1
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Chang WJ, Roman BJ, Green AM, Truskett TM, Milliron DJ. Surface-Enhanced Infrared Absorption Spectroscopy by Resonant Vibrational Coupling with Plasmonic Metal Oxide Nanocrystals. ACS NANO 2024. [PMID: 39039957 DOI: 10.1021/acsnano.4c06145] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/24/2024]
Abstract
Coupling between plasmonic resonances and molecular vibrations in nanocrystals (NCs) offers a promising approach for detecting molecules at low concentrations and discerning their chemical identities. Metallic NC superlattices can enhance vibrational signals under far-field detection by generating a myriad of intensified electric field hot spots between the NCs. Yet, their effectiveness is limited by the fixed electron concentration dictated by the metal composition and inefficient hot spot creation due to the large mode volume. Doped metal oxide NCs, such as tin-doped indium oxide (ITO), could overcome these limitations by enabling broad tunability of resonance frequencies in the mid-infrared range through independent variation of size and doping concentration. This study investigates the potential of close-packed ITO NC monolayers for surface-enhanced infrared absorption by quantifying trends in the coupling between their plasmon modes and various molecular vibrations. We show that maximum vibrational signal intensity occurs in monolayers composed of larger, more highly doped NCs, where the plasmon resonance peak lies at higher frequency than the molecular vibration. Using finite element and mutual polarization methods, we establish that near-field enhancement is stronger on the low-frequency side of the plasmon resonance and for more strongly coupled plasmonic NCs, thus rationalizing the design rules we experimentally uncovered. Our results can guide the development of optimal metal oxide NC-based superstructures for sensing target molecules or modifying their chemical properties through vibrational coupling.
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Affiliation(s)
- Woo Je Chang
- McKetta Department of Chemical Engineering, University of Texas at Austin, Austin, Texas 78712, United States
| | - Benjamin J Roman
- McKetta Department of Chemical Engineering, University of Texas at Austin, Austin, Texas 78712, United States
| | - Allison M Green
- McKetta Department of Chemical Engineering, University of Texas at Austin, Austin, Texas 78712, United States
| | - Thomas M Truskett
- McKetta Department of Chemical Engineering, University of Texas at Austin, Austin, Texas 78712, United States
- Department of Physics, University of Texas at Austin, Austin, Texas 78712, United States
| | - Delia J Milliron
- McKetta Department of Chemical Engineering, University of Texas at Austin, Austin, Texas 78712, United States
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2
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Cohn B, Filippov T, Ber E, Chuntonov L. Spontaneous Raman scattering from vibrational polaritons is obscured by reservoir states. J Chem Phys 2023; 159:104705. [PMID: 37694751 DOI: 10.1063/5.0159666] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2023] [Accepted: 08/21/2023] [Indexed: 09/12/2023] Open
Abstract
Vibrational strong coupling results from the interaction between optically allowed molecular vibrational excitations and the resonant mode of an infrared cavity. Strong coupling leads to the formation of hybrid states, known as vibrational polaritons, which are readily observed in transmission measurements and a manifold of the reservoir states. In contrast, Raman spectroscopy of vibrational polaritons is elusive and has recently been the focus of both theoretical and experimental investigations. Because Raman measurements are frequently performed with high-numerical aperture excitation/collection optics, the angular dispersion of the strongly coupled system must be carefully considered. Herein, we experimentally investigated vibrational polaritons involving dispersive collective lattice resonances of infrared antenna arrays. Despite clear indications of the strong coupling to vibrational excitations in the transmission spectrum; we found that Raman spectra do not bear signatures of the polaritonic transitions. Detailed measurements indicate that the disappearance of the Raman signal is not due to the polariton dispersion in our samples. On the other hand, the Tavis-Cummings-Holstein model that we employed to interpret our results suggests that the ratio of the Raman transition strengths between the reservoir and the polariton states scales according to the number of strongly coupled molecules. Because the vibrational transitions are relatively weak, the number of molecules required to achieve strong coupling conditions is about 109 per unit cell of the array of infrared antennas. Therefore, the scaling predicted by the Tavis-Cummings-Holstein model can explain the absence of the polariton signatures in spontaneous Raman scattering experiments.
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Affiliation(s)
- Bar Cohn
- Schulich Faculty of Chemistry, Technion-Israel Institute of Technology, Haifa 3200003, Israel
- Solid State Institute, Technion-Israel Institute of Technology, Haifa 3200003, Israel
| | - Tikhon Filippov
- Schulich Faculty of Chemistry, Technion-Israel Institute of Technology, Haifa 3200003, Israel
| | - Emanuel Ber
- Viterbi Faculty of Electrical and Computer Engineering, and The Helen Diller Quantum Center, Technion-Israel Institute of Technology, Haifa 3200003, Israel
| | - Lev Chuntonov
- Schulich Faculty of Chemistry, Technion-Israel Institute of Technology, Haifa 3200003, Israel
- Solid State Institute, Technion-Israel Institute of Technology, Haifa 3200003, Israel
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3
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Wilcken R, Nishida J, Triana JF, John-Herpin A, Altug H, Sharma S, Herrera F, Raschke MB. Antenna-coupled infrared nanospectroscopy of intramolecular vibrational interaction. Proc Natl Acad Sci U S A 2023; 120:e2220852120. [PMID: 37155895 PMCID: PMC10193936 DOI: 10.1073/pnas.2220852120] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2022] [Accepted: 04/05/2023] [Indexed: 05/10/2023] Open
Abstract
Many photonic and electronic molecular properties, as well as chemical and biochemical reactivities are controlled by fast intramolecular vibrational energy redistribution (IVR). This fundamental ultrafast process limits coherence time in applications from photochemistry to single quantum level control. While time-resolved multidimensional IR-spectroscopy can resolve the underlying vibrational interaction dynamics, as a nonlinear optical technique it has been challenging to extend its sensitivity to probe small molecular ensembles, achieve nanoscale spatial resolution, and control intramolecular dynamics. Here, we demonstrate a concept how mode-selective coupling of vibrational resonances to IR nanoantennas can reveal intramolecular vibrational energy transfer. In time-resolved infrared vibrational nanospectroscopy, we measure the Purcell-enhanced decrease of vibrational lifetimes of molecular vibrations while tuning the IR nanoantenna across coupled vibrations. At the example of a Re-carbonyl complex monolayer, we derive an IVR rate of (25±8) cm-1 corresponding to (450±150) fs, as is typical for the fast initial equilibration between symmetric and antisymmetric carbonyl vibrations. We model the enhancement of the cross-vibrational relaxation based on intrinsic intramolecular coupling and extrinsic antenna-enhanced vibrational energy relaxation. The model further suggests an anti-Purcell effect based on antenna and laser-field-driven vibrational mode interference which can counteract IVR-induced relaxation. Nanooptical spectroscopy of antenna-coupled vibrational dynamics thus provides for an approach to probe intramolecular vibrational dynamics with a perspective for vibrational coherent control of small molecular ensembles.
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Affiliation(s)
- Roland Wilcken
- Department of Physics, and JILA, University of Colorado, Boulder, CO80309
| | - Jun Nishida
- Department of Physics, and JILA, University of Colorado, Boulder, CO80309
| | - Johan F. Triana
- Department of Physics, Universidad de Santiago de Chile, Estación Central917022, Chile
| | - Aurelian John-Herpin
- Institute of Bioengineering, École Polytechnique Fédéral de Lausanne, Lausanne1015, Switzerland
| | - Hatice Altug
- Institute of Bioengineering, École Polytechnique Fédéral de Lausanne, Lausanne1015, Switzerland
| | - Sandeep Sharma
- Department of Chemistry, University of Colorado, Boulder, CO80309
| | - Felipe Herrera
- Department of Physics, Universidad de Santiago de Chile, Estación Central917022, Chile
- Millennium Institute for Research in Optics, Concepción4030000, Chile
| | - Markus B. Raschke
- Department of Physics, and JILA, University of Colorado, Boulder, CO80309
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4
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Rutherford SH, Baker MJ, Hunt NT. 2D-IR spectroscopy of proteins in H 2O-A Perspective. J Chem Phys 2023; 158:030901. [PMID: 36681646 DOI: 10.1063/5.0129480] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022] Open
Abstract
The form of the amide I infrared absorption band provides a sensitive probe of the secondary structure and dynamics of proteins in the solution phase. However, the frequency coincidence of the amide I band with the bending vibrational mode of H2O has necessitated the widespread use of deuterated solvents. Recently, it has been demonstrated that ultrafast 2D-IR spectroscopy allows the detection of the protein amide I band in H2O-based fluids, meaning that IR methods can now be applied to study proteins in physiologically relevant solvents. In this perspective, we describe the basis of the 2D-IR method for observing the protein amide I band in H2O and show how this development has the potential to impact areas ranging from our fundamental appreciation of protein structural dynamics to new applications for 2D-IR spectroscopy in the analytical and biomedical sciences. In addition, we discuss how the spectral response of water, rather than being a hindrance, now provides a basis for new approaches to data pre-processing, standardization of 2D-IR data collection, and signal quantification. Ultimately, we visualize a direction of travel toward the creation of 2D-IR spectral libraries that can be linked to advanced computational methods for use in high-throughput protein screening and disease diagnosis.
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Affiliation(s)
- Samantha H Rutherford
- WestCHEM, Department of Pure and Applied Chemistry, University of Strathclyde, Technology and Innovation Centre, 99 George Street, Glasgow G1 1RD, United Kingdom
| | - Matthew J Baker
- School of Medicine, Faculty of Clinical Biomedical Sciences, University of Central Lancashire, Preston PR1 2HE, United Kingdom
| | - Neil T Hunt
- Department of Chemistry and York Biomedical Research Institute, University of York, York YO10 5DD, United Kingdom
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5
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Cohn B, Sufrin S, Basu A, Chuntonov L. Vibrational Polaritons in Disordered Molecular Ensembles. J Phys Chem Lett 2022; 13:8369-8375. [PMID: 36043884 PMCID: PMC9465717 DOI: 10.1021/acs.jpclett.2c02341] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2022] [Accepted: 08/26/2022] [Indexed: 06/12/2023]
Abstract
Disorder is an intrinsic attribute of any realistic molecular system. It is known to lead to localization, which hampers efficient transport. It was recently proposed that in molecular ensembles strongly coupled to photonic cavities, moderate disorder leads to delocalization and increases of the transport and chemical reaction rates. Vibrational polaritons involve molecular vibrations hybridized with an infrared cavity. When the coupling strength largely exceeds the molecular inhomogeneity, polaritons are unaffected by disorder. However, in many experiments, such a homogeneous limit does not apply. We investigated vibrational polaritons involving molecular ensembles with systematically modified disorder. Counterintuitively, moderate disorder leads to an increase in Rabi splitting and the modification of the polariton bandwidths. Experimental spectroscopic data agree with a Tavis-Cummings-like model that suggests enhanced delocalization of the reservoir states occurs via the admixture of the cavity mode. Our results provide new insights into the paradigm of disorder-induced cavity-assisted delocalization in molecular polaritons.
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Affiliation(s)
- Bar Cohn
- Schulich
Faculty of Chemistry, Solid State Institute, Faculty of Mechanical Engineering, Technion−Israel Institute of Technology, Haifa 3200003, Israel
| | - Shmuel Sufrin
- Schulich
Faculty of Chemistry, Solid State Institute, Faculty of Mechanical Engineering, Technion−Israel Institute of Technology, Haifa 3200003, Israel
| | - Arghyadeep Basu
- Schulich
Faculty of Chemistry, Solid State Institute, Faculty of Mechanical Engineering, Technion−Israel Institute of Technology, Haifa 3200003, Israel
| | - Lev Chuntonov
- Schulich
Faculty of Chemistry, Solid State Institute, Faculty of Mechanical Engineering, Technion−Israel Institute of Technology, Haifa 3200003, Israel
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6
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Cohn B, Sufrin S, Chuntonov L. Ultrafast vibrational excitation transfer on resonant antenna lattices revealed by two-dimensional infrared spectroscopy. J Chem Phys 2022; 156:121101. [DOI: 10.1063/5.0082161] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
Abstract
High-quality lattice resonances in arrays of infrared antennas operating in an open-cavity regime form polariton states by means of strong coupling to molecular vibrations. We studied polaritons formed by carbonyl stretching modes of (poly)methyl methacrylate on resonant antenna arrays using femtosecond 2DIR spectroscopy. At a normal incidence of excitation light, doubly degenerate antenna-lattice resonances (ALRs) form two polariton states: a lower polariton and an upper polariton. At an off-normal incidence geometry of 2DIR experiments, the ALR degeneracy is lifted and, consequently, the polariton energies are split. We spectrally resolved and tracked the time-dependent evolution of a cross-peak signal associated with the excitation of reservoir states and the unidirectional transfer of the excess energy to lower polaritons. Bi-exponential decay of the cross-peak suggests that a reversible energy exchange between the bright and dark lower polaritons occurs with a characteristic transfer time of ∼200 fs. The cross-peak signal further decays within ∼800 fs, which is consistent with the relaxation time of the carbonyl stretching vibration and with the dephasing time of the ALR. An increase in the excitation pulse intensity leads to saturation of the cross-peak amplitude and a modification of the relaxation dynamics. Using quantum-mechanical modeling, we found that the kinetic scheme that captures all the experimental observations implies that only the bright lower polariton accepts the energy from the reservoir, suggesting that transfer occurs via a mechanism involving dipole–dipole interaction. An efficient reservoir-to-polariton transfer can play an important role in developing novel room-temperature quantum optical devices in the mid-infrared wavelength region.
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Affiliation(s)
- Bar Cohn
- Schulich Faculty of Chemistry, Technion – Israel Institute of Technology, Haifa 3200003, Israel
- Solid State Institute, Technion – Israel Institute of Technology, Haifa 3200003, Israel
| | - Shmuel Sufrin
- Solid State Institute, Technion – Israel Institute of Technology, Haifa 3200003, Israel
- Faculty of Mechanical Engineering, Technion – Israel Institute of Technology, Haifa 3200003, Israel
| | - Lev Chuntonov
- Schulich Faculty of Chemistry, Technion – Israel Institute of Technology, Haifa 3200003, Israel
- Solid State Institute, Technion – Israel Institute of Technology, Haifa 3200003, Israel
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7
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Cohn B, Das K, Basu A, Chuntonov L. Infrared Open Cavities for Strong Vibrational Coupling. J Phys Chem Lett 2021; 12:7060-7066. [PMID: 34291931 DOI: 10.1021/acs.jpclett.1c01438] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Arrays of subwavelength plasmonic nanoparticles exhibiting narrowband lattice resonances are referred to as open cavities because of their ability to strongly couple with electronic excitations in molecular chromophores. However, realization of these ideas in the mid-infrared spectral region has been limited. We demonstrated a dramatic reduction in the bandwidth of lattice resonances in large-area arrays of half-wavelength mid-infrared antennas, reaching resonance quality factors above 200. By tuning the wavelength of the antenna-lattice resonances (ALR) to match the transition frequency of the molecular vibrational modes, we achieved a strong coupling between the ALR and the carbonyl stretching excitation in a thin film of (poly)methyl methacrylate (PMMA) polymer deposited on the array. Splitting of the polaritonic transitions, reduction of their bandwidth below that of the bare molecular transition, and characteristic dispersion confirmed the strong coupling regime. Our results pave the way for exciting research on the many-body correlated dynamics of vibrational polaritons.
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Affiliation(s)
- Bar Cohn
- Schulich Faculty of Chemistry and Solid State Institute, Technion - Israel Institute of Technology, Haifa 3200003, Israel
| | - Kamalika Das
- Schulich Faculty of Chemistry and Solid State Institute, Technion - Israel Institute of Technology, Haifa 3200003, Israel
| | - Arghyadeep Basu
- Schulich Faculty of Chemistry and Solid State Institute, Technion - Israel Institute of Technology, Haifa 3200003, Israel
| | - Lev Chuntonov
- Schulich Faculty of Chemistry and Solid State Institute, Technion - Israel Institute of Technology, Haifa 3200003, Israel
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8
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Chuntonov L, Rubtsov IV. Surface-enhanced ultrafast two-dimensional vibrational spectroscopy with engineered plasmonic nano-antennas. J Chem Phys 2020; 153:050902. [DOI: 10.1063/5.0013956] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Lev Chuntonov
- Schulich Faculty of Chemistry and Solid State Institute, Technion – Israel Institute of Technology, Haifa 3200003, Israel
| | - Igor V. Rubtsov
- Department of Chemistry, Tulane University, New Orleans, Louisiana 70118, USA
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9
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Tek G, Hamm P. A Correction Scheme for Fano Line Shapes in Two-Dimensional Infrared Spectroscopy. J Phys Chem Lett 2020; 11:6185-6190. [PMID: 32659094 DOI: 10.1021/acs.jpclett.0c01752] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
The asymmetry of Fano line shapes observed for metal-adsorbate systems is reflected in two-dimensional infrared (2D IR) spectroscopy as a distorted spectrum. A phenomenological correction scheme is proposed that transforms distorted 2D IR spectra into conventional spectra. To that end, a phase correction factor is first derived from the IR absorption spectrum of the sample by symmetrizing the asymmetric line shape and subsequently applied to the distorted 2D IR spectra. The concept is illustrated for a model system consisting of an organic molecule (p-mercaptobenzonitrile) adsorbed on a sputter-coated metal layer (Au). The correction scheme reveals conventional, easily interpretable 2D IR spectra.
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Affiliation(s)
- Gökçen Tek
- Department of Chemistry, University of Zurich, CH-8057 Zurich, Switzerland
| | - Peter Hamm
- Department of Chemistry, University of Zurich, CH-8057 Zurich, Switzerland
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10
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Sun Z, Fang Y. Hot-carrier generation from plasmons in an antenna-spacer-mirror nanostructure. OPTICS LETTERS 2020; 45:4357-4360. [PMID: 32735298 DOI: 10.1364/ol.400049] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2020] [Accepted: 07/06/2020] [Indexed: 06/11/2023]
Abstract
By introducing Au-nanodisk antennas, we conveniently got hot carriers from decay of surface plasmons (SPs) on planar interface in an Au-antennas/TiO2-spacer/Au-mirror (ASM) structure without an additional phase-matching process for SP generation. The presence of hot carriers from SPs is distinguished by opposite photocurrents compared with a similar structure without an Au mirror. Analyzed by extinction spectra and electrodynamics simulations, reflection between an Au nanodisk layer and an Au mirror induces an optical response of cavity mode, which excites SPs on an Au-mirror interface and significantly enhances the light harvesting, thus leading to a relatively high hot-carrier density from SP decay. The peak of incident photon-to-electron conversion efficiencies at different wavelength also well matches the optical response of the structure.
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11
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Metzger B, Muller E, Nishida J, Pollard B, Hentschel M, Raschke MB. Purcell-Enhanced Spontaneous Emission of Molecular Vibrations. PHYSICAL REVIEW LETTERS 2019; 123:153001. [PMID: 31702318 DOI: 10.1103/physrevlett.123.153001] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/25/2019] [Revised: 06/24/2019] [Indexed: 06/10/2023]
Abstract
Infrared (IR) spectroscopy of molecular vibrations provides insight into molecular structure, coupling, and dynamics. However, picosecond scale intermolecular and intramolecular many-body interactions, nonradiative relaxation, absorption, and thermalization typically dominate over IR spontaneous emission. We demonstrate how coupling to a resonant IR antenna can enhance spontaneous emission of molecular vibrations. Using time-domain nanoprobe spectroscopy we observe an up to 50% decrease in vibrational dephasing time T_{2,vib}, based on the coupling-induced population decay with T_{κ}≃550 fs and an associated Purcell factor of >10^{6}. This rate enhancement of the spontaneous emission of antenna-coupled molecular vibrations opens new avenues for IR coherent control, quantum information processing, and quantum chemistry.
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Affiliation(s)
- Bernd Metzger
- Department of Physics, Department of Chemistry, and JILA, University of Colorado at Boulder, Colorado 80309, USA
| | - Eric Muller
- Department of Physics, Department of Chemistry, and JILA, University of Colorado at Boulder, Colorado 80309, USA
| | - Jun Nishida
- Department of Physics, Department of Chemistry, and JILA, University of Colorado at Boulder, Colorado 80309, USA
| | - Benjamin Pollard
- Department of Physics, Department of Chemistry, and JILA, University of Colorado at Boulder, Colorado 80309, USA
| | - Mario Hentschel
- 4th Physics Institute and Research Center SCoPE, University of Stuttgart, Pfaffenwaldring 57, 70569 Stuttgart, Germany
| | - Markus B Raschke
- Department of Physics, Department of Chemistry, and JILA, University of Colorado at Boulder, Colorado 80309, USA
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12
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Mackin RT, Cohn B, Chuntonov L, Rubtsov IV. Intense-field interaction regime with weak laser pulses and localized plasmonic enhancement: Reference-free demonstration by 3rd- and 5th-order infrared spectroscopies. J Chem Phys 2019; 151:121103. [DOI: 10.1063/1.5120531] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022] Open
Affiliation(s)
- Robert T. Mackin
- Department of Chemistry, Tulane University, New Orleans, Louisiana 70118, USA
| | - Bar Cohn
- Schulich Faculty of Chemistry, and Solid State Institute, Technion, Haifa, Israel
| | - Lev Chuntonov
- Schulich Faculty of Chemistry, and Solid State Institute, Technion, Haifa, Israel
| | - Igor V. Rubtsov
- Department of Chemistry, Tulane University, New Orleans, Louisiana 70118, USA
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13
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Ramos S, Thielges MC. Site-Specific 1D and 2D IR Spectroscopy to Characterize the Conformations and Dynamics of Protein Molecular Recognition. J Phys Chem B 2019; 123:3551-3566. [PMID: 30848912 DOI: 10.1021/acs.jpcb.9b00969] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
Proteins exist as ensembles of interconverting states on a complex energy landscape. A complete, molecular-level understanding of their function requires knowledge of the populated states and thus the experimental tools to characterize them. Infrared (IR) spectroscopy has an inherently fast time scale that can capture all states and their dynamics with, in principle, bond-specific spatial resolution, and 2D IR methods that provide richer information are becoming more routine. Although application of IR spectroscopy for investigation of proteins is challenged by spectral congestion, the issue can be overcome by site-specific introduction of amino acid side chains that have IR probe groups with frequency-resolved absorptions, which furthermore enables selective characterization of different locations in proteins. Here, we briefly introduce the biophysical methods and summarize the current progress toward the study of proteins. We then describe our efforts to apply site-specific 1D and 2D IR spectroscopy toward elucidation of protein conformations and dynamics to investigate their involvement in protein molecular recognition, in particular mediated by dynamic complexes: plastocyanin and its binding partner cytochrome f, cytochrome P450s and substrates or redox partners, and Src homology 3 domains and proline-rich peptide motifs. We highlight the advantages of frequency-resolved probes to characterize specific, local sites in proteins and uncover variation among different locations, as well as the advantage of the fast time scale of IR spectroscopy to detect rapidly interconverting states. In addition, we illustrate the greater insight provided by 2D methods and discuss potential routes for further advancement of the field of biomolecular 2D IR spectroscopy.
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Affiliation(s)
- Sashary Ramos
- Department of Chemistry , Indiana University , Bloomington , Indiana 47405 , United States
| | - Megan C Thielges
- Department of Chemistry , Indiana University , Bloomington , Indiana 47405 , United States
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14
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Cohn B, Engelman B, Goldner A, Chuntonov L. Two-Dimensional Infrared Spectroscopy with Local Plasmonic Fields of a Trimer Gap-Antenna Array. J Phys Chem Lett 2018; 9:4596-4601. [PMID: 30044640 DOI: 10.1021/acs.jpclett.8b01937] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Half-wavelength plasmonic antennas tuned to resonance with molecular vibrational excitations have been demonstrated to enhance 2DIR signals by multiple orders of magnitude. We design doubly degenerate in-plane plasmonic normal modes of the symmetric trimer gap-antenna, which have orthogonal dipole moments excited by light of the appropriate polarization, to localize the enhanced field into the antenna's gap. Vibrational excitations serve as sensitive probes of the plasmonic fields. 2DIR spectroscopy of thin molecular films indicates that molecules emitting enhanced signals experience an electric field with a direction independent of the excitation laser pulse polarization. Our results illustrate the trade-off between the large signal amplification in molecules close to the antenna surface by resonant plasmons, where the direction of the enhanced fields follows metal surface boundary conditions, and the associated limitations for the polarization-selective spectroscopy. The ultrafast quantum dynamics reported by the enhanced signals is not affected by its interaction with plasmonic excitation.
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