Recent advances in the chemistry of hydrogen trioxide (HOOOH)

On the Short-Range Nature of Cooperativity in Hydrogen-Bonded Large Molecular Clusters

The variation in the hydrogen bond (HB) strength has considerable consequences on the physicochemical properties of molecular clusters. Such a variation mainly arises due to the cooperative/anti-cooperative networking effect of neighboring molecules connected by HBs. In the present work, we systematically study the effect of neighboring molecules on the strength of an individual HB and the respective cooperativity contribution toward each of them in a variety of molecular clusters. For this purpose, we propose a use of a small model of a large molecular cluster called the spherical shell-1 (SS1) model. This SS1 model is constructed by placingg the spheres of an appropriate radius centered on X and Y atoms of the X-H···Y HB under consideration. The molecules falling within these spheres constitute the SS1 model. Utilizing this SS1 model, the individual HB energies are calculated within the molecular tailoring approach-based framework and the results are compared with their actual counterparts. It is found that the SS1 is a reasonably good model of large molecular clusters, providing 81-99% of the total HB energy estimated using the actual molecular clusters. This in turn suggests that the maximum cooperativity contribution toward a particular HB is due to the fewer number of molecules (in the SS1 model) directly interacting with two molecules involved in its formation. We further demonstrate that the remaining part of the energy or cooperativity (∼1 to 19%) is captured by the molecules falling in the second spherical shell (SS2) centered on the hetero-atom of the molecules in the SS1 model. The effect of increasing size of a cluster on the strength of a particular HB, calculated by the SS1 model, is also investigated. The calculated value of the HB energy remains unchanged with the increase in the size of a cluster, emphasizing the short-ranged nature of the HB cooperativity in neutral molecular clusters.

Mechanistic Insights into the Oxidative Degradation of Formic and Oxalic Acids with Ozone and OH Radical. A Computational Rationale

Gas-phase and aqueous oxidations of formic and oxalic acids with ozone and OH radicals have been thoroughly examined by DFT methods. Such acids are not only important feedstocks for the iterative construction of other organic compounds but also final products generated by mineralization and advanced oxidation of higher organics. Our computational simulation unravels both common and distinctive reaction channels, albeit consistent with known H atom abstraction pathways and formation of hydropolyoxide derivatives. Notably, reactions with neutral ozone and OH radical proceed through low-energy concerted mechanisms involving asynchronous transition structures. For formic acid, carbonylic H-abstraction appears to be more favorable than the dissociative abstraction of the acid proton. Formation of long oxygen chains does not cause a significant energy penalty and highly oxygenated products are stable enough, even if subsequent decomposition releases environmentally benign side substances like O₂ and H₂O.

ReaxFF Study of Ethanol Oxidation in O2/N2 and O2/CO2 Environments at High Temperatures

The goal of this study was to investigate the reaction mechanisms linked with the oxy-fuel combustion of ethanol (C₂H₆O). The oxidation of ethanol in O₂/N₂ and O₂/CO₂ environments was examined using reactive molecular dynamics in the temperature range from 2200 to 3000 K at constant density media and O₂/fuel ratio equals to 0.5. The main reactions were examined to supply a description of the ethanol oxidation behavior, the main product distribution, and the corresponding time evolution behavior in the atomic scale. It has been noted that the oxidation of C₂H₆O was initiated mainly from the same routes in both environments generating the same main species. However, the key reaction pathways were different depending on the media. We noticed an increase of CO formation when N₂ was replaced by CO₂ molecules, increasing the net flux of the following reactions: by CO₂ + H → CO + OH and CO₂ + CHO → O═COH + CO. This work also studied the effect of increasing O₂ concentration (O₂/fuel ratio equals to 0.5, 1.0, and 2.0) in O₂/CO₂ combustion. During the simulations, high oxygenated and unstable species were detected such as carbonates and carboxyl radicals. The change of the O₂/fuel ratio from 0.5 to 2.0 lead to an increase of CO₂ formation mainly from O₂ + O═COH → CO₂ + HO₂ and O₂ + CO → CO₂ + O reactions. In addition, the increase of O₂ concentration attenuated the effect of CO₂ and could increase the occurrence of reactions that lead to flame cessation.

NDMA formation mechanisms from typical hydrazines and hydrazones during ozonation: A computational study

N-nitrosodimethylamine (NDMA) as the most frequently detected disinfection by-product has aroused widespread concern due to its unusually high carcinogenicity, however, there is still limited understanding of its formation mechanisms. In this study, the formation mechanisms of NDMA from some typical hydrazines and hydrazones with high NDMA conversion yields (60%∼90%) during ozonation, i.e., unsymmetrical dimethylhydrazine (UDMH), 1-formyl-2,2-dimethylhydrazine (FDMH), formaldehyde dimethylhydrazone (FDH) and acetone dimethylhydrazone (ADMH), were investigated by using DFT method with the M05 functional. A new NDMA formation mechanism from hydrazines during ozonation was proposed, in which the initial step is hydrogen abstraction rather than previously reported oxygen addition. For hydrazones, the C atom of the -N = C moiety in hydrazones is preferred to be attacked by ozone to generate N,N-dimethylaminonitrene (DMAN), which is an important intermediate in NDMA formation during ozonation. Moreover, the reactivity order of the following H atoms in hydrogen/hydride ion abstraction (HA) by ozone is -NH₂ > -N(CH₃)₂ > -CO-NH ∼ =C(CH₃)₂ > =CH-. Additionally, formation pathways of some experimentally detected compounds, i.e., HOOOH, HOOH and HCOH, in the ozonation of hydrazine were elucidated in this study. The results are expected to expand our understanding of NDMA formation mechanisms and ozone reaction characteristics.

Tropospheric oxidation of methyl hydrotrioxide (CH3OOOH) by hydroxyl radical

We have employed high level theoretical methods to investigate the oxidation of methyl hydrotrioxide by hydroxyl radical, which is of interest in atmospheric chemistry research. The reaction can proceed by abstraction of either the terminal hydrogen atom of OOH group producing CH3O, O2 and H2O, or one hydrogen atom of the CH3 group forming H2CO, HO2 and H2O. The rate constants for both reactions at 298 K are computed to be 4.7 × 10-11 and 2.1 × 10-12 cm3 molecule-1 s-1, respectively, that is, the abstraction of terminal hydrogen atom of the OOH group is about 22 times faster than that of a hydrogen atom of the CH3 group. The rate constant for the overall CH3OOOH + OH reaction is computed to be 4.9 × 10-11 cm3 molecule-1 s-1. Our calculations predict branching ratios between 99.0 and 93.9% for the formation of methoxy radical plus molecular oxygen and water, and between 1.0 and 6.1% for the formation of formaldehyde plus hydroperoxyl radical and water, in the 225-325 K temperature range. The lifetime of CH3OOOH in the troposphere is predicted to range from of 1.8 hours at 225 K, up to 3.9 hours at 275 K and decreasing to 0.2 hours at 310 K. CH3OOO and CH2OOOH radicals have been also investigated.

Evidence for the Formation of Ozone (or Ozone-Like Oxidants) by the Reaction of Singlet Oxygen with Amino Acids

Antibodies or some amino acids, namely, cysteine, methionine, histidine, and tryptophan, were previously reported to catalyse the conversion of singlet oxygen (1O2) to ozone (O3). The originally proposed mechanism for such biological ozone formation was that antibodies or amino acids catalyse the oxidation of water molecules by singlet oxygen to yield dihydrogen trioxide (HOOOH) as a precursor of ozone and hydrogen peroxide (H2O2). However, because HOOOH readily decomposes to form water and singlet oxygen rather than ozone and hydrogen peroxide, an alternative hypothesis has been proposed; ozone is formed due to the reaction of singlet oxygen with amino acids to form polyoxidic amino acid derivatives as ozone precursors. Evidence in support of the latter hypothesis is presented in this article, in that in the presence of singlet oxygen, methionine sulfoxide (RS(O)CH3), an oxidation product of methionine (RSCH3), was found to promote reactions that can best be attributed to the trioxidic anionic derivative RS+(OOO−)CH3 or ozone.

Participation of the Halogens in Photochemical Reactions in Natural and Treated Waters

Halide ions are ubiquitous in natural waters and wastewaters. Halogens play an important and complex role in environmental photochemical processes and in reactions taking place during photochemical water treatment. While inert to solar wavelengths, halides can be converted into radical and non-radical reactive halogen species (RHS) by sensitized photolysis and by reactions with secondary reactive oxygen species (ROS) produced through sunlight-initiated reactions in water and atmospheric aerosols, such as hydroxyl radical, ozone, and nitrate radical. In photochemical advanced oxidation processes for water treatment, RHS can be generated by UV photolysis and by reactions of halides with hydroxyl radicals, sulfate radicals, ozone, and other ROS. RHS are reactive toward organic compounds, and some reactions lead to incorporation of halogen into byproducts. Recent studies indicate that halides, or the RHS derived from them, affect the concentrations of photogenerated reactive oxygen species (ROS) and other reactive species; influence the photobleaching of dissolved natural organic matter (DOM); alter the rates and products of pollutant transformations; lead to covalent incorporation of halogen into small natural molecules, DOM, and pollutants; and give rise to certain halogen oxides of concern as water contaminants. The complex and colorful chemistry of halogen in waters will be summarized in detail and the implications of this chemistry for global biogeochemical cycling of halogen, contaminant fate in natural waters, and water purification technologies will be discussed.

Endogenous Generation of Singlet Oxygen and Ozone in Human and Animal Tissues: Mechanisms, Biological Significance, and Influence of Dietary Components

Recent studies have shown that exposing antibodies or amino acids to singlet oxygen results in the formation of ozone (or an ozone-like oxidant) and hydrogen peroxide and that human neutrophils produce both singlet oxygen and ozone during bacterial killing. There is also mounting evidence that endogenous singlet oxygen production may be a common occurrence in cells through various mechanisms. Thus, the ozone-producing combination of singlet oxygen and amino acids might be a common cellular occurrence. This paper reviews the potential pathways of formation of singlet oxygen and ozone in vivo and also proposes some new pathways for singlet oxygen formation. Physiological consequences of the endogenous formation of these oxidants in human tissues are discussed, as well as examples of how dietary factors may promote or inhibit their generation and activity.

Comparison of the directionality of the halogen, hydrogen, and lithium bonds between HOOOH and XF (X = Cl, Br, H, Li)

Detailed electrostatic potential (ESP) analyses were performed to compare the directionality of halogen bonds with those of hydrogen bonds and lithium bonds. To do this, the interactions of HOOOH with the molecules XF (X = Cl, Br, H, Li) were investigated. For each molecule, the percentage of the van der Waals (vdW) molecular surface that intersected with the ESP surface was used to roughly quantify the directionality of the halogen/hydrogen/lithium bond associated with the molecule. The size of the region of intersection was found to increase in the following order: ClF < BrF < HF < LiF. The maximum ESP in the region of intersection, V S, max, was observed to become more positive according to the sequence ClF < BrF < HF < LiF. For ClF and BrF, the positive electrostatic potential was concentrated in a very small region of the vdW molecular surface. On the other hand, for HF and LiF, the positive electrostatic potential was more diffusely scattered across the vdW surface than for ClF and BrF. Also, the optimized geometries of the dipolymers HOOOH··· XF (X = Cl, Br, H, Li) indicated that halogen bonds are more directional than hydrogen bonds and lithium bonds, consistent with the results of ESP analyses.

Alternatives to the 'water oxidation pathway' of biological ozone formation

Recent studies have shown that ozone (O3) is endogenously generated in living tissues, where it makes both positive and negative physiological contributions. A pathway for the formation of both O3 and hydrogen peroxide (H2O2) was previously proposed, beginning with the antibody or amino acid-catalyzed oxidation of water by singlet oxygen ((1)O2) to form hydrogen trioxide (H2O3) as a key intermediate. A key pillar of this hypothesis is that some of the H2O2 molecules incorporate water-derived oxygen atoms. However, H2O3 decomposes extremely readily in water to form (1)O2 and water, rather than O3 and H2O2. This article highlights key literature indicating that the oxidation of organic molecules such as the amino acids methionine, tryptophan, histidine, and cysteine by (1)O2 is involved in ozone formation. Based on this, an alternative hypothesis for ozone formation is developed involving a further reaction of singlet oxygen with various oxidized organic intermediates. H2O2 having water-derived oxygen atoms is subsequently formed during ozone decomposition in water by known reactions.

Is HO3− multiple-minimum and floppy? Covalent to van der Waals isomerization and bond rupture of a peculiar anion

The HO₃⁻ anion is multiple-minimum and floppy: the two main isomers and isomerization barrier all lie quite below dissociation.