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Xue C, Xu X, Lyu H, Li Y, Ren Y, Wang J, Mu Y, Mellouki A, Yang Z. Kinetic and reactivity of gas-phase reaction of acyclic dienes with hydroxyl radical in the 273-318 K temperature range. RSC Adv 2024; 14:12303-12312. [PMID: 38633496 PMCID: PMC11019904 DOI: 10.1039/d3ra08750f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2023] [Accepted: 03/23/2024] [Indexed: 04/19/2024] Open
Abstract
As dienes contain two C[double bond, length as m-dash]C bonds, theoretically, they are much more chemically reactive with hydroxyl radical (˙OH) than alkenes and alkanes, and the reaction with ˙OH is one of the main atmospheric degradation routes of dienes during the daytime. In our work, rate coefficients of three types of acyclic dienes: conjugated as 3-methyl-1,3-pentadiene (3M13PD), isolated as 1,4-hexadiene (14HD), and cumulated as 1,2-pentadiene (12PD) reaction with ˙OH were measured in the temperature range of 273-318 K and 1 atm using the relative rate method. At 298 ± 3 K, the rate coefficients for those reactions were determined to be k3M13PD+OH = (15.09 ± 0.72) × 10-11, k14HD+OH = (9.13 ± 0.62) × 10-11, k12PD+OH = (3.34 ± 0.40) × 10-11 (as units of cm3 per molecule per s), in the excellent agreement with values of previously reported. The first measured temperature dependence for 3M13PD, 14HD and 12PD reaction with ˙OH can be expressed by the following Arrhenius expressions in units of cm3 per molecule per s: k3M13PD+OH = (8.10 ± 2.23) × 10-11 exp[(173 ± 71)/T]; k14HD+OH = (9.82 ± 5.10) × 10-12 exp[(666 ± 123)/T]; k12PD+OH = (1.13 ± 0.87) × 10-12 exp[(1038 ± 167)/T] (as units of cm3 per molecule per s). The kinetic discussion revealed that the relative position between these two C[double bond, length as m-dash]C could significantly affect the reactivity of acyclic dienes toward ˙OH. A simple structure-activity relationship (SAR) method was proposed to estimate the reaction rate coefficients of acyclic dienes with ˙OH.
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Affiliation(s)
- Chenyang Xue
- College of Marine and Environmental Sciences, Tianjin University of Science & Technology Tianjin 300457 China
- Laboratory of Atmospheric Environment and Pollution Control (LAEPC), Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences Beijing 100085 China
| | - Xinmiao Xu
- Laboratory of Atmospheric Environment and Pollution Control (LAEPC), Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences Beijing 100085 China
- College of Resources and Environment, University of Chinese Academy of Sciences Beijing 100049 China
| | - Han Lyu
- School of Municipal and Environmental Engineering, Shandong Jianzhu University Jinan 250101 China
| | - Yunfeng Li
- School of Mechanical Engineering, Beijing Institute of Petrochemical Technology Beijing 102617 China
| | - Yangang Ren
- Laboratory of Atmospheric Environment and Pollution Control (LAEPC), Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences Beijing 100085 China
- College of Resources and Environment, University of Chinese Academy of Sciences Beijing 100049 China
| | - Jinhe Wang
- School of Municipal and Environmental Engineering, Shandong Jianzhu University Jinan 250101 China
| | - Yujing Mu
- Laboratory of Atmospheric Environment and Pollution Control (LAEPC), Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences Beijing 100085 China
- College of Resources and Environment, University of Chinese Academy of Sciences Beijing 100049 China
| | - Abdelwahid Mellouki
- Mohammed VI Polytechnic University Lot 660, Hay Moulay Rachid, Ben Guerir 43150 Morocco
- Institut de Combustion Aérothermique Réactivité et Environnement/OSUC-CNRS 45071 Orléans Cedex 2 France
| | - Zongzheng Yang
- College of Marine and Environmental Sciences, Tianjin University of Science & Technology Tianjin 300457 China
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Mekic M, Schaefer T, Hoffmann EH, Aiyuk MBE, Tilgner A, Herrmann H. Temperature-Dependent Oxidation of Hydroxylated Aldehydes by •OH, SO 4•-, and NO 3• Radicals in the Atmospheric Aqueous Phase. J Phys Chem A 2023; 127:6495-6508. [PMID: 37498295 DOI: 10.1021/acs.jpca.3c00700] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/28/2023]
Abstract
T-dependent aqueous-phase rate constants were determined for the oxidation of the hydroxy aldehydes, glyceraldehyde, glycolaldehyde, and lactaldehyde, by the hydroxyl radicals (•OH), the sulfate radicals (SO4•-), and the nitrate radicals (NO3•). The obtained Arrhenius expressions for the oxidation by the •OH radical are: k(T,GLYCERALDEHYDE+OH•) = (3.3 ± 0.1) × 1010 × exp((-960 ± 80 K)/T)/L mol-1 s-1, k(T,GLYCOLALDEHYDE+OH•) = (4.3 ± 0.1) × 1011 × exp((-1740 ± 50 K)/T)/L mol-1 s-1, k(T,LACTALDEHYDE+OH•) = (1.6 ± 0.1) × 1011 × exp((-1410 ± 180 K)/T)/L mol-1 s-1; for the SO4•- radical: k(T,GLYCERALDEHYDE+SO4•-) = (4.3 ± 0.1) × 109 × exp((-1400 ± 50 K)/T)/L mol-1 s-1, k(T,GLYCOLALDEHYDE+SO4•-) = (10.3 ± 0.3) × 109 × exp((-1730 ± 190 K)/T)/L mol-1 s-1, k(T,LACTALDEHYDE+SO4•-) = (2.2 ± 0.1) × 109 × exp((-1030 ± 230 K)/T)/L mol-1 s-1; and for the NO3• radical: k(T,GLYCERALDEHYDE+NO3•) = (3.4 ± 0.2) × 1011 × exp((-3470 ± 460 K)/T)/L mol-1 s-1, k(T,GLYCOLALDEHYDE+NO3•) = (7.8 ± 0.2) × 1011 × exp((-3820 ± 240 K)/T)/L mol-1 s-1, k(T,LACTALDEHYDE+NO3•) = (4.3 ± 0.2) × 1010 × exp((-2750 ± 340 K)/T)/L mol-1 s-1, respectively. Targeted simulations of multiphase chemistry reveal that the oxidation by OH radicals in cloud droplets is important under remote and wildfire influenced continental conditions due to enhanced partitioning. There, the modeled average aqueous •OH concentration is 2.6 × 10-14 and 1.8 × 10-14 mol L-1, whereas it is 7.9 × 10-14 and 3.5 × 10-14 mol L-1 under wet particle conditions. During cloud periods, the aqueous-phase reactions by •OH contribute to the oxidation of glycolaldehyde, lactaldehyde, and glyceraldehyde by about 35 and 29%, 3 and 3%, and 47 and 37%, respectively.
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Affiliation(s)
- Majda Mekic
- Leibniz Institute for Tropospheric Research (TROPOS), Atmospheric Chemistry Department (ACD), Permoserstraße 15, 04318 Leipzig, Germany
| | - Thomas Schaefer
- Leibniz Institute for Tropospheric Research (TROPOS), Atmospheric Chemistry Department (ACD), Permoserstraße 15, 04318 Leipzig, Germany
| | - Erik H Hoffmann
- Leibniz Institute for Tropospheric Research (TROPOS), Atmospheric Chemistry Department (ACD), Permoserstraße 15, 04318 Leipzig, Germany
| | - Marvel B E Aiyuk
- Leibniz Institute for Tropospheric Research (TROPOS), Atmospheric Chemistry Department (ACD), Permoserstraße 15, 04318 Leipzig, Germany
| | - Andreas Tilgner
- Leibniz Institute for Tropospheric Research (TROPOS), Atmospheric Chemistry Department (ACD), Permoserstraße 15, 04318 Leipzig, Germany
| | - Hartmut Herrmann
- Leibniz Institute for Tropospheric Research (TROPOS), Atmospheric Chemistry Department (ACD), Permoserstraße 15, 04318 Leipzig, Germany
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Yang Y, Jin H, Li X, Yan J. Biohydrogenation of 1,3-Butadiene to 1-Butene under Acetogenic Conditions by Acetobacterium wieringae. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2023; 57:1637-1645. [PMID: 36647731 DOI: 10.1021/acs.est.2c05683] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
Abstract
The environmental fate and transformation mechanism(s) of 1,3-butadiene (BD) under anoxic conditions remain largely unexplored. Anaerobic consortia that can biohydrogenate BD to stoichiometric amounts of 1-butene at a maximum rate of 205.7 ± 38.6 μM day-1 were derived from freshwater river sediment. The formation of 1-butene occurred only in the presence of both H2 and CO2 with concomitant acetate production, suggesting the dependence of BD biohydrogenation on acetogenesis. The 16S rRNA gene-targeted amplicon sequencing revealed the enrichment and dominance of a novel Acetobacterium wieringae population, designated as strain N, in the BD-biohydrogenating community. Multiple genes encoding putative ene-reductases, candidate catalysts for the hydrogenation of the C═C bond in diene compounds, were annotated on the metagenome-assembled genome of strain N, and thus attributed the BD biohydrogenation activity to strain N. Our findings emphasize an essential but overlooked role of certain Acetobacterium members (e.g., strain N) contributing to the natural attenuation of BD in contaminated subsurface environments (e.g., sediment and groundwater). Future efforts to identify and characterize the ene-reductase(s) responsible for BD biohydrogenation in strain N hold promise for the development of industrial biocatalysts capable of stereoselective conversion of BD to 1-butene.
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Affiliation(s)
- Yi Yang
- Key Laboratory of Pollution Ecology and Environmental Engineering, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang, Liaoning 110016, China
| | - Huijuan Jin
- Key Laboratory of Pollution Ecology and Environmental Engineering, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang, Liaoning 110016, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Xiuying Li
- Key Laboratory of Pollution Ecology and Environmental Engineering, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang, Liaoning 110016, China
| | - Jun Yan
- Key Laboratory of Pollution Ecology and Environmental Engineering, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang, Liaoning 110016, China
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Jaoui M, Piletic IR, Szmigielski R, Rudzinski KJ, Lewandowski M, Riedel TP, Kleindienst TE. Rapid production of highly oxidized molecules in isoprene aerosol via peroxy and alkoxy radical isomerization pathways in low and high NO x environments: Combined laboratory, computational and field studies. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 775:145592. [PMID: 34380608 PMCID: PMC8363757 DOI: 10.1016/j.scitotenv.2021.145592] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/23/2020] [Revised: 01/11/2021] [Accepted: 01/28/2021] [Indexed: 06/12/2023]
Abstract
Recently, we identified seven novel hydroxy-carboxylic acids resulting from gas-phase reactions of isoprene in the presence of nitrogen oxides (NOx), ozone (O3), and/or hydroxyl radicals (OH). In the present study, we provide evidence that hydroxy-carboxylic acids, namely methyltartaric acids (MTA) are: (1) reliable isoprene tracers, (2) likely produced via rapid peroxy radical hydrogen atom (H) shift reactions (autoxidation mechanism) and analogous alkoxy radical H shifts in low and high NOx environments respectively and (3) representative of aged ambient aerosol in the low NOx regime. Firstly, MTA are reliable tracers of isoprene aerosol because they have been identified in numerous chamber experiments involving isoprene conducted under a wide range of conditions and are absent in the oxidation of mono- and sesquiterpenes. They are also present in numerous samples of ambient aerosol collected during the past 20 years at several locations in the U.S. and Europe. Furthermore, MTA concentrations measured during a year-long field study in Research Triangle Park (RTP), NC in 2003 show a seasonal trend consistent with isoprene emissions and photochemical activity. Secondly, an analysis of chemical ionization mass spectrometer (CIMS) data of several chamber experiments in low and high NOx environments show that highly oxidized molecules (HOMs) derived from isoprene that lead to MTAs may be produced rapidly and considered as early generation isoprene oxidation products in the gas phase. Density functional theory calculations show that rapid intramolecular H shifts involving peroxy and alkoxy radicals possess low barriers for methyl-hydroxy-butenals (MHBs) that may represent precursors for MTA. From these results, a viable rapid H shift mechanism is proposed to occur that produces isoprene derived HOMs like MTA. Finally, an analysis of the mechanism shows that autoxidation-like pathways in low and high NOx may produce HOMs in a few OH oxidation steps like commonly detected methyl tetrol (MT) isoprene tracers. The ratio of MTA/MT in isoprene aerosol is also shown to be significantly greater in field versus chamber samples indicating the importance of such pathways in the atmosphere even for smaller hydrocarbons like isoprene.
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Affiliation(s)
- Mohammed Jaoui
- Center for Environmental Measurement & Modeling, U.S. Environmental Protection Agency, Research Triangle Park, NC 27711, United States of America.
| | - Ivan R Piletic
- Center for Environmental Measurement & Modeling, U.S. Environmental Protection Agency, Research Triangle Park, NC 27711, United States of America
| | - Rafal Szmigielski
- Environmental Chemistry Group, Institute of Physical Chemistry, Polish Academy of Sciences, 01-224 Warsaw, Poland
| | - Krzysztof J Rudzinski
- Environmental Chemistry Group, Institute of Physical Chemistry, Polish Academy of Sciences, 01-224 Warsaw, Poland
| | - Michael Lewandowski
- Center for Environmental Measurement & Modeling, U.S. Environmental Protection Agency, Research Triangle Park, NC 27711, United States of America
| | - Theran P Riedel
- Center for Environmental Measurement & Modeling, U.S. Environmental Protection Agency, Research Triangle Park, NC 27711, United States of America
| | - Tadeusz E Kleindienst
- Center for Environmental Measurement & Modeling, U.S. Environmental Protection Agency, Research Triangle Park, NC 27711, United States of America
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Wang Q, Li Q, Wei D, Su G, Wu M, Li C, Sun B, Dai L. Photochemical reactions of 1,3-butadiene with nitrogen oxide in different matrices: Kinetic behavior, humidity effect, product and mechanisms. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 721:137747. [PMID: 32179348 DOI: 10.1016/j.scitotenv.2020.137747] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/07/2019] [Revised: 02/17/2020] [Accepted: 03/03/2020] [Indexed: 06/10/2023]
Abstract
Understanding the photochemical reaction process between VOCs and co-pollutants in the troposphere is crucial for controlling the haze. The photochemical reactions of 1,3-butadiene (1,3-BD) with NO were carried out at 308 K for up to 96 h in clean air with various relative humidity (RH) values, and actual haze atmosphere. In the haze, the representative pseudo-first-order kinetic rate constants of the 1,3-BD-NO system was 1.53 time higher than those in dry clean air. The effect of the RH (0%-80%) on the conversion behavior of the 1,3-BD-NO system in clean air was studied, revealing that increasing RH promoted the photochemical reaction in the low range of 0%-40% but retarded it in the high range of 40%-80%. Interestingly, OH radicals were directly detected under different RH values, and the strongest OH signal was obtained at an RH of 40%. Multiple macromolecular products with carbon numbers of 10-36 were identified. Unexpectedly, richer products and extended unsaturation range were detected at an RH of 40% than 0%. The photochemical products were also analyzed using ion chromatography. A reaction mechanism was proposed from the detected NO2, O3, OH, HNO2, HNO3, organic acids and macromolecular products.
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Affiliation(s)
- Qingliang Wang
- Key Laboratory of Environmental Nanotechnology and Health Effects, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, P.O. Box 2871, Beijing 100085, China; College of Materials and Chemistry & Chemical Engineering, Chengdu University of Technology, Chengdu 610059, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Qianqian Li
- Key Laboratory of Environmental Nanotechnology and Health Effects, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, P.O. Box 2871, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Da Wei
- Key Laboratory of Environmental Nanotechnology and Health Effects, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, P.O. Box 2871, Beijing 100085, China; College of Materials and Chemistry & Chemical Engineering, Chengdu University of Technology, Chengdu 610059, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Guijin Su
- Key Laboratory of Environmental Nanotechnology and Health Effects, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, P.O. Box 2871, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China.
| | - Mingge Wu
- Key Laboratory of Environmental Nanotechnology and Health Effects, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, P.O. Box 2871, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Chuanqi Li
- Key Laboratory of Environmental Nanotechnology and Health Effects, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, P.O. Box 2871, Beijing 100085, China; College of Materials and Chemistry & Chemical Engineering, Chengdu University of Technology, Chengdu 610059, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Bohua Sun
- Key Laboratory of Environmental Nanotechnology and Health Effects, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, P.O. Box 2871, Beijing 100085, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Lingwen Dai
- Key Laboratory of Environmental Nanotechnology and Health Effects, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, P.O. Box 2871, Beijing 100085, China; College of Materials and Chemistry & Chemical Engineering, Chengdu University of Technology, Chengdu 610059, China; University of Chinese Academy of Sciences, Beijing 100049, China
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Otto T, Schaefer T, Herrmann H. Aqueous-Phase Oxidation of cis-β-Isoprene Epoxydiol by Hydroxyl Radicals and Its Impact on Atmospheric Isoprene Processing. J Phys Chem A 2019; 123:10599-10608. [DOI: 10.1021/acs.jpca.9b08836] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Tobias Otto
- Atmospheric Chemistry Department (ACD), Leibniz Institute for Tropospheric Research (TROPOS), Permoserstraße 15, 04318 Leipzig, Saxony, Germany
| | - Thomas Schaefer
- Atmospheric Chemistry Department (ACD), Leibniz Institute for Tropospheric Research (TROPOS), Permoserstraße 15, 04318 Leipzig, Saxony, Germany
| | - Hartmut Herrmann
- Atmospheric Chemistry Department (ACD), Leibniz Institute for Tropospheric Research (TROPOS), Permoserstraße 15, 04318 Leipzig, Saxony, Germany
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7
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Otto T, Stieger B, Mettke P, Herrmann H. Tropospheric Aqueous-Phase Oxidation of Isoprene-Derived Dihydroxycarbonyl Compounds. J Phys Chem A 2017; 121:6460-6470. [PMID: 28753026 DOI: 10.1021/acs.jpca.7b05879] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Tobias Otto
- Leibniz Institute for Tropospheric Research (TROPOS), Atmospheric Chemistry Department (ACD), Permoserstrasse 15, 04318 Leipzig, Germany
| | - Bastian Stieger
- Leibniz Institute for Tropospheric Research (TROPOS), Atmospheric Chemistry Department (ACD), Permoserstrasse 15, 04318 Leipzig, Germany
| | - Peter Mettke
- Leibniz Institute for Tropospheric Research (TROPOS), Atmospheric Chemistry Department (ACD), Permoserstrasse 15, 04318 Leipzig, Germany
| | - Hartmut Herrmann
- Leibniz Institute for Tropospheric Research (TROPOS), Atmospheric Chemistry Department (ACD), Permoserstrasse 15, 04318 Leipzig, Germany
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8
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Aizenbud D, Aizenbud I, Reznick AZ, Avezov K. Acrolein-an α,β-Unsaturated Aldehyde: A Review of Oral Cavity Exposure and Oral Pathology Effects. Rambam Maimonides Med J 2016; 7:RMMJ.10251. [PMID: 27487309 PMCID: PMC5001796 DOI: 10.5041/rmmj.10251] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 02/05/2023] Open
Abstract
Acrolein is a highly reactive unsaturated aldehyde widely present in the environment, particularly as a product of tobacco smoke. Our previous studies indicated the adverse consequences of even short-term acrolein exposure and proposed a molecular mechanism of its potential harmful effect on oral cavity keratinocytic cells. In this paper we chose to review the broad spectrum of acrolein sources such as pollution, food, and smoking. Consequently, in this paper we consider a high level of oral exposure to acrolein through these sources and discuss the noxious effects it has on the oral cavity including on salivary quality and contents, oral resistance to oxidative stress, and stress mechanism activation in a variety of oral cells.
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Affiliation(s)
- Dror Aizenbud
- Department of Orthodontics and Craniofacial Anomalies, School of Graduate Dentistry, Rambam Health Care Campus, Oral Biology Research Laboratory, Technion–Ruth and Bruce Rappaport Faculty of Medicine, Haifa, Israel
- To whom correspondence should be addressed. E-mail:
| | - Itay Aizenbud
- Hebrew University, Hadassah, School of Dental Medicine, Jerusalem, Israel
| | - Abraham Z. Reznick
- Department of Anatomy and Cell Biology, Ruth and Bruce Rappaport Faculty of Medicine, Technion, Haifa, Israel
| | - Katia Avezov
- Department of Orthodontics and Craniofacial Anomalies, School of Graduate Dentistry, Rambam Health Care Campus, Oral Biology Research Laboratory, Technion–Ruth and Bruce Rappaport Faculty of Medicine, Haifa, Israel
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9
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Porterfield JP, Baraban JH, Troy TP, Ahmed M, McCarthy MC, Morgan KM, Daily JW, Nguyen TL, Stanton JF, Ellison GB. Pyrolysis of the Simplest Carbohydrate, Glycolaldehyde (CHO−CH2OH), and Glyoxal in a Heated Microreactor. J Phys Chem A 2016; 120:2161-72. [DOI: 10.1021/acs.jpca.6b00652] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
| | | | - Tyler P. Troy
- Chemical
Sciences Division, Lawrence Berkeley National Laboratories, Berkeley, California 94720, United States
| | - Musahid Ahmed
- Chemical
Sciences Division, Lawrence Berkeley National Laboratories, Berkeley, California 94720, United States
| | - Michael C. McCarthy
- Harvard-Smithsonian Center for Astrophysics, Cambridge, Massachusetts 02138, United States
| | - Kathleen M. Morgan
- Department
of Chemistry, Xavier University of Louisiana, New Orleans, Louisiana 70125-1098, United States
| | | | - Thanh Lam Nguyen
- Department
of Chemistry, University of Texas at Austin, Austin, Texas 78712, United States
| | - John F. Stanton
- Department
of Chemistry, University of Texas at Austin, Austin, Texas 78712, United States
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10
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Vijayakumar S, Rajakumar B. Kinetic investigations of chlorine atom initiated photo oxidation reactions of 2,3-dimethyl-1,3-butadiene in the gas phase: an experimental and theoretical study. RSC Adv 2016. [DOI: 10.1039/c6ra11892e] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Rate coefficients for the reaction of chlorine atoms with 2,3-dimethyl-1,3-butadiene were measured over the temperature range of 269–393 K by using a relative rate experimental method with reference to isoprene and 1-pentene.
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Affiliation(s)
- S. Vijayakumar
- Department of Chemistry
- Indian Institute of Technology Madras
- Chennai 600036
- India
| | - B. Rajakumar
- Department of Chemistry
- Indian Institute of Technology Madras
- Chennai 600036
- India
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11
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Peirone SA, Cometto PM, Lane SI. OH-initiated photooxidations of 1-pentene and 2-methyl-2-propen-1-ol: mechanism and yields of the primary carbonyl products. Chemphyschem 2014; 15:3848-54. [PMID: 25186338 DOI: 10.1002/cphc.201402159] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2014] [Revised: 06/06/2014] [Indexed: 11/06/2022]
Abstract
The products of the gas-phase reactions of OH radicals with 1-pentene and 2-methyl-2-propen-1-ol (221MPO) at T=298±2 K and atmospheric pressure were investigated by using a 4500 L atmospheric simulation chamber that was built especially for this work. The molar yield of butyraldehyde was 0.74±0.12 mol for the reaction of 1-pentene. This work provides the first product molar yield determination of formaldehyde (0.82±0.12 mol), 1-hydroxypropan-2-one (0.84±0.13 mol), and methacrolein (0.078±0.012 mol) from the reaction of 221MPO with OH radicals. The mechanism of this reaction is discussed in relation to the experimental results. Additionally, taking into consideration the complex mechanism, the rate coefficients of the reactions of OH with formaldehyde, 1-hydroxypropan-2-one, and methacrolein were derived at atmospheric pressure and T=298±2 K.; the obtained values were (8.9±1.6)×10(-12) , (2.4±1.4)×10(-12) , and (22.9±2.3)×10(-12) cm(3) molecule(-1) s(-1) , respectively.
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Affiliation(s)
- Silvina A Peirone
- Instituto de Investigaciones en Fisicoquímica de Córdoba (INFIQC), CONICET and Centro Láser de Ciencias Moleculares, Departamento de Fisicoquímica, Facultad de Ciencias Químicas, Universidad Nacional de Córdoba. Ciudad Universitaria, 5000 Córdoba (Argentina), Fax: (+54) 351-433-41-48
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12
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Schilling Fahnestock KA, Yee LD, Loza CL, Coggon MM, Schwantes R, Zhang X, Dalleska NF, Seinfeld JH. Secondary Organic Aerosol Composition from C12 Alkanes. J Phys Chem A 2014; 119:4281-97. [DOI: 10.1021/jp501779w] [Citation(s) in RCA: 44] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
| | - Lindsay D. Yee
- Division
of Engineering and Applied Science, California Institute of Technology, Pasadena, California 91125, United States
| | - Christine L. Loza
- Division
of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Matthew M. Coggon
- Division
of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
| | - Rebecca Schwantes
- Division
of Engineering and Applied Science, California Institute of Technology, Pasadena, California 91125, United States
| | - Xuan Zhang
- Division
of Engineering and Applied Science, California Institute of Technology, Pasadena, California 91125, United States
| | - Nathan F. Dalleska
- Division
of Engineering and Applied Science, California Institute of Technology, Pasadena, California 91125, United States
| | - John H. Seinfeld
- Division
of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, United States
- Division
of Engineering and Applied Science, California Institute of Technology, Pasadena, California 91125, United States
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Kovacevic G, Sabljic A. Mechanisms and reaction-path dynamics of hydroxyl radical reactions with aromatic hydrocarbons: the case of chlorobenzene. CHEMOSPHERE 2013; 92:851-856. [PMID: 23694732 DOI: 10.1016/j.chemosphere.2013.04.041] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/14/2012] [Revised: 02/22/2013] [Accepted: 04/15/2013] [Indexed: 06/02/2023]
Abstract
All geometries and energies significant for the first step of tropospheric degradation of chlorobenzene were characterized using the MP2/6-31+G(d,p) and G3 methods. A pre-reaction complex for the addition of OH radical to chlorobenzene was found and the associated transition state was determined for the first time. The reaction path for the association of OH radical and chlorobenzene into the pre-reaction complex was extrapolated from the selected low frequency normal mode of pre-reaction complex. The reaction rate constant for addition of OH radical to chlorobenzene was determined for the temperature range 230-330K, using RRKM theory and G3 energies. The calculated rate constants are in agreement with the experimental results. Regioselectivity was also determined for the title reaction from the ratio of respective reaction rates and our results are in very good agreement with the experimental results, which show the dominance of the ortho and para channels as well as a negligible contribution by the ipso channel.
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Affiliation(s)
- Goran Kovacevic
- Institute Rudjer Boskovic, POB 180, HR-10002 Zagreb, Croatia
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14
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Fang W, Gong L, Zhang Q, Cao M, Li Y, Sheng L. Measurements of secondary organic aerosol formed from OH-initiated photo-oxidation of isoprene using online photoionization aerosol mass spectrometry. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2012; 46:3898-904. [PMID: 22397593 DOI: 10.1021/es204669d] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/24/2023]
Abstract
Isoprene is a significant source of atmospheric organic aerosol; however, the secondary organic aerosol (SOA) formation and involved chemical reaction pathways have remained to be elucidated. Recent works have shown that the photo-oxidation of isoprene leads to form SOA. In this study, the chemical composition of SOA from the OH-initiated photo-oxidation of isoprene, in the absence of seed aerosols, was investigated through the controlled laboratory chamber experiments. Thermal desorption/tunable vacuum-ultraviolet photoionization time-of-flight aerosol mass spectrometry (TD-VUV-TOF-PIAMS) was used in conjunction with the environmental chamber to study SOA formation. The mass spectra obtained at different photon energies and the photoionization efficiency (PIE) spectra of the SOA products can be obtained in real time. Aided by the ionization energies (IE) either from the ab initio calculations or the literatures, a number of SOA products were proposed. In addition to methacrolein, methyl vinyl ketone, and 3-methyl-furan, carbonyls, hydroxycarbonyls, nitrates, hydroxynitrates, and other oxygenated compounds in SOA formed in laboratory photo-oxiadation experiments were identified, some of them were investigated for the first time. Detailed chemical identification of SOA is crucial for understanding the photo-oxidation mechanisms of VOCs and the eventual formation of SOA. Possible reaction mechanisms will be discussed.
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Affiliation(s)
- Wenzheng Fang
- National Synchrotron Radiation Laboratory, School of Nuclear Science and Technology, University of Science and Technology of China, Hefei 230029, China.
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15
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Ghosh B, Park J, Anderson KC, North SW. OH initiated oxidation of 1,3-butadiene in the presence of O2 and NO. Chem Phys Lett 2010. [DOI: 10.1016/j.cplett.2010.05.056] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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16
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Ghosh B, Bugarin A, Connell BT, North SW. OH Radical Initiated Oxidation of 1,3-Butadiene: Isomeric Selective Study of the Dominant Addition Channel. J Phys Chem A 2010; 114:5299-305. [DOI: 10.1021/jp1006878] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Buddhadeb Ghosh
- Department of Chemistry, Texas A&M University, P.O. Box 30012, College Station, Texas 77842
| | - Alejandro Bugarin
- Department of Chemistry, Texas A&M University, P.O. Box 30012, College Station, Texas 77842
| | - Brian T. Connell
- Department of Chemistry, Texas A&M University, P.O. Box 30012, College Station, Texas 77842
| | - Simon W. North
- Department of Chemistry, Texas A&M University, P.O. Box 30012, College Station, Texas 77842
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17
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García MPGI, Sanroma AM, Porrero MPM, Valle AT, Galán BC, Muñoz MSS. Reactivity of 2-ethyl-1-hexanol in the atmosphere. Phys Chem Chem Phys 2010; 12:3294-300. [DOI: 10.1039/b923899a] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
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18
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Cabañas B, Tapia A, Villanueva F, Salgado S, Monedero E, Martín P. Kinetic study of 2-furanaldehyde, 3-furanaldehyde, and 5-methyl-2-furanaldehyde reactions initiated by Cl atoms. INT J CHEM KINET 2008. [DOI: 10.1002/kin.20348] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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19
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Abstract
Oxidation of isoprene by the hydroxyl radical leads to tropospheric ozone formation. Consequently, a more complete understanding of this reaction could lead to better models of regional air quality, a better understanding of aerosol formation, and a better understanding of reaction kinetics and dynamics. The most common first step in the oxidation of isoprene is the formation of an adduct, with the hydroxyl radical adding to one of four unsaturated carbon atoms in isoprene. In this paper, we discuss how the initial conformations of isoprene, s-trans and s-gauche, influences the pathways to adduct formation. We explore the formation of pre-reactive complexes at low and high temperatures, which are often invoked to explain the negative temperature dependence of this reaction's kinetics. We show that at higher temperatures the free energy surface indicates that a pre-reactive complex is unlikely, while at low temperatures the complex exists on two reaction pathways. The theoretical results show that at low temperatures all eight pathways possess negative reaction barriers, and reaction energies that range from -36.7 to -23.0 kcal x mol(-1). At temperatures in the lower atmosphere, all eight pathways possess positive reaction barriers that range from 3.8 to 6.0 kcal x mol(-1) and reaction energies that range from -28.8 to -14.4 kcal x mol(-1).
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Affiliation(s)
- Marco A. Allodi
- Department of Chemistry, Center for Molecular Design, Hamilton College, 198 College Hill Road, Clinton, NY 13323
| | - Karl N. Kirschner
- Department of Chemistry, Center for Molecular Design, Hamilton College, 198 College Hill Road, Clinton, NY 13323
| | - George C. Shields
- Department of Chemistry, Center for Molecular Design, Hamilton College, 198 College Hill Road, Clinton, NY 13323
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20
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Vimal D, Pacheco AB, Iyengar SS, Stevens PS. Experimental and ab initio dynamical investigations of the kinetics and intramolecular energy transfer mechanisms for the OH + 1,3-butadiene reaction between 263 and 423 K at low pressure. J Phys Chem A 2008; 112:7227-37. [PMID: 18636694 DOI: 10.1021/jp8003882] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The rate constants for the reaction of the OH radical with 1,3-butadiene and its deuterated isotopomer has been measured at 1-6 Torr total pressure over the temperature range of 263-423 K using the discharge flow system coupled with resonance fluorescence/laser-induced fluorescence detection of OH. The measured rate constants for the OH + 1,3-butadiene and OH + 1,3-butadiene- d 6 reactions at room temperature were found to be (6.98 +/- 0.28) x 10 (-11) and (6.94 +/- 0.38) x 10 (-11) cm (3) molecule (-1) s (-1), respectively, in good agreement with previous measurements at higher pressures. An Arrhenius expression for this reaction was determined to be k 1 (II)( T) = (7.23 +/- 1.2) x10 (-11)exp[(664 +/- 49)/ T] cm (3) molecule (-1) s (-1) at 263-423 K. The reaction was found to be independent of pressure between 1 and 6 Torr and over the temperature range of 262- 423 K, in contrast to previous results for the OH + isoprene reaction under similar conditions. To help interpret these results, ab initio molecular dynamics results are presented where the intramolecular energy redistribution is analyzed for the product adducts formed in the OH + isoprene and OH + butadiene reactions.
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Affiliation(s)
- Deepali Vimal
- Center for Research in Environmental Science, School of Public and Environmental Affairs, Indiana University, Bloomington, Indiana 47405, USA
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21
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Pacolay BD, Ham JE, Slaven JE, Wells JR. Feasibility of detection and quantification of gas-phase carbonyls in indoor environments using PFBHA derivatization and solid-phase microextraction (SPME). ACTA ACUST UNITED AC 2008; 10:853-60. [PMID: 18688453 DOI: 10.1039/b801926f] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Solid-phase microextraction (SPME) was evaluated for the detection and quantification of the gas-phase carbonyls: citronellal, glyoxal, methylglyoxal, and beta-ionone. Prepared air samples containing the carbonyl compounds were collected at a flow rate of 2.8 L min(-1) in an impinger containing a 25% reagent water/75% methanol collection liquid. The aqueous samples were then derivatized with O-(2,3,4,5,6-pentafluorobenzyl)hydroxylamine hydrochloride (PFBHA), extracted with a PDMS/DVB coated SPME fiber, and analyzed by GC-MS. Detection limits with a sample air volume of 76 L were calculated to be 0.03 ppbv, 0.34 ppbv, 0.12 ppbv, and 0.28 ppbv for citronellal, glyoxal, methylglyoxal, and beta-ionone, respectively.
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Affiliation(s)
- Bruce D Pacolay
- Exposure Assessment Branch, Health Effects Laboratory Division, National Institute for Occupational Safety and Health, 1095 Willowdale Road, MS-3030, Morgantown, WV 26505, USA
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Berndt T, Böge O. Atmospheric Reaction of OH Radicals with 1,3-Butadiene and 4-Hydroxy-2-butenal. J Phys Chem A 2007; 111:12099-105. [DOI: 10.1021/jp075349o] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Torsten Berndt
- Leibniz-Institut für Troposphärenforschung e.V., Permoserstr. 15, 04318 Leipzig, Germany
| | - Olaf Böge
- Leibniz-Institut für Troposphärenforschung e.V., Permoserstr. 15, 04318 Leipzig, Germany
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23
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24
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Surratt JD, Murphy SM, Kroll JH, Ng NL, Hildebrandt L, Sorooshian A, Szmigielski R, Vermeylen R, Maenhaut W, Claeys M, Flagan RC, Seinfeld JH. Chemical composition of secondary organic aerosol formed from the photooxidation of isoprene. J Phys Chem A 2007; 110:9665-90. [PMID: 16884200 DOI: 10.1021/jp061734m] [Citation(s) in RCA: 525] [Impact Index Per Article: 30.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Recent work in our laboratory has shown that the photooxidation of isoprene (2-methyl-1,3-butadiene, C(5)H(8)) leads to the formation of secondary organic aerosol (SOA). In the current study, the chemical composition of SOA from the photooxidation of isoprene over the full range of NO(x) conditions is investigated through a series of controlled laboratory chamber experiments. SOA composition is studied using a wide range of experimental techniques: electrospray ionization-mass spectrometry, matrix-assisted laser desorption ionization-mass spectrometry, high-resolution mass spectrometry, online aerosol mass spectrometry, gas chromatography/mass spectrometry, and an iodometric-spectroscopic method. Oligomerization was observed to be an important SOA formation pathway in all cases; however, the nature of the oligomers depends strongly on the NO(x) level, with acidic products formed under high-NO(x) conditions only. We present, to our knowledge, the first evidence of particle-phase esterification reactions in SOA, where the further oxidation of the isoprene oxidation product methacrolein under high-NO(x) conditions produces polyesters involving 2-methylglyceric acid as a key monomeric unit. These oligomers comprise approximately 22-34% of the high-NO(x) SOA mass. Under low-NO(x) conditions, organic peroxides contribute significantly to the low-NO(x) SOA mass (approximately 61% when SOA forms by nucleation and approximately 25-30% in the presence of seed particles). The contribution of organic peroxides in the SOA decreases with time, indicating photochemical aging. Hemiacetal dimers are found to form from C(5) alkene triols and 2-methyltetrols under low-NO(x) conditions; these compounds are also found in aerosol collected from the Amazonian rainforest, demonstrating the atmospheric relevance of these low-NO(x) chamber experiments.
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Affiliation(s)
- Jason D Surratt
- Department of Chemistry, California Institute of Technology, Pasadena, CA 91125, USA
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25
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Peeters J, Boullart W, Pultau V, Vandenberk S, Vereecken L. Structure−Activity Relationship for the Addition of OH to (Poly)alkenes: Site-Specific and Total Rate Constants. J Phys Chem A 2007; 111:1618-31. [PMID: 17298042 DOI: 10.1021/jp066973o] [Citation(s) in RCA: 93] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
A novel site-specific structure-activity relationship was developed for the site-specific addition of OH radicals to (poly)alkenes at 298 K. From a detailed structure-activity analysis of some 65 known OH + alkene and diene reactions, it appears that the total rate constant for this reaction class can be closely approximated by a sum of independent partial rate constants, ki, for addition to the specific (double-bonded) C atoms that depend only on the stability type of the ensuing radical (primary, secondary, etc.), that is, on the number of substituents on the neighboring C atom in the double bond. The (nine) independent partial rate constants, ki, were derived, and the predicted rate constants (kOH,pred = Sigmak(i)) were compared with experimental k(OH,exp) values. For noncyclic (poly)alkenes, including conjugated structures, the agreement is excellent (Delta < 10%). The SAR-predicted rate constants for cyclic (poly)alkenes are in general also within <15% of the experimental value. On the basis of this SAR, it is possible to predict the site-specific rate constants for (poly)alkene + OH reactions accurately, including larger biogenic compounds such as isoprene and terpenes. An important section is devoted to the rigorous experimental validation of the SAR predictions against direct measurements of the site-specific addition contributions within the alkene, for monoalkenes as well as conjugated alkenes. The measured site specificities are within 10-15% of the SAR predictions.
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Affiliation(s)
- J Peeters
- Department of Chemistry, University of Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium
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26
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Pacolay BD, Ham JE, Wells JR. Use of solid-phase microextraction to detect and quantify gas-phase dicarbonyls in indoor environments. J Chromatogr A 2006; 1131:275-80. [PMID: 16970961 DOI: 10.1016/j.chroma.2006.08.069] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2006] [Revised: 08/18/2006] [Accepted: 08/24/2006] [Indexed: 11/18/2022]
Abstract
Solid-phase microextraction (SPME) was evaluated for the detection and quantification of the gas-phase dicarbonyls, glyoxal (GLY) and methylglyoxal (MGLY). Additionally, polydimethylsiloxane (PDMS), polydimethylsiloxane/divinylbenzene (PDMS/DVB), and carbowax/divinylbenzene (CW/DVB) fibers were tested to determine the optimum fiber for detection of these species. GLY and MGLY were derivatized with O-(2,3,4,5,6-pentafluorobenzyl)-hydroxylamine hydrochloride (PFBHA), extracted with SPME from headspace or bag chamber and then analyzed by GC/MS. The PDMS/DVB SPME fiber for on-fiber derivatization and subsequent sampling for gas-phase methylglyoxal provided the optimum combination of analytical reproducibility and sensitivity. Linearity of the calibration curve was achieved across a range of 11-222 microg/m(3) (4-75 ppb).
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Affiliation(s)
- Bruce D Pacolay
- Exposure Assessment Branch, Health Effects Laboratory Division, National Institute for Occupational Safety and Health, 1095 Willowdale Road, Morgantown, WV 26505, USA
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27
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Popelková H, Fraaije M, Novák O, Frébortová J, Bilyeu K, Frébort I. Kinetic and chemical analyses of the cytokinin dehydrogenase-catalysed reaction: correlations with the crystal structure. Biochem J 2006; 398:113-24. [PMID: 16686601 PMCID: PMC1525011 DOI: 10.1042/bj20060280] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2006] [Revised: 04/21/2006] [Accepted: 05/11/2006] [Indexed: 11/17/2022]
Abstract
CKX (cytokinin dehydrogenase) is a flavoprotein that cleaves cytokinins to adenine and the corresponding side-chain aldehyde using a quinone-type electron acceptor. In the present study, reactions of maize (Zea mays) CKX with five different substrates (N6-isopentenyladenine, trans-zeatin, kinetin, p-topolin and N-methyl-isopentenyladenine) were studied. By using stopped-flow analysis of the reductive half-reaction, spectral intermediates were observed indicative of the transient formation of a binary enzyme-product complex between the cytokinin imine and the reduced enzyme. The reduction rate was high for isoprenoid cytokinins that showed formation of a charge-transfer complex of reduced enzyme with bound cytokinin imine. For the other cytokinins, flavin reduction was slow and no charge-transfer intermediates were observed. The binary complex of reduced enzyme and imine product intermediate decays relatively slowly to form an unbound product, cytokinin imine, which accumulates in the reaction mixture. The imine product only very slowly hydrolyses to adenine and an aldehyde derived from the cytokinin N6 side-chain. Mixing of the substrate-reduced enzyme with Cu2+/imidazole as an electron acceptor to monitor the oxidative half-reaction revealed a high rate of electron transfer for this type of electron acceptor when using N6-isopentenyladenine. The stability of the cytokinin imine products allowed their fragmentation analysis and structure assessment by Q-TOF (quadrupole-time-of-flight) MS/MS. Correlations of the kinetic data with the known crystal structure are discussed for reactions with different cytokinins.
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Affiliation(s)
- Hana Popelková
- *Department of Biochemistry, Faculty of Science, Palacký University, Šlechtitelů 11, 783 71 Olomouc, Czech Republic
| | - Marco W. Fraaije
- †Laboratory of Biochemistry, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands
| | - Ondřej Novák
- ‡Laboratory of Growth Regulators, Palacký Universtity/Institute of Experimental Botany of the Academy of Science, Šlechtitelů 11, 783 71 Olomouc, Czech Republic
| | - Jitka Frébortová
- ‡Laboratory of Growth Regulators, Palacký Universtity/Institute of Experimental Botany of the Academy of Science, Šlechtitelů 11, 783 71 Olomouc, Czech Republic
| | - Kristin D. Bilyeu
- §USDA-ARS, Plant Genetics Research Unit, University of Missouri, 210 Waters Hall, Columbia, MO 65211, U.S.A
| | - Ivo Frébort
- *Department of Biochemistry, Faculty of Science, Palacký University, Šlechtitelů 11, 783 71 Olomouc, Czech Republic
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Doyle M, Sexton KG, Jeffries H, Jaspers I. Atmospheric photochemical transformations enhance 1,3-butadiene-induced inflammatory responses in human epithelial cells: The role of ozone and other photochemical degradation products. Chem Biol Interact 2006; 166:163-9. [PMID: 16860297 DOI: 10.1016/j.cbi.2006.05.016] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2005] [Revised: 04/09/2006] [Accepted: 05/25/2006] [Indexed: 10/24/2022]
Abstract
Chemistry of hazardous air pollutants has been studied for many years, yet little is known about how these chemicals, once reacted within urban atmospheres, affect healthy and susceptible individuals. Once released into the atmosphere, 1,3-butadiene (BD) reacts with hydroxyl radicals and ozone (created by photochemical processes), to produce many identified and unidentified products. Once this transformation has occurred, the toxic potential of atmospheric pollutants such as BD in the ambient environment is currently unclear. During this study, environmental irradiation chambers (also called smog chambers), utilizing natural sunlight, were used to create photochemical transformations of BD. The smog chamber/in vitro exposure system was designed to investigate the toxicity of chemicals before and after photochemical reactions and to investigate interactions with the urban atmosphere using representative in vitro samples. In this study, we determined the relative toxicity and inflammatory gene expression induced by coupling smog chamber atmospheres with an in vitro system to expose human respiratory epithelial cells to BD, BDs photochemical degradation products, or the equivalent ozone generated within the photochemical mixture. Exposure to the photochemically generated products of BD (primarily acrolein, acetaldehyde, formaldehyde, furan and ozone) induced significant increases in cytotoxicity, IL-8, and IL-6 gene expression compared to a synthetic mixture of primary products that was created by injecting the correct concentrations of the detected products from the irradiation experiments. Interestingly, exposure to the equivalent levels of ozone generated during the photochemical transformation of BD did not induce the same level of inflammatory cytokine release for either exposure protocol, suggesting that the effects from ozone alone do not account for the entire response in the irradiation experiments. These results indicate that BDs full photochemical product generation and interactions, rather than ozone alone, must be carefully evaluated when investigating the possible adverse health effects to BD exposures. The research presented here takes into account that photochemical transformations of hazardous air pollutants (HAPs) does generate a dynamic exposure system and therefore provides a more realistic approach to estimate the toxicity of ambient air pollutants once they are released into the atmosphere.
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Affiliation(s)
- Melanie Doyle
- Department of Environmental Sciences and Engineering, University of North Carolina-Chapel Hill, CB #7431, Chapel Hill, NC 27599, USA.
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29
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Chen PS, Huang SD. Coupled two-step microextraction devices with derivatizations to identify hydroxycarbonyls in rain samples by gas chromatography-mass spectrometry. J Chromatogr A 2006; 1118:161-7. [PMID: 16643930 DOI: 10.1016/j.chroma.2006.03.122] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2006] [Revised: 03/31/2006] [Accepted: 03/31/2006] [Indexed: 11/25/2022]
Abstract
Coupling a two-step liquid-phase microextraction (LPME) with O-(2,3,4,5,6-pentafluorobenzyl)-hydroxylamine/bis(trimethylsilyl)trifluoroacetamide (PFBHA)/(BSTFA) derivatization was developed to detect hydroxycarbonyls in rainwater samples using gas chromatography-mass spectrometry (GC-MS). LPME provides a fast and inexpensive pre-concentration, and miniaturized extraction to analyze the target compounds rainwater samples. Derivatization techniques offer a clear method to identify target compounds. The hydroxycarbonyls were determined using two-step derivatizations. Dynamic-LPME was applied in the first derivatization, and head-space single drop derivatization was employed in the second reaction. The LODs varied from 0.023 to 4.75 microg/l. The calibration curves were linear for at least two orders of magnitude with R2>or=0.994. The precision was within 6.5-12%, and the relative recoveries in rainwater were more than 89% (the amount added ranged from 0.3 to 15 microg/l). A field sample was found to contain 2.54 microg/l of hydroxyacetone and 0.110 microg/l of 3-hydroxy-2-butanone. Hydroxyacetone was also detected in one of the tested samples at a concentration of 2.39 microg/l.
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Affiliation(s)
- Pai-Shan Chen
- Department of Chemistry, National Tsing Hua University, Hsinchu 30013, Taiwan
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30
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Kroll JH, Ng NL, Murphy SM, Flagan RC, Seinfeld JH. Secondary organic aerosol formation from isoprene photooxidation. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2006; 40:1869-77. [PMID: 16570610 DOI: 10.1021/es0524301] [Citation(s) in RCA: 222] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
Recent work has shown that the atmospheric oxidation of isoprene (2-methyl-1,3-butadiene, C5H8) leads to the formation of secondary organic aerosol (SOA). In this study, the mechanism of SOA formation by isoprene photooxidation is comprehensively investigated, by measurements of SOA yields over a range of experimental conditions, namely isoprene and NOx concentrations. Hydrogen peroxide is used as the radical precursor, substantially constraining the observed gas-phase chemistry; all oxidation is dominated by the OH radical, and organic peroxy radicals (RO2) react only with HO2 (formed in the OH + H2O2 reaction) or NO concentrations, including NOx-free conditions. At high NOx, yields are found to decrease substantially with increasing [NOx], indicating the importance of RO2 chemistry in SOA formation. Under low-NOx conditions, SOA mass is observed to decay rapidly, a result of chemical reactions of semivolatile SOA components, most likely organic hydroperoxides.
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Affiliation(s)
- Jesse H Kroll
- Departments of Environmental Science and Engineering and Chemical Engineering, California Institute of Technology, Pasadena, California 91125, USA
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31
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Lee A, Goldstein AH, Kroll JH, Ng NL, Varutbangkul V, Flagan RC, Seinfeld JH. Gas-phase products and secondary aerosol yields from the photooxidation of 16 different terpenes. ACTA ACUST UNITED AC 2006. [DOI: 10.1029/2006jd007050] [Citation(s) in RCA: 285] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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32
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Cassanelli P, Cox RA, Orlando JJ, Tyndall GS. An FT-IR study of the isomerization of 1-butoxy radicals under atmospheric conditions. J Photochem Photobiol A Chem 2006. [DOI: 10.1016/j.jphotochem.2005.11.001] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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