1
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Chen Y, Liu F, Sha A, Xu M, Rao Z, Zhang X. Deciphering styrene oxide tolerance mechanisms in Gluconobacter oxydans mutant strain. BIORESOURCE TECHNOLOGY 2024; 401:130674. [PMID: 38642663 DOI: 10.1016/j.biortech.2024.130674] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/14/2024] [Revised: 03/21/2024] [Accepted: 04/05/2024] [Indexed: 04/22/2024]
Abstract
Chemical production wastewater contains large amounts of organic solvents (OSs), which pose a significant threat to the environment. In this study, a 10 g·L-1 styrene oxide tolerant strain with broad-spectrum OSs tolerance was obtained via adaptive laboratory evolution. The mechanisms underlying the high OS tolerance of tolerant strain were investigated by integrating physiological, multi-omics, and genetic engineering analyses. Physiological changes are one of the main factors responsible for the high OS tolerance in mutant strains. Moreover, the P-type ATPase GOX_RS04415 and the LysR family transcriptional regulator GOX_RS04700 were also verified as critical genes for styrene oxide tolerance. The tolerance mechanisms of OSs can be used in biocatalytic chassis cell factories to synthesize compounds and degrade environmental pollutants. This study provides new insights into the mechanisms underlying the toxicological response to OS stress and offers potential targets for enhancing the solvent tolerance of G. oxydans.
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Affiliation(s)
- Yan Chen
- The Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi 214122, Jiangsu, China
| | - Fei Liu
- The Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi 214122, Jiangsu, China
| | - Aobo Sha
- The Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi 214122, Jiangsu, China
| | - Meijuan Xu
- The Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi 214122, Jiangsu, China
| | - Zhiming Rao
- The Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi 214122, Jiangsu, China
| | - Xian Zhang
- The Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, Wuxi 214122, Jiangsu, China.
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2
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Ripoll M, Soriano N, Ibarburu S, Dalies M, Mulet AP, Betancor L. Bacteria-Polymer Composite Material for Glycerol Valorization. Polymers (Basel) 2023; 15:polym15112514. [PMID: 37299313 DOI: 10.3390/polym15112514] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2023] [Revised: 05/09/2023] [Accepted: 05/10/2023] [Indexed: 06/12/2023] Open
Abstract
Bacterial immobilization is regarded as an enabling technology to improve the stability and reusability of biocatalysts. Natural polymers are often used as immobilization matrices but present certain drawbacks, such as biocatalyst leakage and loss of physical integrity upon utilization in bioprocesses. Herein, we prepared a hybrid polymeric matrix that included silica nanoparticles for the unprecedented immobilization of the industrially relevant Gluconobacter frateurii (Gfr). This biocatalyst can valorize glycerol, an abundant by-product of the biodiesel industry, into glyceric acid (GA) and dihydroxyacetone (DHA). Different concentrations of siliceous nanosized materials, such as biomimetic Si nanoparticles (SiNps) and montmorillonite (MT), were added to alginate. These hybrid materials were significantly more resistant by texture analysis and presented a more compact structure as seen by scanning electron microscopy. The preparation including 4% alginate with 4% SiNps proved to be the most resistant material, with a homogeneous distribution of the biocatalyst in the beads as seen by confocal microscopy using a fluorescent mutant of Gfr. It produced the highest amounts of GA and DHA and could be reused for up to eight consecutive 24 h reactions with no loss of physical integrity and negligible bacterial leakage. Overall, our results indicate a new approach to generating biocatalysts using hybrid biopolymer supports.
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Affiliation(s)
- Magdalena Ripoll
- Department of Biotechnology, Universidad ORT Uruguay, Mercedes 1237, Montevideo 11100, Uruguay
- Graduate Program in Chemistry, Facultad de Química, Universidad de la República, Av. Gral. Flores 2124, Montevideo 11800, Uruguay
| | - Nicolás Soriano
- Department of Biotechnology, Universidad ORT Uruguay, Mercedes 1237, Montevideo 11100, Uruguay
- Graduate Program in Chemistry, Facultad de Química, Universidad de la República, Av. Gral. Flores 2124, Montevideo 11800, Uruguay
| | - Sofía Ibarburu
- Department of Biotechnology, Universidad ORT Uruguay, Mercedes 1237, Montevideo 11100, Uruguay
| | - Malena Dalies
- Department of Biotechnology, Universidad ORT Uruguay, Mercedes 1237, Montevideo 11100, Uruguay
| | - Ana Paula Mulet
- Department of Biotechnology, Universidad ORT Uruguay, Mercedes 1237, Montevideo 11100, Uruguay
| | - Lorena Betancor
- Department of Biotechnology, Universidad ORT Uruguay, Mercedes 1237, Montevideo 11100, Uruguay
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3
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New perspectives into Gluconobacter-catalysed biotransformations. Biotechnol Adv 2023; 65:108127. [PMID: 36924811 DOI: 10.1016/j.biotechadv.2023.108127] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2022] [Revised: 03/02/2023] [Accepted: 03/08/2023] [Indexed: 03/17/2023]
Abstract
Different from other aerobic microorganisms that oxidise carbon sources to water and carbon dioxide, Gluconobacter catalyses the incomplete oxidation of various substrates with regio- and stereoselectivity. This ability, as well as its capacity to release the resulting products into the reaction media, place Gluconobacter as a privileged member of a non-model microorganism class that may boost industrial biotechnology. Knowledge of new technologies applied to Gluconobacter has been piling up in recent years. Advancements in its genetic modification, application of immobilisation tools and careful designs of the transformations, have improved productivities and stabilities of Gluconobacter strains or enabled new bioconversions for the production of valuable marketable chemicals. In this work, the latest advancements applied to Gluconobacter-catalysed biotransformations are summarised with a special focus on recent available tools to improve them. From genetic and metabolic engineering to bioreactor design, the most recent works on the topic are analysed in depth to provide a comprehensive resource not only for scientists and technologists working on/with Gluconobacter, but for the general biotechnologist.
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4
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Fedina V, Lavrova D, Dyachkova T, Pasko A, Zvonarev A, Panfilov V, Ponamoreva O, Alferov S. Polymer-Based Conductive Nanocomposites for the Development of Bioanodes Using Membrane-Bound Enzyme Systems of Bacteria Gluconobacter oxydans in Biofuel Cells. Polymers (Basel) 2023; 15:polym15051296. [PMID: 36904536 PMCID: PMC10007125 DOI: 10.3390/polym15051296] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2022] [Revised: 02/15/2023] [Accepted: 03/01/2023] [Indexed: 03/08/2023] Open
Abstract
The development of biofuel cells (BFCs) currently has high potential since these devices can be used as alternative energy sources. This work studies promising materials for biomaterial immobilization in bioelectrochemical devices based on a comparative analysis of the energy characteristics (generated potential, internal resistance, power) of biofuel cells. Bioanodes are formed by the immobilization of membrane-bound enzyme systems of Gluconobacter oxydans VKM V-1280 bacteria containing pyrroloquinolinquinone-dependent dehydrogenases into hydrogels of polymer-based composites with carbon nanotubes. Natural and synthetic polymers are used as matrices, and multi-walled carbon nanotubes oxidized in hydrogen peroxide vapor (MWCNTox) are used as fillers. The intensity ratio of two characteristic peaks associated with the presence of atoms C in the sp3 and sp2 hybridization for the pristine and oxidized materials is 0.933 and 0.766, respectively. This proves a reduced degree of MWCNTox defectiveness compared to the pristine nanotubes. MWCNTox in the bioanode composites significantly improve the energy characteristics of the BFCs. Chitosan hydrogel in composition with MWCNTox is the most promising material for biocatalyst immobilization for the development of bioelectrochemical systems. The maximum power density was 1.39 × 10-5 W/mm2, which is 2 times higher than the power of BFCs based on other polymer nanocomposites.
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Affiliation(s)
- Veronika Fedina
- Laboratory of Ecological and Medical Biotechnology, Tula State University, Friedrich Engels Street 157, 300012 Tula, Russia
| | - Daria Lavrova
- Laboratory of Ecological and Medical Biotechnology, Tula State University, Friedrich Engels Street 157, 300012 Tula, Russia
- Biotechnology Department, Tula State University, Pr. Lenina 92, 300012 Tula, Russia
| | - Tatyana Dyachkova
- Department of Technology and Methods of Nanoproducts Manufacturing, Tambov State Technical University, 106/5, Building 2, Sovetskaya Str., 392000 Tambov, Russia
| | - Anastasia Pasko
- Department of Technology and Methods of Nanoproducts Manufacturing, Tambov State Technical University, 106/5, Building 2, Sovetskaya Str., 392000 Tambov, Russia
| | - Anton Zvonarev
- G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Federal Research Center “Pushchino Scientific Centre of Biological Research”, Russian Academy of Sciences, 142290 Pushchino, Russia
| | - Victor Panfilov
- Department of Biotechnology, Mendeleev University of Chemical Technology of Russia, Miusskaya Square 9, Moscow 125047, Russia
| | - Olga Ponamoreva
- Biotechnology Department, Tula State University, Pr. Lenina 92, 300012 Tula, Russia
| | - Sergey Alferov
- Laboratory of Ecological and Medical Biotechnology, Tula State University, Friedrich Engels Street 157, 300012 Tula, Russia
- Biotechnology Department, Tula State University, Pr. Lenina 92, 300012 Tula, Russia
- Correspondence:
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5
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Tarasov S, Plekhanova Y, Kashin V, Gotovtsev P, Signore MA, Francioso L, Kolesov V, Reshetilov A. Gluconobacter Oxydans-Based MFC with PEDOT:PSS/Graphene/Nafion Bioanode for Wastewater Treatment. BIOSENSORS 2022; 12:bios12090699. [PMID: 36140084 PMCID: PMC9496339 DOI: 10.3390/bios12090699] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/29/2022] [Revised: 08/23/2022] [Accepted: 08/28/2022] [Indexed: 11/16/2022]
Abstract
Microbial fuel cells (MFCs) are a variety of bioelectrocatalytic devices that utilize the metabolism of microorganisms to generate electric energy from organic matter. This study investigates the possibility of using a novel PEDOT:PSS/graphene/Nafion composite in combination with acetic acid bacteria Gluconobacter oxydans to create a pure culture MFC capable of effective municipal wastewater treatment. The developed MFC was shown to maintain its activity for at least three weeks. The level of COD in municipal wastewater treatment was reduced by 32%; the generated power was up to 81 mW/m2 with a Coulomb efficiency of 40%. Combining the MFC with a DC/DC boost converter increased the voltage generated by two series-connected MFCs from 0.55 mV to 3.2 V. A maximum efficiency was achieved on day 8 of MFC operation and was maintained for a week; capacitors of 6800 µF capacity were fully charged in ~7 min. Thus, G. oxydans cells can become an important part of microbial consortia in MFCs used for treatment of wastewaters with reduced pH.
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Affiliation(s)
- Sergei Tarasov
- G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Center for Biological Research of the Russian Academy of Sciences, Moscow Region, 142290 Pushchino, Russia
- Correspondence:
| | - Yulia Plekhanova
- G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Center for Biological Research of the Russian Academy of Sciences, Moscow Region, 142290 Pushchino, Russia
| | - Vadim Kashin
- FSBIS V.A. Kotelnikov Institute of Radio Engineering and Electronics, Russian Academy of Sciences, 125009 Moscow, Russia
| | - Pavel Gotovtsev
- Biotechnology and Bioenergy Department, National Research Centre “Kurchatov Institute”, 123182 Moscow, Russia
- Moscow Institute of Physics and Technology (National Research University), Moscow Region, 141701 Dolgoprudny, Russia
| | - Maria Assunta Signore
- CNR IMM, Institute for Microelectronics and Microsystems, Via Monteroni, I-73100 Lecce, Italy
| | - Luca Francioso
- CNR IMM, Institute for Microelectronics and Microsystems, Via Monteroni, I-73100 Lecce, Italy
| | - Vladimir Kolesov
- FSBIS V.A. Kotelnikov Institute of Radio Engineering and Electronics, Russian Academy of Sciences, 125009 Moscow, Russia
| | - Anatoly Reshetilov
- G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Pushchino Center for Biological Research of the Russian Academy of Sciences, Moscow Region, 142290 Pushchino, Russia
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6
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Kadaoluwa Pathirannahalage SP, Meftahi N, Elbourne A, Weiss ACG, McConville CF, Padua A, Winkler DA, Costa Gomes M, Greaves TL, Le TC, Besford QA, Christofferson AJ. Systematic Comparison of the Structural and Dynamic Properties of Commonly Used Water Models for Molecular Dynamics Simulations. J Chem Inf Model 2021; 61:4521-4536. [PMID: 34406000 DOI: 10.1021/acs.jcim.1c00794] [Citation(s) in RCA: 56] [Impact Index Per Article: 18.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
Water is a unique solvent that is ubiquitous in biology and present in a variety of solutions, mixtures, and materials settings. It therefore forms the basis for all molecular dynamics simulations of biological phenomena, as well as for many chemical, industrial, and materials investigations. Over the years, many water models have been developed, and it remains a challenge to find a single water model that accurately reproduces all experimental properties of water simultaneously. Here, we report a comprehensive comparison of structural and dynamic properties of 30 commonly used 3-point, 4-point, 5-point, and polarizable water models simulated using consistent settings and analysis methods. For the properties of density, coordination number, surface tension, dielectric constant, self-diffusion coefficient, and solvation free energy of methane, models published within the past two decades consistently show better agreement with experimental values compared to models published earlier, albeit with some notable exceptions. However, no single model reproduced all experimental values exactly, highlighting the need to carefully choose a water model for a particular study, depending on the phenomena of interest. Finally, machine learning algorithms quantified the relationship between the water model force field parameters and the resulting bulk properties, providing insight into the parameter-property relationship and illustrating the challenges of developing a water model that can accurately reproduce all properties of water simultaneously.
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Affiliation(s)
- Sachini P Kadaoluwa Pathirannahalage
- School of Science, RMIT University, Melbourne, Victoria 3000, Australia.,Laboratoire de Chimie, Ecole Normale Supérieure de Lyon, CNRS, Lyon 69342, France
| | - Nastaran Meftahi
- ARC Centre of Excellence in Exciton Science, School of Science, RMIT University, Melbourne, Victoria 3000, Australia
| | - Aaron Elbourne
- School of Science, RMIT University, Melbourne, Victoria 3000, Australia
| | - Alessia C G Weiss
- Leibniz-Institut für Polymerforschung e.V., Hohe Straße 6, 01069 Dresden, Germany
| | - Chris F McConville
- School of Science, RMIT University, Melbourne, Victoria 3000, Australia.,Institute for Frontier Materials, Deakin University, Geelong, Victoria 3220, Australia
| | - Agilio Padua
- Laboratoire de Chimie, Ecole Normale Supérieure de Lyon, CNRS, Lyon 69342, France
| | - David A Winkler
- School of Biochemistry and Genetics, La Trobe Institute for Molecular Science, La Trobe University, Bundoora, Victoria 3086, Australia.,Monash Institute of Pharmaceutical Sciences, Monash University, Parkville, Victoria 3052, Australia.,School of Pharmacy, University of Nottingham, Nottingham NG7 2QL, U.K
| | | | - Tamar L Greaves
- School of Science, RMIT University, Melbourne, Victoria 3000, Australia
| | - Tu C Le
- School of Engineering, RMIT University, Melbourne, Victoria 3001, Australia
| | - Quinn A Besford
- Leibniz-Institut für Polymerforschung e.V., Hohe Straße 6, 01069 Dresden, Germany
| | - Andrew J Christofferson
- School of Science, RMIT University, Melbourne, Victoria 3000, Australia.,ARC Centre of Excellence in Exciton Science, School of Science, RMIT University, Melbourne, Victoria 3000, Australia
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7
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Impact of hydrophilic polymers in organosilica matrices on structure, stability, and biocatalytic activity of immobilized methylotrophic yeast used as biofilter bed. Enzyme Microb Technol 2021; 150:109879. [PMID: 34489032 DOI: 10.1016/j.enzmictec.2021.109879] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2021] [Revised: 07/16/2021] [Accepted: 07/25/2021] [Indexed: 01/23/2023]
Abstract
The impact of hydrophilic polymers in an organosilica matrix on the features and performance of immobilized methylotrophic yeast cells used as biocatalysts was investigated and described. Yeast cells were immobilized in a matrix made of tetraethoxysilane (TEOS) and methyltriethoxysilane (MTES) by one-step sol-gel route of synthesis in the presence of polyethylene glycol (PEG) or polyvinyl alcohol (PVA). Organosilica shells were spontaneously built around cells as a result of yeast immobilization at a TEOS to MTES ratio of 85/15 vol% and hydrophilic polymer (PEG or PVA). As a structure-directing agent, PVA produces organosilica films. Stable high-performance biocatalysts active for one year, if stored at -18 °C, have been obtained by entrapment of methylotrophic yeast cells. A trickling biofilter with and without active aeration was designed using entrapped yeast cells to treat methanol polluted wastewater. A biofilter model with active aeration could halve methanol input thus demonstrating better performance compared to treatment without active aeration.
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8
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Shaw ZL, Kuriakose S, Cheeseman S, Dickey MD, Genzer J, Christofferson AJ, Crawford RJ, McConville CF, Chapman J, Truong VK, Elbourne A, Walia S. Antipathogenic properties and applications of low-dimensional materials. Nat Commun 2021; 12:3897. [PMID: 34162835 PMCID: PMC8222221 DOI: 10.1038/s41467-021-23278-7] [Citation(s) in RCA: 32] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2020] [Accepted: 04/14/2021] [Indexed: 01/31/2023] Open
Abstract
A major health concern of the 21st century is the rise of multi-drug resistant pathogenic microbial species. Recent technological advancements have led to considerable opportunities for low-dimensional materials (LDMs) as potential next-generation antimicrobials. LDMs have demonstrated antimicrobial behaviour towards a variety of pathogenic bacterial and fungal cells, due to their unique physicochemical properties. This review provides a critical assessment of current LDMs that have exhibited antimicrobial behaviour and their mechanism of action. Future design considerations and constraints in deploying LDMs for antimicrobial applications are discussed. It is envisioned that this review will guide future design parameters for LDM-based antimicrobial applications.
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Affiliation(s)
- Z L Shaw
- School of Engineering, RMIT University, Melbourne, Australia
| | - Sruthi Kuriakose
- School of Engineering, RMIT University, Melbourne, Australia
- Functional Materials and Microsystems Research Group, MicroNano Research Facility, RMIT University, Melbourne, Australia
| | | | - Michael D Dickey
- Department of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, NC, USA
| | - Jan Genzer
- Department of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, NC, USA
| | | | | | - Chris F McConville
- Institute for Frontier Materials, Deakin University, Geelong, Victoria, 3220, Australia
| | - James Chapman
- School of Science, RMIT University, Melbourne, VIC, Australia
| | - Vi Khanh Truong
- School of Science, RMIT University, Melbourne, VIC, Australia
- Department of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, NC, USA
| | - Aaron Elbourne
- School of Science, RMIT University, Melbourne, VIC, Australia.
| | - Sumeet Walia
- School of Engineering, RMIT University, Melbourne, Australia.
- Functional Materials and Microsystems Research Group, MicroNano Research Facility, RMIT University, Melbourne, Australia.
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9
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Conformationally tuned antibacterial oligomers target the peptidoglycan of Gram-positive bacteria. J Colloid Interface Sci 2020; 580:850-862. [PMID: 32736272 DOI: 10.1016/j.jcis.2020.07.090] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2020] [Revised: 06/28/2020] [Accepted: 07/17/2020] [Indexed: 12/19/2022]
Abstract
The recent rise of antibiotic resistance amongst Staphylococcus aureus (S. aureus) populations has made treating Staph-based infections a global medical challenge. Therapies that specifically target the peptidoglycan layer of S. aureus have emerged as new treatment avenues, towards which bacteria are less likely to develop resistance. While the majority of antibacterial polymers/oligomers have the ability to disrupt bacterial membranes, the design parameters for the enhanced disruption of peptidoglycan outer layer of Gram-positive bacteria remain unclear. Here, the design of oligomeric structures with favorable conformational characteristics for improved disruption of the peptidoglycan outer layer of Gram-positive bacteria is reported. Molecular dynamics simulations were employed to inform the structure design and composition of cationic oligomers displaying collapsed and expanded conformations. The most promising diblock and triblock cationic oligomers were synthesized by photo-induced atom transfer radical polymerization (photo ATRP). Following synthesis, the diblock and triblock oligomers displayed average antibacterial activity of ~99% and ~98% for S. aureus and methicillin-resistant S. aureus (MRSA), respectively, at the highest concentrations tested. Importantly, triblock oligomers with extended conformations showed significantly higher disruption of the peptidoglycan outer layer of S. aureus compared to diblock oligomers with more collapsed conformation, as evidenced by a number of characterization techniques including scanning electron, confocal and atomic force microscopy. This work provides new insight into the structure/property relationship of antibacterial materials and advances the design of functional materials for combating the rise of drug-resistant bacteria.
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10
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Besford QA, Cavalieri F, Caruso F. Glycogen as a Building Block for Advanced Biological Materials. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2020; 32:e1904625. [PMID: 31617264 DOI: 10.1002/adma.201904625] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2019] [Revised: 08/15/2019] [Indexed: 06/10/2023]
Abstract
Biological nanoparticles found in living systems possess distinct molecular architectures and diverse functions. Glycogen is a unique biological polysaccharide nanoparticle fabricated by nature through a bottom-up approach. The biocatalytic synthesis of glycogen has evolved over time to form a nanometer-sized dendrimer-like structure (20-150 nm) with a highly branched surface and a dense core. This makes glycogen markedly different from other natural linear or branched polysaccharides and particularly attractive as a platform for biomedical applications. Glycogen is inherently biodegradable, nontoxic, and can be functionalized with diverse surface and internal motifs for enhanced biofunctional properties. Recently, there has been growing interest in glycogen as a natural alternative to synthetic polymers and nanoparticles in a range of applications. Herein, the recent literature on glycogen in the material-based sciences, including its use as a constituent in biodegradable hydrogels and fibers, drug delivery vectors, tumor targeting and penetrating nanoparticles, immunomodulators, vaccine adjuvants, and contrast agents, is reviewed. The various methods of chemical functionalization and physical assembly of glycogen nanoparticles into multicomponent nanodevices, which advance glycogen toward a functional therapeutic nanoparticle from nature and back again, are discussed in detail.
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Affiliation(s)
- Quinn A Besford
- ARC Centre of Excellence in Convergent Bio-Nano Science and Technology, and the Department of Chemical Engineering, The University of Melbourne, Parkville, Victoria, 3010, Australia
| | - Francesca Cavalieri
- ARC Centre of Excellence in Convergent Bio-Nano Science and Technology, and the Department of Chemical Engineering, The University of Melbourne, Parkville, Victoria, 3010, Australia
- Dipartimento di Scienze e Tecnologie Chimiche, Università degli Studi di Roma Tor Vergata, via della Ricerca Scientifica 1, 00133, Rome, Italy
| | - Frank Caruso
- ARC Centre of Excellence in Convergent Bio-Nano Science and Technology, and the Department of Chemical Engineering, The University of Melbourne, Parkville, Victoria, 3010, Australia
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11
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Cheeseman S, Christofferson AJ, Kariuki R, Cozzolino D, Daeneke T, Crawford RJ, Truong VK, Chapman J, Elbourne A. Antimicrobial Metal Nanomaterials: From Passive to Stimuli-Activated Applications. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2020; 7:1902913. [PMID: 32440470 PMCID: PMC7237851 DOI: 10.1002/advs.201902913] [Citation(s) in RCA: 116] [Impact Index Per Article: 29.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2019] [Revised: 01/23/2020] [Accepted: 02/22/2020] [Indexed: 05/20/2023]
Abstract
The development of antimicrobial drug resistance among pathogenic bacteria and fungi is one of the most significant health issues of the 21st century. Recently, advances in nanotechnology have led to the development of nanomaterials, particularly metals that exhibit antimicrobial properties. These metal nanomaterials have emerged as promising alternatives to traditional antimicrobial therapies. In this review, a broad overview of metal nanomaterials, their synthesis, properties, and interactions with pathogenic micro-organisms is first provided. Secondly, the range of nanomaterials that demonstrate passive antimicrobial properties are outlined and in-depth analysis and comparison of stimuli-responsive antimicrobial nanomaterials are provided, which represent the next generation of microbiocidal nanomaterials. The stimulus applied to activate such nanomaterials includes light (including photocatalytic and photothermal) and magnetic fields, which can induce magnetic hyperthermia and kinetically driven magnetic activation. Broadly, this review aims to summarize the currently available research and provide future scope for the development of metal nanomaterial-based antimicrobial technologies, particularly those that can be activated through externally applied stimuli.
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Affiliation(s)
- Samuel Cheeseman
- School of ScienceCollege of ScienceEngineering and HealthRMIT UniversityMelbourneVIC3001Australia
- Nanobiotechnology LaboratorySchool of ScienceCollege of ScienceEngineering and HealthRMIT UniversityMelbourneVIC3001Australia
| | - Andrew J. Christofferson
- School of EngineeringRMIT UniversityMelbourneVIC3001Australia
- Food Science and TechnologyBundoora CampusSchool of ScienceCollege of ScienceEngineering and HealthRMIT UniversityMelbourneVIC3086Australia
| | - Rashad Kariuki
- School of ScienceCollege of ScienceEngineering and HealthRMIT UniversityMelbourneVIC3001Australia
- Nanobiotechnology LaboratorySchool of ScienceCollege of ScienceEngineering and HealthRMIT UniversityMelbourneVIC3001Australia
| | - Daniel Cozzolino
- School of ScienceCollege of ScienceEngineering and HealthRMIT UniversityMelbourneVIC3001Australia
- Food Science and TechnologyBundoora CampusSchool of ScienceCollege of ScienceEngineering and HealthRMIT UniversityMelbourneVIC3086Australia
| | - Torben Daeneke
- School of EngineeringRMIT UniversityMelbourneVIC3001Australia
| | - Russell J. Crawford
- School of ScienceCollege of ScienceEngineering and HealthRMIT UniversityMelbourneVIC3001Australia
- Nanobiotechnology LaboratorySchool of ScienceCollege of ScienceEngineering and HealthRMIT UniversityMelbourneVIC3001Australia
| | - Vi Khanh Truong
- School of ScienceCollege of ScienceEngineering and HealthRMIT UniversityMelbourneVIC3001Australia
- Nanobiotechnology LaboratorySchool of ScienceCollege of ScienceEngineering and HealthRMIT UniversityMelbourneVIC3001Australia
| | - James Chapman
- School of ScienceCollege of ScienceEngineering and HealthRMIT UniversityMelbourneVIC3001Australia
- Nanobiotechnology LaboratorySchool of ScienceCollege of ScienceEngineering and HealthRMIT UniversityMelbourneVIC3001Australia
| | - Aaron Elbourne
- School of ScienceCollege of ScienceEngineering and HealthRMIT UniversityMelbourneVIC3001Australia
- Nanobiotechnology LaboratorySchool of ScienceCollege of ScienceEngineering and HealthRMIT UniversityMelbourneVIC3001Australia
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12
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Alegre-Requena JV, Saldías C, Inostroza-Rivera R, Díaz Díaz D. Understanding hydrogelation processes through molecular dynamics. J Mater Chem B 2019; 7:1652-1673. [DOI: 10.1039/c8tb03036g] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
Molecular dynamics (MD) is currently one of the preferred techniques employed to understand hydrogelation processes for its ability to include large amounts of atoms in computational calculations, since substantial amounts of solvent molecules are involved in gel formation.
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Affiliation(s)
| | - César Saldías
- Departamento de Química Física
- Facultad de Química y de Farmacia
- Pontificia Universidad Católica de Chile
- Macul
- Chile
| | | | - David Díaz Díaz
- Institut für Organische Chemie
- Universität Regensburg
- 93053 Regensburg
- Germany
- Instituto de Productos Naturales y Agrobiología del CSIC
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Plekhanova Y, Tarasov S, Kolesov V, Kuznetsova I, Signore M, Quaranta F, Reshetilov A. Effects of Polymer Matrices and Carbon Nanotubes on the Generation of Electric Energy in a Microbial Fuel Cell. MEMBRANES 2018; 8:E99. [PMID: 30366368 PMCID: PMC6315946 DOI: 10.3390/membranes8040099] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/24/2018] [Revised: 10/12/2018] [Accepted: 10/22/2018] [Indexed: 11/16/2022]
Abstract
The anode of a microbial fuel cell (MFC) was formed on a graphite electrode and immobilized Gluconobacter oxydans VKM-1280 bacterial cells. Immobilization was performed in chitosan, poly(vinyl alcohol) or N-vinylpyrrolidone-modified poly(vinyl alcohol). Ethanol was used as substrate. The anode was modified using multiwalled carbon nanotubes. The aim of the modification was to create a conductive network between cell lipid membranes, containing exposed pyrroloquinoline quinone (PQQ)-dependent alcoholdehydrogenases, and the electrode to facilitate electron transfer in the system. The bioelectrochemical characteristics of modified anodes at various cell/polymer ratios were assessed via current density, power density, polarization curves and impedance spectres. Microbial fuel cells based on chitosan at a matrix/cell volume ratio of 5:1 produced maximal power characteristics of the system (8.3 μW/cm²) at a minimal resistance (1111 Ohm cm²). Modification of the anode by multiwalled carbon nanotubes (MWCNT) led to a slight decrease of internal resistance (down to 1078 Ohm cm²) and to an increase of generated power density up to 10.6 μW/cm². We explored the possibility of accumulating electric energy from an MFC on a 6800-μF capacitor via a boost converter. Generated voltage was increased from 0.3 V up to 3.2 V. Accumulated energy was used to power a Clark-type biosensor and a Bluetooth transmitter with three sensors, a miniature electric motor and a light-emitting diode.
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Affiliation(s)
- Yulia Plekhanova
- FSBIS G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, Pushchino 142290, Russia.
| | - Sergei Tarasov
- FSBIS G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, Pushchino 142290, Russia.
- FSBIS V.A. Kotelnikov Institute of Radio Engineering and Electronics, Russian Academy of Sciences, Moscow 125009, Russia.
| | - Vladimir Kolesov
- FSBIS V.A. Kotelnikov Institute of Radio Engineering and Electronics, Russian Academy of Sciences, Moscow 125009, Russia.
| | - Iren Kuznetsova
- FSBIS V.A. Kotelnikov Institute of Radio Engineering and Electronics, Russian Academy of Sciences, Moscow 125009, Russia.
| | - Maria Signore
- CNR, Institute for Microelectronics and Microsystems, Via Monteroni, 73100 Lecce, Italy.
| | - Fabio Quaranta
- CNR, Institute for Microelectronics and Microsystems, Via Monteroni, 73100 Lecce, Italy.
| | - Anatoly Reshetilov
- FSBIS G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, Pushchino 142290, Russia.
- FSBIS V.A. Kotelnikov Institute of Radio Engineering and Electronics, Russian Academy of Sciences, Moscow 125009, Russia.
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