis of styrene oxide with aniline, and the underlying reasons were explored by DFT calculations.

A mechanistic investigation into N-heterocyclic carbene (NHC) catalyzed umpolung of ketones and benzonitriles: is the cyano group better than the classical carbonyl group for the addition of NHC?

The cooperative participation of NHC-H₂O-activated cyano carbon is more preferred than the classical NHC-activated carbonyl carbon.