1
|
Wall BJ, Sharma KK, O’Brien EA, Donovan A, VanVeller B. General Installation of (4 H)-Imidazolone cis-Amide Bioisosteres Along the Peptide Backbone. J Am Chem Soc 2024; 146:11648-11656. [PMID: 38629317 PMCID: PMC11062833 DOI: 10.1021/jacs.3c13825] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/02/2024]
Abstract
Imidazolones represent an important class of heterocycles present in a wide range of pharmaceuticals, metabolites, and bioactive natural products and serve as the active chromophore in green fluorescent protein. Recently, imidazolones have received attention for their ability to act as a nonaromatic amide bond bioisotere which improves pharmacological properties. Herein, we present a tandem amidine installation and cyclization with an adjacent ester to yield (4H)-imidazolone products. Using amino acid building blocks, we can access the first examples of α-chiral imidazolones that have been previously inaccessible. Additionally, our method is amenable to on-resin installation which can be seamlessly integrated into existing solid-phase peptide synthesis protocols. Finally, we show that peptide imidazolones are potent cis-amide bond surrogates that preorganize linear peptides for head-to-tail macrocyclization. This work represents the first general approach to the backbone and side-chain insertion of imidazolone bioisosteres at various positions in linear and cyclic peptides.
Collapse
Affiliation(s)
- Brendan J. Wall
- Department of Chemistry, Iowa State University, Ames, IA 50011, USA
| | | | | | - Aaron Donovan
- Department of Chemistry, Iowa State University, Ames, IA 50011, USA
| | - Brett VanVeller
- Department of Chemistry, Iowa State University, Ames, IA 50011, USA
| |
Collapse
|
2
|
Abdildinova A, Kurth MJ, Gong YD. Heterocycles as a Peptidomimetic Scaffold: Solid-Phase Synthesis Strategies. Pharmaceuticals (Basel) 2021; 14:449. [PMID: 34068671 PMCID: PMC8151782 DOI: 10.3390/ph14050449] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2021] [Revised: 05/04/2021] [Accepted: 05/07/2021] [Indexed: 12/04/2022] Open
Abstract
Peptidomimetics are a privileged class of pharmacophores that exhibit improved physicochemical and biological properties. Solid-phase synthesis is a powerful tool for gaining rapid access to libraries of molecules from small molecules to biopolymers and also is widely used for the synthesis of peptidomimetics. Small molecules including heterocycles serve as a core for hundreds of drugs, including peptidomimetic molecules. This review covers solid-phase synthesis strategies for peptidomimetics molecules based on heterocycles.
Collapse
Affiliation(s)
- Aizhan Abdildinova
- Innovative Drug Library Research Center, Department of Chemistry, College of Science, Dongguk University, 26, 3-ga, Pil-dong, Jung-gu, Seoul 04620, Korea;
| | - Mark J. Kurth
- Department of Chemistry, University of California, Davis, CA 95616, USA
| | - Young-Dae Gong
- Innovative Drug Library Research Center, Department of Chemistry, College of Science, Dongguk University, 26, 3-ga, Pil-dong, Jung-gu, Seoul 04620, Korea;
| |
Collapse
|
3
|
Jad YE, Gudimella SK, Govender T, de la Torre BG, Albericio F. Solid-Phase Synthesis of Pyrrole Derivatives through a Multicomponent Reaction Involving Lys-Containing Peptides. ACS COMBINATORIAL SCIENCE 2018; 20:187-191. [PMID: 29444402 DOI: 10.1021/acscombsci.8b00006] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
Abstract
The synthesis of pyrroles has received considerable attention because of their biological and pharmaceutical activities. Herein we describe a solid-phase multicomponent reaction that utilizes Lys as a N donor, β-nitrostyrenes, 1,3-dicarbonyl compounds, and FeCl3 as an easily accessible catalyst under microwave irradiation to afford the subsequent pyrrole derivatives in high conversions. The strategy combines three of the most powerful tools in modern synthetic chemistry: the solid-phase mode, microwave activation, and a multicomponent reaction. The excellent results in terms of rapidity, versatility, and purity obtained herein support once again that this combined strategy is efficient for gaining chemical diversity.
Collapse
Affiliation(s)
- Yahya E. Jad
- Catalysis and Peptide Research Unit, School of Health Sciences, University of KwaZulu-Natal, University Road, Westville, Durban 4001, South Africa
| | - Santosh K. Gudimella
- Catalysis and Peptide Research Unit, School of Health Sciences, University of KwaZulu-Natal, University Road, Westville, Durban 4001, South Africa
- School of Chemistry and Physics, University of KwaZulu-Natal, University Road, Westville, Durban 4001, South Africa
| | - Thavendran Govender
- Catalysis and Peptide Research Unit, School of Health Sciences, University of KwaZulu-Natal, University Road, Westville, Durban 4001, South Africa
| | - Beatriz G. de la Torre
- Catalysis and Peptide Research Unit, School of Health Sciences, University of KwaZulu-Natal, University Road, Westville, Durban 4001, South Africa
- KRISP, College of Health Sciences, University of KwaZulu-Natal, Durban 4001, South Africa
| | - Fernando Albericio
- Catalysis and Peptide Research Unit, School of Health Sciences, University of KwaZulu-Natal, University Road, Westville, Durban 4001, South Africa
- School of Chemistry and Physics, University of KwaZulu-Natal, University Road, Westville, Durban 4001, South Africa
- Department of Organic Chemistry, University of Barcelona, 08028 Barcelona, Spain
- CIBER-BBN, Networking Centre on Bioengineering, Biomaterials and Nanomedicine, Barcelona Science Park, 08028 Barcelona, Spain
| |
Collapse
|
4
|
Wangngae S, Pattarawarapan M, Phakhodee W. Ph3P/I2-Mediated Synthesis of N,N′,N″-Substituted Guanidines and 2-Iminoimidazolin-4-ones from Aryl Isothiocyanates. J Org Chem 2017; 82:10331-10340. [DOI: 10.1021/acs.joc.7b01794] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Sirilak Wangngae
- Department
of Chemistry, Faculty of Science, ‡Graduate School, §Center of Excellence in Materials
Science and Technology, and ∥Center of Excellence for Innovation in Chemistry,
Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand
| | - Mookda Pattarawarapan
- Department
of Chemistry, Faculty of Science, ‡Graduate School, §Center of Excellence in Materials
Science and Technology, and ∥Center of Excellence for Innovation in Chemistry,
Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand
| | - Wong Phakhodee
- Department
of Chemistry, Faculty of Science, ‡Graduate School, §Center of Excellence in Materials
Science and Technology, and ∥Center of Excellence for Innovation in Chemistry,
Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand
| |
Collapse
|
5
|
Prabhu G, Santhosh L, Nagendra G, Panduranga V, Sureshbabu VV. Molecular-Iodine-Mediated, Efficient One-Pot Synthesis of 2-Iminohydantoins and 2-Amino-1H-imidazol-4(5H)-ones by Cyclodeselenization of Selenourea-Tethered Amides/Peptides. ChemistrySelect 2017. [DOI: 10.1002/slct.201601858] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Girish Prabhu
- Department of Studies in Chemistry; Central College Campus; Bangalore University, Dr. B. R. Ambedkar Veedhi; Bangalore 560001 India
| | - L. Santhosh
- Department of Studies in Chemistry; Central College Campus; Bangalore University, Dr. B. R. Ambedkar Veedhi; Bangalore 560001 India
| | - G. Nagendra
- Department of Studies in Chemistry; Central College Campus; Bangalore University, Dr. B. R. Ambedkar Veedhi; Bangalore 560001 India
| | - Veladi Panduranga
- Department of Studies in Chemistry; Central College Campus; Bangalore University, Dr. B. R. Ambedkar Veedhi; Bangalore 560001 India
| | - Vommina V. Sureshbabu
- Department of Studies in Chemistry; Central College Campus; Bangalore University, Dr. B. R. Ambedkar Veedhi; Bangalore 560001 India
| |
Collapse
|
6
|
Hosamani B, Narendra N, Prabhu G, Sureshbabu VV. Synthesis of N-urethane protected amino alkyl (S-methyl)-isothiouronium compounds and carbodiimide tethered peptidomimetics: an application for guanidino and substituted guanidino peptidomimetics synthesis. RSC Adv 2014. [DOI: 10.1039/c4ra07252a] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
|
7
|
Kumar V, Rana H, Kaushik M. Novel and green protocol for the synthesis of 2-iminohydantoins. Tetrahedron Lett 2012. [DOI: 10.1016/j.tetlet.2012.09.057] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
|
8
|
Sañudo M, García-Valverde M, Marcaccini S, Torroba T. A diastereoselective synthesis of pseudopeptidic hydantoins by an Ugi/cyclization/Ugi sequence. Tetrahedron 2012. [DOI: 10.1016/j.tet.2012.01.073] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
|
9
|
El-Dahshan A, Nazir S, Ahsanullah, Ansari FL, Rademann J. Peptide-Heterocycle Chimera: New Classes of More Drug-Like Peptidomimetics by Ligations of Peptide-Bis(electrophiles) with Various Bis(nucleophiles). European J Org Chem 2010. [DOI: 10.1002/ejoc.201001206] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
|
10
|
Parallel solution phase synthesis of a library of amino acid derived 2-arylamino-[1,3,4]-oxadiazoles. Tetrahedron Lett 2008. [DOI: 10.1016/j.tetlet.2008.05.110] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
|
11
|
Dolle RE, Le Bourdonnec B, Goodman AJ, Morales GA, Salvino JM, Zhang W. Comprehensive survey of chemical libraries for drug discovery and chemical biology: 2006. ACTA ACUST UNITED AC 2007; 9:855-902. [PMID: 17877417 DOI: 10.1021/cc700111e] [Citation(s) in RCA: 75] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Roland E Dolle
- Adolor Corporation, 700 Pennsylvania Drive, Exton, Pennsylvania 19341, USA.
| | | | | | | | | | | |
Collapse
|
12
|
Gavrilyuk JI, Evindar G, Chen JY, Batey RA. Peptide-Heterocycle Hybrid Molecules: Solid-Phase-Supported Synthesis of Substituted N-Terminal 5-Aminotetrazole Peptides via Electrocyclization of Peptidic Imidoylazides. ACTA ACUST UNITED AC 2007; 9:644-51. [PMID: 17580974 DOI: 10.1021/cc060119p] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
A method for the synthesis of polypeptides modified with a tetrazole ring at the N-terminus is described. Reaction of the N-terminal amino group of solid-supported peptides with arylisothiocyanates generates thiourea intermediates, which upon treatment with Mukaiyama's reagent (2-chloro-1-methylpyridinium iodide) generate electrophilic carbodiimide functionality. Trapping by the azide anion and electrocyclization of the intermediate imidoylazide generates an aryl-substituted 5-aminotetrazole at the N-terminus of the peptide. To prevent competitive cyclization of a neighboring amide N-H into the carbodiimide, there should not be a free N-H at the [X-1] position relative to the activated carbodiimide. Protection of the N-H group at this position or incorporation of a secondary amino acid is thus required for optimal tetrazole formation. Cleavage from the resin releases the hybrid molecules incorporating a 5-aminotetrazole ring conjugated onto a peptidic fragment.
Collapse
Affiliation(s)
- Julia I Gavrilyuk
- Davenport Chemical Laboratories, Department of Chemistry, University of Toronto, 80 St. George Street, Toronto, ON, Canada M5S 3H6
| | | | | | | |
Collapse
|
13
|
Jung N, Wiehn M, Bräse S. Multifunctional Linkers for Combinatorial Solid Phase Synthesis. Top Curr Chem (Cham) 2007. [DOI: 10.1007/128_2007_118] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/10/2023]
|