1
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Lee IS, Filatov M, Min SK. Formulation of transition dipole gradients for non-adiabatic dynamics with polaritonic states. J Chem Phys 2024; 160:154103. [PMID: 38624116 DOI: 10.1063/5.0202095] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2024] [Accepted: 03/31/2024] [Indexed: 04/17/2024] Open
Abstract
A general formulation of the strong coupling between photons confined in a cavity and molecular electronic states is developed for the state-interaction state-average spin-restricted ensemble-referenced Kohn-Sham method. The light-matter interaction is included in the Jaynes-Cummings model, which requires the derivation and implementation of the analytical derivatives of the transition dipole moments between the molecular electronic states. The developed formalism is tested in the simulations of the nonadiabatic dynamics in the polaritonic states resulting from the strong coupling between the cavity photon mode and the ground and excited states of the penta-2,4-dieniminium cation, also known as PSB3. Comparison with the field-free simulations of the excited-state decay dynamics in PSB3 reveals that the light-matter coupling can considerably alter the decay dynamics by increasing the excited state lifetime and hindering photochemically induced torsion about the C=C double bonds of PSB3. The necessity of obtaining analytical transition dipole gradients for the accurate propagation of the dynamics is underlined.
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Affiliation(s)
- In Seong Lee
- Center for Multidimensional Carbon Materials (CMCM), Institute for Basic Science (IBS), Ulsan 44919, Republic of Korea
| | - Michael Filatov
- Center for Multidimensional Carbon Materials (CMCM), Institute for Basic Science (IBS), Ulsan 44919, Republic of Korea
| | - Seung Kyu Min
- Center for Multidimensional Carbon Materials (CMCM), Institute for Basic Science (IBS), Ulsan 44919, Republic of Korea
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Ulju-gun, Ulsan 44919, Republic of Korea
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2
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Shil S, Bhattacharya D, Misra A, Bytautas L. Antiaromatic Molecules as Magnetic Couplers: A Computational Quest. J Phys Chem A 2024; 128:815-828. [PMID: 38267395 PMCID: PMC10860145 DOI: 10.1021/acs.jpca.3c05784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2023] [Revised: 12/28/2023] [Accepted: 01/03/2024] [Indexed: 01/26/2024]
Abstract
In this study, we investigate a set of organic diradical structures in which two oxo-verdazyl radicals are selected as radical spin centers that are connected (coupled) via six coupler molecules (CM), resulting in various magnetic (ferromagnetic (FM) or antiferromagnetic (AFM)) characteristics, as reflected by their exchange coupling constants (J). We have designed 12 diradicals with 6-antiaromatic couplers coupled with bis-oxo-verdazyl diradicals with meta-meta (m-m) and para-meta (p-m) positional connectivities. The nature of the magnetic coupling (ferromagnetic, nonmagnetic, or antiferromagnetic) and the magnitude of the exchange constant J depend on the type of coupler, the connecting point between each radical center and CM, the degree of aromaticity of the coupler, and the length of the through-bond distance between radical centers. The computed magnetic exchange coupling constants J for these diradicals at the B3LYP/6-311++G(d,p) and MN12SX/6-311++G(d,p) levels of theory are large for many of these structures, indicating strong ferromagnetic coupling (with positive J values). In some cases, magnetic couplings are observed with J > 1000 cm-1 (B3LYP/6-311++G(d,p)) and strong antiferromagnetic coupling (with negative J values) with J < -1000 cm-1 (B3LYP/6-311++G(d,p)). Similarly, in some cases, magnetic couplings are observed with J > 289 cm-1 (MN12SX/6-311++G(d,p)) and strong antiferromagnetic coupling (with negative J values) with J < -568 cm-1 (MN12SX/6-311++G(d,p)). Furthermore, while numerous studies have reported that the degree of aromaticity of molecular couplers often favors strong ferromagnetic coupling, displaying the high-spin character of diradicals in their ground states, the couplers chosen in this study are characterized as antiaromatic or nonaromatic. The current investigation provides evidence that, remarkably, antiaromatic couplers are able to enhance stability by favoring electronic diradical structures with very strong ferromagnetic coupling when the length of the through-bond distance and connectivity pattern between radical centers are selected in such a way that the FM coupling is optimized. The findings in this study offer new strategies in the design of novel organic materials with interesting magnetic properties for practical applications.
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Affiliation(s)
- Suranjan Shil
- Manipal
Centre for Natural Sciences (Centre of Excellence), Manipal Academy of Higher Education, Manipal 576104, India
| | | | - Anirban Misra
- Department
of Chemistry, University of North Bengal, Raja Rammohunpur, Siliguri 734013, India
| | - Laimutis Bytautas
- Department
of Chemistry, Galveston College, 4015 Avenue Q, Galveston, Texas 77550, United States
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3
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Yu H, Sun J, Heine T. Predicting Magnetic Coupling and Spin-Polarization Energy in Triangulene Analogues. J Chem Theory Comput 2023. [PMID: 37263582 DOI: 10.1021/acs.jctc.3c00175] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
Triangulene and its analogue metal-free magnetic systems have garnered increasing attention since their discovery. Predicting the magnetic coupling and spin-polarization energy with quantitative accuracy is beyond the predictive power of today's density functional theory (DFT) due to their intrinsic multireference character. Herein, we create a benchmark dataset of 25 magnetic systems with nonlocal spin densities, including the triangulene monomer, dimer, and their analogues. We calculate the magnetic coupling (J) and spin-polarization energy (ΔEspin) of these systems using complete active space self-consistent field (CASSCF) and coupled-cluster methods as high-quality reference values. This reference data is then used to benchmark 22 DFT functionals commonly used in material science. Our results show that, while some functionals consistently correctly predict the qualitative character of the ground state, achieving quantitative accuracy with small relative errors is currently not feasible. PBE0, M06-2X, and MN15 are predicting the correct electronic ground state for all systems investigated here and also have the lowest mean absolute error for predicting both ΔEspin (0.34, 0.32, and 0.31 eV) and J (11.74, 12.66, and 10.64 meV). They may therefore also serve as starting points for higher-level methods such as the GW or the random phase approximation. As other functionals fail for the prediction of the ground state, they cannot be recommended for metal-free magnetic systems.
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Affiliation(s)
- Hongde Yu
- Faculty of Chemistry and Food Chemistry, TU Dresden, 01069 Dresden, Germany
| | - Jianwei Sun
- Department of Physics and Engineering Physics, Tulane University, New Orleans, Louisiana 70118, United States
| | - Thomas Heine
- Faculty of Chemistry and Food Chemistry, TU Dresden, 01069 Dresden, Germany
- Institute of Resource Ecology, Helmholtz-Zentrum Dresden-Rossendorf, 04316 Leipzig, Germany
- Department of Chemistry, Yonsei University and IBS CNM, Seoul 120-749, Korea
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4
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Symmetry of Identical Particles, Modern Achievements in the Pauli Exclusion Principle, in Superconductivity and in Some Other Phenomena. Symmetry (Basel) 2023. [DOI: 10.3390/sym15030701] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/15/2023] Open
Abstract
In this review, the modern achievements in studies of the Pauli exclusion principle (PEP) and the properties of the identical particle systems when PEP is not fulfilled are discussed. The validity of conception of the spin in the framework of density functional theory (DFT) approaches is analyzed. The modern state of the recently discovered Fe-based superconductors is discussed in detail. These materials belong to the paramagnetic semimetal family and become superconductors upon doping. Recently, in 2020, room-temperature superconductivity was realized. However, from the following discussion in the SC community, it was not evident that the results of room-temperature superconductivity have been repeated by other laboratories. Thus, the question “is room temperature really achieved?” is still open. In the concluding remarks, we present the explanation of why the PEP limitations on the symmetry of identical particles system exist in nature, and following from it, some important consequences.
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5
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Meskaldji S, Belkhiri L, Maurice R, Costuas K, Le Guennic B, Boucekkine A, Ephritikhine M. Electronic Structure and Magneto-Structural Correlations Study of Cu 2UL Trinuclear Schiff Base Complexes: A 3d-5f-3d Case. J Phys Chem A 2023; 127:1475-1490. [PMID: 36749943 DOI: 10.1021/acs.jpca.2c08755] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/09/2023]
Abstract
The magnetic properties of trinuclear Schiff base complexes M2AnLi (MII = Zn, Cu; AnIV = Th, U; Li = Schiff base; i = 1-4, 6, 7, 9), exhibiting the [M(μ-O)2]2U core structure with adjacent M1···U and M2···U and next-adjacent M1···M2 interactions, featuring 3d-5f-3d subsystems, have been investigated theoretically using relativistic ZORA/B3LYP computations combined with the broken symmetry (BS) approach. Bond order and natural population analyses reveal that the covalent contribution to the bonding within the Cu-O-U coordination is important thus favoring superexchange coupling between the transition metal and the uranium magnetic centers. The calculated coupling constants JCuU between the Cu and U atoms, agree with the observed shift from the antiferromagnetic (AF) character of the L1,2,3,4 complexes to the ferromagnetic (ferro) of the L6,7,9 ones. The structural parameters, i.e., the Cu···U distances and the Cu-O-U angles, as well as the electronic factors driving the magnetic couplings are discussed. The analyses are supported by the study of the mixed ZnCuULi and Cu2ThLi systems, where in the first complex the CuII (3d9) ion is replaced by the diamagnetic ZnII (3d10) one, whereas in the second complex the UIV (5f2) paramagnetic center is replaced by the diamagnetic ThIV (5f0) one.
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Affiliation(s)
- Samir Meskaldji
- Laboratoire de Physique Mathématique et Subatomique LPMS, Département de Chimie, Université des Frères Mentouri, 25017 Constantine, Algeria.,Ecole Normale Supérieure de l'Enseignement Technologique ENSET, 21000 Skikda, Algeria
| | - Lotfi Belkhiri
- Laboratoire de Physique Mathématique et Subatomique LPMS, Département de Chimie, Université des Frères Mentouri, 25017 Constantine, Algeria.,Centre de Recherche en Sciences Pharmaceutiques CRSP, Ali Mendjeli, 25000 Constantine, Algeria
| | - Rémi Maurice
- Univ Rennes, ISCR UMR 6226 CNRS, Campus de Beaulieu, 35042 Rennes Cedex, France
| | - Karine Costuas
- Univ Rennes, ISCR UMR 6226 CNRS, Campus de Beaulieu, 35042 Rennes Cedex, France
| | - Boris Le Guennic
- Univ Rennes, ISCR UMR 6226 CNRS, Campus de Beaulieu, 35042 Rennes Cedex, France
| | - Abdou Boucekkine
- Univ Rennes, ISCR UMR 6226 CNRS, Campus de Beaulieu, 35042 Rennes Cedex, France
| | - Michel Ephritikhine
- NIMBE, CEA, CNRS, Université Paris-Saclay, CEA Saclay, 91191 Gif-sur-Yvette, France
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6
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Kotaru S, Kähler S, Alessio M, Krylov AI. Magnetic exchange interactions in binuclear and tetranuclear iron(III) complexes described by spin-flip DFT and Heisenberg effective Hamiltonians. J Comput Chem 2023; 44:367-380. [PMID: 35699152 PMCID: PMC10084445 DOI: 10.1002/jcc.26941] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2021] [Revised: 04/07/2022] [Accepted: 04/22/2022] [Indexed: 12/31/2022]
Abstract
Low-energy spectra of single-molecule magnets (SMMs) are often described by Heisenberg Hamiltonians. Within this formalism, exchange interactions between magnetic centers determine the ground-state multiplicity and energy separation between the ground and excited states. In this contribution, we extract exchange coupling constants (J) for a set of iron (III) binuclear and tetranuclear complexes from all-electron calculations using non-collinear spin-flip time-dependent density functional theory (NC-SF-TDDFT). For 12 binuclear complexes with J-values ranging from -6 to -132 cm-1 , our benchmark calculations using the short-range hybrid ωPBEh functional and 6-31G(d,p) basis set agree well with the experimentally derived values (mean absolute error of 4.7 cm-1 ). For the tetranuclear SMMs, the computed J constants are within 6 cm-1 from the experimentally derived values. We explore the range of applicability of the Heisenberg model by analyzing bonding patterns in these Fe(III) complexes using natural orbitals (NO), their occupations, and the number of effectively unpaired electrons. The results illustrate the efficiency of the spin-flip protocol for computing the exchange couplings and the utility of the NO analysis in assessing the validity of effective spin Hamiltonians.
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Affiliation(s)
- Saikiran Kotaru
- Department of ChemistryUniversity of Southern CaliforniaLos AngelesCalifornia
| | - Sven Kähler
- Department of ChemistryUniversity of Southern CaliforniaLos AngelesCalifornia
| | - Maristella Alessio
- Department of ChemistryUniversity of Southern CaliforniaLos AngelesCalifornia
| | - Anna I. Krylov
- Department of ChemistryUniversity of Southern CaliforniaLos AngelesCalifornia
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7
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Kim TI, Lee IS, Kim H, Min SK. Calculation of exciton couplings based on density functional tight-binding coupled to state-interaction state-averaged ensemble-referenced Kohn-Sham approach. J Chem Phys 2023; 158:044106. [PMID: 36725518 DOI: 10.1063/5.0132361] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023] Open
Abstract
We introduce the combination of the density functional tight binding (DFTB) approach, including onsite correction (OC) and long-range corrected (LC) functional and the state-interaction state-averaged spin-restricted ensemble-referenced Kohn-Sham (SI-SA-REKS or SSR) method with extended active space involving four electrons and four orbitals [LC-OC-DFTB/SSR(4,4)], to investigate exciton couplings in multichromophoric systems, such as organic crystals and molecular aggregates. We employ the LC-OC-DFTB/SSR(4,4) method to calculate the excitonic coupling in anthracene and tetracene. As a result, the LC-OC-DFTB/SSR(4,4) method provides a reliable description of the locally excited (LE) state in a single chromophore and the excitonic couplings between chromophores with reasonable accuracy compared to the experiment and the conventional SSR(4,4) method. In addition, the thermal fluctuation of excitonic couplings from dynamic nuclear motion in an anthracene crystal with LC-OC-DFTB/SSR(4,4) shows a similar fluctuation of excitonic coupling and spectral density with those of first-principle calculations. We conclude that LC-OC-DFTB/SSR(4,4) is capable of providing reasonable features related to LE states, such as Frenkel exciton with efficient computational cost.
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Affiliation(s)
- Tae In Kim
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan, South Korea
| | - In Seong Lee
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan, South Korea
| | - Hwon Kim
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan, South Korea
| | - Seung Kyu Min
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan, South Korea
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8
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Towards the engineering of a photon-only two-stroke rotary molecular motor. Nat Commun 2022; 13:6433. [PMID: 36307476 PMCID: PMC9616945 DOI: 10.1038/s41467-022-33695-x] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2022] [Accepted: 09/27/2022] [Indexed: 12/25/2022] Open
Abstract
The rational engineering of photoresponsive materials, e.g., light-driven molecular motors, is a challenging task. Here, we use structure-related design rules to prepare a prototype molecular rotary motor capable of completing an entire revolution using, exclusively, the sequential absorption of two photons; i.e., a photon-only two-stroke motor. The mechanism of rotation is then characterised using a combination of non-adiabatic dynamics simulations and transient absorption spectroscopy measurements. The results show that the rotor moiety rotates axially relative to the stator and produces, within a few picoseconds at ambient T, an intermediate with the same helicity as the starting structure. We discuss how such properties, that include a 0.25 quantum efficiency, can help overcome the operational limitations of the classical overcrowded alkene designs.
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9
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Lee IS, Min SK. Generalized Formulation of the Density Functional Tight Binding-Based Restricted Ensemble Kohn-Sham Method with Onsite Correction to Long-Range Correction. J Chem Theory Comput 2022; 18:3391-3409. [PMID: 35549266 DOI: 10.1021/acs.jctc.2c00037] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We present a generalized formulation for the combination of the density functional tight binding (DFTB) approach and the state-interaction state-average spin-restricted ensemble-referenced Kohn-Sham (SI-SA-REKS or SSR) method by considering onsite correction (OC) as well as the long-range corrected (LC) functional. The OC contribution provides more accurate energies and analytic gradients for individual microstates, while the multireference character of the SSR provides the correct description for conical intersections. We benchmark the LC-OC-DFTB/SSR method against various DFTB calculation methods for excitation energies and conical intersection structures with π/π* or n/π* characters. Furthermore, we perform excited-state molecular dynamics simulations with a molecular rotary motor with variations of LC-OC-DFTB/SSR approaches. We show that the OC contribution to the LC functional is crucial to obtain the correct geometry of conical intersections.
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Affiliation(s)
- In Seong Lee
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Ulju-gun, Ulsan 44919, South Korea
| | - Seung Kyu Min
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Ulju-gun, Ulsan 44919, South Korea
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10
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Mishra P, Yamamoto Y, Chang PH, Nguyen DB, Peralta JE, Baruah T, Zope RR. Study of Self-Interaction Errors in Density Functional Calculations of Magnetic Exchange Coupling Constants Using Three Self-Interaction Correction Methods. J Phys Chem A 2022; 126:1923-1935. [PMID: 35302373 DOI: 10.1021/acs.jpca.1c10354] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We examine the role of self-interaction error (SIE) removal on the evaluation of magnetic exchange coupling constants. In particular, we analyze the effect of scaling down the self-interaction correction (SIC) for three nonempirical density functional approximations (DFAs) namely, the local spin density approximation, the Perdew-Burke-Ernzerhof generalized gradient approximation, and the recent SCAN family of meta-GGA functionals. To this end, we employ three one-electron SIC methods: Perdew-Zunger SIC [Perdew, J. P.; Zunger, A. Phys. Rev. B, 1981, 23, 5048.], the orbitalwise scaled SIC method [Vydrov, O. A. et al. J. Chem. Phys. 2006, 124, 094108.], and the recent local scaling method [Zope, R. R. et al. J. Chem. Phys. 2019, 151, 214108.]. We compute the magnetic exchange coupling constants using the spin projection and nonprojection approaches for sets of molecules composed of dinuclear and polynuclear H···He models, organic radical molecules, and chlorocuprate and compare these results against accurate theories and experiment. Our results show that for the systems that mainly consist of single-electron regions, PZSIC performs well, but for more complex organic systems and the chlorocuprates, an overcorrecting tendency of PZSIC combined with the DFAs utilized in this work is more pronounced, and in such cases, LSIC with kinetic energy density ratio performs better than PZSIC. Analysis of the results in terms of SIC corrections to the density and to the total energy shows that both density and energy correction are required to obtain an improved prediction of magnetic exchange couplings.
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Affiliation(s)
- Prakash Mishra
- Computational Science Program, University of Texas at El Paso, El Paso, Texas 79968, United States
| | - Yoh Yamamoto
- Department of Physics, University of Texas at El Paso, El Paso, Texas 79968, United States
| | - Po-Hao Chang
- Department of Physics, University of Texas at El Paso, El Paso, Texas 79968, United States
| | - Duyen B Nguyen
- Physics Department and Science of Advanced Materials Program, Central Michigan University, Mt. Pleasant, Michigan 48859, United States
| | - Juan E Peralta
- Physics Department and Science of Advanced Materials Program, Central Michigan University, Mt. Pleasant, Michigan 48859, United States
| | - Tunna Baruah
- Computational Science Program, University of Texas at El Paso, El Paso, Texas 79968, United States.,Department of Physics, University of Texas at El Paso, El Paso, Texas 79968, United States
| | - Rajendra R Zope
- Computational Science Program, University of Texas at El Paso, El Paso, Texas 79968, United States.,Department of Physics, University of Texas at El Paso, El Paso, Texas 79968, United States
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11
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Lee S, Park W, Nakata H, Filatov M, Choi CH. Recent advances in ensemble density functional theory and linear response theory for strong correlation. B KOREAN CHEM SOC 2021. [DOI: 10.1002/bkcs.12429] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Affiliation(s)
- Seunghoon Lee
- Division of Chemistry and Chemical Engineering California Institute of Technology Pasadena California USA
| | - Woojin Park
- Department of Chemistry Kyungpook National University Daegu South Korea
| | - Hiroya Nakata
- Department of Chemistry Kyungpook National University Daegu South Korea
| | - Michael Filatov
- Department of Chemistry Kyungpook National University Daegu South Korea
| | - Cheol Ho Choi
- Department of Chemistry Kyungpook National University Daegu South Korea
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12
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Filatov M, Lee S, Choi CH. Description of Sudden Polarization in the Excited Electronic States with an Ensemble Density Functional Theory Method. J Chem Theory Comput 2021; 17:5123-5139. [PMID: 34319730 DOI: 10.1021/acs.jctc.1c00479] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Sudden polarization (SP) is one of the manifestations of electron transfer in the electronically excited states of molecules. Proposed initially to explain the unusual reactivity of photoexcited olefins, SP often occurs in the excited states of molecules possessing strongly correlated diradical ground state. Theoretical description of SP involves mixing between the singly excited and the doubly excited zwitterionic states, which makes it inaccessible with the use of the popular linear-response time-dependent density functional theory methods. In this work, an extended variant of the state-interaction state-averaged spin-restricted ensemble-referenced Kohn-Sham (SI-SA-REKS, or SSR) method is applied to study SP in a number of organic diradical systems. To this end, the analytical derivative formalism is derived and implemented for the SSR(3,2) method (see the main text for explanation of the acronym), which enables the automatic geometry optimization and obtains the relaxed density matrices as well as the electron binding energies and respective Dyson's orbitals. Application of the new method to SP in the lowest singlet excited state of ethylene agrees with the results obtained previously with the use of multireference methods of wavefunction theory. A number of interesting manifestations of SP are observed, such as the charge transfer in photoexcited tetramethyleneethene (TME) diradical mediated by the vibrational motion and conductivity switching in the excited state of a donor-acceptor dyad placed in an external electric field.
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Affiliation(s)
- Michael Filatov
- Department of Chemistry, Kyungpook National University, Daegu 702-701, South Korea
| | - Seunghoon Lee
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Cheol Ho Choi
- Department of Chemistry, Kyungpook National University, Daegu 702-701, South Korea
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13
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Filatov M, Lee S, Nakata H, Choi CH. Signatures of Conical Intersection Dynamics in the Time-Resolved Photoelectron Spectrum of Furan: Theoretical Modeling with an Ensemble Density Functional Theory Method. Int J Mol Sci 2021; 22:4276. [PMID: 33924097 PMCID: PMC8074317 DOI: 10.3390/ijms22084276] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2021] [Revised: 04/13/2021] [Accepted: 04/15/2021] [Indexed: 12/13/2022] Open
Abstract
The non-adiabatic dynamics of furan excited in the ππ* state (S2 in the Franck-Condon geometry) was studied using non-adiabatic molecular dynamics simulations in connection with an ensemble density functional method. The time-resolved photoelectron spectra were theoretically simulated in a wide range of electron binding energies that covered the valence as well as the core electrons. The dynamics of the decay (rise) of the photoelectron signal were compared with the excited-state population dynamics. It was observed that the photoelectron signal decay parameters at certain electron binding energies displayed a good correlation with the events occurring during the excited-state dynamics. Thus, the time profile of the photoelectron intensity of the K-shell electrons of oxygen (decay constant of 34 ± 3 fs) showed a reasonable correlation with the time of passage through conical intersections with the ground state (47 ± 2 fs). The ground-state recovery constant of the photoelectron signal (121 ± 30 fs) was in good agreement with the theoretically obtained excited-state lifetime (93 ± 9 fs), as well as with the experimentally estimated recovery time constant (ca. 110 fs). Hence, it is proposed to complement the traditional TRPES observations with the trXPS (or trNEXAFS) measurements to obtain more reliable estimates of the most mechanistically important events during the excited-state dynamics.
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Affiliation(s)
- Michael Filatov
- Department of Chemistry, Kyungpook National University, Daegu 702-701, Korea
| | - Seunghoon Lee
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125, USA;
| | - Hiroya Nakata
- R & D Center Kagoshima, Kyocera, 1-4 Kokubu Yamashita-cho, Kirishima-shi, Kagoshima 899-4312, Japan;
| | - Cheol-Ho Choi
- Department of Chemistry, Kyungpook National University, Daegu 702-701, Korea
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14
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Liu F, Filatov M, Martínez TJ. Analytical derivatives of the individual state energies in ensemble density functional theory. II. Implementation on graphical processing units (GPUs). J Chem Phys 2021; 154:104108. [DOI: 10.1063/5.0041389] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023] Open
Affiliation(s)
- Fang Liu
- Department of Chemistry, Emory University, Atlanta, Georgia 30322, USA
| | - Michael Filatov
- Department of Chemistry, Kyungpook National University, Daegu 702-701, South Korea
| | - Todd J. Martínez
- Department of Chemistry and The PULSE Institute, Stanford University, Stanford, California 94305, USA
- SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
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15
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Rask AE, Zimmerman PM. Toward Full Configuration Interaction for Transition-Metal Complexes. J Phys Chem A 2021; 125:1598-1609. [DOI: 10.1021/acs.jpca.0c07624] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Alan E. Rask
- Department of Chemistry, University of Michigan, 930N. University Avenue, Ann Arbor 48109, Michigan, United States
| | - Paul M. Zimmerman
- Department of Chemistry, University of Michigan, 930N. University Avenue, Ann Arbor 48109, Michigan, United States
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16
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Ha JK, Kim K, Min SK. Machine Learning-Assisted Excited State Molecular Dynamics with the State-Interaction State-Averaged Spin-Restricted Ensemble-Referenced Kohn-Sham Approach. J Chem Theory Comput 2021; 17:694-702. [PMID: 33470100 DOI: 10.1021/acs.jctc.0c01261] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
We present a machine learning-assisted excited state molecular dynamics (ML-ESMD) based on the ensemble density functional theory framework. Since we represent a diabatic Hamiltonian in terms of generalized valence bond ansatz within the state-interaction state-averaged spin-restricted ensemble-referenced Kohn-Sham (SI-SA-REKS) method, we can avoid singularities near conical intersections, which are crucial in excited state molecular dynamics simulations. We train the diabatic Hamiltonian elements and their analytical gradients with the SchNet architecture to construct machine learning models, while the phase freedom of off-diagonal elements of the Hamiltonian is cured by introducing the phase-less loss function. Our machine learning models show reasonable accuracy with mean absolute errors of ∼0.1 kcal/mol and ∼0.5 kcal/mol/Å for the diabatic Hamiltonian elements and their gradients, respectively, for penta-2,4-dieniminium cation. Moreover, by exploiting the diabatic representation, our models can predict correct conical intersection structures and their topologies. In addition, our ML-ESMD simulations give almost identical result with a direct dynamics at the same level of theory.
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Affiliation(s)
- Jong-Kwon Ha
- Department of Chemistry, School of Natural Science, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Ulju-gun, Ulsan 44919, South Korea
| | - Kicheol Kim
- Department of Chemistry, School of Natural Science, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Ulju-gun, Ulsan 44919, South Korea
| | - Seung Kyu Min
- Department of Chemistry, School of Natural Science, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Ulju-gun, Ulsan 44919, South Korea
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17
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Electronic structure and magnetic properties of naphthalene- and stilbene-diimide-bridged diuranium(V) complexes: a theoretical study. J Mol Model 2020; 26:282. [DOI: 10.1007/s00894-020-04552-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2020] [Accepted: 09/17/2020] [Indexed: 11/26/2022]
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18
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Filatov M, Lee S, Nakata H, Choi CH. Computation of Molecular Electron Affinities Using an Ensemble Density Functional Theory Method. J Phys Chem A 2020; 124:7795-7804. [PMID: 32900199 DOI: 10.1021/acs.jpca.0c06976] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Abstract
The computation of electron attachment energies (electron affinities) was implemented in connection with an ensemble density functional theory method, the state-interaction state-averaged spin-restricted ensemble-referenced Kohn-Sham (SI-SA-REKS or SSR) method. With the use of the extended Koopmans' theorem, the electron affinities and the respective Dyson orbitals are obtained directly for the neutral molecule, thus avoiding the necessity to compute the ionized system. Together with the EKT-SSR (extended Koopmans' theorem-SSR) method for ionization potentials, which was developed earlier, EKT-SSR for electron affinities completes the implementation of the EKT-SSR formalism, which can now be used for obtaining electron detachment as well as the electron attachment energies of molecules in the ground and excited electronic states. The extended EKT-SSR method was tested in the calculation of several closed-shell molecules. For the molecules in the ground states, the EKT-SSR energies of Dyson's orbitals are virtually identical to the energies of the unoccupied orbitals in the usual single-reference spin-restricted Kohn-Sham calculations. For the molecules in the excited states, EKT-SSR predicts an increase of the most positive electron affinity by approximately the amount of the vertical excitation energy. The electron affinities of a number of diradicals were calculated with EKT-SSR and compared with the available experimental data. With the use of a standard density functional (BH&HLYP), the EKT-SSR electron affinities deviate on average by ca. 0.2 eV from the experimental data. It is expected that the agreement with the experiment can be improved by designing density functionals parametrized for ionization energies.
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Affiliation(s)
- Michael Filatov
- Department of Chemistry, Kyungpook National University, Daegu 702-701, South Korea
| | - Seunghoon Lee
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Hiroya Nakata
- R&D Center Kagoshima, Kyocera, 1-4 Kokubu Yamashita-cho, Kirishima-shi, Kagoshima 899-4312, Japan
| | - Cheol Ho Choi
- Department of Chemistry, Kyungpook National University, Daegu 702-701, South Korea
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Filatov M, Lee S, Choi CH. Computation of Molecular Ionization Energies Using an Ensemble Density Functional Theory Method. J Chem Theory Comput 2020; 16:4489-4504. [PMID: 32421323 DOI: 10.1021/acs.jctc.0c00218] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Abstract
Computation of the ionization energies and of the respective Dyson orbitals based on the use of the extended Koopmans theorem (EKT) is implemented in connection with an ensemble density functional theory (eDFT) method, the state-interaction state-averaged spin-restricted ensemble-referenced Kohn-Sham (SI-SA-REKS or SSR) method. The new methodology enables fast computation of the ionization energies and evaluation of the respective Dyson orbitals, the square norms of which are related with the ionization probabilities, in the ground and excited electronic states of molecules. As the application of EKT recycles the intermediate quantities from the SSR analytical energy gradient, evaluation of the ionization energies and probabilities can be carried out on-the-fly during the nonadiabatic molecular dynamics simulations. This opens up a perspective for fast theoretical simulation of the time-resolved photoelectron spectroscopy observations. In the present work, the new methodology is tested in the computation of the ionization energies and Dyson orbitals of several molecules in the ground and excited electronic states, including strongly correlated species, such as the ozone molecule, dissociating chemical bonds, and conical intersections.
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Affiliation(s)
- Michael Filatov
- Department of Chemistry, Kyungpook National University, Daegu 702-701, South Korea
| | - Seunghoon Lee
- Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Cheol Ho Choi
- Department of Chemistry, Kyungpook National University, Daegu 702-701, South Korea
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20
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Hourahine B, Aradi B, Blum V, Bonafé F, Buccheri A, Camacho C, Cevallos C, Deshaye MY, Dumitrică T, Dominguez A, Ehlert S, Elstner M, van der Heide T, Hermann J, Irle S, Kranz JJ, Köhler C, Kowalczyk T, Kubař T, Lee IS, Lutsker V, Maurer RJ, Min SK, Mitchell I, Negre C, Niehaus TA, Niklasson AMN, Page AJ, Pecchia A, Penazzi G, Persson MP, Řezáč J, Sánchez CG, Sternberg M, Stöhr M, Stuckenberg F, Tkatchenko A, Yu VWZ, Frauenheim T. DFTB+, a software package for efficient approximate density functional theory based atomistic simulations. J Chem Phys 2020; 152:124101. [PMID: 32241125 DOI: 10.1063/1.5143190] [Citation(s) in RCA: 409] [Impact Index Per Article: 102.3] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023] Open
Abstract
DFTB+ is a versatile community developed open source software package offering fast and efficient methods for carrying out atomistic quantum mechanical simulations. By implementing various methods approximating density functional theory (DFT), such as the density functional based tight binding (DFTB) and the extended tight binding method, it enables simulations of large systems and long timescales with reasonable accuracy while being considerably faster for typical simulations than the respective ab initio methods. Based on the DFTB framework, it additionally offers approximated versions of various DFT extensions including hybrid functionals, time dependent formalism for treating excited systems, electron transport using non-equilibrium Green's functions, and many more. DFTB+ can be used as a user-friendly standalone application in addition to being embedded into other software packages as a library or acting as a calculation-server accessed by socket communication. We give an overview of the recently developed capabilities of the DFTB+ code, demonstrating with a few use case examples, discuss the strengths and weaknesses of the various features, and also discuss on-going developments and possible future perspectives.
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Affiliation(s)
- B Hourahine
- SUPA, Department of Physics, The University of Strathclyde, Glasgow G4 0NG, United Kingdom
| | - B Aradi
- Bremen Center for Computational Materials Science, University of Bremen, Bremen, Germany
| | - V Blum
- Department of Mechanical Engineering and Materials Science, Duke University, Durham, North Carolina 27708, USA
| | - F Bonafé
- Max Planck Institute for the Structure and Dynamics of Matter, Hamburg, Germany
| | - A Buccheri
- School of Chemistry, University of Bristol, Cantock's Close, Bristol BS8 1TS, United Kingdom
| | - C Camacho
- School of Chemistry, University of Costa Rica, San José 11501-2060, Costa Rica
| | - C Cevallos
- School of Chemistry, University of Costa Rica, San José 11501-2060, Costa Rica
| | - M Y Deshaye
- Department of Chemistry and Advanced Materials Science and Engineering Center, Western Washington University, Bellingham, Washington 98225, USA
| | - T Dumitrică
- Department of Mechanical Engineering, University of Minnesota, Minneapolis, Minnesota 55455, USA
| | - A Dominguez
- Bremen Center for Computational Materials Science, University of Bremen, Bremen, Germany
| | - S Ehlert
- University of Bonn, Bonn, Germany
| | - M Elstner
- Institute of Physical Chemistry, Karlsruhe Institute of Technology, Karlsruhe, Germany
| | - T van der Heide
- Bremen Center for Computational Materials Science, University of Bremen, Bremen, Germany
| | - J Hermann
- Freie Universität Berlin, Berlin, Germany
| | - S Irle
- Computational Sciences and Engineering Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831, USA
| | - J J Kranz
- Institute of Physical Chemistry, Karlsruhe Institute of Technology, Karlsruhe, Germany
| | - C Köhler
- Bremen Center for Computational Materials Science, University of Bremen, Bremen, Germany
| | - T Kowalczyk
- Department of Chemistry and Advanced Materials Science and Engineering Center, Western Washington University, Bellingham, Washington 98225, USA
| | - T Kubař
- Institute of Physical Chemistry, Karlsruhe Institute of Technology, Karlsruhe, Germany
| | - I S Lee
- Department of Chemistry, Ulsan National Institute of Science and Technology, Ulsan, South Korea
| | - V Lutsker
- Institut I - Theoretische Physik, University of Regensburg, Regensburg, Germany
| | - R J Maurer
- Department of Chemistry, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, United Kingdom
| | - S K Min
- Department of Chemistry, Ulsan National Institute of Science and Technology, Ulsan, South Korea
| | - I Mitchell
- Center for Multidimensional Carbon Materials, Institute for Basic Science (IBS), Ulsan 44919, South Korea
| | - C Negre
- Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
| | - T A Niehaus
- Université de Lyon, Université Claude Bernard Lyon 1, CNRS, Institut Lumière Matière, F-69622 Villeurbanne, France
| | - A M N Niklasson
- Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, USA
| | - A J Page
- School of Environmental and Life Sciences, University of Newcastle, Callaghan, Australia
| | - A Pecchia
- CNR-ISMN, Via Salaria km 29.300, 00015 Monterotondo Stazione, Rome, Italy
| | - G Penazzi
- Bremen Center for Computational Materials Science, University of Bremen, Bremen, Germany
| | - M P Persson
- Dassault Systemes, Cambridge, United Kingdom
| | - J Řezáč
- Institute of Organic Chemistry and Biochemistry AS CR, Prague, Czech Republic
| | - C G Sánchez
- Instituto Interdisciplinario de Ciencias Básicas, Universidad Nacional de Cuyo, CONICET, Facultad de Ciencias Exactas y Naturales, Mendoza, Argentina
| | - M Sternberg
- Argonne National Laboratory, Lemont, Illinois 60439, USA
| | - M Stöhr
- Department of Physics and Materials Science, University of Luxembourg, L-1511 Luxembourg City, Luxembourg
| | - F Stuckenberg
- Bremen Center for Computational Materials Science, University of Bremen, Bremen, Germany
| | - A Tkatchenko
- Department of Physics and Materials Science, University of Luxembourg, L-1511 Luxembourg City, Luxembourg
| | - V W-Z Yu
- Department of Mechanical Engineering and Materials Science, Duke University, Durham, North Carolina 27708, USA
| | - T Frauenheim
- Bremen Center for Computational Materials Science, University of Bremen, Bremen, Germany
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21
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Shaik S, Danovich D, Galbraith JM, Braïda B, Wu W, Hiberty PC. Charge‐Shift Bonding: A New and Unique Form of Bonding. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201910085] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Sason Shaik
- Institute of Chemistry The Hebrew University of Jerusalem 9190401 Jerusalem Israel
| | - David Danovich
- Institute of Chemistry The Hebrew University of Jerusalem 9190401 Jerusalem Israel
| | - John Morrison Galbraith
- Department of Chemistry Biochemistry and Physics, Marist College 3399 North Road Poughkeepsie NY 12601 USA
| | - Benoît Braïda
- Laboratoire de Chimie Theorique Sorbonne Universite, UMR7616 CNRS Paris 75252 France
| | - Wei Wu
- State Key Laboratory of Physical Chemistry of Solid Surfaces Fujian Provincial Key Laboratory of Theoretical and Computational Chemistry, and Department of Chemistry Xiamen University Xiamen Fujian 361005 China
| | - Philippe C. Hiberty
- Laboratoire de Chimie Physique, CNRS UMR8000, Bat. 349 Université de Paris-Sud 91405 Orsay Cédex France
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22
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Shaik S, Danovich D, Galbraith JM, Braïda B, Wu W, Hiberty PC. Charge-Shift Bonding: A New and Unique Form of Bonding. Angew Chem Int Ed Engl 2019; 59:984-1001. [PMID: 31476104 DOI: 10.1002/anie.201910085] [Citation(s) in RCA: 66] [Impact Index Per Article: 13.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2019] [Indexed: 12/14/2022]
Abstract
Charge-shift bonds (CSBs) constitute a new class of bonds different than covalent/polar-covalent and ionic bonds. Bonding in CSBs does not arise from either the covalent or the ionic structures of the bond, but rather from the resonance interaction between the structures. This Essay describes the reasons why the CSB family was overlooked by valence-bond pioneers and then demonstrates that the unique status of CSBs is not theory-dependent. Thus, valence bond (VB), molecular orbital (MO), and energy decomposition analysis (EDA), as well as a variety of electron density theories all show the distinction of CSBs vis-à-vis covalent and ionic bonds. Furthermore, the covalent-ionic resonance energy can be quantified from experiment, and hence has the same essential status as resonance energies of organic molecules, e.g., benzene. The Essay ends by arguing that CSBs are a distinct family of bonding, with a potential to bring about a Renaissance in the mental map of the chemical bond, and to contribute to productive chemical diversity.
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Affiliation(s)
- Sason Shaik
- Institute of Chemistry, The Hebrew University of Jerusalem, 9190401, Jerusalem, Israel
| | - David Danovich
- Institute of Chemistry, The Hebrew University of Jerusalem, 9190401, Jerusalem, Israel
| | - John Morrison Galbraith
- Department of Chemistry, Biochemistry and Physics, Marist College, 3399 North Road, Poughkeepsie, NY, 12601, USA
| | - Benoît Braïda
- Laboratoire de Chimie Theorique, Sorbonne Universite, UMR7616 CNRS, Paris, 75252, France
| | - Wei Wu
- State Key Laboratory of Physical Chemistry of Solid Surfaces, Fujian Provincial Key Laboratory of Theoretical and Computational Chemistry, and Department of Chemistry, Xiamen University, Xiamen, Fujian, 361005, China
| | - Philippe C Hiberty
- Laboratoire de Chimie Physique, CNRS UMR8000, Bat. 349, Université de Paris-Sud, 91405, Orsay Cédex, France
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23
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Lee S, Kim EE, Nakata H, Lee S, Choi CH. Efficient implementations of analytic energy gradient for mixed-reference spin-flip time-dependent density functional theory (MRSF-TDDFT). J Chem Phys 2019; 150:184111. [DOI: 10.1063/1.5086895] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Affiliation(s)
- Seunghoon Lee
- Department of Chemistry, Seoul National University, Seoul 151-747, South Korea
| | - Emma Eunji Kim
- Department of Chemistry, Seoul National University, Seoul 151-747, South Korea
| | - Hiroya Nakata
- R & D Center Kagoshima, Kyocera, 1-4 Kokubu Yamashita-cho, Kirishima-shi, Kagoshima 899-4312, Japan
| | - Sangyoub Lee
- Department of Chemistry, Seoul National University, Seoul 151-747, South Korea
| | - Cheol Ho Choi
- Department of Chemistry, Kyungpook National University, Daegu 702-701, South Korea
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24
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Lee IS, Filatov M, Min SK. Formulation and Implementation of the Spin-Restricted Ensemble-Referenced Kohn–Sham Method in the Context of the Density Functional Tight Binding Approach. J Chem Theory Comput 2019; 15:3021-3032. [DOI: 10.1021/acs.jctc.9b00132] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- In Seong Lee
- Department of Chemistry, School of Natural Science, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Ulsan 44919, Republic of Korea
| | - Michael Filatov
- Department of Chemistry, Kyungpook National University, Daegu 702-701, Republic of Korea
| | - Seung Kyu Min
- Department of Chemistry, School of Natural Science, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Ulsan 44919, Republic of Korea
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25
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Abstract
Over the past 25 years, magnetic actinide complexes have been the object of considerable attention, not only at the experimental level, but also at the theoretical one. Such systems are of great interest, owing to the well-known larger spin–orbit coupling for actinide ions, and could exhibit slow relaxation of the magnetization, arising from a large anisotropy barrier, and magnetic hysteresis of purely molecular origin below a given blocking temperature. Furthermore, more diffuse 5f orbitals than lanthanide 4f ones (more covalency) could lead to stronger magnetic super-exchange. On the other hand, the extraordinary experimental challenges of actinide complexes chemistry, because of their rarity and toxicity, afford computational chemistry a particularly valuable role. However, for such a purpose, the use of a multiconfigurational post-Hartree-Fock approach is required, but such an approach is computationally demanding for polymetallic systems—notably for actinide ones—and usually simplified models are considered instead of the actual systems. Thus, Density Functional Theory (DFT) appears as an alternative tool to compute magnetic exchange coupling and to explore the electronic structure and magnetic properties of actinide-containing molecules, especially when the considered systems are very large. In this paper, relevant achievements regarding DFT investigations of the magnetic properties of actinide complexes are surveyed, with particular emphasis on some representative examples that illustrate the subject, including actinides in Single Molecular Magnets (SMMs) and systems featuring metal-metal super-exchange coupling interactions. Examples are drawn from studies that are either entirely computational or are combined experimental/computational investigations in which the latter play a significant role.
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26
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Tian T, Xu T, Kirk SR, Filatov M, Jenkins S. Next-generation quantum theory of atoms in molecules for the ground and excited state of DHCL. Chem Phys Lett 2019. [DOI: 10.1016/j.cplett.2019.01.016] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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27
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Filatov M, Min SK, Choi CH. Theoretical modelling of the dynamics of primary photoprocess of cyclopropanone. Phys Chem Chem Phys 2019; 21:2489-2498. [DOI: 10.1039/c8cp07104g] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Photodecomposition of cyclopropanone is investigated by static quantum chemical calculations and non-adiabatic molecular dynamics (NAMD) simulations.
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Affiliation(s)
- Michael Filatov
- Department of Chemistry
- Kyungpook National University
- Daegu 702-701
- South Korea
| | - Seung Kyu Min
- Department of Chemistry
- School of Natural Sciences
- Ulsan National Institute of Science and Technology (UNIST)
- Ulsan 44919
- South Korea
| | - Cheol Ho Choi
- Department of Chemistry
- Kyungpook National University
- Daegu 702-701
- South Korea
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28
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David G, Wennmohs F, Neese F, Ferré N. Chemical Tuning of Magnetic Exchange Couplings Using Broken-Symmetry Density Functional Theory. Inorg Chem 2018; 57:12769-12776. [DOI: 10.1021/acs.inorgchem.8b01970] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
| | - Frank Wennmohs
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, Mülheim an der Ruhr, 45470 North Rhine-Westphalia, Germany
| | - Frank Neese
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, Mülheim an der Ruhr, 45470 North Rhine-Westphalia, Germany
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29
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Filatov M, Min SK, Kim KS. Non-adiabatic dynamics of ring opening in cyclohexa-1,3-diene described by an ensemble density-functional theory method. Mol Phys 2018. [DOI: 10.1080/00268976.2018.1519200] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Affiliation(s)
- Michael Filatov
- Department of Chemistry, School of Natural Sciences, Ulsan National Institute of Science and Technology (UNIST), Ulsan, Korea
| | - Seung Kyu Min
- Department of Chemistry, School of Natural Sciences, Ulsan National Institute of Science and Technology (UNIST), Ulsan, Korea
| | - Kwang S. Kim
- Department of Chemistry, School of Natural Sciences, Ulsan National Institute of Science and Technology (UNIST), Ulsan, Korea
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30
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Filatov M, Min SK, Kim KS. Direct Nonadiabatic Dynamics by Mixed Quantum-Classical Formalism Connected with Ensemble Density Functional Theory Method: Application to trans-Penta-2,4-dieniminium Cation. J Chem Theory Comput 2018; 14:4499-4512. [DOI: 10.1021/acs.jctc.8b00217] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Affiliation(s)
- Michael Filatov
- Department of Chemistry, School of Natural Sciences, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Korea
| | - Seung Kyu Min
- Department of Chemistry, School of Natural Sciences, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Korea
| | - Kwang S. Kim
- Department of Chemistry, School of Natural Sciences, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Korea
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31
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Filatov M, Liu F, Martínez TJ. Analytical derivatives of the individual state energies in ensemble density functional theory method. I. General formalism. J Chem Phys 2018; 147:034113. [PMID: 28734302 DOI: 10.1063/1.4994542] [Citation(s) in RCA: 46] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
The state-averaged (SA) spin restricted ensemble referenced Kohn-Sham (REKS) method and its state interaction (SI) extension, SI-SA-REKS, enable one to describe correctly the shape of the ground and excited potential energy surfaces of molecules undergoing bond breaking/bond formation reactions including features such as conical intersections crucial for theoretical modeling of non-adiabatic reactions. Until recently, application of the SA-REKS and SI-SA-REKS methods to modeling the dynamics of such reactions was obstructed due to the lack of the analytical energy derivatives. In this work, the analytical derivatives of the individual SA-REKS and SI-SA-REKS energies are derived. The final analytic gradient expressions are formulated entirely in terms of traces of matrix products and are presented in the form convenient for implementation in the traditional quantum chemical codes employing basis set expansions of the molecular orbitals. The implementation and benchmarking of the derived formalism will be described in a subsequent article of this series.
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Affiliation(s)
- Michael Filatov
- Department of Chemistry, School of Natural Sciences, Ulsan National Institute of Science and Technology (UNIST), Ulsan 689-798, South Korea
| | - Fang Liu
- Department of Chemistry and the PULSE Institute, Stanford University, Stanford, California 94305, USA and SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
| | - Todd J Martínez
- Department of Chemistry and the PULSE Institute, Stanford University, Stanford, California 94305, USA and SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
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32
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Filatov M, Martínez TJ, Kim KS. Description of ground and excited electronic states by ensemble density functional method with extended active space. J Chem Phys 2018; 147:064104. [PMID: 28810777 DOI: 10.1063/1.4996873] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
An extended variant of the spin-restricted ensemble-referenced Kohn-Sham (REKS) method, the REKS(4,4) method, designed to describe the ground electronic states of strongly multireference systems is modified to enable calculation of excited states within the time-independent variational formalism. The new method, the state-interaction state-averaged REKS(4,4), i.e., SI-SA-REKS(4,4), is capable of describing several excited states of a molecule involving double bond cleavage, polyradical character, or multiple chromophoric units. We demonstrate that the new method correctly describes the ground and the lowest singlet excited states of a molecule (ethylene) undergoing double bond cleavage. The applicability of the new method for excitonic states is illustrated with π stacked ethylene and tetracene dimers. We conclude that the new method can describe a wide range of multireference phenomena.
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Affiliation(s)
- Michael Filatov
- Department of Chemistry, School of Natural Sciences, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, South Korea
| | - Todd J Martínez
- Department of Chemistry and The PULSE Institute, Stanford University, Stanford, California 94305, USA and SLAC National Accelerator Laboratory, Menlo Park, California 94025, USA
| | - Kwang S Kim
- Department of Chemistry, School of Natural Sciences, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, South Korea
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33
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Orms N, Krylov AI. Singlet-triplet energy gaps and the degree of diradical character in binuclear copper molecular magnets characterized by spin-flip density functional theory. Phys Chem Chem Phys 2018; 20:13127-13144. [PMID: 29376159 DOI: 10.1039/c7cp07356a] [Citation(s) in RCA: 39] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
Abstract
Molecular magnets, defined here as organic polyradicals, can be used as building blocks in the fabrication of novel and structurally diverse magnetic light-weight materials. We present a theoretical investigation of the lowest spin states of several binuclear copper diradicals. In contrast to previous studies, we consider not only the energetics of the low-lying states (which are related to the exchange-coupling parameter within the Heisenberg-Dirac-van-Vleck model), but also the character of the diradical states themselves. We use natural orbitals, their occupations, and the number of effectively unpaired electrons to quantify bonding patterns in these systems. We compare the performance of spin-flip time-dependent density functional theory (SF-TDDFT) using various functionals and effective core potentials against the wave function based approach, equation-of-motion spin-flip coupled-cluster method with single and double substitutions (EOM-SF-CCSD). We find that SF-TDDFT paired with the PBE50 and B5050LYP functionals performs comparably to EOM-SF-CCSD, with respect to both singlet-triplet gaps and states' characters. Visualization of frontier natural orbitals shows that the unpaired electrons are localized on copper centers, in some cases exhibiting slight through-bond interaction via copper d-orbitals and p-orbitals of neighboring ligand atoms. The analysis reveals considerable interactions between the formally unpaired electrons in the antiferromagnetic diradicaloids, meaning that they are poorly described by the Heisenberg-Dirac-van-Vleck model. Thus, for these systems the experimentally derived exchange-coupling parameters are not directly comparable with the singlet-triplet gaps. This explains systematic discrepancies between the computed singlet-triplet energy gaps and the exchange-coupling parameters extracted from experiment.
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Affiliation(s)
- Natalie Orms
- Department of Chemistry, University of Southern California, Los Angeles, California 90089-0482, USA.
| | - Anna I Krylov
- Department of Chemistry, University of Southern California, Los Angeles, California 90089-0482, USA.
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34
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Costa R, Reta D, Moreira IDPR, Illas F. Post-B3LYP Functionals Do Not Improve the Description of Magnetic Coupling in Cu(II) Dinuclear Complexes. J Phys Chem A 2018; 122:3423-3432. [DOI: 10.1021/acs.jpca.7b12663] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
| | - Daniel Reta
- School of Chemistry, The University of Manchester, Oxford Road, Manchester M13 9PL, United Kingdom
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35
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Kaplan IG. Symmetry properties of the electron density and following from it limits on the KS-DFT applications. Mol Phys 2017. [DOI: 10.1080/00268976.2017.1393573] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- Ilya G. Kaplan
- Instituto De Investigaciones en Materiales, Universidad Nacional Autónomo de México, Ciudad de México, México
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36
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Filatov M, Liu F, Kim KS, Martínez TJ. Self-consistent implementation of ensemble density functional theory method for multiple strongly correlated electron pairs. J Chem Phys 2016; 145:244104. [DOI: 10.1063/1.4972174] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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37
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Gupta P, Diefenbach M, Holthausen MC, Förster M. Copper-Mediated Selective Hydroxylation of a Non-activated C−H Bond in Steroids: A DFT Study of Schönecker's Reaction. Chemistry 2016; 23:1427-1435. [DOI: 10.1002/chem.201604829] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2016] [Indexed: 11/08/2022]
Affiliation(s)
- Puneet Gupta
- Institut für Anorganische und Analytische Chemie; Johann Wolfgang Goethe-Universität Frankfurt; Max-von-Laue-Straße 7 60438 Frankfurt am Main Germany
- Present address: Max-Planck-Institut für Kohlenforschung; Kaiser-Wilhelm-Platz 1 45470 Mülheim an der Ruhr Germany
| | - Martin Diefenbach
- Institut für Anorganische und Analytische Chemie; Johann Wolfgang Goethe-Universität Frankfurt; Max-von-Laue-Straße 7 60438 Frankfurt am Main Germany
| | - Max C. Holthausen
- Institut für Anorganische und Analytische Chemie; Johann Wolfgang Goethe-Universität Frankfurt; Max-von-Laue-Straße 7 60438 Frankfurt am Main Germany
| | - Moritz Förster
- Institut für Anorganische und Analytische Chemie; Johann Wolfgang Goethe-Universität Frankfurt; Max-von-Laue-Straße 7 60438 Frankfurt am Main Germany
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38
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Hu MX, Xu T, Momen R, Huan G, Kirk SR, Jenkins S, Filatov M. A QTAIM and stress tensor investigation of the torsion path of a light-driven fluorene molecular rotary motor. J Comput Chem 2016; 37:2588-96. [PMID: 27671359 DOI: 10.1002/jcc.24487] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2016] [Revised: 08/21/2016] [Accepted: 08/23/2016] [Indexed: 11/10/2022]
Abstract
The utility of the QTAIM/stress tensor analysis method for characterizing the photoisomerization of light driven molecular rotary machines is investigated on the example of the torsion path in fluorene molecular motor. The scalar and vector descriptors of QTAIM/stress tensor reveal additional information on the bonding interactions between the rotating units of the motor, which cannot be obtained from the analysis of the ground and excited state potential energy surfaces. The topological features of the fluorene motor molecular graph display that, upon the photoexcitation a certain increase in the torsional stiffness of the rotating bond can be attributed to the increasing topological stability of the rotor carbon atom attached to the rotation axle. The established variations in the torsional stiffness of the rotating bond may cause transfer of certain fraction of the torsional energy to other internal degrees of freedom, such as the pyramidalization distortion. © 2016 Wiley Periodicals, Inc.
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Affiliation(s)
- Ming Xing Hu
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China.,Key Laboratory of Resource Fine-Processing and Advanced Materials of Hunan Province of MOE, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China
| | - Tianlv Xu
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China.,Key Laboratory of Resource Fine-Processing and Advanced Materials of Hunan Province of MOE, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China
| | - Roya Momen
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China.,Key Laboratory of Resource Fine-Processing and Advanced Materials of Hunan Province of MOE, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China
| | - Guo Huan
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China.,Key Laboratory of Resource Fine-Processing and Advanced Materials of Hunan Province of MOE, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China
| | - Steven R Kirk
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China.,Key Laboratory of Resource Fine-Processing and Advanced Materials of Hunan Province of MOE, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China
| | - Samantha Jenkins
- Key Laboratory of Chemical Biology and Traditional Chinese Medicine Research, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China.,Key Laboratory of Resource Fine-Processing and Advanced Materials of Hunan Province of MOE, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha, Hunan, 410081, China
| | - Michael Filatov
- Center for Superfunctional Materials, Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), 50 UNIST-gil, Ulsan, 44919, Korea
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39
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Yu HS, Li SL, Truhlar DG. Perspective: Kohn-Sham density functional theory descending a staircase. J Chem Phys 2016; 145:130901. [DOI: 10.1063/1.4963168] [Citation(s) in RCA: 204] [Impact Index Per Article: 25.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Affiliation(s)
- Haoyu S. Yu
- Department of Chemistry, Chemical Theory Center, and Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, USA
| | - Shaohong L. Li
- Department of Chemistry, Chemical Theory Center, and Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, USA
| | - Donald G. Truhlar
- Department of Chemistry, Chemical Theory Center, and Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, USA
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40
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Filatov M, Martínez TJ, Kim KS. Using the GVB Ansatz to develop ensemble DFT method for describing multiple strongly correlated electron pairs. Phys Chem Chem Phys 2016; 18:21040-50. [PMID: 26947515 DOI: 10.1039/c6cp00236f] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Ensemble density functional theory (DFT) furnishes a rigorous theoretical framework for describing the non-dynamic electron correlation arising from (near) degeneracy of several electronic configurations. Ensemble DFT naturally leads to fractional occupation numbers (FONs) for several Kohn-Sham (KS) orbitals, which thereby become variational parameters of the methodology. The currently available implementation of ensemble DFT in the form of the spin-restricted ensemble-referenced KS (REKS) method was originally designed for systems with only two fractionally occupied KS orbitals, which was sufficient to accurately describe dissociation of a single chemical bond or the singlet ground state of biradicaloid species. To extend applicability of the method to systems with several dissociating bonds or to polyradical species, more fractionally occupied orbitals must be included in the ensemble description. Here we investigate a possibility of developing the extended REKS methodology with the help of the generalized valence bond (GVB) wavefunction theory. The use of GVB enables one to derive a simple and physically transparent energy expression depending explicitly on the FONs of several KS orbitals. In this way, a version of the REKS method with four electrons in four fractionally occupied orbitals is derived and its accuracy in the calculation of various types of strongly correlated molecules is investigated. We propose a possible scheme to ameliorate the partial size-inconsistency that results from perfect spin-pairing. We conjecture that perfect pairing natural orbital (NO) functionals of reduced density matrix functional theory (RDMFT) should also display partial size-inconsistency.
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Affiliation(s)
- Michael Filatov
- Department of Chemistry, School of Natural Sciences, Ulsan National Institute of Science and Technology (UNIST), Ulsan 689-798, Korea.
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41
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Geometrical structure of meta-xylylene based symmetric polyradicals and their magnetic nature: A density functional study. Chem Phys Lett 2016. [DOI: 10.1016/j.cplett.2016.02.024] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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42
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Teyar B, Belkhiri L, Costuas K, Boucekkine A, Meyer K. Electronic Structure and Magnetic Properties of Dioxo-Bridged Diuranium Complexes with Diamond-Core Structural Motifs: A Relativistic DFT Study. Inorg Chem 2016; 55:2870-81. [PMID: 26930424 DOI: 10.1021/acs.inorgchem.5b02704] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Abstract
Electronic structures and magnetic properties of the binuclear bis(μ-oxo) U(IV)/U(IV) K2[{(((nP,Me)ArO)3tacn)U(IV)}2(μ-O)2] and U(V)/U(V) [{(((nP,Me)ArO)3tacn)U(V)}2(μ-O)2] (tacn = triazacyclononane, nP = neopentyl) complexes, exhibiting [U(μ-O)2U] diamond-core structural motifs, have been investigated computationally using scalar relativistic Density Functional Theory (DFT) combined with the Broken Symmetry (BS) approach for their magnetic properties. Using the B3LYP hybrid functional, the BS ground state of the pentavalent [U(V)(μ-O)2U(V)] 5f(1)-5f(1) complex has been found of lower energy than the high spin (HS) triplet state, thus confirming the antiferromagnetic character in agreement with experimental magnetic susceptibility measurements. The nonmagnetic character observed for the tetravalent K2[U(IV)(μ-O)2U(IV)] 5f(2)-5f(2) species is also predicted by our DFT calculations, which led practically to the same energy for the HS and BS states. As reported for related dioxo diuranium(V) systems, superexchange is likely to be responsible for the antiferromagnetic coupling through the π-network orbital pathway within the (μ-O)2 bridge, the dissymmetrical structure of the U2O2 core playing a determining role. In the case of the U(IV) species, our computations indicate that the K(+) counterions are likely to play a role for the observed magnetic property. Finally, the MO analysis, in conjunction with NPA and QTAIM analyses, clarify the electronic structures of the studied complexes. In particular, the fact that the experimentally attempted chemical oxidation of the U(V) species does not lead straightforwardly to binuclear complexes U(VI) is clarified by the MO analysis.
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Affiliation(s)
- Billel Teyar
- Institut des Sciences Chimiques de Rennes, UMR 6226 CNRS-Université de Rennes 1 , Campus de Beaulieu, F-35042 Cedex Rennes, France.,URCHEMS, Département de Chimie, Université des Frères Mentouri , 25017 Constantine, Algeria.,Université Ziane Achour de Djelfa , 17000 Djelfa, Algeria
| | - Lotfi Belkhiri
- URCHEMS, Département de Chimie, Université des Frères Mentouri , 25017 Constantine, Algeria
| | - Karine Costuas
- Institut des Sciences Chimiques de Rennes, UMR 6226 CNRS-Université de Rennes 1 , Campus de Beaulieu, F-35042 Cedex Rennes, France
| | - Abdou Boucekkine
- Institut des Sciences Chimiques de Rennes, UMR 6226 CNRS-Université de Rennes 1 , Campus de Beaulieu, F-35042 Cedex Rennes, France
| | - Karsten Meyer
- Department of Chemistry & Pharmacy, Friedrich-Alexander University of Erlangen - Nürnberg (FAU) , Egerlandstrasse 1, D-91058 Erlangen, Germany
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43
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Nikiforov A, Gamez JA, Thiel W, Huix-Rotllant M, Filatov M. Assessment of approximate computational methods for conical intersections and branching plane vectors in organic molecules. J Chem Phys 2015; 141:124122. [PMID: 25273427 DOI: 10.1063/1.4896372] [Citation(s) in RCA: 59] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023] Open
Abstract
Quantum-chemical computational methods are benchmarked for their ability to describe conical intersections in a series of organic molecules and models of biological chromophores. Reference results for the geometries, relative energies, and branching planes of conical intersections are obtained using ab initio multireference configuration interaction with single and double excitations (MRCISD). They are compared with the results from more approximate methods, namely, the state-interaction state-averaged restricted ensemble-referenced Kohn-Sham method, spin-flip time-dependent density functional theory, and a semiempirical MRCISD approach using an orthogonalization-corrected model. It is demonstrated that these approximate methods reproduce the ab initio reference data very well, with root-mean-square deviations in the optimized geometries of the order of 0.1 Å or less and with reasonable agreement in the computed relative energies. A detailed analysis of the branching plane vectors shows that all currently applied methods yield similar nuclear displacements for escaping the strong non-adiabatic coupling region near the conical intersections. Our comparisons support the use of the tested quantum-chemical methods for modeling the photochemistry of large organic and biological systems.
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Affiliation(s)
- Alexander Nikiforov
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, D-45470 Mülheim an der Ruhr, Germany
| | - Jose A Gamez
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, D-45470 Mülheim an der Ruhr, Germany
| | - Walter Thiel
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, D-45470 Mülheim an der Ruhr, Germany
| | - Miquel Huix-Rotllant
- Institute of Physical and Theoretical Chemistry, Goethe University Frankfurt, Max-von-Laue-Str. 7, D-60438 Frankfurt am Main, Germany
| | - Michael Filatov
- Mulliken Center for Theoretical Chemistry, Institut für Physikalische und Theoretische Chemie, Universität Bonn, Beringstr. 4, D-53115 Bonn, Germany
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44
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Filatov M, Huix-Rotllant M, Burghardt I. Ensemble density functional theory method correctly describes bond dissociation, excited state electron transfer, and double excitations. J Chem Phys 2015; 142:184104. [DOI: 10.1063/1.4919773] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Affiliation(s)
- Michael Filatov
- Department of Chemistry, Southern Methodist University, 3215 Daniel Avenue, Dallas, Texas 75275-0314, USA
| | - Miquel Huix-Rotllant
- Institute of Physical and Theoretical Chemistry, Goethe University Frankfurt, Max-von-Laue-Str. 7, D-60438 Frankfurt am Main, Germany
| | - Irene Burghardt
- Institute of Physical and Theoretical Chemistry, Goethe University Frankfurt, Max-von-Laue-Str. 7, D-60438 Frankfurt am Main, Germany
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45
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Levchenkov SI, Shcherbakov IN, Popov LD, Uraev AI, Suponitskii KY, Zubenko AA, Ionov AM, Kogan VA. Effect of the nature of non-bridging donor atoms on the structure and magnetic properties of binuclear copper(II) complexes with heterocyclic azomethyne ligands. J STRUCT CHEM+ 2015. [DOI: 10.1134/s0022476615010163] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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46
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Pal AK, Hansda S, Datta SN. Quantum chemical investigation of meta-xylylene based one-dimensional polymer chain. J Phys Chem A 2015; 119:2176-85. [PMID: 25695126 DOI: 10.1021/acs.jpca.5b01081] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
We have investigated unsubstituted and methyl substituted polyradical chains of meta-xylylene by using density functional theory-broken symmetry methodology (DFT-BS). Optimization of geometry in the high-spin and low-spin states have been done at B3LYP/6-31G(d,p) and M06-2X/6-31G(d,p) levels in unrestricted methodology. Single-point calculations on the high-spin optimized geometries have been done by using the 6-311G(d,p) basis set. Each polyradical has been found to be nonplanar with a high-spin ground state. Each has a coupling constant larger than thermal energy. For each group of polyradicals, the coupling constant has been found to exponentially decrease with increase in the number of phenylene groups. The B3LYP infinite chain limit has been estimated for both the unsubstituted and substituted polyradicals. The individual inter-radical-site coupling constants have been estimated for the triradicals and tetraradicals using HDVV Hamiltonian in ORCA 3.0.1 code. These are also generally large and positive, revealing a strong intersite ferromagnetic interaction. The intersite coupling constant too decreases with increasing distance between the radical centers. Finally, we have used CRYSTAL09 package for calculations on the infinitely long one-dimensional and periodic polyradical chains. The coupling constants estimated from the periodic calculations are quite large at about 500 cm(-1) and somewhat greater than the limiting values calculated for the polyradicals with an increasing number of phenylene groups. This happens as the individual polyradicals of increasing size progressively deviate from periodicity, and thereby lessens the strength of through-bond spin-spin coupling. The calculated band gap of ∼4.5 eV indicates that the infinitely long one-dimensional chains must be ferromagnetic and electron insulators.
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Affiliation(s)
- Arun K Pal
- Department of Chemistry, Indian Institute of Technology Bombay , Powai, Mumbai 400076, India
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47
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Huix-Rotllant M, Nikiforov A, Thiel W, Filatov M. Description of Conical Intersections with Density Functional Methods. Top Curr Chem (Cham) 2015; 368:445-76. [PMID: 25896441 DOI: 10.1007/128_2015_631] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Conical intersections are perhaps the most significant mechanistic features of chemical reactions occurring through excited states. By providing funnels for efficient non-adiabatic population transfer, conical intersections govern the branching ratio of products of such reactions, similar to what the transition states do for ground-state reactivity. In this regard, intersections between the ground and the lowest excited states play a special role, and the correct description of the potential energy surfaces in their vicinity is crucial for understanding the mechanism and dynamics of excited-state reactions. The methods of density functional theory, such as time-dependent density functional theory, are widely used to describe the excited states of large molecules. However, are these methods suitable for describing the conical intersections or do they lead to artifacts and, consequently, to erroneous description of reaction dynamics? Here we address the first part of this question and analyze the ability of several density functional approaches, including the linear-response time-dependent approach as well as the spin-flip and ensemble formalisms, to provide the correct description of conical intersections and the potential energy surfaces in their vicinity. It is demonstrated that the commonly used linear-response time-dependent theory does not yield a proper description of these features and that one should instead use alternative computational approaches.
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Affiliation(s)
- Miquel Huix-Rotllant
- Institute of Physical and Theoretical Chemistry, Goethe University Frankfurt, Max-von-Laue-Str. 7, 60438, Frankfurt am Main, Germany
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48
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Filatov M. Ensemble DFT Approach to Excited States of Strongly Correlated Molecular Systems. Top Curr Chem (Cham) 2015; 368:97-124. [PMID: 25906417 DOI: 10.1007/128_2015_630] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Ensemble density functional theory (DFT) is a novel time-independent formalism for obtaining excitation energies of many-body fermionic systems. A considerable advantage of ensemble DFT over the more common Kohn-Sham (KS) DFT and time-dependent DFT formalisms is that it enables one to account for strong non-dynamic electron correlation in the ground and excited states of molecular systems in a transparent and accurate fashion. Despite its positive aspects, ensemble DFT has not so far found its way into the repertoire of methods of modern computational chemistry, probably because of the perceived lack of practically affordable implementations of the theory. The spin-restricted ensemble-referenced KS (REKS) method is perhaps the first computationally feasible implementation of the ideas behind ensemble DFT which enables one to describe accurately electronic transitions in a wide class of molecular systems, including strongly correlated molecules (biradicals, molecules undergoing bond breaking/formation), extended π-conjugated systems, donor-acceptor charge transfer adducts, etc.
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Affiliation(s)
- Michael Filatov
- Institut für Physikalische und Theoretische Chemie, Universität Bonn, Beringstr. 4, 53115, Bonn, Germany,
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49
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Filatov M. Spin-restricted ensemble-referenced Kohn-Sham method: basic principles and application to strongly correlated ground and excited states of molecules. WILEY INTERDISCIPLINARY REVIEWS-COMPUTATIONAL MOLECULAR SCIENCE 2014. [DOI: 10.1002/wcms.1209] [Citation(s) in RCA: 92] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Michael Filatov
- Institut für Physikalische und Theoretische Chemie; Universität Bonn; Bonn Germany
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50
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Filatov M. Description of electron transfer in the ground and excited states of organic donor–acceptor systems by single-reference and multi-reference density functional methods. J Chem Phys 2014; 141:124123. [DOI: 10.1063/1.4896455] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Michael Filatov
- Mulliken Center for Theoretical Chemistry, Institut für Physikalische und Theoretische Chemie, Universität Bonn, Beringstr. 4, D-53115 Bonn, Germany
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