Oxidative Verdoheme Formation and Stabilization by Axial Isocyanide Ligation

Synthesis and crystal structure of bis-(tert-butyl isocyanide-κC)[5,10,15,20-tetra-kis-(4-chloro-phen-yl)porphyrinato-κ4N]iron(II)

In the title compound, [FeII(C44H24Cl4N4)(C5H9N)2] or [FeII(TClPP)(t-BuNC)2] [where TClPP and t-BuNC are 5,10,15,20-tetra-kis-(4-chloro-phen-yl)porphyrinate and tert-butyl isocyanide ligands, respectively], the metal ion lies on an inversion center and is octa-hedrally coordinated by the N atoms of the porphyrin ring in the equatorial plane and by carbon atoms of the trans t-BuNC ligands in the axial sites. The Fe-N bond length of 2.0074 (14) Å suggests a low-spin complex (S = 0). The crystal packing of the title compound is sustained by C-H⋯Cl, C-H⋯N and C__H⋯Cg (Cg = the centroid of a pyrrole ring of the TClPP porphyrinate) inter-actions, leading to a three-dimensional network. The Hirshfeld surface (HS) analysis indicates that 61.4% of the inter-molecular inter-actions are from H⋯H contacts while other contributions are from C⋯H/H⋯C, O⋯H/H⋯O and N⋯H/H⋯N inter-actions, which comprise 21.3%, 13.3% and 3.6% of the HS, respectively.

Theoretical investigation of five-coordinated manganese(III) oxophlorin with different axial ligands at various spin states using different DFT methods

The Mn(III)-oxophlorin complexes with imidazole, pyridine and t-butylcyanide as axial ligands have been studied using B3LYP, Bv86p, and M06-2X methods. All of the possible optimized geometries are specified, while the M06-2X is employed. Results obtained show that the isomers of Mn(III)-oxophlorin with imidazole or pyridine are the most stable at quintet state, compared to singlet and triplet spin states. Besides, there are two and four [Formula: see text]-electrons on manganese in each of these complexes at triplet and quintet states, respectively. Also, Mn(III)-oxophlorin with t-butylcyanide as axial ligand is only stable at singlet state. Non-specific solvent effects show that dispersion and London forces have the basic role in stability of complexes in a solvent. Note that latter interactions can occur in medium with dielectric constant ([Formula: see text]) of [Formula: see text]8, such as [Formula: see text] for position of oxophlorin in heme oxygenase enzyme. NBO analysis show that there is no degeneracy between d orbitals of Mn in the five-coordinated Mn(III)-oxophlorin at singlet and triplet spin states, but two d orbitals of manganese are degenerated in latter complexes at quintet state. Such degeneracy of d orbitals is observed in a complex with square pyramid structure. Then five-coordinated Mn(III)-oxophlorin with imidazole or pyridine is the most stable at quintet spin state, because of its geometry corresponding to square pyramid configuration of atoms. Also, nonbounding interaction between Mn and the ring of oxophlorin or Mn and ligand are more effective in Mn(III)-oxophlorin with imidazole as axial ligand, compared to pyridine and t-butylcyanide.

Synthesis, crystal structure and characterizations of di-μ-cyanido-1:2κ2 N:C;2:3κ2 C:N-bis-(4,7,13,16,21,24-hexa-oxa-1,10-di-aza-bicyclo-[8.8.8]hexacosa-ne)-1κ8 N 1,N 10,O 4,O 7,O 13,O 16,O 21,O 24;3κ8 N 1,N 10,O 4,O 7,O 13,O 16,O 21,O 24-[5,10,15,20-tetra-kis-(4-chloro-phen-yl)porphyrinato-2κ4 N]-2-iron(II)-1,3-dipotassium(I) tetra-hydro-furan disolvate with an unknown solvent

The title compound, [Fe(C44H24N8Cl4)(CN)2][K2(C18H36N2O6)2]·2C4H8O was synthesized and characterized by single-crystal X-ray diffraction as well as FTIR and UV-vis spectroscopy. The central FeII ion is coordinated by four pyrrole N atoms of the porphyrin core and two C atoms of the cyano groups in a slightly distorted octa-hedral coordination environment. The complex mol-ecule crystallizes with two tetra-hydro-furan solvent mol-ecules, one of which was refined as disordered over two sets of sites with refined occupancies of 0.619 (5) and 0.381 (5). It has a distorted porphyrin core with mean absolute core-atom displacements Ca, Cb, Cm and Cav of 0.32 (3), 0.22 (3), 0.56 (2) and 0.37 (14) Å, respectively. The axial Fe-Ccyano bond lengths are 1.991 (2) and 1.988 (2) Å. The average Fe-Np (Np is a porphyrin N atom) bond length is 1.964 (10) Å. One of the O atoms and several C atoms of the 222 moiety [222 = 4,7,13,16,21,24-hexa-oxa-1,10-di-aza-bicyclo-[8.8.8]hexa-cosa-ne] were refined as disordered over two sets of sites with occupancy ratios of 0.739 (6):0.261 (6) and 0.832 (4):0.168 (4). Additional solvent mol-ecules were found to be highly disordered and their contribution to the scattering was removed using the SQUEEZE procedure in PLATON [Spek (2015 ▸). Acta Cryst. C71, 9-18], which indicated a solvent cavity of volume 372 Å3 containing approximately 83 electrons. These solvent mol-ecules are not considered in the given chemical formula and other crystal data.

Pitfalls in bromination reactions of zinc porphyrins: two-sided ring opening of the porphyrin macrocycle

Reaction of [Zn(II)(TTP)] (1) (TTP = dianion of 5,10,15,20-meso-tetrakis(p-tolyl)porphyrin) with 16 equiv of N-bromosuccinamide (NBS) in methanol at reflux led to the unexpected two-sidedd open-ring brominated product [Zn(II)(C26H20N2O2Br5)2] (2). Similar observations have been made with other meso-substituted zinc porphyrins as well [Zn(II)(por)] {por = dianion of 5,10,15,20-meso-tetrakis(aryl)porphyrin; aryl = phenyl (TPP), p-(t)Bu-phenyl (TBPP), m-Cl-phenyl (TClPP)}. The respective products [Zn(II)(C24H16N2O2Br5)2] (3), [Zn(II)(C32H32N2O2Br5)2] (4), and [Zn(II)(C24H14N2O2Cl2Br5)2] (5) have been isolated in good to moderate yields and characterized by elemental analysis and UV-vis, (1)H NMR, and mass spectrometry. Additional bromination reaction of 1 with 8 equiv of NBS in a chloroform/methanol mixture led (after the two-sided ring opening) to nonmetalated brominated bi(pyrrole) product, C36H34N2O4Br4 (6). The detailed structures of complexes 1, 2, 3, and 6, available in a single crystal form, have been confirmed by X-ray diffraction analysis.

Structural characterization and DFT calculation of the Fe–C coordinating bond in bis(tert-butyl isocyanide) iron(II) phthalocyanine

Bis(tert-butyl isocyanide) iron(II) phthalocyanine complex in the crystalline form was obtained by a direct reaction of β- FePc with tert-butyl isocyanide. This complex crystallizes in the centrosymmetric space group P 21/c of the monoclinic system. The Fe ( II ) cation is equatorially ligated by the four N-isoindole atoms of Pc2- macrocycle and axially by the C atom of tert-butyl isocyanide on both sides of a planar FePc molecule. Gas-phase conformation of the bis(tert-butyl isocyanide) iron(II) phthalocyanine molecule obtained by molecular orbital calculations shows a similar conformation as in the crystal. In both phases (solid and gas) a similar correlation between the equatorial Fe – N and axial Fe – C bonds are observed. Steric hindrance of the tert-butyl isocyanide molecules ligated to Fe in axial positions of planar FePc leads to the lowering of the π–π interaction between the π-clouds of Pc macrorings and makes the crystals of the bis(tert-butyl isocyanide) iron(II) phthalocyanine complex better soluble in the most organic solvents than the parent FePc compound. EPR and magnetic susceptibility measurements clearly show that ligation of the intermediate spin FePc by tert-butyl isocyanide leads to the change of the ground state from S = 1 (for FePc , eg3b2g2a1g1) to S = 0 yielding the low-spin complex (( CH 3)3 C - N ≡ C )2 FePc , eg4b2g2). The calculated three-dimensional MESP maps are helpful for understanding of the interaction between the FePc and tert-butyl isocyanide molecules forming bis(tert-butyl isocyanide) iron(II) phthalocyanine complex.

Electron Distribution in Iron Octaethyloxophlorin Complexes. Importance of the Fe(III) Oxophlorin Trianion Form in the Bis-pyridine and Bis-imidazole Complexes

The apportionment of electrons between iron and the porphyrinic macrocycle in complexes of octaethyloxophlorin (H3OEPO) has been a vexing problem. In particular, for (Py)2Fe(OEPO), which is an important intermediate in heme degradation, three resonance structures involving Fe(III), Fe(II), or Fe(I), respectively, have been considered. To clarify this matter, the electronic and geometric structures of (Py)2Fe(III)(OEPO), (Im)2Fe(III)(OEPO).2THF, and (Im)2Fe(III)(OEPO).1.6CHCl3 have been examined by single-crystal X-ray diffraction, measurement of magnetic moments as a function of temperature, and EPR and NMR spectral studies. The results clearly show that both complexes exist in the Fe(III)/oxophlorin trianion form rather than the Fe(II)/oxophlorin radical form previously established for (2,6-xylylNC)(2)Fe(II)(OEPO.). In the solid state from 10 to 300 K, (Py)2Fe(III)(OEPO) exists in the high-spin (S = 5/2) state with the axial ligands in parallel planes, a planar porphyrin, and long axial Fe-N distances. However, in solution it exists predominantly in a low-spin (S = 1/2) form. In contrast, the structures of (Im)2Fe(III)(OEPO).2THF and (Im)2Fe(III)(OEPO).1.6CHCl3 consist of porphyrins with a severe ruffled distortion, axial ligands in nearly perpendicular planes, and relatively short axial Fe-N distances. The crystallographic, magnetic, EPR, and NMR results all indicate that (Im)2Fe(III)(OEPO) exists in the low-spin Fe(III) form in both the solid state and in solution.