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For: Tanimura Y, Ishizaki A. Modeling, calculating, and analyzing multidimensional vibrational spectroscopies. Acc Chem Res 2009;42:1270-9. [PMID: 19441802 DOI: 10.1021/ar9000444] [Citation(s) in RCA: 77] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Number Cited by Other Article(s)
1
Zhang J, Benavides-Riveros CL, Chen L. Artificial-Intelligence-Based Surrogate Solution of Dissipative Quantum Dynamics: Physics-Informed Reconstruction of the Universal Propagator. J Phys Chem Lett 2024;15:3603-3610. [PMID: 38527271 DOI: 10.1021/acs.jpclett.4c00598] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/27/2024]
2
Seliya P, Bonn M, Grechko M. Experimental Access to Mode-Specific Coupling between Quantum Molecular Vibrations and Classical Bath Modes. J Phys Chem Lett 2023;14:8630-8637. [PMID: 37728562 PMCID: PMC10544034 DOI: 10.1021/acs.jpclett.3c01974] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2023] [Accepted: 09/06/2023] [Indexed: 09/21/2023]
3
Zhao Y. The hierarchy of Davydov's Ansätze: From guesswork to numerically "exact" many-body wave functions. J Chem Phys 2023;158:080901. [PMID: 36859105 DOI: 10.1063/5.0140002] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]  Open
4
Takahashi H, Tanimura Y. Discretized hierarchical equations of motion in mixed Liouville-Wigner space for two-dimensional vibrational spectroscopies of liquid water. J Chem Phys 2023;158:044115. [PMID: 36725520 DOI: 10.1063/5.0135725] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]  Open
5
Gelin MF, Chen L, Domcke W. Equation-of-Motion Methods for the Calculation of Femtosecond Time-Resolved 4-Wave-Mixing and N-Wave-Mixing Signals. Chem Rev 2022;122:17339-17396. [PMID: 36278801 DOI: 10.1021/acs.chemrev.2c00329] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
6
Cainelli M, Borrelli R, Tanimura Y. Effect of mixed Frenkel and charge transfer states in time-gated fluorescence spectra of perylene bisimides H-aggregates: Hierarchical equations of motion approach. J Chem Phys 2022;157:084103. [DOI: 10.1063/5.0102000] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
7
Begušić T, Tao X, Blake GA, Miller TF. Equilibrium-nonequilibrium ring-polymer molecular dynamics for nonlinear spectroscopy. J Chem Phys 2022;156:131102. [PMID: 35395895 DOI: 10.1063/5.0087156] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]  Open
8
Ikeda T, Nakayama A. Collective bath coordinate mapping of "hierarchy" in hierarchical equations of motion. J Chem Phys 2022;156:104104. [DOI: 10.1063/5.0082936] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
9
Zhao Y, Sun K, Chen L, Gelin M. The hierarchy of Davydov's Ansätze and its applications. WIRES COMPUTATIONAL MOLECULAR SCIENCE 2021. [DOI: 10.1002/wcms.1589] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
10
Hartmann R, Strunz WT. Open Quantum System Response from the Hierarchy of Pure States. J Phys Chem A 2021;125:7066-7079. [PMID: 34353022 DOI: 10.1021/acs.jpca.1c03339] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
11
Chen L, Borrelli R, Shalashilin DV, Zhao Y, Gelin MF. Simulation of Time- and Frequency-Resolved Four-Wave-Mixing Signals at Finite Temperatures: A Thermo-Field Dynamics Approach. J Chem Theory Comput 2021;17:4359-4373. [PMID: 34107216 DOI: 10.1021/acs.jctc.1c00259] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
12
Jiang H, Tao X, Kammler M, Ding F, Wodtke AM, Kandratsenka A, Miller TF, Bünermann O. Small Nuclear Quantum Effects in Scattering of H and D from Graphene. J Phys Chem Lett 2021;12:1991-1996. [PMID: 33596383 DOI: 10.1021/acs.jpclett.0c02933] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
13
Tanimura Y. Numerically "exact" approach to open quantum dynamics: The hierarchical equations of motion (HEOM). J Chem Phys 2021;153:020901. [PMID: 32668942 DOI: 10.1063/5.0011599] [Citation(s) in RCA: 140] [Impact Index Per Article: 46.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]  Open
14
Cho M, Fleming GR. Two-Dimensional Electronic–Vibrational Spectroscopy Reveals Cross-Correlation between Solvation Dynamics and Vibrational Spectral Diffusion. J Phys Chem B 2020;124:11222-11235. [DOI: 10.1021/acs.jpcb.0c08959] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
15
Qin X, Hirata S. Anharmonic Phonon Dispersion in Polyethylene. J Phys Chem B 2020;124:10477-10485. [PMID: 33169996 DOI: 10.1021/acs.jpcb.0c08493] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
16
Zhang J, Borrelli R, Tanimura Y. Proton tunneling in a two-dimensional potential energy surface with a non-linear system–bath interaction: Thermal suppression of reaction rate. J Chem Phys 2020;152:214114. [DOI: 10.1063/5.0010580] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]  Open
17
Ikeda T, Scholes GD. Generalization of the hierarchical equations of motion theory for efficient calculations with arbitrary correlation functions. J Chem Phys 2020;152:204101. [DOI: 10.1063/5.0007327] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
18
Ueno S, Tanimura Y. Modeling Intermolecular and Intramolecular Modes of Liquid Water Using Multiple Heat Baths: Machine Learning Approach. J Chem Theory Comput 2020;16:2099-2108. [DOI: 10.1021/acs.jctc.9b01288] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
19
Green D, Humphries BS, Dijkstra AG, Jones GA. Quantifying non-Markovianity in underdamped versus overdamped environments and its effect on spectral lineshape. J Chem Phys 2019;151:174112. [DOI: 10.1063/1.5119300] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
20
Iwamoto Y, Tanimura Y. Open quantum dynamics of a three-dimensional rotor calculated using a rotationally invariant system-bath Hamiltonian: Linear and two-dimensional rotational spectra. J Chem Phys 2019;151:044105. [DOI: 10.1063/1.5108609] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
21
Magdău IB, Mead GJ, Blake GA, Miller TF. Interpretation of the THz-THz-Raman Spectrum of Bromoform. J Phys Chem A 2019;123:7278-7287. [DOI: 10.1021/acs.jpca.9b05165] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
22
Gottwald F, Ivanov SD, Kühn O. On computing spectral densities from classical, semiclassical, and quantum simulations. J Chem Phys 2019;150:084109. [DOI: 10.1063/1.5045293] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
23
Green D, V A Camargo F, Heisler IA, Dijkstra AG, Jones GA. Spectral Filtering as a Tool for Two-Dimensional Spectroscopy: A Theoretical Model. J Phys Chem A 2018;122:6206-6213. [PMID: 29985004 DOI: 10.1021/acs.jpca.8b03339] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
24
Local order and vibrational coupling of the C=O Stretching Mode of γ-Caprolactone in liquid binary mixtures. Sci Rep 2017;7:12182. [PMID: 28939813 PMCID: PMC5610304 DOI: 10.1038/s41598-017-12030-1] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2017] [Accepted: 09/01/2017] [Indexed: 11/08/2022]  Open
25
Gelin MF, Borrelli R, Domcke W. Efficient orientational averaging of nonlinear optical signals in multi-chromophore systems. J Chem Phys 2017;147:044114. [DOI: 10.1063/1.4996205] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]  Open
26
Wang J. Ultrafast two-dimensional infrared spectroscopy for molecular structures and dynamics with expanding wavelength range and increasing sensitivities: from experimental and computational perspectives. INT REV PHYS CHEM 2017. [DOI: 10.1080/0144235x.2017.1321856] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
27
Loring RF. Mean-trajectory approximation for electronic and vibrational-electronic nonlinear spectroscopy. J Chem Phys 2017;146:144106. [DOI: 10.1063/1.4979621] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
28
Gottwald F, Ivanov SD, Kühn O. Vibrational spectroscopy via the Caldeira-Leggett model with anharmonic system potentials. J Chem Phys 2017;144:164102. [PMID: 27131526 DOI: 10.1063/1.4946872] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
29
Sala M, Egorova D. Two-dimensional photon-echo spectroscopy at a conical intersection: A two-mode pyrazine model with dissipation. Chem Phys 2016. [DOI: 10.1016/j.chemphys.2016.08.034] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
30
Full molecular dynamics simulations of liquid water and carbon tetrachloride for two-dimensional Raman spectroscopy in the frequency domain. Chem Phys 2016. [DOI: 10.1016/j.chemphys.2016.07.002] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
31
Ito H, Tanimura Y. Simulating two-dimensional infrared-Raman and Raman spectroscopies for intermolecular and intramolecular modes of liquid water. J Chem Phys 2016;144:074201. [DOI: 10.1063/1.4941842] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]  Open
32
Martinez F, Hanna G. Mixed Quantum-Classical Simulations of Transient Absorption Pump–Probe Signals for a Photo-Induced Electron Transfer Reaction Coupled to an Inner-Sphere Vibrational Mode. J Phys Chem A 2016;120:3196-205. [DOI: 10.1021/acs.jpca.5b11727] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
33
Krčmář J, Gelin MF, Domcke W. Simulation of femtosecond two-dimensional electronic spectra of conical intersections. J Chem Phys 2015;143:074308. [PMID: 26298135 DOI: 10.1063/1.4928685] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
34
Ito H, Jo JY, Tanimura Y. Notes on simulating two-dimensional Raman and terahertz-Raman signals with a full molecular dynamics simulation approach. STRUCTURAL DYNAMICS (MELVILLE, N.Y.) 2015;2:054102. [PMID: 26798823 PMCID: PMC4711663 DOI: 10.1063/1.4932597] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/29/2015] [Accepted: 09/25/2015] [Indexed: 06/05/2023]
35
Kato A, Tanimura Y. Quantum heat transport of a two-qubit system: Interplay between system-bath coherence and qubit-qubit coherence. J Chem Phys 2015;143:064107. [DOI: 10.1063/1.4928192] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]  Open
36
Alemi M, Loring RF. Two-Dimensional Vibrational Spectroscopy of a Dissipative System with the Optimized Mean-Trajectory Approximation. J Phys Chem B 2015;119:8950-9. [PMID: 25275943 PMCID: PMC4383732 DOI: 10.1021/jp5076884] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2014] [Revised: 09/10/2014] [Indexed: 11/30/2022]
37
Gottwald F, Ivanov SD, Kühn O. Applicability of the Caldeira-Leggett Model to Vibrational Spectroscopy in Solution. J Phys Chem Lett 2015;6:2722-2727. [PMID: 26266853 DOI: 10.1021/acs.jpclett.5b00718] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
38
Gottwald F, Karsten S, Ivanov SD, Kühn O. Parametrizing linear generalized Langevin dynamics from explicit molecular dynamics simulations. J Chem Phys 2015;142:244110. [DOI: 10.1063/1.4922941] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
39
Ikeda T, Ito H, Tanimura Y. Analysis of 2D THz-Raman spectroscopy using a non-Markovian Brownian oscillator model with nonlinear system-bath interactions. J Chem Phys 2015;142:212421. [DOI: 10.1063/1.4917033] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
40
Alemi M, Loring RF. Vibrational coherence and energy transfer in two-dimensional spectra with the optimized mean-trajectory approximation. J Chem Phys 2015;142:212417. [PMID: 26049437 DOI: 10.1063/1.4916644] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]  Open
41
Tanimura Y. Real-time and imaginary-time quantum hierarchal Fokker-Planck equations. J Chem Phys 2015;142:144110. [DOI: 10.1063/1.4916647] [Citation(s) in RCA: 94] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
42
Choi JH, Cho M. Terahertz Chiroptical Spectroscopy of an α-Helical Polypeptide: A Molecular Dynamics Simulation Study. J Phys Chem B 2014;118:12837-43. [DOI: 10.1021/jp508547y] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
43
Ito H, Hasegawa T, Tanimura Y. Calculating two-dimensional THz-Raman-THz and Raman-THz-THz signals for various molecular liquids: The samplers. J Chem Phys 2014;141:124503. [PMID: 25273447 DOI: 10.1063/1.4895908] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
44
Tanimura Y. Reduced hierarchical equations of motion in real and imaginary time: Correlated initial states and thermodynamic quantities. J Chem Phys 2014;141:044114. [DOI: 10.1063/1.4890441] [Citation(s) in RCA: 121] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
45
Sarkar P, Maity AK, Shit A, Chattopadhyay S, Chaudhuri JR, Banik SK. Controlling mobility via rapidly oscillating time-periodic stimulus. Chem Phys Lett 2014. [DOI: 10.1016/j.cplett.2014.03.062] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
46
Shit A, Chattopadhyay S, Ray Chaudhuri J. Taming the escape dynamics of nonadiabatic time-periodically driven quantum dissipative system within the frame of Wigner formalism. Chem Phys 2014. [DOI: 10.1016/j.chemphys.2014.01.008] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
47
Shit A, Chattopadhyay S, Chaudhuri JR. Quantum stochastic dynamics in the presence of a time-periodic rapidly oscillating potential: nonadiabatic escape rate. J Phys Chem A 2013;117:8576-90. [PMID: 23627350 DOI: 10.1021/jp402565y] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
48
Krčmář J, Gelin MF, Domcke W. Calculation of third-order signals via driven Schrödinger equations: General results and application to electronic 2D photon echo spectroscopy. Chem Phys 2013. [DOI: 10.1016/j.chemphys.2013.01.002] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
49
Martinez F, Rekik N, Hanna G. Simulation of nonlinear optical signals via approximate solutions of the quantum–classical Liouville equation: Application to the pump–probe spectroscopy of a condensed phase electron transfer reaction. Chem Phys Lett 2013. [DOI: 10.1016/j.cplett.2013.04.018] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
50
Tanimura Y. Reduced hierarchy equations of motion approach with Drude plus Brownian spectral distribution: Probing electron transfer processes by means of two-dimensional correlation spectroscopy. J Chem Phys 2012;137:22A550. [DOI: 10.1063/1.4766931] [Citation(s) in RCA: 100] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
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