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Meelua W, Wanjai T, Jitonnom J. Computational evaluation of zirconocene catalysts for ε-caprolactone cationic ring-opening polymerization. Sci Rep 2024; 14:3952. [PMID: 38368433 PMCID: PMC10874422 DOI: 10.1038/s41598-024-54157-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2023] [Accepted: 02/09/2024] [Indexed: 02/19/2024] Open
Abstract
This quantum chemical study presents the ligand effect and a structure-property relationship in the cationic ring-opening polymerization (CROP) of ε-caprolactone using zirconocene catalysts. We first examined the effects of catalyst structure on the initiation and chain propagation steps of the CROP process. A total of 54 catalyst structures were investigated to understand the influence of the ligand structure on the stability of the catalyst-monomer complex and polymerization activity. The properties of the catalysts were analyzed in terms of ancillary ligands, ligand substituents, and bridging units. Calculations showed that the polymerization follows a proposed cationic mechanism, with ring opening occurring via alkyl-bond cleavage. A correlation between complex stability and activation energy was also observed, with ligand substituents dominating in both steps. While the ancillary ligands directly affect the HOMO energy level, the bridges are mainly responsible for the catalyst geometries, resulting in reduced complex stability and higher activation energy for the propagation step. This study contributes to a better understanding of the structural characteristics of zirconocene catalysts, which offers guidance for improving CROP activities in lactone polymerization.
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Affiliation(s)
- Wijitra Meelua
- Demonstration School, University of Phayao, Phayao, 56000, Thailand
- Unit of Excellence in Computational Molecular Science and Catalysis, and Division of Chemistry, School of Science, University of Phayao, Phayao, 56000, Thailand
| | - Tanchanok Wanjai
- Unit of Excellence in Computational Molecular Science and Catalysis, and Division of Chemistry, School of Science, University of Phayao, Phayao, 56000, Thailand
| | - Jitrayut Jitonnom
- Unit of Excellence in Computational Molecular Science and Catalysis, and Division of Chemistry, School of Science, University of Phayao, Phayao, 56000, Thailand.
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2
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Nicolás P, Lassalle VL, Ferreira ML. Evaluation of biocatalytic pathways in the synthesis of polyesters: Towards a greener production of surgical sutures. POLYM ADVAN TECHNOL 2022. [DOI: 10.1002/pat.5900] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Paula Nicolás
- Catalysis group PLAPIQUI‐UNS‐CONICET Bahía Blanca Argentina
- Departamento de Química Universidad Nacional del Sur Bahía Blanca Argentina
| | - Verónica L. Lassalle
- Departamento de Química Universidad Nacional del Sur Bahía Blanca Argentina
- Applied Hybrid Nanomaterials group INQUISUR‐UNS‐CONICET Bahía Blanca Argentina
| | - María L. Ferreira
- Catalysis group PLAPIQUI‐UNS‐CONICET Bahía Blanca Argentina
- Departamento de Química Universidad Nacional del Sur Bahía Blanca Argentina
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3
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Liu Y, Song L, Feng N, Jiang W, Jin Y, Li X. Recent advances in the synthesis of biodegradable polyesters by sustainable polymerization: lipase-catalyzed polymerization. RSC Adv 2020; 10:36230-36240. [PMID: 35517080 PMCID: PMC9056969 DOI: 10.1039/d0ra07138b] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2020] [Accepted: 09/21/2020] [Indexed: 12/12/2022] Open
Abstract
Over the past three decades, enzymatic polymerization has dramatically developed and gradually broadened as a creative methodology in the construction of polymeric materials with tailor-made structures and properties. Compared with transition metal catalyst polymerizations, enzymatic polymerization is more attractive in the biomedicine field due to the metal-free residue, good biocompatibility, and few by-products. Meanwhile, enzymatic polymerization has far more activity towards macrolides. In this review, the synthesis of lipase-catalyzed polymer materials is systematically summarized, focusing on the synthesis of the complex and well-defined polymers. The enzymatic polyester synthesis was then discussed concerning the different reaction types, including ring-opening polymerization, polycondensation, a combination of ring-opening polymerization with polycondensation, and chemoenzymatic polymerization. Besides, exploration of novel biocatalysts and reaction media was also described, with particular emphasis on the enzymes obtained via immobilization or protein engineering strategies, green solvents, and reactors. Finally, recent developments in catalytic kinetics and mechanistic studies through the use of spectroscopy, mathematics, and computer techniques have been introduced. Besides, we addressed the remaining central issues in enzymatic polymerization and discussed current studies aimed at providing answers.
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Affiliation(s)
- Ying Liu
- College of Chemistry, Jilin University No. 2699, Qianjin Road Changchun Jilin 130012 PR China
| | - Lijie Song
- First Clinical Hospital, Jilin Province Academy of Traditional Chinese Medicine Changchun 130021 China
| | - Na Feng
- Department of Molecular Pathology, Application Center for Precision Medicine, The Second Affiliated Hospital of Zhengzhou University, Academy of Medical Sciences Zhengzhou Henan 450052 China
| | - Wei Jiang
- Department of Molecular Pathology, Application Center for Precision Medicine, The Second Affiliated Hospital of Zhengzhou University, Academy of Medical Sciences Zhengzhou Henan 450052 China
| | - Yongri Jin
- College of Chemistry, Jilin University No. 2699, Qianjin Road Changchun Jilin 130012 PR China
| | - Xuwen Li
- College of Chemistry, Jilin University No. 2699, Qianjin Road Changchun Jilin 130012 PR China
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4
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Figueiredo PR, Almeida BC, Dourado DFAR, Sousa AF, Silvestre AJD, Carvalho ATP. Enzymatic Synthesis of Poly(caprolactone): A QM/MM Study. ChemCatChem 2020. [DOI: 10.1002/cctc.202000780] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Affiliation(s)
- Pedro R. Figueiredo
- CNC – Center for Neuroscience and Cell Biology Institute for Interdisciplinary Research (IIIUC) University of Coimbra 3004-504 Coimbra Portugal
| | - Beatriz C. Almeida
- CNC – Center for Neuroscience and Cell Biology Institute for Interdisciplinary Research (IIIUC) University of Coimbra 3004-504 Coimbra Portugal
| | - Daniel F. A. R. Dourado
- Almac Sciences Department of Biocatalysis and Isotope Chemistry Almac House 20 Seagoe Industrial Estate Craigavon BT63 5QD Northern Ireland UK
| | | | | | - Alexandra T. P. Carvalho
- CNC – Center for Neuroscience and Cell Biology Institute for Interdisciplinary Research (IIIUC) University of Coimbra 3004-504 Coimbra Portugal
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5
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Figueiredo P, Almeida BC, Carvalho ATP. Enzymatic Polymerization of PCL-PEG Co-polymers for Biomedical Applications. Front Mol Biosci 2019; 6:109. [PMID: 31681797 PMCID: PMC6811512 DOI: 10.3389/fmolb.2019.00109] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2019] [Accepted: 10/04/2019] [Indexed: 11/25/2022] Open
Abstract
Biodegradable polymers, obtained via chemical synthesis, are currently employed in a wide range of biomedical applications. However, enzymatic polymerization is an attractive alternative because it is more sustainable and safer. Many lipases can be employed in ring-opening polymerization (ROP) of biodegradable polymers. Nevertheless, the harsh conditions required in industrial context are not always compatible with their enzymatic activity. In this work, we have studied a thermophilic carboxylesterase and the commonly used Lipase B from Candida antarctica (CaLB) for tailored synthesis of amphiphilic polyesters for biomedical applications. We have conducted Molecular Dynamics (MD) and Quantum Mechanics/Molecular Mechanics (QM/MM) MD simulations of the synthesis of Polycaprolactone-Polyethylene Glycol (PCL-PEG) model co-polymers. Our insights about the reaction mechanisms are important for the design of customized enzymes capable to synthesize different polyesters for biomedical applications.
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Affiliation(s)
| | | | - Alexandra T. P. Carvalho
- Center for Neuroscience and Cell Biology, Institute for Interdisciplinary Research (IIIUC), University of Coimbra, Coimbra, Portugal
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6
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Enzyme responsive copolymer micelles enhance the anti-biofilm efficacy of the antiseptic chlorhexidine. Int J Pharm 2019; 566:329-341. [PMID: 31152793 DOI: 10.1016/j.ijpharm.2019.05.069] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2019] [Revised: 05/09/2019] [Accepted: 05/27/2019] [Indexed: 12/22/2022]
Abstract
Staphylococcal biofilms cause many infectious diseases and are highly tolerant to the effects of antimicrobials; this is partly due to the biofilm matrix, which acts as a physical barrier retarding the penetration and reducing susceptibility to antimicrobials, thereby decreasing successful treatment outcomes. In this study, both single and mixed micellar systems based on poly vinyl caprolactam (PCL)-polyethylene glycol (PEG) copolymers were optimised for delivery of chlorhexidine (CHX) to S. aureus, MRSA and S. epidermidis biofilms and evaluated for their toxicity using Caenorhabditis elegans. The respective polyethylene glycol (PEG) and poly vinyl caprolactam (PCL) structural components promoted stealth properties and enzymatic responsive release of CHX inside biofilms, leading to significantly enhanced penetration (56%) compared with free CHX and improving the efficacy against Staphylococcus aureus biofilms grown on an artificial dermis (2.4 log reduction of CFU). Mixing Soluplus-based micelles with Solutol further enhanced the CHX penetration (71%) and promoted maximum reduction in biofilm biomass (>60%). Nematodes-based toxicity assay showed micelles with no lethal effects as indicated by their high survival rate (100%) after 72 h exposure. This study thus demonstrated that bio-responsive carriers can be designed to deliver a poorly water-soluble antimicrobial agent and advance the control of biofilm associated infections.
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7
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Yu SY, Ren P, Zheng HM, Zhang CG. Copolymerization Mechanisms of Propylene and Norbornadiene Catalyzed by Zirconocene Complexes: A Density Functional Theory Study. B KOREAN CHEM SOC 2018. [DOI: 10.1002/bkcs.11399] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Affiliation(s)
- Shu-Yuan Yu
- Department of Chemistry and Material Science; Langfang Teachers University; Langfang 065000 China
| | - Ping Ren
- Department of Chemistry and Material Science; Langfang Teachers University; Langfang 065000 China
| | - Hui-Min Zheng
- Department of Chemistry and Material Science; Langfang Teachers University; Langfang 065000 China
| | - Cheng-Gen Zhang
- Department of Chemistry and Material Science; Langfang Teachers University; Langfang 065000 China
- College of Chemistry and Chemical Engineering; University of Chinese Academy of Sciences; Beijing 100049 China
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8
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Duchiron SW, Pollet E, Givry S, Avérous L. Enzymatic Synthesis of Amino Acids Endcapped Polycaprolactone: A Green Route Towards Functional Polyesters. Molecules 2018; 23:E290. [PMID: 29385763 PMCID: PMC6017777 DOI: 10.3390/molecules23020290] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2017] [Revised: 01/15/2018] [Accepted: 01/23/2018] [Indexed: 01/27/2023] Open
Abstract
ε-caprolactone (CL) has been enzymatically polymerized using α-amino acids based on sulfur (methionine and cysteine) as (co-)initiators and immobilized lipase B of Candida antarctica (CALB) as biocatalyst. In-depth characterizations allowed determining the corresponding involved mechanisms and the polymers thermal properties. Two synthetic strategies were tested, a first one with direct polymerization of CL with the native amino acids and a second one involving the use of an amino acid with protected functional groups. The first route showed that mainly polycaprolactone (PCL) homopolymer could be obtained and highlighted the lack of reactivity of the unmodified amino acids due to poor solubility and affinity with the lipase active site. The second strategy based on protected cysteine showed higher monomer conversion, with the amino acids acting as (co-)initiators, but their insertion along the PCL chains remained limited to chain endcapping. These results thus showed the possibility to synthesize enzymatically polycaprolactone-based chains bearing amino acids units. Such cysteine endcapped PCL materials could then find application in the biomedical field. Indeed, subsequent functionalization of these polyesters with drugs or bioactive molecules can be obtained, by derivatization of the amino acids, after removal of the protecting group.
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Affiliation(s)
- Stéphane W Duchiron
- BioTeam/ICPEES-ECPM, UMR CNRS 7515, Université de Strasbourg, 25 rue Becquerel, 67087 Strasbourg CEDEX 2, France.
| | - Eric Pollet
- BioTeam/ICPEES-ECPM, UMR CNRS 7515, Université de Strasbourg, 25 rue Becquerel, 67087 Strasbourg CEDEX 2, France.
| | - Sébastien Givry
- J. SOUFFLET S. A., Centre de Recherche et d'Innovation Soufflet-Division Biotechnologies, Quai du Général Sarail, 10402 Nogent sur Seine CEDEX 2, France.
| | - Luc Avérous
- BioTeam/ICPEES-ECPM, UMR CNRS 7515, Université de Strasbourg, 25 rue Becquerel, 67087 Strasbourg CEDEX 2, France.
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9
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Ortuño MA, Dereli B, Chiaie KRD, Biernesser AB, Qi M, Byers JA, Cramer CJ. The Role of Alkoxide Initiator, Spin State, and Oxidation State in Ring-Opening Polymerization of ε-Caprolactone Catalyzed by Iron Bis(imino)pyridine Complexes. Inorg Chem 2018; 57:2064-2071. [PMID: 29381341 DOI: 10.1021/acs.inorgchem.7b02964] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
Density functional theory (DFT) is employed to characterize in detail the mechanism for the ring-opening polymerization (ROP) of ε-caprolactone catalyzed by iron alkoxide complexes bearing redox-active bis(imino)pyridine ligands. The combination of iron with the non-innocent bis(imino)pyridine ligand permits comparison of catalytic activity as a function of oxidation state (and overall spin state). The reactivities of aryl oxide versus alkoxide initiators for the ROP of ε-caprolactone are also examined. An experimental test of a computational prediction reveals an Fe(III) bis(imino)pyridine bis-neopentoxide complex to be competent for ROP of ε-caprolactone.
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Affiliation(s)
- Manuel A Ortuño
- Department of Chemistry, Chemical Theory Center, and Supercomputing Institute, University of Minnesota , 207 Pleasant Street SE, Minneapolis, Minnesota 55455, United States
| | - Büsra Dereli
- Department of Chemistry, Chemical Theory Center, and Supercomputing Institute, University of Minnesota , 207 Pleasant Street SE, Minneapolis, Minnesota 55455, United States
| | - Kayla R Delle Chiaie
- Eugene F. Merkert Chemistry Center, Department of Chemistry, Boston College , 2609 Beacon Street, Chestnut Hill, Massachusetts 02467, United States
| | - Ashley B Biernesser
- Eugene F. Merkert Chemistry Center, Department of Chemistry, Boston College , 2609 Beacon Street, Chestnut Hill, Massachusetts 02467, United States
| | - Miao Qi
- Eugene F. Merkert Chemistry Center, Department of Chemistry, Boston College , 2609 Beacon Street, Chestnut Hill, Massachusetts 02467, United States
| | - Jeffery A Byers
- Eugene F. Merkert Chemistry Center, Department of Chemistry, Boston College , 2609 Beacon Street, Chestnut Hill, Massachusetts 02467, United States
| | - Christopher J Cramer
- Department of Chemistry, Chemical Theory Center, and Supercomputing Institute, University of Minnesota , 207 Pleasant Street SE, Minneapolis, Minnesota 55455, United States
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10
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Zhu W, Liu Y. Ring Contraction Catalyzed by the Metal-Dependent Radical SAM Enzyme: 7-Carboxy-7-deazaguanine Synthase from B. multivorans. Theoretical Insights into the Reaction Mechanism and the Influence of Metal Ions. ACS Catal 2015. [DOI: 10.1021/acscatal.5b00156] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Wenyou Zhu
- Key
Laboratory of Colloid and Interface Chemistry, Ministry of Education,
School of Chemistry and Chemical Engineering, Shandong University, Jinan, Shandong 250100, China
| | - Yongjun Liu
- Key
Laboratory of Colloid and Interface Chemistry, Ministry of Education,
School of Chemistry and Chemical Engineering, Shandong University, Jinan, Shandong 250100, China
- Key
Laboratory of Tibetan Medicine Research, Northwest Institute of Plateau
Biology, Chinese Academy of Sciences, Xining, Qinghai 810001, China
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11
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He Y, Li JJ, Luo YK, Song F, Wang XL, Wang YZ. Coating Novozyme435 with an ionic liquid: more than just a coating for the efficient ring-opening polymerization of δ-valerolactone. RSC Adv 2015. [DOI: 10.1039/c5ra10227h] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022] Open
Abstract
Smart coating of an ionic liquid on Novozyme435: enhancement of catalytic activity and reusability.
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Affiliation(s)
- Ye He
- Center for Degradable and Flame-Retardant Polymeric Materials (ERCPM-MoE)
- College of Chemistry
- State Key Laboratory of Polymer Materials Engineering
- National Engineering Laboratory of Eco-Friendly Polymeric Materials (Sichuan)
- Sichuan University
| | - Jian-Jie Li
- Center for Degradable and Flame-Retardant Polymeric Materials (ERCPM-MoE)
- College of Chemistry
- State Key Laboratory of Polymer Materials Engineering
- National Engineering Laboratory of Eco-Friendly Polymeric Materials (Sichuan)
- Sichuan University
| | - Yan-Kui Luo
- Center for Degradable and Flame-Retardant Polymeric Materials (ERCPM-MoE)
- College of Chemistry
- State Key Laboratory of Polymer Materials Engineering
- National Engineering Laboratory of Eco-Friendly Polymeric Materials (Sichuan)
- Sichuan University
| | - Fei Song
- Center for Degradable and Flame-Retardant Polymeric Materials (ERCPM-MoE)
- College of Chemistry
- State Key Laboratory of Polymer Materials Engineering
- National Engineering Laboratory of Eco-Friendly Polymeric Materials (Sichuan)
- Sichuan University
| | - Xiu-Li Wang
- Center for Degradable and Flame-Retardant Polymeric Materials (ERCPM-MoE)
- College of Chemistry
- State Key Laboratory of Polymer Materials Engineering
- National Engineering Laboratory of Eco-Friendly Polymeric Materials (Sichuan)
- Sichuan University
| | - Yu-Zhong Wang
- Center for Degradable and Flame-Retardant Polymeric Materials (ERCPM-MoE)
- College of Chemistry
- State Key Laboratory of Polymer Materials Engineering
- National Engineering Laboratory of Eco-Friendly Polymeric Materials (Sichuan)
- Sichuan University
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12
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Zhang J, Shi H, Wu D, Xing Z, Zhang A, Yang Y, Li Q. Recent developments in lipase-catalyzed synthesis of polymeric materials. Process Biochem 2014. [DOI: 10.1016/j.procbio.2014.02.006] [Citation(s) in RCA: 70] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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13
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Li Y, Lin Z. Theoretical Studies of Ring-Opening Reactions of Phenylcyclobutabenzenol and Its Reactions with Alkynes Catalyzed by Rhodium Complexes. J Org Chem 2013; 78:11357-65. [DOI: 10.1021/jo4019123] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Yang Li
- Department
of Chemistry, The Hong Kong University of Science and Technology, Clear Water
Bay, Kowloon, Hong Kong, People’s Republic of China
| | - Zhenyang Lin
- Department
of Chemistry, The Hong Kong University of Science and Technology, Clear Water
Bay, Kowloon, Hong Kong, People’s Republic of China
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