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DaRos J, Naruse M, Mendoza JM, Nangunoori A, Smith JH, Millstone JE, Koide K. Catalysis-Based Fluorometric Method for Semiquantifying Trace Palladium in Sulfur-Containing Compounds and Ibuprofen. J Org Chem 2024; 89:8005-8010. [PMID: 38804706 PMCID: PMC11165445 DOI: 10.1021/acs.joc.4c00651] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2024] [Revised: 05/13/2024] [Accepted: 05/21/2024] [Indexed: 05/29/2024]
Abstract
Trace palladium in synthetic materials can be rapidly and inexpensively semiquantified by a catalysis-based fluorometric method that converts resorufin allyl ether to resorufin. However, whether sulfur compounds would interfere with this method has not been systematically studied. Herein, we show that although thiourea in solution interferes with quantification, sulfide, thiol, and thiocarbamate do not. The fluorometric method can also detect palladium bound to sulfur-based scavenger resin and outperform inductively coupled plasma mass spectrometry for detecting trace palladium in ibuprofen.
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Affiliation(s)
- Judey
T. DaRos
- Department of Chemistry, University
of Pittsburgh, 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
| | - Miho Naruse
- Department of Chemistry, University
of Pittsburgh, 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
| | - Jasmyne M. Mendoza
- Department of Chemistry, University
of Pittsburgh, 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
| | - Abhimanyu Nangunoori
- Department of Chemistry, University
of Pittsburgh, 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
| | - Jacob H. Smith
- Department of Chemistry, University
of Pittsburgh, 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
| | - Jill E. Millstone
- Department of Chemistry, University
of Pittsburgh, 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
| | - Kazunori Koide
- Department of Chemistry, University
of Pittsburgh, 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
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2
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Tan Y, Pierrard F, Frédérick R, Riant O. Enhancing Tsuji-Trost deallylation in living cells with an internal-nucleophile coumarin-based probe. RSC Adv 2024; 14:5492-5498. [PMID: 38352674 PMCID: PMC10862660 DOI: 10.1039/d3ra08938j] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2023] [Accepted: 01/31/2024] [Indexed: 02/16/2024] Open
Abstract
In recent years, bioorthogonal uncaging reactions have been developed to proceed efficiently under physiological conditions. However, limited progress has been made in the development of protecting groups combining stability under physiological settings with the ability to be quickly removed via bioorthogonal catalysis. Herein, we present a new water-soluble coumarin-derived probe bearing an internal nucleophilic group capable of promoting Tsuji-Trost deallylation under palladium catalysis. This probe can be cleaved by a bioorthogonal palladium complex at a faster rate than the traditional probe, namely N-Alloc-7-amino-4-methylcoumarin. As the deallylation process proved to be efficient in mammalian cells, we envision that this probe may find applications in chemical biology, bioengineering, and medicine.
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Affiliation(s)
- Yonghua Tan
- Institute of Condensed Matter and Nanosciences (IMCN), Université catholique de Louvain Louvain-la-Neuve 1348 Belgium
- Louvain Drug Research Institute (LDRI), Université catholique de Louvain Brussels B-1200 Belgium
| | - François Pierrard
- Institute of Condensed Matter and Nanosciences (IMCN), Université catholique de Louvain Louvain-la-Neuve 1348 Belgium
- Louvain Drug Research Institute (LDRI), Université catholique de Louvain Brussels B-1200 Belgium
| | - Raphaël Frédérick
- Louvain Drug Research Institute (LDRI), Université catholique de Louvain Brussels B-1200 Belgium
| | - Olivier Riant
- Institute of Condensed Matter and Nanosciences (IMCN), Université catholique de Louvain Louvain-la-Neuve 1348 Belgium
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3
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Bykov MV, Abramov ZD, Orlov TS, Pakhomova MV, Borodina TN, Smirnov VI, Suslov DS. STRUCTURE AND CATALYTIC PROPERTIES OF (ACETYLACETONATO-κ2O,O′)BIS(TRI(2-FURYL)PHOSPHINE) PALLADIUM(II) TETRAFLUOROBORATE. J STRUCT CHEM+ 2021. [DOI: 10.1134/s0022476621080072] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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4
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She M, Wang Z, Chen J, Li Q, Liu P, Chen F, Zhang S, Li J. Design strategy and recent progress of fluorescent probe for noble metal ions (Ag, Au, Pd, and Pt). Coord Chem Rev 2021. [DOI: 10.1016/j.ccr.2020.213712] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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5
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Tian L, Feng H, Dai Z, Zhang R. Resorufin-based responsive probes for fluorescence and colorimetric analysis. J Mater Chem B 2020; 9:53-79. [PMID: 33226060 DOI: 10.1039/d0tb01628d] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Abstract
The fluorescence imaging technique has attracted increasing attention in the detection of various biological molecules in situ and in real-time owing to its inherent advantages including high selectivity and sensitivity, outstanding spatiotemporal resolution and fast feedback. In the past few decades, a number of fluorescent probes have been developed for bioassays and imaging by exploiting different fluorophores. Among various fluorophores, resorufin exhibits a high fluorescence quantum yield, long excitation/emission wavelength and pronounced ability in both fluorescence and colorimetric analysis. This fluorophore has been widely utilized in the design of responsive probes specific for various bioactive species. In this review, we summarize the advances in the development of resorufin-based fluorescent probes for detecting various analytes, such as cations, anions, reactive (redox-active) sulfur species, small molecules and biological macromolecules. The chemical structures of probes, response mechanisms, detection limits and practical applications are investigated, which is followed by the discussion of recent challenges and future research perspectives. This review article is expected to promote the further development of resorufin-based responsive fluorescent probes and their biological applications.
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Affiliation(s)
- Lu Tian
- Key Laboratory of Functional Nanomaterials and Technology in Universities of Shandong, College of Chemistry and Chemical Engineering, Linyi University, Linyi 276005, P. R. China.
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6
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Williams JM, Wanner AK, Koide K. Catalysis-Based Fluorometric Method for Trace Palladium Detection with Improved Convenience. Org Process Res Dev 2020. [DOI: 10.1021/acs.oprd.0c00377] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Jessica M. Williams
- Department of Chemistry, University of Pittsburgh, 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
| | - Annelise K. Wanner
- Department of Chemistry, University of Pittsburgh, 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
| | - Kazunori Koide
- Department of Chemistry, University of Pittsburgh, 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
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7
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Pekarik V, Peskova M, Duben J, Remes M, Heger Z. Direct fluorogenic detection of palladium and platinum organometallic complexes with proteins and nucleic acids in polyacrylamide gels. Sci Rep 2020; 10:12344. [PMID: 32704011 PMCID: PMC7378192 DOI: 10.1038/s41598-020-69336-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2019] [Accepted: 07/06/2020] [Indexed: 11/09/2022] Open
Abstract
Allyl- and propargyl ethers of umbelliferone are sensitive probes for palladium and platinum, including anticancer compounds cisplatin, carboplatin and oxaliplatin, and effective for direct visualization of protein and DNA complexes with organometallic compounds in polyacrylamide gels allowing easy detection of interactions with analyzed protein or nucleic acid. Both probes can be used for fast evaluation of Pd/Pt binding to nanocarriers relevant in drug targeted therapy or specific clinically relevant target macromolecules.
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Affiliation(s)
- Vladimir Pekarik
- Institute of Physiology, Faculty of Medicine, Masaryk University, 625 00, Brno, Czech Republic. .,Central European Institute of Technology (CEITEC), Masaryk University, 625 00, Brno, Czech Republic.
| | - Marie Peskova
- Central European Institute of Technology (CEITEC), Masaryk University, 625 00, Brno, Czech Republic
| | - Jakub Duben
- Institute of Physiology, Faculty of Medicine, Masaryk University, 625 00, Brno, Czech Republic
| | - Marek Remes
- Department of Chemistry and Biochemistry, Mendel University, Zemedelska 1, 613 00, Brno, Czech Republic.,Central European Institute of Technology (CEITEC), Brno University of Technology, 621 00, Brno, Czech Republic
| | - Zbynek Heger
- Department of Chemistry and Biochemistry, Mendel University, Zemedelska 1, 613 00, Brno, Czech Republic.,Central European Institute of Technology (CEITEC), Brno University of Technology, 621 00, Brno, Czech Republic
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8
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Highly selective detection of Pd2+ ion in aqueous solutions with rhodamine-based colorimetric and fluorescent chemosensors. Talanta 2020; 210:120634. [DOI: 10.1016/j.talanta.2019.120634] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2019] [Revised: 12/03/2019] [Accepted: 12/08/2019] [Indexed: 12/22/2022]
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9
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Lukomski L, Pohorilets I, Koide K. Third-Generation Method for High-Throughput Quantification of Trace Palladium by Color or Fluorescence. Org Process Res Dev 2020. [DOI: 10.1021/acs.oprd.9b00472] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Lydia Lukomski
- Department of Chemistry, University of Pittsburgh, 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
| | - Ivanna Pohorilets
- Department of Chemistry, University of Pittsburgh, 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
| | - Kazunori Koide
- Department of Chemistry, University of Pittsburgh, 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
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10
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Pohorilets I, Tracey MP, LeClaire MJ, Moore EM, Lu G, Liu P, Koide K. Kinetics and Inverse Temperature Dependence of a Tsuji–Trost Reaction in Aqueous Buffer. ACS Catal 2019. [DOI: 10.1021/acscatal.9b03011] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Affiliation(s)
- Ivanna Pohorilets
- Department of Chemistry, University of Pittsburgh 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
| | - Matthew P. Tracey
- Department of Chemistry, University of Pittsburgh 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
| | - Michael J. LeClaire
- Department of Chemistry, University of Pittsburgh 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
| | - Emily M. Moore
- Department of Chemistry, University of Pittsburgh 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
| | - Gang Lu
- Department of Chemistry, University of Pittsburgh 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
| | - Peng Liu
- Department of Chemistry, University of Pittsburgh 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
| | - Kazunori Koide
- Department of Chemistry, University of Pittsburgh 219 Parkman Avenue, Pittsburgh, Pennsylvania 15260, United States
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11
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Saha E, Mitra J. Multistimuli-Responsive Self-Healable and Moldable Nickel(II)-Based Gels for Reversible Gas Adsorption and Palladium Sequestration via Gel-to-Gel Transformation. ACS APPLIED MATERIALS & INTERFACES 2019; 11:10718-10728. [PMID: 30807089 DOI: 10.1021/acsami.8b21606] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
We report the in situ formation of Ni-based supramolecular organogel and organic-aqueous gels using amine appended triazole ligand, having varying morphology and rheological properties. These gels are self-healable and moldable or injectable respectively depending on the absence or presence of water in the gelation medium. Our studies reveal that the formation and rupture of hydrogen bonds assisted by the solvent movement is responsible for the self-healing nature of the gels. The porous structure of the gel has been observed from the migration of dye molecules on the self-healed gel. In addition, the gels show dual function of reversible adsorption of toxic gases and sequestration of heavy metal ions, especially palladium via gel-to-gel transformation. It is imperative to stress that such transformation is extremely rare for small molecule based metallogels. The dynamic nature of Ni-Ntriazole interactions has been utilized in achieving the reversible gas/vapor responsive behavior of the metallogels, which could be suitable in developing colorimetric probes for the detection of toxic gases and heavy metal ions. Such multifunctional gels are exceptional in contemporary literature and are expected to find utility in fabricating smart multistimuli-responsive gel-based materials in the future.
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Affiliation(s)
- Ekata Saha
- CSIR-Central Salt & Marine Chemicals Research Institute , Gijubhai Badheka Marg , Bhavnagar 364002 , Gujarat , India
- Academy of Scientific and Innovative Research (AcSIR) , Ghaziabad 201002 , India
| | - Joyee Mitra
- CSIR-Central Salt & Marine Chemicals Research Institute , Gijubhai Badheka Marg , Bhavnagar 364002 , Gujarat , India
- Academy of Scientific and Innovative Research (AcSIR) , Ghaziabad 201002 , India
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12
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Balamurugan R, Liu JH, Liu BT. A review of recent developments in fluorescent sensors for the selective detection of palladium ions. Coord Chem Rev 2018. [DOI: 10.1016/j.ccr.2018.07.017] [Citation(s) in RCA: 60] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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13
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Jie X, Liu M, Peng A, Huang J, Zhang Y, Wang X, Tian Z. A new colorimetric, near-infrared fluorescent probe for rapid detection of palladium with high sensitivity and selectivity. Talanta 2018; 183:164-171. [PMID: 29567159 DOI: 10.1016/j.talanta.2018.02.019] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2017] [Revised: 01/31/2018] [Accepted: 02/06/2018] [Indexed: 01/24/2023]
Abstract
A new type of colorimetric, fluorescent palladium (Pd) probe characterized with beaconing fluorescence signal in the quiet near-infrared (NIR) region (centered ~ 717 nm), recognition response time of approximately 3 min, limit of detection (LOD) down to 5.1 ppb, and excellent recognition specificity over a wide range of interfering metal cations was developed. It is believed that the probe underwent sequential Pd0-mediated oxidative addition and reduction elimination reactions, yielding typical D-π-A molecular skeleton of the final reaction product capable of intramolecular charge transfer (ICT). The benzothiazole moiety of the probe molecular skeleton is believed to play a vital trole in shifting the beaconing fluorescence signal to the quiet NIR region and accelerating the Pd0 recognition process of the probe via the formation of the fluorescent reaction product with largely extended π-delocalization. With unique advantages, the fluorescent probe we developed will find practical applications for detecting residual Pd with concentration below the safety margin in pharmacy and biomedical engineering.
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Affiliation(s)
- Xiaoke Jie
- School of Chemistry and Chemical Engineering, University of Chinese Academy of Sciences, Beijing 100049, PR China
| | - Ming Liu
- School of Chemistry and Chemical Engineering, University of Chinese Academy of Sciences, Beijing 100049, PR China
| | - Aidong Peng
- College of Materials Science and Opto-electronic Technology, University of Chinese Academy of Sciences, Beijing 100049, PR China
| | - Jijun Huang
- College of Materials Science and Opto-electronic Technology, University of Chinese Academy of Sciences, Beijing 100049, PR China
| | - Yuanlin Zhang
- School of Chemistry and Chemical Engineering, University of Chinese Academy of Sciences, Beijing 100049, PR China
| | - Xuefei Wang
- School of Chemistry and Chemical Engineering, University of Chinese Academy of Sciences, Beijing 100049, PR China
| | - Zhiyuan Tian
- School of Chemistry and Chemical Engineering, University of Chinese Academy of Sciences, Beijing 100049, PR China.
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