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Slattery SA, Surjuse KA, Peterson CC, Penchoff DA, Valeev EF. Economical quasi-Newton unitary optimization of electronic orbitals. Phys Chem Chem Phys 2024; 26:6557-6573. [PMID: 38329140 DOI: 10.1039/d3cp05557d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/09/2024]
Abstract
We present an efficient quasi-Newton orbital solver optimized to reduce the number of gradient evaluations and other computational steps of comparable cost. The solver optimizes orthogonal orbitals by sequences of unitary rotations generated by the (preconditioned) limited-memory Broyden-Fletcher-Goldfarb-Shanno (L-BFGS) algorithm equipped with trust-region step restriction. The low-rank structure of the L-BFGS inverse Hessian is exploited when solving the trust-region problem. The efficiency of the proposed "Quasi-Newton Unitary Optimization with Trust-Region" (QUOTR) solver is compared to that of the standard Roothaan-Hall approach accelerated by the Direct Inversion of Iterative Subspace (DIIS), and other exact and approximate Newton solvers for mean-field (Hartree-Fock and Kohn-Sham) problems.
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Affiliation(s)
| | | | - Charles C Peterson
- Office of Advanced Research Computing, University of California, Los Angeles, CA 90095, USA
| | - Deborah A Penchoff
- UT Innovative Computing Laboratory, University of Tennessee, Knoxville, TN 37996, USA
| | - Edward F Valeev
- Department of Chemistry, Virginia Tech, Blacksburg, VA 24061, USA.
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2
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Parimi A, Mosher E, Schreckenbach G. Periodic trends in trivalent actinide halides, phosphates, and arsenates. Dalton Trans 2023; 52:18035-18044. [PMID: 37987618 DOI: 10.1039/d2dt02725a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2023]
Abstract
Due to the limited abundance of the actinide elements, computational methods, for now, remain an exclusive avenue to investigate the periodic trends across the actinide series. As every actinide element can exhibit a +3-oxidation state, we have explored model systems of gas-phase actinide trihalides, phosphates, and arsenates across the series to capture the periodic trends. By doing so, we were able to capture the periodic trends down the halogen series as well, and for the first time we are reporting a study on actinide astatides. Using scalar and spin-orbit relativistic Density Functional Theory (DFT) calculations, we have explored the variations in bond lengths, bond angles, and the charges on actinides (An). Despite the use of different sets of ligands, the trends remain similar. The properties of trivalent Pa, U, Np, and Pu are nearly identical; similar ionic radii could be the reason. The actinide elements show a tendency to exhibit a pre-Pu and a post-Cm behaviour, with Am acting as a switch. This could be due to the change in the behaviour from d-f-type to f-filling/d-type at around Pu-Cm in the actinides as already proposed in the previous literature. Bond lengths in the AnX3 increase down the halide series, and the atomic charges decrease on the actinide elements.
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Affiliation(s)
- Ashutosh Parimi
- Department of Chemistry, University of Manitoba, Winnipeg, Manitoba, R3T 2N2, Canada.
| | - Emmalee Mosher
- Department of Chemistry, University of Manitoba, Winnipeg, Manitoba, R3T 2N2, Canada.
| | - Georg Schreckenbach
- Department of Chemistry, University of Manitoba, Winnipeg, Manitoba, R3T 2N2, Canada.
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3
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Evaluations of molecular modeling and machine learning for predictive capabilities in binding of lanthanum and actinium with carboxylic acids. J Radioanal Nucl Chem 2022. [DOI: 10.1007/s10967-022-08620-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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4
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Neve F. Chemistry of superheavy transition metals. J COORD CHEM 2022. [DOI: 10.1080/00958972.2022.2084394] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- Francesco Neve
- Dipartimento di Chimica e Tecnologie Chimiche, Università della Calabria, Arcavacata di Rende (CS), Italy
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5
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Watanabe E, Kasamatsu Y, Yokokita T, Hayami S, Tonai K, Ninomiya H, Kondo N, Shigekawa Y, Haba H, Kitagawa Y, Nakano M, Shinohara A. Anion-exchange Experiment of Zr, Hf, and Th in HNO3 and Quantum Chemical Study on the Nitrate Complexes toward Chemical Research on Element 104, Rf. SOLVENT EXTRACTION AND ION EXCHANGE 2021. [DOI: 10.1080/07366299.2021.2020956] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
- Eisuke Watanabe
- Graduate School of Science, Osaka University, Toyonaka, Osaka, Japan
| | | | - Takuya Yokokita
- Nishina Center for Accelerator-Based Science, RIKEN, Wako, Saitama, Japan
| | - Sho Hayami
- Graduate School of Science, Osaka University, Toyonaka, Osaka, Japan
| | - Katsuma Tonai
- Graduate School of Science, Osaka University, Toyonaka, Osaka, Japan
| | - Hidemi Ninomiya
- Graduate School of Science, Osaka University, Toyonaka, Osaka, Japan
| | - Narumi Kondo
- Graduate School of Science, Osaka University, Toyonaka, Osaka, Japan
| | - Yudai Shigekawa
- Nishina Center for Accelerator-Based Science, RIKEN, Wako, Saitama, Japan
| | - Hiromitsu Haba
- Nishina Center for Accelerator-Based Science, RIKEN, Wako, Saitama, Japan
| | - Yasutaka Kitagawa
- Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka, Japan
| | - Masayoshi Nakano
- Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka, Japan
- Institute for Molecular Science, Okazaki, Aichi, Japan
| | - Atsushi Shinohara
- Graduate School of Science, Osaka University, Toyonaka, Osaka, Japan
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6
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McCarver GA, Hinde RJ, Vogiatzis KD. Selecting Quantum-Chemical Methods for Lanthanide-Containing Molecules: A Balance between Accuracy and Efficiency. Inorg Chem 2020; 59:10492-10500. [DOI: 10.1021/acs.inorgchem.0c00808] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Gavin A. McCarver
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee 37996-1600, United States
| | - Robert J. Hinde
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee 37996-1600, United States
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7
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Chen H, Shi R, Ow H. Predicting Stability Constants for Terbium(III) Complexes with Dipicolinic Acid and 4-Substituted Dipicolinic Acid Analogues using Density Functional Theory. ACS OMEGA 2019; 4:20665-20671. [PMID: 31858052 PMCID: PMC6906780 DOI: 10.1021/acsomega.9b02851] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/03/2019] [Accepted: 11/14/2019] [Indexed: 06/10/2023]
Abstract
The relative stability constants of Tb(III) complexes exhibiting binding to a series of 4-substituted analogues of dipicolinic acid (2,6-pyridinedicarboxylic acid) (DPA) were calculated using density functional theory (DFT) with the standard thermodynamic cycle. DFT calculations showed that the strengths of the stability constants were modified by the substituents in the following (decreasing) order: -NH2 > -OH ∼ -CH2OH > -imidazole ∼ -Cl ∼ -Br ∼ -H > -F > -I, with the differences among them falling within one to two log units except for -NH2. Through population and structural analysis, we observed that the -NH2, -OH, -CH2OH, and halide substituents can donate electrons via resonance effect to the pyridine ring of DPA while inductively withdrawing electrons with different strengths, thus resulting in the different binding strengths of the 4-substituted DPAs to the Tb(III) ions. We believe that these observations possess utility not only in the ongoing development of luminescent probes for bioanalytical studies but also for more recent cross-industrial efforts to enhance reservoir surveillance capabilities using chemical tracers within the oil and gas sector.
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Affiliation(s)
- Hsieh Chen
- Aramco Services Company, Aramco Research Center—Boston, 400 Technology Square, Cambridge, Massachusetts 02139, United States
| | - Rena Shi
- Aramco Services Company, Aramco Research Center—Boston, 400 Technology Square, Cambridge, Massachusetts 02139, United States
| | - Hooisweng Ow
- Aramco Services Company, Aramco Research Center—Boston, 400 Technology Square, Cambridge, Massachusetts 02139, United States
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8
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Peterson C, Penchoff DA, Auxier JD, Hall HL. Establishing Cost-Effective Computational Models for the Prediction of Lanthanoid Binding in [Ln(NO 3)] 2+ (with Ln = La to Lu). ACS OMEGA 2019; 4:1375-1385. [PMID: 31459405 PMCID: PMC6649180 DOI: 10.1021/acsomega.8b02403] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/16/2018] [Accepted: 12/12/2018] [Indexed: 05/05/2023]
Abstract
Evaluating the efficiency of predictive methods is critical to the processes of upscaling laboratory processes to full-scale operations on an industrial scale. With regard to separation of lanthanoids, there is a considerable motivation to optimize these processes because of immediate use in nuclear fuel cycle operations, nuclear forensics applications, and rare-earth metal recovery. Efficient predictive capabilities in Gibbs free energies of reaction are essential to optimize separations and ligand design for selective binding needed for various radiochemical applications such as nuclear fuel disposition and recycling of lanthanoid fission products into useful radioisotope products. Ligand design is essential for selective binding of lanthanoids, as separating contiguous lanthanoids is challenging because of the similar behavior these elements exhibit. Modeling including electronic structure calculations of lanthanoid-containing compounds is particularly challenging because of the associated computational cost encountered with the number of electrons correlated in these systems and relativistic considerations. This study evaluates the predictive capabilities of various ab initio methods in the calculation of Gibbs free energies of reaction for [Ln(NO3)]2+ compounds (with Ln = La to Lu), as nitrates are critical in traditional separation processes utilizing nitric acid. The composite methodologies evaluated predict Gibbs free energies of reaction for [Ln(NO3)]2+ compounds within 5 kcal mol-1 in most cases from the target method [CCSD(T)-FSII/cc-pwCV∞Z-DK3+SO] at a fraction of the computational cost.
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Affiliation(s)
- Charles
C. Peterson
- Research
Information Technology Services, University
of North Texas, 225 S. Avenue B, Denton, Texas 76201, United
States
- Institute
for Nuclear Security, University of Tennessee, 1640 Cumberland Avenue, Knoxville, Tennessee 37996, United States
| | - Deborah A. Penchoff
- Institute
for Nuclear Security, University of Tennessee, 1640 Cumberland Avenue, Knoxville, Tennessee 37996, United States
| | - John D. Auxier
- Department
of Nuclear Engineering, University of Tennessee, 301 Middle Dr., Pasqua Nuclear Engineering
Bldg., Knoxville, Tennessee 37996, United States
| | - Howard L. Hall
- Institute
for Nuclear Security, University of Tennessee, 1640 Cumberland Avenue, Knoxville, Tennessee 37996, United States
- Department
of Nuclear Engineering, University of Tennessee, 301 Middle Dr., Pasqua Nuclear Engineering
Bldg., Knoxville, Tennessee 37996, United States
- Radiochemistry
Center of Excellence (RCOE), University
of Tennessee, 1508 Middle Dr., Ferris Hall, Knoxville, Tennessee 37996, United States
- Y-12
National Security Complex, Oak
Ridge, Tennessee 37830, United States
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9
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Penchoff DA, Peterson CC, Camden JP, Bradshaw JA, Auxier JD, Schweitzer GK, Jenkins DM, Harrison RJ, Hall HL. Structural Analysis of the Complexation of Uranyl, Neptunyl, Plutonyl, and Americyl with Cyclic Imide Dioximes. ACS OMEGA 2018; 3:13984-13993. [PMID: 31458094 PMCID: PMC6645112 DOI: 10.1021/acsomega.8b02068] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2018] [Accepted: 10/11/2018] [Indexed: 05/21/2023]
Abstract
Knowledge-based design of extracting agents for selective binding of actinides is essential in stock-pile stewardship, environmental remediation, separations, and nuclear fuel disposal. Robust computational protocols are critical for in depth understanding of structural properties and to further advance the design of selective ligands. In particular, rapid radiochemical separations require predictive capabilities for binding in the gas phase. This study focuses on gas-phase binding preferences of cyclic imide dioximes to uranyl, neptunyl, plutonyl, and americyl. Structural properties, electron withdrawing effects, and their effects on binding preferences are studied with natural bond-order population analysis. The aromatic amidoximes are found to have a larger electron-donation effect than the aliphatic amidoximes. It is also found that plutonyl is more electron withdrawing than uranyl, neptunyl, and americyl when bound to the cyclic imide dioximes studied.
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Affiliation(s)
- Deborah A. Penchoff
- Institute
for Nuclear Security, University of Tennessee, 1640 Cumberland Avenue, Knoxville, Tennessee 37996, United States
- Joint
Institute for Computational Sciences, Oak
Ridge National Laboratory, 1 Bethel Valley Rd., Bldg. 5100, Oak Ridge, Tennessee 37831, United States
- E-mail: (D.A.P)
| | - Charles C. Peterson
- Research
Information Technology Services, University
of North Texas, 225 S. Avenue B, Denton, Texas 76201, United
States
| | - Jon P. Camden
- Department
of Chemistry and Biochemistry, University
of Notre Dame, 251 Nieuwland Science Hall, Notre Dame, Indiana 46556, United States
| | - James A. Bradshaw
- Y-12
National Security
Complex, 602 Scarboro Rd, Oak Ridge, Tennessee 37830, United States
| | - John D. Auxier
- Department
of Nuclear Engineering, University of Tennessee, 301 Middle Dr., Pasqua Nuclear Engineering
Bldg., Knoxville, Tennessee 37996, United States
- Radiochemistry
Center of Excellence (RCOE), University
of Tennessee, 1508 Middle
Dr., Ferris Hall, Knoxville, Tennessee 37996, United States
| | - George K. Schweitzer
- Department
of Chemistry, University of Tennessee, 1420 Circle Drive, Knoxville, Tennessee 37996, United States
| | - David M. Jenkins
- Department
of Chemistry, University of Tennessee, 1420 Circle Drive, Knoxville, Tennessee 37996, United States
| | - Robert J. Harrison
- Institute
for Advanced Computational Science, Stony
Brook University, 100 Nicolls Road, Stony Brook, New York 11790, United
States
- Brookhaven
National Laboratory, Computational Science, Building 725, Upton, New York 11973, United States
- E-mail: (R.J.H.)
| | - Howard L. Hall
- Institute
for Nuclear Security, University of Tennessee, 1640 Cumberland Avenue, Knoxville, Tennessee 37996, United States
- Y-12
National Security
Complex, 602 Scarboro Rd, Oak Ridge, Tennessee 37830, United States
- Department
of Nuclear Engineering, University of Tennessee, 301 Middle Dr., Pasqua Nuclear Engineering
Bldg., Knoxville, Tennessee 37996, United States
- E-mail: (H.L.H)
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