Detection, sizing, and quantitation of polyadenylated ribonucleic acid in the nanogram-picogram range

A novel effect of EGF on mRNA stability

Expression of the epidermal growth factor (EGF) receptor gene is stimulated by EGF and the phorbol ester, 4 beta-phorbol 12-myristate 13-acetate (PMA). PMA elevates EGF receptor mRNA levels in human KB epidermoid carcinoma cells, but does not significantly affect the half-life of this mRNA when its decay is examined after the addition of actinomycin D. In contrast, EGF greatly prolongs the half-life of EGF receptor mRNA suggesting a possible mechanism for the stimulatory effect of EGF on EGF receptor mRNA levels. EGF also stabilizes beta-tubulin and beta-actin mRNAs but has very little effect on the degradation of total mRNA.

Early effects of triidothyronine on the complexity of rat heart messenger RNAs

Triiodothyronine (T3), injected daily into rats, induces heart hypertrophy. In a recent work we have shown that a single T3 injection stimulates RNA synthesis and modifies the translational products of myocardial mRNAs in reticulocyte lysates, quantitatively and qualitatively. In this work we show that T3 induces small but significant changes in mRNA size distribution after 4 h and much more important changes after 18 h. It also modifies the size distribution of their poly(A) tails. We studied the early effects of this compound on mRNA complexity, using the nucleic acid hybridization technique with DNA complementary to poly(A)+ RNAs. T3, 4 h after injection, suppresses approximately 15% of the sequences, mostly among rare sequences, and increases the frequency of the abundant sequences and of the sequences of intermediary abundance. A large part of this effect disappears 18 h after the injection. It may be concluded that T3 presents an early effect on gene expression, involving changes either at the gene level or and at some post transcriptional level.

Sequence diversity of polysomal mRNAs in roots and shoots of etiolated and greened pea seedlings

The sequence complexity and abundance of polysomal mRNA populations of pea seedlings were measured using RNA excess hybridization to both single-copy DNA and complementary DNA. The estimated sequence complexity of the polysomal mRNA populations was 2.5·10(7) nucleotides or 19,400 different mRNAs of average size. Since the haploid genome size of pea was found to be 4.0·10(9) nucleotide pairs, only 0.62% of the total haploid genome of pea was transcribed into polysomal mRNA. The roots and shoots of 4-d etiolated and light-grown seedlings contained similar numbers of diverse mRNAs. The RNA excess hybridizations, using single-copy DNA enriched for sequences transcribed in either light-grown shoots or etiolated roots and single-copy DNA depleted of such sequences, indicated that at least 92% of the sequence complexity of polysomal mRNAs was identical in roots and shoots irrespective of the presence of a functional photosynthetic system. In contrast, RNA excess hybridization to complementary DNA revealed that 21% of the polysomal polyadenylated mRNA mass found in light-grown shoots was absent in etiolated roots. The kinetics of these hybridizations indicated that this was due to the appearance of a limited number of abundant mRNAs under conditions of illumination.

Preparation and characterization of mRNAs from rat heart muscle

RNA was prepared from rat heart muscle by a procedure using guanidium thiocyanate and centrifugation on a CsCl cushion. Analysis of the RNA by sucrose gradient centrifugation and electrophoresis shows that major part of it was long sized. Poly (A+) RNA was isolated with a yield of 35 micrograms/g. The average size of the poly (A) tail was 120 nucleotides. RNA was translated in a reticulocyte lysate and the efficiencies were compared with total liver and skeletal muscle RNA. The translational products of poly (A+) RNA were analyzed in a two dimensional gel. They show that many muscle specific proteins have been synthesized in vitro, which indicates that at least, part of the RNAs has remained intact.