1
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Kagawa Y, Oohora K, Hayashi T. Intramolecular C-H bond amination catalyzed by myoglobin reconstituted with iron porphycene. J Inorg Biochem 2024; 252:112459. [PMID: 38181613 DOI: 10.1016/j.jinorgbio.2023.112459] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2023] [Revised: 12/10/2023] [Accepted: 12/16/2023] [Indexed: 01/07/2024]
Abstract
C-H bond amination is an effective way to obtain nitrogen-containing products. In this work, we demonstrate that myoglobin reconstituted with iron porphycene (rMb(FePc)) catalyzes intramolecular C(sp3)-H bond amination of arylsulfonyl azides to yield corresponding sultam analogs. The total turnover number of rMb(FePc) is up to 5.7 × 104 for the C-H bond amination of 2,4,6-triisopropylbenzenesulfonyl azide. Moreover, rMb(FePc) exhibits higher selectivity for the desired C-H bond amination than the competing azide reduction compared to native myoglobin. Kinetic studies reveal that the kcat value of rMb(FePc) is 4-fold higher than that of native myoglobin. Furthermore, H64A, H64V and H64I mutants of rMb(FePc) enhance the turnover number (TON) and enantioselectivity for the C-H bond amination of 2,4,6-triethylbenzenesulfonyl azide. The present findings indicate that iron porphycene is an attractive artificial cofactor for myoglobin toward the C-H bond amination reaction.
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Affiliation(s)
- Yoshiyuki Kagawa
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, Suita, Osaka, 565-0871, Japan
| | - Koji Oohora
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, Suita, Osaka, 565-0871, Japan; Innovative Catalysis Science Division, Institute for Open and Transdisciplinary Research Initiatives (ICS-OTRI), Osaka University, Suita, Osaka, 565-0871, Japan.
| | - Takashi Hayashi
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, Suita, Osaka, 565-0871, Japan.
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2
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Lemon CM. Diversifying the functions of heme proteins with non-porphyrin cofactors. J Inorg Biochem 2023; 246:112282. [PMID: 37320889 DOI: 10.1016/j.jinorgbio.2023.112282] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2023] [Revised: 05/09/2023] [Accepted: 05/30/2023] [Indexed: 06/17/2023]
Abstract
Heme proteins perform diverse biochemical functions using a single iron porphyrin cofactor. This versatility makes them attractive platforms for the development of new functional proteins. While directed evolution and metal substitution have expanded the properties, reactivity, and applications of heme proteins, the incorporation of porphyrin analogs remains an underexplored approach. This review discusses the replacement of heme with non-porphyrin cofactors, such as porphycene, corrole, tetradehydrocorrin, phthalocyanine, and salophen, and the attendant properties of these conjugates. While structurally similar, each ligand exhibits distinct optical and redox properties, as well as unique chemical reactivity. These hybrids serve as model systems to elucidate the effects of the protein environment on the electronic structure, redox potentials, optical properties, or other features of the porphyrin analog. Protein encapsulation can confer distinct chemical reactivity or selectivity of artificial metalloenzymes that cannot be achieved with the small molecule catalyst alone. Additionally, these conjugates can interfere with heme acquisition and uptake in pathogenic bacteria, providing an inroad to innovative antibiotic strategies. Together, these examples illustrate the diverse functionality that can be achieved by cofactor substitution. The further expansion of this approach will access unexplored chemical space, enabling the development of superior catalysts and the creation of heme proteins with emergent properties.
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Affiliation(s)
- Christopher M Lemon
- Department of Chemistry and Biochemistry, Montana State University, PO Box 173400, Bozeman, MT 59717, United States.
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3
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Ni Y, Lu Y, Zhang K, Chen J. Aromaticity/Antiaromaticity Effect on Activity of Transition Metal Macrocyclic Complexes towards Electrocatalytic Oxygen Reduction. CHEMSUSCHEM 2021; 14:1835-1839. [PMID: 33605052 DOI: 10.1002/cssc.202100182] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/22/2021] [Revised: 02/15/2021] [Indexed: 06/12/2023]
Abstract
The effect of the coordination sphere around metal centers on the oxygen reduction reaction (ORR) activity of transition metal macrocyclic complexes is still unclear. Here, the aromaticity/antiaromaticity effect of macrocycles on ORR activity was investigated based on TM norcorrole (TM=Mn, Fe, Co, Ni), TM porphycene, and TM porphyrin by first-principle calculations. It was found that the complexes with weaker aromatic macrocycles exhibited a stronger adsorption strength while the complexes with antiaromatic macrocycles showed further enhanced adsorption strengths. Further investigations indicated that the variation in the adsorption strengths of catalysts was attributed to the different redox activities of macrocycles with different aromaticities. Such difference in redox activities of macrocycles was reflected in the activities of metal centers via d-π conjugation, which acted as a bridge between π-electrons on macrocycles and active d-electrons on metal centers. This work deepens the understanding of the role of macrocycles in oxygen electroreduction.
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Affiliation(s)
- Youxuan Ni
- Key Laboratory of Advanced Energy Materials Chemistry (Ministry of Education), Renewable Energy Conversion and Storage Center (RECAST), College of Chemistry, Nankai University, Tianjin, 300071, P. R. China
| | - Yong Lu
- Key Laboratory of Advanced Energy Materials Chemistry (Ministry of Education), Renewable Energy Conversion and Storage Center (RECAST), College of Chemistry, Nankai University, Tianjin, 300071, P. R. China
| | - Kai Zhang
- Key Laboratory of Advanced Energy Materials Chemistry (Ministry of Education), Renewable Energy Conversion and Storage Center (RECAST), College of Chemistry, Nankai University, Tianjin, 300071, P. R. China
| | - Jun Chen
- Key Laboratory of Advanced Energy Materials Chemistry (Ministry of Education), Renewable Energy Conversion and Storage Center (RECAST), College of Chemistry, Nankai University, Tianjin, 300071, P. R. China
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4
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Listkowski A, Kharchenko A, Ciąćka P, Kijak M, Masiera N, Rybakiewicz R, Luboradzki R, Fita P, Waluk J. Fluorinated Porphycenes: Synthesis, Spectroscopy, Photophysics, and Tautomerism. Chempluschem 2020; 85:2197-2206. [DOI: 10.1002/cplu.202000517] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2020] [Revised: 09/08/2020] [Indexed: 11/05/2022]
Affiliation(s)
- Arkadiusz Listkowski
- Institute of Physical Chemistry Polish Academy of Sciences Kasprzaka 44 01-224 Warsaw Poland
- Faculty of Mathematics and Natural Sciences College of Science Cardinal Stefan Wyszyński University Dewajtis 5 01-815 Warsaw Poland
| | - Anastasiia Kharchenko
- Institute of Physical Chemistry Polish Academy of Sciences Kasprzaka 44 01-224 Warsaw Poland
| | - Piotr Ciąćka
- Institute of Experimental Physics Faculty of Physics University of Warsaw Pasteura 5 02-093 Warsaw Poland
- Institute of Physical Chemistry Polish Academy of Sciences Kasprzaka 44 01-224 Warsaw Poland
| | - Michał Kijak
- Institute of Physical Chemistry Polish Academy of Sciences Kasprzaka 44 01-224 Warsaw Poland
| | - Natalia Masiera
- Institute of Physical Chemistry Polish Academy of Sciences Kasprzaka 44 01-224 Warsaw Poland
| | - Renata Rybakiewicz
- Faculty of Mathematics and Natural Sciences College of Science Cardinal Stefan Wyszyński University Dewajtis 5 01-815 Warsaw Poland
| | - Roman Luboradzki
- Institute of Physical Chemistry Polish Academy of Sciences Kasprzaka 44 01-224 Warsaw Poland
| | - Piotr Fita
- Institute of Experimental Physics Faculty of Physics University of Warsaw Pasteura 5 02-093 Warsaw Poland
| | - Jacek Waluk
- Institute of Physical Chemistry Polish Academy of Sciences Kasprzaka 44 01-224 Warsaw Poland
- Faculty of Mathematics and Natural Sciences College of Science Cardinal Stefan Wyszyński University Dewajtis 5 01-815 Warsaw Poland
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5
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Watanabe M, Kanai Y, Nakamura S, Nishimura R, Shibata T, Momotake A, Yanagisawa S, Ogura T, Matsuo T, Hirota S, Neya S, Suzuki A, Yamamoto Y. Synergistic Effect of Distal Polar Interactions in Myoglobin and Their Structural Consequences. Inorg Chem 2018; 57:14269-14279. [DOI: 10.1021/acs.inorgchem.8b02302] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
| | | | | | | | | | | | - Sachiko Yanagisawa
- Department of Life Science, Graduate School of Life Science, University of Hyogo,
Sayo-cho, Sayo-gun, Hyogo 678-1297, Japan
| | - Takashi Ogura
- Department of Life Science, Graduate School of Life Science, University of Hyogo,
Sayo-cho, Sayo-gun, Hyogo 678-1297, Japan
| | - Takashi Matsuo
- Division of Materials Science, Graduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma, Nara 630-0192, Japan
| | - Shun Hirota
- Division of Materials Science, Graduate School of Science and Technology, Nara Institute of Science and Technology, Ikoma, Nara 630-0192, Japan
| | - Saburo Neya
- Department of Physical Chemistry, Graduate School of Pharmaceutical Sciences, Chiba University, Chuoh-Inohana, Chiba 260-8675, Japan
| | - Akihiro Suzuki
- Department of Materials Engineering, National Institute of Technology, Nagaoka College, Nagaoka 940-8532, Japan
| | - Yasuhiko Yamamoto
- Life Science Center for Survival Dynamics, Tsukuba Advanced Research Alliance, University of Tsukuba, Tsukuba 305-8577, Japan
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6
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Nishiura T, Chiba Y, Nakazawa J, Hikichi S. Tuning the O2 Binding Affinity of Cobalt(II) Centers by Changing the Structural and Electronic Properties of the Distal Substituents on Azole-Based Chelating Ligands. Inorg Chem 2018; 57:14218-14229. [DOI: 10.1021/acs.inorgchem.8b02241] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Toshiki Nishiura
- Department of Material and Life Chemistry, Faculty of Engineering, Kanagawa University 3-27-1 Rokkakubashi, Kanagawa-ku, Yokohama 221-8686, Japan
| | - Yosuke Chiba
- Department of Material and Life Chemistry, Faculty of Engineering, Kanagawa University 3-27-1 Rokkakubashi, Kanagawa-ku, Yokohama 221-8686, Japan
| | - Jun Nakazawa
- Department of Material and Life Chemistry, Faculty of Engineering, Kanagawa University 3-27-1 Rokkakubashi, Kanagawa-ku, Yokohama 221-8686, Japan
| | - Shiro Hikichi
- Department of Material and Life Chemistry, Faculty of Engineering, Kanagawa University 3-27-1 Rokkakubashi, Kanagawa-ku, Yokohama 221-8686, Japan
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7
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Ono T, Koga D, Yoza K, Hisaeda Y. The first synthesis of meso-dicycloalkylporphycenes: ring strain effects on structural and optical properties of isomeric porphyrins. Chem Commun (Camb) 2017; 53:12258-12261. [DOI: 10.1039/c7cc07170a] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Two novel meso-dicycloalkylporphycenes were synthesized for the first time, which showed remarkable ring-strain-induced switching of their fluorescence behaviors in the solution phase.
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Affiliation(s)
- Toshikazu Ono
- Department of Chemistry and Biochemistry
- Graduate School of Engineering
- Kyushu University
- Fukuoka 819-0395
- Japan
| | - Daiki Koga
- Department of Chemistry and Biochemistry
- Graduate School of Engineering
- Kyushu University
- Fukuoka 819-0395
- Japan
| | - Kenji Yoza
- Japan Bruker AXS K.K
- Yokohama 221-0022
- Japan
| | - Yoshio Hisaeda
- Department of Chemistry and Biochemistry
- Graduate School of Engineering
- Kyushu University
- Fukuoka 819-0395
- Japan
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8
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Yoshimoto S, Kawamoto T, Okawara T, Hisaeda Y, Abe M. Conformational Change in Molecular Assembly of Nickel(II) Tetra(n-propyl)porphycene Triggered by Potential Manipulation. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2016; 32:13635-13639. [PMID: 27936790 DOI: 10.1021/acs.langmuir.6b03782] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Metal-coordinated porphyrin and related compounds are important for developing molecular architectures that mimic enzymes. Porphycene, a structural isomer of porphyrin, has shown unique properties in semiartificial myoglobin. To explore its potential as a molecular building block, we studied the molecular assembly of nickel(II) tetra(n-propyl)porphycene (NiTPrPc), a metalloporphycene with introduced tetra n-propyl moieties, on the Au(111) electrode surface using in situ scanning tunneling microscopy. Because of the low molecular symmetry of NiTPrPc, the molecular assembly undergoes unique phase transitions due to conformational change of the n-propyl moieties. The phase transitions can be precisely controlled by the electrode potential, demonstrating that the latter can play an important role in the porphycene molecular assembly on Au surface. This new discovery indicates possible uses of this porphycene framework in molecular engineering.
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Affiliation(s)
- Soichiro Yoshimoto
- Priority Organization for Innovation and Excellence, Kumamoto University , 2-39-1 Kurokami, Chuo-ku, Kumamoto 860-8555, Japan
| | - Teppei Kawamoto
- Graduate School of Science and Technology, Kumamoto University , 2-39-1 Kurokami, Chuo-ku, Kumamoto 860-8555, Japan
| | - Toru Okawara
- Department of Chemistry and Biochemistry, Graduate School of Engineering, Kyushu University , 744, Moto-oka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Yoshio Hisaeda
- Department of Chemistry and Biochemistry, Graduate School of Engineering, Kyushu University , 744, Moto-oka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Masaaki Abe
- Department of Chemistry and Biochemistry, Graduate School of Engineering, Kyushu University , 744, Moto-oka, Nishi-ku, Fukuoka 819-0395, Japan
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9
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Abstract
Tautomerization in porphycenes, constitutional isomers of porphyrins, is strongly entangled with spectral and photophysical parameters. The intramolecular double hydrogen transfer occurring in the ground and electronically excited states leads to uncommon spectroscopic characteristics, such as depolarized emission, viscosity-dependent radiationless depopulation, and vibrational-mode-specific tunneling splittings. This review starts with documentation of the electronic spectra of porphycenes: Absorption and magnetic circular dichroism are discussed, together with their analysis based on the perimeter model. Next, photophysical characteristics are presented, setting the stage for the final part, which discusses the developments in research on tautomerism. Porphycenes have been studied in different experimental regimes: molecules in condensed phases, isolated in supersonic jets and helium nanodroplets, and, recently also on the level of single molecules investigated by optical and scanning probe microscopies. Because of the rich and detailed information obtained from these diverse investigations, porphycenes emerge as very good models for studying the complex, multidimensional phenomena involved in the process of intramolecular double hydrogen transfer.
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Affiliation(s)
- Jacek Waluk
- Institute of Physical Chemistry, Polish Academy of Sciences , 01-224 Warsaw, Kasprzaka 44/52, Poland.,Faculty of Mathematics and Science, Cardinal Stefan Wyszyński University , Dewajtis 5, 01-815 Warsaw, Poland
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10
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11
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Abstract
Sensing of metal ions and anions is of great importance because of their widespread distribution in environmental systems and biological processes. Colorimetric and fluorescent chemosensors based on organic molecular species have been demonstrated to be effective for the detection of various ions and possess the significant advantages of low cost, high sensitivity, and convenient implementation. Of the available classes of organic molecules, porphyrin analogues possess inherently many advantageous features, making them suitable for the design of ion chemosensors, with the targeted sensing behavior achieved and easily modulated based on their following characteristics: (1) NH moieties properly disposed for binding of anions through cooperative hydrogen-bonding interactions; (2) multiple pyrrolic N atoms or other heteroatoms for selectively chelating metal ions; (3) variability of macrocycle size and peripheral substitution for modulation of ion selectivity and sensitivity; and (4) tunable near-infrared emission and good biocompatibility. In this Review, design strategies, sensing mechanisms, and sensing performance of ion chemosensors based on porphyrin analogues are described by use of extensive examples. Ion chemosensors based on normal porphyrins and linear oligopyrroles are also briefly described. This Review provides valuable information for researchers of related areas and thus may inspire the development of more practical and effective approaches for designing high-performance ion chemosensors based on porphyrin analogues and other relevant compounds.
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Affiliation(s)
- Yubin Ding
- Key Laboratory for Advanced Materials and Institute of Fine Chemicals, Shanghai Key Laboratory of Functional Materials Chemistry, East China University of Science and Technology , Shanghai 200237, P. R. China.,Department of Biomedical Engineering, College of Engineering and Applied Sciences, Nanjing University , Nanjing, Jiangsu 210093, China
| | - Wei-Hong Zhu
- Key Laboratory for Advanced Materials and Institute of Fine Chemicals, Shanghai Key Laboratory of Functional Materials Chemistry, East China University of Science and Technology , Shanghai 200237, P. R. China
| | - Yongshu Xie
- Key Laboratory for Advanced Materials and Institute of Fine Chemicals, Shanghai Key Laboratory of Functional Materials Chemistry, East China University of Science and Technology , Shanghai 200237, P. R. China
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12
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Ono T, Hisaoka Y, Onoda A, Oohora K, Hayashi T. Oxygen-binding Protein Fiber and Microgel: Supramolecular Myoglobin-Poly(acrylate) Conjugates. Chem Asian J 2016; 11:1036-42. [DOI: 10.1002/asia.201501415] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2015] [Indexed: 12/30/2022]
Affiliation(s)
- Toshikazu Ono
- Department of Chemistry and Biochemistry, Center for Molecular Systems (CMS); Kyushu University; 744 Motooka, Nishi-ku Fukuoka 819-0395 Japan
- Japan Science and Technology Agency (JST)-PRESTO; 4-1-8 Honcho, Kawaguchi Saitama 332-0012 Japan
- Department of Applied Chemistry; Graduate School of Engineering; Osaka University; Suita 565-0871 Japan
| | - Yasushi Hisaoka
- Department of Applied Chemistry; Graduate School of Engineering; Osaka University; Suita 565-0871 Japan
| | - Akira Onoda
- Department of Applied Chemistry; Graduate School of Engineering; Osaka University; Suita 565-0871 Japan
| | - Koji Oohora
- Department of Applied Chemistry; Graduate School of Engineering; Osaka University; Suita 565-0871 Japan
- Frontier Research Base for Global Young Researchers; Graduate School of Engineering; Osaka University; 2-1 Yamadaoka Suita Osaka 565-0871 Japan
| | - Takashi Hayashi
- Department of Applied Chemistry; Graduate School of Engineering; Osaka University; Suita 565-0871 Japan
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13
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Kanai Y, Nishimura R, Nishiyama K, Shibata T, Yanagisawa S, Ogura T, Matsuo T, Hirota S, Neya S, Suzuki A, Yamamoto Y. Effects of Heme Electronic Structure and Distal Polar Interaction on Functional and Vibrational Properties of Myoglobin. Inorg Chem 2016; 55:1613-22. [DOI: 10.1021/acs.inorgchem.5b02520] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Yuki Kanai
- Department of Chemistry, University of Tsukuba, Tsukuba 305-8571, Japan
| | - Ryu Nishimura
- Department of Chemistry, University of Tsukuba, Tsukuba 305-8571, Japan
| | - Kotaro Nishiyama
- Department of Chemistry, University of Tsukuba, Tsukuba 305-8571, Japan
| | - Tomokazu Shibata
- Department of Chemistry, University of Tsukuba, Tsukuba 305-8571, Japan
| | - Sachiko Yanagisawa
- Department of Life
Science, Graduate School of Life Science, University of Hyogo, RSC-UH Leading Program Center, Sayo-cho, Sayo-gun, Hyogo 679-5148, Japan
| | - Takashi Ogura
- Department of Life
Science, Graduate School of Life Science, University of Hyogo, RSC-UH Leading Program Center, Sayo-cho, Sayo-gun, Hyogo 679-5148, Japan
| | - Takashi Matsuo
- Graduate School of
Materials Science, Nara Institute of Science and Technology, Ikoma, Nara 630-0192, Japan
| | - Shun Hirota
- Graduate School of
Materials Science, Nara Institute of Science and Technology, Ikoma, Nara 630-0192, Japan
| | - Saburo Neya
- Department of Physical Chemistry, Graduate School of Pharmaceutical
Sciences, Chiba University, Chuoh-Inohana, Chiba 260-8675, Japan
| | - Akihiro Suzuki
- Department
of Materials Engineering, Nagaoka National College of Technology, Nagaoka 940-8532, Japan
| | - Yasuhiko Yamamoto
- Department of Chemistry, University of Tsukuba, Tsukuba 305-8571, Japan
- Life Science
Center of Tsukuba Advanced Research Alliance, University of Tsukuba, Tsukuba 305-8577, Japan
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14
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Cowie TY, Kennedy L, Żurek JM, Paterson MJ, Bebbington MWP. Crossed McMurry Coupling Reactions for Porphycenic Macrocycles: Non-Statistical Selectivity and Rationalisation. European J Org Chem 2015. [PMID: 26213484 PMCID: PMC4502767 DOI: 10.1002/ejoc.201500221] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
Crossed McMurry reactions of bifuran- or bithiophenedicarbaldehydes with bipyrroledicarbaldehydes have been studied for the first time. Only those porphycenic macrocycles derived from homocoupled McMurry products were formed. The results are explained by using both density functional theory and electron propagator computations to model the electron affinity of the dialdehyde starting materials. It was predicted that bifuran\bithiophene cross-coupling would indeed occur, and this was demonstrated by the first synthesis of a novel dioxa,dithio hetero-porphycenoid annulene. This approach will allow the prior identification of viable substrates for related crossed McMurry reactions.
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Affiliation(s)
- Thomas Y Cowie
- School of EPS - Institute of Chemical Sciences, Heriot-Watt University Riccarton, Edinburgh, EH14 4AS, UK E-mail: http://www.theophotochem.eps.hw.ac.uk/Home.html , http://www.hw.ac.uk/schools/engineering-physical-sciences/staff-directory/mb.htm
| | - Lorna Kennedy
- School of EPS - Institute of Chemical Sciences, Heriot-Watt University Riccarton, Edinburgh, EH14 4AS, UK E-mail: http://www.theophotochem.eps.hw.ac.uk/Home.html , http://www.hw.ac.uk/schools/engineering-physical-sciences/staff-directory/mb.htm
| | - Justyna M Żurek
- School of EPS - Institute of Chemical Sciences, Heriot-Watt University Riccarton, Edinburgh, EH14 4AS, UK E-mail: http://www.theophotochem.eps.hw.ac.uk/Home.html , http://www.hw.ac.uk/schools/engineering-physical-sciences/staff-directory/mb.htm
| | - Martin J Paterson
- School of EPS - Institute of Chemical Sciences, Heriot-Watt University Riccarton, Edinburgh, EH14 4AS, UK E-mail: http://www.theophotochem.eps.hw.ac.uk/Home.html , http://www.hw.ac.uk/schools/engineering-physical-sciences/staff-directory/mb.htm
| | - Magnus W P Bebbington
- School of EPS - Institute of Chemical Sciences, Heriot-Watt University Riccarton, Edinburgh, EH14 4AS, UK E-mail: http://www.theophotochem.eps.hw.ac.uk/Home.html , http://www.hw.ac.uk/schools/engineering-physical-sciences/staff-directory/mb.htm
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15
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Sansiaume-Dagousset E, Urvoas A, Chelly K, Ghattas W, Maréchal JD, Mahy JP, Ricoux R. Neocarzinostatin-based hybrid biocatalysts for oxidation reactions. Dalton Trans 2015; 43:8344-54. [PMID: 24728274 DOI: 10.1039/c4dt00151f] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
An anionic iron(III)-porphyrin-testosterone conjugate 1-Fe has been synthesized and fully characterized. It has been further associated with a neocarzinostatin variant, NCS-3.24, to generate a new artificial metalloenzyme following the so-called 'Trojan Horse' strategy. This new 1-Fe-NCS-3.24 biocatalyst showed an interesting catalytic activity as it was found able to catalyze the chemoselective and slightly enantioselective (ee = 13%) sulfoxidation of thioanisole by H2O2. Molecular modelling studies show that a synergy between the binding of the steroid moiety and that of the porphyrin macrocycle into the protein binding site can explain the experimental results, indicating a better affinity of 1-Fe for the NCS-3.24 variant than testosterone and testosterone-hemisuccinate themselves. They also show that the Fe-porphyrin complex is sandwiched between the two subdomains of the protein providing with good complementarities. However, the artificial cofactor entirely fills the cavity and its metal ion remains widely exposed to the solvent which explains the moderate enantioselectivity observed. Some possible improvements in the "Trojan Horse" strategy for obtaining better catalysts of selective oxidations are presented.
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Affiliation(s)
- Elodie Sansiaume-Dagousset
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, UMR 8182 CNRS, Laboratoire de Chimie Bioorganique et Bioinorganique, Bât. 420, Université Paris-sud, 91405 Orsay Cedex, France.
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16
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Onoda A, Tanaka Y, Ono T, Takeuchi S, Sakai A, Hayashi T. Myoglobin-based non-precious metal carbon catalysts for an oxygen reduction reaction. J PORPHYR PHTHALOCYA 2015. [DOI: 10.1142/s108842461550039x] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
A non-precious metal catalyst (NPMC) promoting a four-electron oxygen reduction reaction (ORR) was synthesized by heat treatment of myoglobin (Mb) containing a heme (iron protoporphyrin IX) as a source of iron, nitrogen, and carbon atoms. Samples of the mixture of Mb and carbon black (Vulcan XC72R: VC) were pyrolyzed at 740, 840, 940, 1040 or 1140°C under N 2 flow. The microstructures of the carbonized Mb catalysts were characterized by XRD, Raman spectroscopy, XPS, and TEM. Results indicate that the iron-containing active site is embedded within the surface structure in an amorphous domain of the carbon materials. The catalyst ink in a 0.05 wt% Nafion solution in isopropanol was coated onto a glassy carbon electrode and the ORR activity of Mb-based NPMCs was evaluated in a rotating disk electrode experiment in an O 2-saturated 0.1 M HClO 4 solution at 25°C. The catalyst synthesized at 940°C has the highest ORR activity in terms of the onset potential and the current density. In contrast, pyrolytic temperatures above 940°C decrease the activity, suggesting that the active structure of the catalyst apparently decomposes at higher temperatures. The Koutecky–Levich plots indicate that the Mb-based catalyst prepared at 940°C catalyzes four-electron ORR (n = ca. 4). The catalysts prepared at other temperatures have n values of 3.6 at 740°C, 3.7 at 840°C, and 2.9 at 1040°C. The ORR of Mb/VC is diffusion-controlled at potentials lower than 0.3 V (vs. RHE) and the onset potential is 0.84 ± 0.01 V.
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Affiliation(s)
- Akira Onoda
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, Suita, Osaka 565-0871, Japan
| | - Yuta Tanaka
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, Suita, Osaka 565-0871, Japan
| | - Toshikazu Ono
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, Suita, Osaka 565-0871, Japan
| | - Shotaro Takeuchi
- Department of Systems Innovation, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Akira Sakai
- Department of Systems Innovation, Graduate School of Engineering Science, Osaka University, Toyonaka, Osaka 560-8531, Japan
| | - Takashi Hayashi
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, Suita, Osaka 565-0871, Japan
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17
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Mahy JP, Maréchal JD, Ricoux R. Various strategies for obtaining oxidative artificial hemoproteins with a catalytic oxidative activity: from "Hemoabzymes" to "Hemozymes"? J PORPHYR PHTHALOCYA 2015. [DOI: 10.1142/s1088424614500813] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The design of artificial hemoproteins that could lead to new biocatalysts for selective oxidation reactions using clean oxidants such as O 2 or H 2 O 2 under ecocompatible conditions constitutes a really promising challenge for a wide range of industrial applications. In vivo, such reactions are performed by heme-thiolate proteins, cytochromes P450, that catalyze the oxidation of drugs by dioxygen in the presence of electrons delivered from NADPH by cytochrome P450 reductase. Several strategies were used to design new artificial hemoproteins to mimic these enzymes, that associate synthetic metalloporphyrin derivatives to a protein that is supposed to induce a selectivity in the catalyzed reaction. A first generation of artificial hemoproteins or "hemoabzymes" was obtained by the non-covalent association of synthetic hemes such as N-methyl-mesoporphyrin IX, Fe(III) -α3β-tetra-o-carboxyphenylporphyrin or microperoxidase 8 with monoclonal antibodies raised against these cofactors. The obtained antibody-metalloporphyrin complexes displayed a peroxidase activity and some of them catalyzed the regio-selective nitration of phenols by H 2 O 2/ NO 2 and the stereo-selective oxidation of sulphides by H 2 O 2. A second generation of artificial hemoproteins or "hemozymes", was obtained by the non-covalent association of non-relevant proteins with metalloporphyrin derivatives. Several strategies were used, the most successful of which, named "host-guest" strategy involved the non-covalent incorporation of metalloporphyrin derivatives into easily affordable proteins. The artificial hemoproteins obtained were found to be able to perform efficiently the stereoselective oxidation of organic compounds such as sulphides and alkenes by H 2 O 2 and KHSO 5.
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Affiliation(s)
- Jean-Pierre Mahy
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, UMR 8182 CNRS, Laboratoire de Chimie, Bioorganique et Bioinorganique, Bât. 420, Université Paris-sud, 91405 Orsay Cedex, France
| | - Jean-Didier Maréchal
- Departament de Química, Universitat Autònoma de Barcelona, Edifici C.n., 08193 Cerdonyola del Vallès, Barcelona, Spain
| | - Rémy Ricoux
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, UMR 8182 CNRS, Laboratoire de Chimie, Bioorganique et Bioinorganique, Bât. 420, Université Paris-sud, 91405 Orsay Cedex, France
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18
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Mahy JP, Maréchal JD, Ricoux R. From “hemoabzymes” to “hemozymes”: towards new biocatalysts for selective oxidations. Chem Commun (Camb) 2015; 51:2476-94. [DOI: 10.1039/c4cc08169b] [Citation(s) in RCA: 48] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
Abstract
Two generations of artificial hemoproteins have been obtained: “hemoabzymes”, by non-covalent association of synthetic hemes with monoclonal antibodies raised against these cofactors and “hemozymes”, by non-covalent association of non-relevant proteins with metalloporphyrin derivatives. A review of the different strategies employed as well as their structural and catalytic properties is presented here.
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Affiliation(s)
- J.-P. Mahy
- Institut de Chimie Moléculaire et des Matériaux d'Orsay
- UMR 8182 CNRS
- Laboratoire de Chimie Bioorganique et Bioinorganique
- 91435 Orsay Cedex
- France
| | - J.-D. Maréchal
- Departament de Química
- Universitat Autònoma de Barcelona
- Barcelona
- Spain
| | - R. Ricoux
- Institut de Chimie Moléculaire et des Matériaux d'Orsay
- UMR 8182 CNRS
- Laboratoire de Chimie Bioorganique et Bioinorganique
- 91435 Orsay Cedex
- France
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19
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Kuzuhara D, Yamada H, Nakaoka H, Okabe T, Aratani N. Synthesis, Properties and Crystal Structures of 2,7,12,17-Tetraarylporphycenes. HETEROCYCLES 2015. [DOI: 10.3987/com-14-s(k)101] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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20
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Urvoas A, Ghattas W, Maréchal JD, Avenier F, Bellande F, Mao W, Ricoux R, Mahy JP. Neocarzinostatin-based hybrid biocatalysts with a RNase like activity. Bioorg Med Chem 2014; 22:5678-86. [PMID: 24984934 DOI: 10.1016/j.bmc.2014.05.063] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2014] [Revised: 05/24/2014] [Accepted: 05/28/2014] [Indexed: 11/16/2022]
Abstract
A new zinc(II)-cofactor coupled to a testosterone anchor, zinc(II)-N,N-bis(2-pyridylmethyl)-1,3-diamino-propa-2-ol-N'(17'-succinimidyltestosterone) (Zn-Testo-BisPyPol) 1-Zn has been synthesized and fully characterized. It has been further associated with a neocarzinostatin variant, NCS-3.24, to generate a new artificial metalloenzyme following the so-called 'Trojan horse' strategy. This new 1-Zn-NCS-3.24 biocatalyst showed an interesting catalytic activity as it was found able to catalyze the hydrolysis of the RNA model HPNP with a good catalytic efficiency (kcat/KM=13.6M(-1)s(-1) at pH 7) that places it among the best artificial catalysts for this reaction. Molecular modeling studies showed that a synergy between the binding of the steroid moiety and that of the BisPyPol into the protein binding site can explain the experimental results, indicating a better affinity of 1-Zn for the NCS-3.24 variant than testosterone and testosterone-hemisuccinate themselves. They also show that the artificial cofactor entirely fills the cavity, the testosterone part of 1-Zn being bound to one the two subdomains of the protein providing with good complementarities whereas its metal ion remains widely exposed to the solvent which made it a valuable tool for the catalysis of hydrolysis reactions, such as that of HPNP. Some possible improvements in the 'Trojan horse' strategy for obtaining better catalysts of selective reactions will be further studied.
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Affiliation(s)
- Agathe Urvoas
- Institut de Biochimie et de Biophysique Moléculaire et Cellulaire, UMR 8619 CNRS, Laboratoire de Modélisation et d'Ingénierie des Protéines, Bât. 430, Université Paris XI, 91405 Orsay Cedex, France
| | - Wadih Ghattas
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, UMR 8182 CNRS, Laboratoire de Chimie Bioorganique et Bioinorganique, Bât. 420, Université Paris-sud, 91405 Orsay Cedex, France
| | - Jean-Didier Maréchal
- Departament de Química, Universitat Autònoma de Barcelona, Edifici C.n., Cerdonyola del Vallès, 08193 Barcelona, Spain
| | - Frédéric Avenier
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, UMR 8182 CNRS, Laboratoire de Chimie Bioorganique et Bioinorganique, Bât. 420, Université Paris-sud, 91405 Orsay Cedex, France
| | - Felix Bellande
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, UMR 8182 CNRS, Laboratoire de Chimie Bioorganique et Bioinorganique, Bât. 420, Université Paris-sud, 91405 Orsay Cedex, France
| | - Wei Mao
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, UMR 8182 CNRS, Laboratoire de Chimie Bioorganique et Bioinorganique, Bât. 420, Université Paris-sud, 91405 Orsay Cedex, France
| | - Rémy Ricoux
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, UMR 8182 CNRS, Laboratoire de Chimie Bioorganique et Bioinorganique, Bât. 420, Université Paris-sud, 91405 Orsay Cedex, France.
| | - Jean-Pierre Mahy
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, UMR 8182 CNRS, Laboratoire de Chimie Bioorganique et Bioinorganique, Bât. 420, Université Paris-sud, 91405 Orsay Cedex, France.
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21
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Lin Y, Wang J, Lu Y. Functional tuning and expanding of myoglobin by rational protein design. Sci China Chem 2014. [DOI: 10.1007/s11426-014-5063-5] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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22
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Brenner W, Malig J, Costa RD, Guldi DM, Jux N. Poly-ortho-functionalizable tetraarylporphycene platform-synthesis of octacationic derivatives towards the layer-by-layer design of versatile graphene oxide photoelectrodes. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2013; 25:2314-2249. [PMID: 23239015 DOI: 10.1002/adma.201203459] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/20/2012] [Revised: 10/23/2012] [Indexed: 06/01/2023]
Affiliation(s)
- Wolfgang Brenner
- Department of Chemistry & Pharmacy and Interdisciplinary Center for Molecular Materials, Friedrich-Alexander-Universitat, Erlangen-Nurnberg, 91054 Erlangen, Germany
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23
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Onoda A, Hayashi T. Complimenting a Metal Complex with Protein Environment toward a New Hybrid Biocatalyst. J SYN ORG CHEM JPN 2013. [DOI: 10.5059/yukigoseikyokaishi.71.452] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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24
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Abstract
Unsubstituted porphycene was prepared in 65% yield from 2,7,12,17-tetra-tert-butylporphycene. Taking into account the yield of the substrate, this represents more than a five-fold improvement compared to the methodology used to date. Enhanced availability of the parent porphycene may be exploited in synthetic procedures based on derivatization of the unsubstituted compound.
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Affiliation(s)
- Natalia Urbańska
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, Warsaw, 01-224, Poland
| | - Marek Pietraszkiewicz
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, Warsaw, 01-224, Poland
| | - Jacek Waluk
- Institute of Physical Chemistry, Polish Academy of Sciences, Kasprzaka 44/52, Warsaw, 01-224, Poland
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25
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Takashima H, Kitano M, Hirai C, Murakami H, Tsukahara K. Photophysical and DNA-binding properties of cytochrome c modified with a platinum(II) complex. J Phys Chem B 2011; 114:13889-96. [PMID: 20936831 DOI: 10.1021/jp106121n] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Cytochrome c (cyt c) derivatives modified with a platinum(II) complex at the lysine residue, cyt c(III)-[Pt(bpy)(dapap)](1) {bpy = 2,2'-bipyridine, and dapap = 3-(2,3-diaminopropionylamino)propionic acid}, have been prepared. The modified residues are Lys8, Lys13, Lys55, Lys60, Lys73, and Lys88. In the case of the cyt c(III)-[Pt(bpy)(dapap)](1) dyad, the photoexcited singlet state of (1)([Pt(bpy)(dapap)](1))* was quenched by the heme Fe(III) moiety through the intramolecular photoinduced energy-transfer reaction via a through-space mechanism. Next, in the presence of calf thymus (CT)-DNA, the DNA-responsive fluorescence properties of cyt c(III)-[Pt(bpy)(dapap)](1) isomers were investigated. The order of the obtained binding constants between the cyt c(III)-[Pt(bpy)(dapap)](1) isomer and CT-DNA in an aqueous solution suggested that the electrostatic interaction is one of the important factors to stabilize the cyt c-DNA complex. Finally, we discussed the rotational motion of the [Pt(bpy)(dapap)](2+) moiety at the surface of cyt c by fluorescence anisotropy measurement. The increase in the anisotropy parameter, r, for each cyt c isomer clearly revealed that the noncovalent recognition of the [Pt(bpy)(dapap)](2+) moiety by CT-DNA is an essential event in the formation of the cyt c-DNA complex and generation of DNA-sensitive fluorescence signals.
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Affiliation(s)
- Hiroshi Takashima
- Department of Chemistry, Faculty of Science, Nara Women's University, Nara, 630-8506 Japan.
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26
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Bröring M, Brégier F, Burghaus O, Kleeberg C. A Biomimetic Copper Corrole - Preparation, Characterization, and Reconstitution with Horse Heart Apomyoglobin. Z Anorg Allg Chem 2010. [DOI: 10.1002/zaac.201000102] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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27
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Abstract
Photoactivatable myoglobin containing a DNA oligonucleotide as a structural anchor was designed by using the reconstitution of artificial heme moieties containing Ru(3+) ions. This semisynthetic DNA-enzyme conjugate was successfully used for the oxidation of peroxidase substrates by using visible light instead of H(2)O(2) for the activation. The DNA anchor was utilized for the immobilization of the enzyme on the surface of magnetic microbeads. Enzyme activity measurements not only indicated undisturbed biofunctionality of the tethered DNA but also enabled magnetic separation-based enrichment and recycling of the photoactivatable biocatalyst.
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Affiliation(s)
- Chi-Hsien Kuo
- Technische Universität Dortmund, Fakultät Chemie, Biologisch-Chemische Mikrostrukturtechnik, Otto-Hahn Str. 6, 44227 Dortmund, Germany
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28
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Cuesta L, Karnas E, Lynch VM, Chen P, Shen J, Kadish KM, Ohkubo K, Fukuzumi S, Sessler JL. Metalloporphycenes: Synthesis and Characterization of (Pentamethylcyclopentadienyl)ruthenium Sitting-Atop and π-Complexes. J Am Chem Soc 2009; 131:13538-47. [DOI: 10.1021/ja905284d] [Citation(s) in RCA: 58] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Luciano Cuesta
- Department of Chemistry & Biochemistry, University Station-A5300, The University of Texas, Austin, Texas 78712-0165, Department of Chemistry, University of Houston, Houston, Texas 77204-5003, and Department of Material and Life Science, Graduate School of Engineering, Osaka University, SORST, Japan Science and Technology Agency (JST), Suita, Osaka 565-0871, Japan
| | - Elizabeth Karnas
- Department of Chemistry & Biochemistry, University Station-A5300, The University of Texas, Austin, Texas 78712-0165, Department of Chemistry, University of Houston, Houston, Texas 77204-5003, and Department of Material and Life Science, Graduate School of Engineering, Osaka University, SORST, Japan Science and Technology Agency (JST), Suita, Osaka 565-0871, Japan
| | - Vincent M. Lynch
- Department of Chemistry & Biochemistry, University Station-A5300, The University of Texas, Austin, Texas 78712-0165, Department of Chemistry, University of Houston, Houston, Texas 77204-5003, and Department of Material and Life Science, Graduate School of Engineering, Osaka University, SORST, Japan Science and Technology Agency (JST), Suita, Osaka 565-0871, Japan
| | - Ping Chen
- Department of Chemistry & Biochemistry, University Station-A5300, The University of Texas, Austin, Texas 78712-0165, Department of Chemistry, University of Houston, Houston, Texas 77204-5003, and Department of Material and Life Science, Graduate School of Engineering, Osaka University, SORST, Japan Science and Technology Agency (JST), Suita, Osaka 565-0871, Japan
| | - Jing Shen
- Department of Chemistry & Biochemistry, University Station-A5300, The University of Texas, Austin, Texas 78712-0165, Department of Chemistry, University of Houston, Houston, Texas 77204-5003, and Department of Material and Life Science, Graduate School of Engineering, Osaka University, SORST, Japan Science and Technology Agency (JST), Suita, Osaka 565-0871, Japan
| | - Karl M. Kadish
- Department of Chemistry & Biochemistry, University Station-A5300, The University of Texas, Austin, Texas 78712-0165, Department of Chemistry, University of Houston, Houston, Texas 77204-5003, and Department of Material and Life Science, Graduate School of Engineering, Osaka University, SORST, Japan Science and Technology Agency (JST), Suita, Osaka 565-0871, Japan
| | - Kei Ohkubo
- Department of Chemistry & Biochemistry, University Station-A5300, The University of Texas, Austin, Texas 78712-0165, Department of Chemistry, University of Houston, Houston, Texas 77204-5003, and Department of Material and Life Science, Graduate School of Engineering, Osaka University, SORST, Japan Science and Technology Agency (JST), Suita, Osaka 565-0871, Japan
| | - Shunichi Fukuzumi
- Department of Chemistry & Biochemistry, University Station-A5300, The University of Texas, Austin, Texas 78712-0165, Department of Chemistry, University of Houston, Houston, Texas 77204-5003, and Department of Material and Life Science, Graduate School of Engineering, Osaka University, SORST, Japan Science and Technology Agency (JST), Suita, Osaka 565-0871, Japan
| | - Jonathan L. Sessler
- Department of Chemistry & Biochemistry, University Station-A5300, The University of Texas, Austin, Texas 78712-0165, Department of Chemistry, University of Houston, Houston, Texas 77204-5003, and Department of Material and Life Science, Graduate School of Engineering, Osaka University, SORST, Japan Science and Technology Agency (JST), Suita, Osaka 565-0871, Japan
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29
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Takashima H, Kawahara H, Kitano M, Shibata S, Murakami H, Tsukahara K. Metal ion-dependent fluorescent dynamics of photoexcited zinc-porphyrin and zinc-myoglobin modified with ethylenediaminetetraacetic acid. J Phys Chem B 2009; 112:15493-502. [PMID: 18991435 DOI: 10.1021/jp807692w] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
The reconstituted zinc-myoglobin (ZnMb) dyads, ZnMb-[M(II)(edta)], have been prepared by incorporating a zinc-porphyrin (ZnP) cofactor modified with ethylenediaminetetraacetic acid (H(4)edta) into apo-Mb. In case of the monomeric ZnP(edta) cofactor coordinated by one pyridine molecule, ZnP(py)(edta), a spontaneous 1:1 complex with a transient metal ion was formed in an aqueous solvent, and the photoexcited singlet state of ZnP, (1)(ZnP)*, was quenched by the [Cu(II)(edta)] moiety through intramolecular photoinduced electron-transfer (ET) reaction. The rate constant for the intramolecular quenching ET (k(q)) at 25 degrees C was successfully obtained as k(q) = 5.1 x 10(9) s(-1). In the case of Co(2+), Ni(2+), and Mn(2+), intersystem crossing by paramagnetic effect was mainly considered between (1)(ZnP)* and the [M(II)(edta)] complex. For the ZnMb-[M(II)(edta)] systems, the intramolecular ET reaction between the excited singlet state of (1)(ZnMb)* and the [Cu(II)(edta)] moieties provided the slower quenching rate constant, k(q) = 2.1 x 10(8) s(-1), compared with that of the ZnP(py)(edta) one. Kinetic studies also presented the efficient fluorescence quenching of the (1)(ZnMb)*-[Co(II)(edta)] dyad. Our study clearly demonstrates that wrapping of the ZnP cofactor by the apoprotein matrix and synthetic manipulation at the Mb surface ensure metal ion-sensitive fluorescent dynamics of ZnMb and provides valuable information to elucidate the complicated mechanism of the biological photoinduced ET reactions of hemoproteins.
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Affiliation(s)
- Hiroshi Takashima
- Department of Chemistry, Faculty of Science, Nara Women's University, Nara, 630-8506 Japan.
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30
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Bröring M, Brégier F, Krüger R, Kleeberg C. Functional Porphyrinoids from a Biomimetically Decorated Bipyrrole. Eur J Inorg Chem 2008. [DOI: 10.1002/ejic.200800946] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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31
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Matsuo T, Ito K, Nakashima Y, Hisaeda Y, Hayashi T. Effect of peripheral trifluoromethyl groups in artificial iron porphycene cofactor on ligand binding properties of myoglobin. J Inorg Biochem 2008; 102:166-73. [PMID: 17845820 DOI: 10.1016/j.jinorgbio.2007.07.032] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2007] [Revised: 06/30/2007] [Accepted: 07/27/2007] [Indexed: 11/18/2022]
Abstract
An iron porphycene, a structural isomer of iron porphyrin, with trifluoromethyl groups at the peripheral position of the framework was incorporated into sperm whale apomyoglobin. The prepared myoglobin shows the higher O(2) affinity than the native protein. However, the oxygen affinity of the reconstituted myoglobin is lower than that of the myoglobin having an iron porphycene without trifluoromethyl groups, which is mainly originated from the enhancement of the O(2) dissociation. The CO affinity of the myoglobin with the trifluoromethylated iron porphycene is similar to that observed for the reference protein having the iron porphycene without trifluoromethyl groups, although their C-O stretching frequencies are significantly different. The relationship between the electronic states of the porphycene ring and the ligand bindings is discussed.
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Affiliation(s)
- Takashi Matsuo
- Department of Applied Chemistry, Graduate School of Engineering, Osaka University, Suita, Osaka 565-0871, Japan
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32
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33
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Khoroshun DV, Musaev DG, Morokuma K. Electronic reorganization: Origin of sigma trans promotion effect. J Comput Chem 2006; 28:423-41. [PMID: 17143866 DOI: 10.1002/jcc.20551] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
Binding of two ligands trans to each other by some transition metal complexes may be cooperative [Khoroshun et al., Mol Phys 2002, 100, 523]. Several interesting consequent effects include (i) inverse relationship between bond strength and binding affinity; (ii) smaller coordination barriers to formation of weaker bonds; (iii) enhancement of Lewis acidity with increased number of ligands. We describe a simple model, sigma trans promotion effect (TPE), which considers electronic reorganization between two Lewis structures, and predicts the above-mentioned effects. The applied result of present study is the unified perspective on several facts of heme chemistry. Particularly, we reiterate an important but often overlooked notion, developed previously within the spin pairing model [Drago and Corden, Acc Chem Res 1980, 13, 353], that, in hemoproteins, the proximal histidine and the distal ligand such as O2 or CO cooperate in promoting electronic reorganization. As a result, depopulation of dz2 orbital upon ligand binding contributes to the phenomenon of hemoglobin cooperativity. The presented density functional (B3LYP) calculations on realistic models, the processes of carbon monoxide binding by Fe(II) porphyrins and dinitrogen binding by triamido/triamidoamine Mo(III) complexes, particularly the evaluation of the coordination barriers due to spin-state change by location of the minima on seams of crossing, support the TPE model predictions. From a broader theoretical perspective, the present study would hopefully stimulate the development of much needed frameworks and tools for facile comparisons of wave functions and their properties between different geometries, species, and electronic states. Advancement of practical wave function comparisons may yield fresh qualitative perspectives on chemical reactivity, and promote better understanding of related concepts such as electronic reorganization.
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Affiliation(s)
- Dmitry V Khoroshun
- Cherry L. Emerson Center for Scientific Computation, Emory University, 1515 Dickey Drive, Atlanta, Georgia 30322, USA
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