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Wang J, Li H, Tavakol M, Serva A, Nener B, Parish G, Salanne M, Warr GG, Voïtchovsky K, Atkin R. Ions Adsorbed at Amorphous Solid/Solution Interfaces Form Wigner Crystal-like Structures. ACS NANO 2024; 18:1181-1194. [PMID: 38117206 DOI: 10.1021/acsnano.3c11349] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/21/2023]
Abstract
When a surface is immersed in a solution, it usually acquires a charge, which attracts counterions and repels co-ions to form an electrical double layer. The ions directly adsorbed to the surface are referred to as the Stern layer. The structure of the Stern layer normal to the interface was described decades ago, but the lateral organization within the Stern layer has received scant attention. This is because instrumental limitations have prevented visualization of the ion arrangements except for atypical, model, crystalline surfaces. Here, we use high-resolution amplitude modulated atomic force microscopy (AFM) to visualize in situ the lateral structure of Stern layer ions adsorbed to polycrystalline gold, and amorphous silica and gallium nitride (GaN). For all three substrates, when the density of ions in the layer exceeds a system-dependent threshold, correlation effects induce the formation of close packed structures akin to Wigner crystals. Depending on the surface and the ions, the Wigner crystal-like structure can be hexagonally close packed, cubic, or worm-like. The influence of the electrolyte concentration, species, and valence, as well as the surface type and charge, on the Stern layer structures is described. When the system parameters are changed to reduce the Stern layer ion surface excess below the threshold value, Wigner crystal-like structures do not form and the Stern layer is unstructured. For gold surfaces, molecular dynamics (MD) simulations reveal that when sufficient potential is applied to the surface, ion clusters form with dimensions similar to the Wigner crystal-like structures in the AFM images. The lateral Stern layer structures presented, and in particular the Wigner crystal-like structures, will influence diverse applications in chemistry, energy storage, environmental science, nanotechnology, biology, and medicine.
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Affiliation(s)
- Jianan Wang
- School of Molecular Sciences, The University of Western Australia, Perth 6009, Australia
| | - Hua Li
- School of Molecular Sciences, The University of Western Australia, Perth 6009, Australia
- Centre for Microscopy, Characterisation and Analysis, The University of Western Australia, Perth 6009, Australia
| | - Mahdi Tavakol
- Department of Physics, Durham University, Durham DH1 3LE, U.K
| | - Alessandra Serva
- Sorbonne Université, CNRS, Physicochimie des Électrolytes et Nanosystèmes Interfaciaux, PHENIX, Paris F-75005, France
| | - Brett Nener
- School of Engineering, The University of Western Australia, Perth 6009, Australia
| | - Giacinta Parish
- School of Engineering, The University of Western Australia, Perth 6009, Australia
| | - Mathieu Salanne
- Sorbonne Université, CNRS, Physicochimie des Électrolytes et Nanosystèmes Interfaciaux, PHENIX, Paris F-75005, France
| | - Gregory G Warr
- School of Chemistry and Sydney Nano Institute, The University of Sydney, Sydney 2006, Australia
| | | | - Rob Atkin
- School of Molecular Sciences, The University of Western Australia, Perth 6009, Australia
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Panigrahy S, Nayar D. Differential local ordering of mixed crowders determines effective size and stability of ss-DNA capped gold nanoparticle. J Chem Phys 2024; 160:014901. [PMID: 38165098 DOI: 10.1063/5.0179238] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2023] [Accepted: 12/05/2023] [Indexed: 01/03/2024] Open
Abstract
Understanding the influence of a crowded intracellular environment on the structure and solvation of DNA functionalized gold nanoparticles (ss-DNA AuNP) is necessary for designing applications in nanomedicine. In this study, the effect of single (Gly, Ser, Lys) and mixture of amino acids (Gly+Ser, Gly+Lys, Ser+Lys) at crowded concentrations is examined on the structure of the ss-DNA AuNP using molecular dynamics simulations. Using the structural estimators such as pair correlation functions and ligand shell positional fluctuations, the solvation entropy is estimated. Combining the AuNP-solvent interaction energy with the solvation entropy estimates, the free energy of solvation of the AuNP in crowded solutions is computed. The solvation entropy favours the solvation free energy which becomes more favourable for larger effective size of AuNP in crowded solutions relative to that in water. The effective size of AuNP depends on the different propensity of the crowders to adsorb on Au surface, with the smallest crowder (Gly) having the highest propensity inducing the least effective AuNP size as compared to other single crowder solutions. In mixed crowded solutions of amino acids of variable size and chemistry, distinctive local adsorption of the crowders on the gold surface is observed that controls the additive or non-additive crowding effects which govern an increase (in Gly+Ser) or decrease (in Gly+Lys) in nanoparticle effective size respectively. The results shed light into the fundamental understanding of the influence of intracellular crowding on structure of ss-DNA AuNP and plausible employability of crowding as a tool to design programmable self-assembly of functionalized nanoparticles.
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Affiliation(s)
- Sibasankar Panigrahy
- Department of Materials Science and Engineering, Indian Institute of Technology Delhi, Hauz Khas, New Delhi 110016, India
| | - Divya Nayar
- Department of Materials Science and Engineering, Indian Institute of Technology Delhi, Hauz Khas, New Delhi 110016, India
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Janićijević Ž, Nguyen-Le TA, Alsadig A, Cela I, Žilėnaite R, Tonmoy TH, Kubeil M, Bachmann M, Baraban L. Methods gold standard in clinic millifluidics multiplexed extended gate field-effect transistor biosensor with gold nanoantennae as signal amplifiers. Biosens Bioelectron 2023; 241:115701. [PMID: 37757510 DOI: 10.1016/j.bios.2023.115701] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2023] [Revised: 08/30/2023] [Accepted: 09/20/2023] [Indexed: 09/29/2023]
Abstract
We present a portable multiplexed biosensor platform based on the extended gate field-effect transistor and demonstrate its amplified response thanks to gold nanoparticle-based bioconjugates introduced as a part of the immunoassay. The platform comprises a disposable chip hosting an array of 32 extended gate electrodes, a readout module based on a single transistor operating in constant charge mode, and a multiplexer to scan sensing electrodes one-by-one. Although employing only off-the-shelf electronic components, our platform achieves sensitivities comparable to fully customized nanofabricated potentiometric sensors. In particular, it reaches a detection limit of 0.2 fM for the pure molecular assay when sensing horseradish peroxidase-linked secondary antibody (∼0.4 nM reached by standard microplate methods). Furthermore, with the gold nanoparticle bioconjugation format, we demonstrate ca. 5-fold amplification of the potentiometric response compared to a pure molecular assay, at the detection limit of 13.3 fM. Finally, we elaborate on the mechanism of this amplification and propose that nanoparticle-mediated disruption of the diffusion barrier layer is the main contributor to the potentiometric signal enhancement. These results show the great potential of our portable, sensitive, and cost-efficient biosensor for multidimensional diagnostics in the clinical and laboratory settings, including e.g., serological tests or pathogen screening.
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Affiliation(s)
- Željko Janićijević
- Institute of Radiopharmaceutical Cancer Research, Helmholtz-Zentrum Dresden-Rossendorf, Bautzner Landstraße 400, 01328, Dresden, Germany
| | - Trang-Anh Nguyen-Le
- Institute of Radiopharmaceutical Cancer Research, Helmholtz-Zentrum Dresden-Rossendorf, Bautzner Landstraße 400, 01328, Dresden, Germany
| | - Ahmed Alsadig
- Institute of Radiopharmaceutical Cancer Research, Helmholtz-Zentrum Dresden-Rossendorf, Bautzner Landstraße 400, 01328, Dresden, Germany
| | - Isli Cela
- Institute of Radiopharmaceutical Cancer Research, Helmholtz-Zentrum Dresden-Rossendorf, Bautzner Landstraße 400, 01328, Dresden, Germany
| | - Rugilė Žilėnaite
- Institute of Radiopharmaceutical Cancer Research, Helmholtz-Zentrum Dresden-Rossendorf, Bautzner Landstraße 400, 01328, Dresden, Germany; Faculty of Chemistry and Geosciences, Institute of Chemistry, Vilnius University, Naugarduko g. 24, LT-03225, Vilnius, Lithuania
| | - Taufhik Hossain Tonmoy
- Institute of Radiopharmaceutical Cancer Research, Helmholtz-Zentrum Dresden-Rossendorf, Bautzner Landstraße 400, 01328, Dresden, Germany
| | - Manja Kubeil
- Institute of Radiopharmaceutical Cancer Research, Helmholtz-Zentrum Dresden-Rossendorf, Bautzner Landstraße 400, 01328, Dresden, Germany
| | - Michael Bachmann
- Institute of Radiopharmaceutical Cancer Research, Helmholtz-Zentrum Dresden-Rossendorf, Bautzner Landstraße 400, 01328, Dresden, Germany
| | - Larysa Baraban
- Institute of Radiopharmaceutical Cancer Research, Helmholtz-Zentrum Dresden-Rossendorf, Bautzner Landstraße 400, 01328, Dresden, Germany.
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Loche P, Scalfi L, Ali Amu M, Schullian O, Bonthuis D, Rotenberg B, Netz RR. Effects of surface rigidity and metallicity on dielectric properties and ion interactions at aqueous hydrophobic interfaces. J Chem Phys 2022; 157:094707. [DOI: 10.1063/5.0101509] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
Using classical molecular dynamics simulations we investigate the dielectric properties at interfaces of water with graphene, graphite, hexane and water vapor. For graphite we compare metallic and non-metallic versions. At the vapor-liquid water and hexane-water interfaces the laterally averaged dielectric profiles are significantly broadened due to interfacial roughness and only slightly anisotropic. In contrast, at the rigid graphene surface the dielectric profiles are strongly anisotropic and the perpendicular dielectric profile exhibits pronounced oscillations and sign changes. The interfacial dielectric excess, characterized by the shift of the dielectric-dividing-surface with respect to the Gibbs-dividing-surface, is positive for all surfaces, showing that water has an enhanced dielectric response at hydrophobic surfaces. The dielectric-dividing-surface positions vary significantly among the different surfaces, which points to pronounced surface-specific dielectric behavior. The interfacial repulsion of a chloride ion is shown to be dominated by electrostatic interactions for the soft fluid-fluid interfaces and by non-electrostatic Lennard-Jones interactions for the rigid graphene-water interface. A linear tensorial dielectric model for the ion-interface interaction with sharp dielectric interfaces located on the dielectric-dividing-surface positions works well for graphene but fails for vapor and hexane, because these interfaces are smeared out. The repulsion of chloride from the metallic and non-metallic graphite versions differs very little, which reflects the almost identical interfacial water structure and can be understood based on linear continuum dielectric theory. Interface flexibility shows up mostly in the non-linear Coulomb part of the ion-interface interaction, which changes significantly close to the interfaces and signals the breakdown of linear dielectric continuum theory.
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Affiliation(s)
| | - Laura Scalfi
- Freie Universitat Berlin Fachbereich Physik, Germany
| | | | - Otto Schullian
- Max Planck Institute of Colloids and Interfaces, Germany
| | - Douwe Bonthuis
- Institute of Theoretical and Computational Physics, Graz University of Technology Institute of Theoretical and Computational Physics, Austria
| | | | - Roland R. Netz
- Physics, Freie Universitat Berlin Fachbereich Physik, Germany
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Singh A, Singh N, Kaur N, Jang DO. Gold nanoparticles supported on ionic‐liquid‐functionalized cellulose (Au@CIL): a heterogeneous catalyst for the selective reduction of aromatic nitro compounds. Appl Organomet Chem 2022. [DOI: 10.1002/aoc.6855] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Anoop Singh
- Department of Chemistry Indian Institute of Technology Ropar Punjab India
| | - Narinder Singh
- Department of Chemistry Indian Institute of Technology Ropar Punjab India
| | - Navneet Kaur
- Department of Chemistry Panjab University Chandigarh India
| | - Doo Ok Jang
- Department of Chemistry Yonsei University Wonju Korea
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Subbotina J, Lobaskin V. Multiscale Modeling of Bio-Nano Interactions of Zero-Valent Silver Nanoparticles. J Phys Chem B 2022; 126:1301-1314. [PMID: 35132861 PMCID: PMC8859825 DOI: 10.1021/acs.jpcb.1c09525] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
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Understanding the
specifics of interaction between the protein
and nanomaterial is crucial for designing efficient, safe, and selective
nanoplatforms, such as biosensor or nanocarrier systems. Routing experimental
screening for the most suitable complementary pair of biomolecule
and nanomaterial used in such nanoplatforms might be a resource-intensive
task. While a range of computational tools are available for prescreening
libraries of proteins for their interactions with small molecular
ligands, choices for high-throughput screening of protein libraries
for binding affinities to new and existing nanomaterials are very
limited. In the current work, we present the results of the systematic
computational study of interaction of various biomolecules with pristine
zero-valent noble metal nanoparticles, namely, AgNPs, by using the UnitedAtom multiscale approach. A set of blood plasma and
dietary proteins for which the interaction with AgNPs was described
experimentally were examined computationally to evaluate the performance
of the UnitedAtom method. A set of interfacial descriptors
(log PNM, adsorption affinities, and adsorption
affinity ranking), which can characterize the relative hydrophobicity/hydrophilicity/lipophilicity
of the nanosized silver and its ability to form bio(eco)corona, was
evaluated for future use in nano-QSAR/QSPR studies.
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Affiliation(s)
- Julia Subbotina
- School of Physics, University College Dublin, Belfield, Dublin 4, Ireland
| | - Vladimir Lobaskin
- School of Physics, University College Dublin, Belfield, Dublin 4, Ireland
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Azimzadeh Sani M, Pavlopoulos NG, Pezzotti S, Serva A, Cignoni P, Linnemann J, Salanne M, Gaigeot M, Tschulik K. Unexpectedly High Capacitance of the Metal Nanoparticle/Water Interface: Molecular‐Level Insights into the Electrical Double Layer. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202112679] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Mahnaz Azimzadeh Sani
- Analytical Chemistry II Faculty of Chemistry and Biochemistry Ruhr University Bochum 44801 Bochum Germany
| | | | - Simone Pezzotti
- Physical Chemistry II Faculty of Chemistry and Biochemistry Ruhr University Bochum 44780 Bochum Germany
| | - Alessandra Serva
- Sorbonne Université CNRS Physico-chimie des Electrolytes et Nanosystèmes Interfaciaux, PHENIX 75005 Paris France
| | - Paolo Cignoni
- Analytical Chemistry II Faculty of Chemistry and Biochemistry Ruhr University Bochum 44801 Bochum Germany
| | - Julia Linnemann
- Analytical Chemistry II Faculty of Chemistry and Biochemistry Ruhr University Bochum 44801 Bochum Germany
| | - Mathieu Salanne
- Sorbonne Université CNRS Physico-chimie des Electrolytes et Nanosystèmes Interfaciaux, PHENIX 75005 Paris France
- Institut Universitaire de France (IUF) 75231 Paris Cedex 05 France
| | | | - Kristina Tschulik
- Analytical Chemistry II Faculty of Chemistry and Biochemistry Ruhr University Bochum 44801 Bochum Germany
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8
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Azimzadeh Sani M, Pavlopoulos NG, Pezzotti S, Serva A, Cignoni P, Linnemann J, Salanne M, Gaigeot M, Tschulik K. Unexpectedly High Capacitance of the Metal Nanoparticle/Water Interface: Molecular-Level Insights into the Electrical Double Layer. Angew Chem Int Ed Engl 2021; 61:e202112679. [PMID: 34796598 PMCID: PMC9300121 DOI: 10.1002/anie.202112679] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2021] [Indexed: 11/29/2022]
Abstract
The electrical double‐layer plays a key role in important interfacial electrochemical processes from catalysis to energy storage and corrosion. Therefore, understanding its structure is crucial for the progress of sustainable technologies. We extract new physico‐chemical information on the capacitance and structure of the electrical double‐layer of platinum and gold nanoparticles at the molecular level, employing single nanoparticle electrochemistry. The charge storage ability of the solid/liquid interface is larger by one order‐of‐magnitude than predicted by the traditional mean‐field models of the double‐layer such as the Gouy–Chapman–Stern model. Performing molecular dynamics simulations, we investigate the possible relationship between the measured high capacitance and adsorption strength of the water adlayer formed at the metal surface. These insights may launch the active tuning of solid–solvent and solvent–solvent interactions as an innovative design strategy to transform energy technologies towards superior performance and sustainability.
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Affiliation(s)
- Mahnaz Azimzadeh Sani
- Analytical Chemistry II Faculty of Chemistry and BiochemistryRuhr University Bochum44801BochumGermany
| | | | - Simone Pezzotti
- Physical Chemistry II Faculty of Chemistry and BiochemistryRuhr University Bochum44780BochumGermany
| | - Alessandra Serva
- Sorbonne UniversitéCNRSPhysico-chimie des Electrolytes et Nanosystèmes Interfaciaux, PHENIX75005ParisFrance
| | - Paolo Cignoni
- Analytical Chemistry II Faculty of Chemistry and BiochemistryRuhr University Bochum44801BochumGermany
| | - Julia Linnemann
- Analytical Chemistry II Faculty of Chemistry and BiochemistryRuhr University Bochum44801BochumGermany
| | - Mathieu Salanne
- Sorbonne UniversitéCNRSPhysico-chimie des Electrolytes et Nanosystèmes Interfaciaux, PHENIX75005ParisFrance
- Institut Universitaire de France (IUF)75231Paris Cedex 05France
| | | | - Kristina Tschulik
- Analytical Chemistry II Faculty of Chemistry and BiochemistryRuhr University Bochum44801BochumGermany
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