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Nakamura T, Yano S, Liu YF, Nabeshima T. Formation of a Metallomacrocycle Possessing Nitrogen Donors Assembled in the Cavity and Unique Water Clusters. Inorg Chem 2024; 63:12697-12702. [PMID: 38950409 DOI: 10.1021/acs.inorgchem.4c01542] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/03/2024]
Abstract
2,2'-Bipyridyl (bpy) is widely used as a chelating unit for metal complexation but is not usually considered as a hydrogen-bonding unit. This is because the metal-free bpy units are usually in a transoid conformation, and the two nitrogen lone pairs are pointed to the opposite sides. We now report a metallomacrocycle whose three metal-free bpy units are in a cisoid conformation and are fixed in the cavity. The complexation of nickel(II) only at the salen units of the triangular bpytrisalen ligand produced this rigid and planar macrocycle. Its cavity is surrounded by hydrogen-bond acceptors (N of bpy and O of salen), and it was found that unique pentagonal prism clusters of water molecules templated by the cavity were formed in the crystal. This study has not only increased the variation of the synthetic methodologies of multinuclear complexes but has also provided the structural platform on which multiple bpy units exert hydrogen-bonding functions.
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Affiliation(s)
- Takashi Nakamura
- Institute of Pure and Applied Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8571, Japan
| | - Syuhei Yano
- Graduate School of Pure and Applied Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8571, Japan
| | - Yi-Fu Liu
- Degree Programs in Pure and Applied Sciences, Graduate School of Science and Technology, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8571, Japan
| | - Tatsuya Nabeshima
- Institute of Pure and Applied Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki 305-8571, Japan
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2
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Richard S, Le Duc G, Le Poul N, Le Mest Y, Reinaud O, Rebilly JN. Chemoselective guest-triggered shaping of a polynuclear Cu II calix[6]complex into a molecular host. Dalton Trans 2017; 46:15249-15256. [PMID: 29067368 DOI: 10.1039/c7dt03375c] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A new calix[6]arene scaffold bearing a tris-imidazole binding site at the small rim and three tetradentate aza ligands at the large rim was synthesized. The system binds three CuII ions at the large rim sites and is unable to bind a fourth one, which remains in solution. The charge repulsion between the complexes, together with the flexibility of the scaffold, disorganizes the small rim site for binding and prevents its use for host-guest studies. Although the presence of MeCN or DMF guests does not alter this state, the addition of a heptylamine guest, which further displays Brønsted basicity, restores its receptor ability by stabilizing the extra CuII ion at the tris-imidazole site with concomitant guest encapsulation and binding of an exo hydroxo ligand. This chemoselective nuclearity switch yields a tetranuclear complex in which the guest backbone is preorganized in front of three potentially reactive Cu(ii) complexes, reminiscent of polynuclear CuII enzyme active sites.
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Affiliation(s)
- Sarah Richard
- CNRS UMR 8601, Laboratoire de Chimie et de Biochimie pharmacologiques et toxicologiques, Université Paris Descartes, Sorbonne Paris Cité, 75006 Paris, France
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Rémy C, Guyon H, Rebilly JN, Leray I, Reinaud O. Selective Fluorimetric Detection of Primary Alkylamines by a Calix[6]arene Funnel Complex. Chemistry 2017; 23:8669-8677. [DOI: 10.1002/chem.201700640] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2017] [Indexed: 12/23/2022]
Affiliation(s)
- Charlotte Rémy
- PPSM, ENS Cachan, CNRS; Université Paris Saclay; 161 avenue du Président Wilson 94235 Cachan Cedex France
| | - Hélène Guyon
- CNRS UMR 8601, Laboratoire de Chimie et de Biochimie pharmacologiques et toxicologiques; Université Paris Descartes, Sorbonne Paris Cité; 45 rue des Saints Pères 75006 Paris France
| | - Jean-Noël Rebilly
- CNRS UMR 8601, Laboratoire de Chimie et de Biochimie pharmacologiques et toxicologiques; Université Paris Descartes, Sorbonne Paris Cité; 45 rue des Saints Pères 75006 Paris France
| | - Isabelle Leray
- PPSM, ENS Cachan, CNRS; Université Paris Saclay; 161 avenue du Président Wilson 94235 Cachan Cedex France
| | - Olivia Reinaud
- CNRS UMR 8601, Laboratoire de Chimie et de Biochimie pharmacologiques et toxicologiques; Université Paris Descartes, Sorbonne Paris Cité; 45 rue des Saints Pères 75006 Paris France
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Ségaud N, De Thomasson C, Daverat C, Sénéchal-David K, Dos Santos A, Steinmetz V, Maître P, Rebilly JN, Banse F, Reinaud O. Mimicking the Regulation Step of Fe-Monooxygenases: Allosteric Modulation of Fe IV -Oxo Formation by Guest Binding in a Dinuclear Zn II -Fe II Calix[6]arene-Based Funnel Complex. Chemistry 2017; 23:2894-2906. [PMID: 28128474 DOI: 10.1002/chem.201605248] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2016] [Indexed: 11/10/2022]
Abstract
A heteroditopic ligand associated with a calix[6]arene scaffold bearing a tris(imidazole) coordinating site at its small rim and an amine/pyridine ligand at its large rim has been prepared, and its regioselective coordination to ZnII at the small rim and FeII in the amine/pyridine ligand has been achieved. The heterodinuclear complex obtained displays an overall cone conformation capped by the tris(imidazole)ZnII moiety and bears a non-heme FeII complex at its base. Each of the metal centers exhibits one labile position, allowing the coordination inside the cavity of a guest alkylamine at ZnII and the generation of reaction intermediates (FeIII (OOH) and FeIV O) at the large rim. A dependence between the chain length of the encapsulated alkylamine and the distribution of FeIII (OOH) intermediates and FeIII (OMe) is observed. In addition, it is shown that the generation of the FeIV O intermediate is enhanced by addition of the alkylamine guest. Hence, this supramolecular system gathers the three levels of reactivity control encountered in oxidoreductases: i) control of the FeII redox properties through its first coordination sphere, allowing us to generate high valent reactive species; ii) control of guest binding through a hydrophobic funnel that drives its alkyl chain next to the reactive iron complex, thus mimicking the binding pocket of natural systems; iii) guest-modulated reactivity of the FeII center towards oxidants.
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Affiliation(s)
- Nathalie Ségaud
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, Laboratoire de Chimie Inorganique, Université Paris Sud, Université Paris Saclay, CNRS, 91405, Orsay, France
| | - Constance De Thomasson
- CNRS UMR 8601, Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques, Université Paris Descartes, Sorbonne Paris Cité, 75006, Paris, France
| | - Caroline Daverat
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, Laboratoire de Chimie Inorganique, Université Paris Sud, Université Paris Saclay, CNRS, 91405, Orsay, France.,CNRS UMR 8601, Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques, Université Paris Descartes, Sorbonne Paris Cité, 75006, Paris, France
| | - Katell Sénéchal-David
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, Laboratoire de Chimie Inorganique, Université Paris Sud, Université Paris Saclay, CNRS, 91405, Orsay, France
| | - Amandine Dos Santos
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, Laboratoire de Chimie Inorganique, Université Paris Sud, Université Paris Saclay, CNRS, 91405, Orsay, France
| | - Vincent Steinmetz
- Laboratoire de Chimie Physique, CNRS UMR 8000, Université Paris Sud, Université Paris Saclay, CNRS, 91405, Orsay, France
| | - Philippe Maître
- Laboratoire de Chimie Physique, CNRS UMR 8000, Université Paris Sud, Université Paris Saclay, CNRS, 91405, Orsay, France
| | - Jean-Noël Rebilly
- CNRS UMR 8601, Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques, Université Paris Descartes, Sorbonne Paris Cité, 75006, Paris, France
| | - Frédéric Banse
- Institut de Chimie Moléculaire et des Matériaux d'Orsay, Laboratoire de Chimie Inorganique, Université Paris Sud, Université Paris Saclay, CNRS, 91405, Orsay, France
| | - Olivia Reinaud
- CNRS UMR 8601, Laboratoire de Chimie et de Biochimie Pharmacologiques et Toxicologiques, Université Paris Descartes, Sorbonne Paris Cité, 75006, Paris, France
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Rebilly JN, Colasson B, Bistri O, Over D, Reinaud O. Biomimetic cavity-based metal complexes. Chem Soc Rev 2015; 44:467-89. [DOI: 10.1039/c4cs00211c] [Citation(s) in RCA: 137] [Impact Index Per Article: 15.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
The biomimetic association of a metal ion with a cavity allows selective recognition, unusual redox properties and new reactivity patterns.
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Affiliation(s)
- Jean-Noël Rebilly
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques
- UMR CNRS 8601
- Université Paris Descartes
- Sorbonne Paris Cité
- 75006 Paris
| | - Benoit Colasson
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques
- UMR CNRS 8601
- Université Paris Descartes
- Sorbonne Paris Cité
- 75006 Paris
| | - Olivia Bistri
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques
- UMR CNRS 8601
- Université Paris Descartes
- Sorbonne Paris Cité
- 75006 Paris
| | - Diana Over
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques
- UMR CNRS 8601
- Université Paris Descartes
- Sorbonne Paris Cité
- 75006 Paris
| | - Olivia Reinaud
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques
- UMR CNRS 8601
- Université Paris Descartes
- Sorbonne Paris Cité
- 75006 Paris
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6
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Rebilly JN, Hessani A, Colasson B, Reinaud O. A versatile strategy for appending a single functional group to a multifunctional host through host-guest covalent-capture. Org Biomol Chem 2014; 12:7780-5. [PMID: 25156383 DOI: 10.1039/c4ob01429d] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Mono-functionalization of a molecular host is a key step for the development of various efficient systems ranging from supramolecular fluorescent probes to supramolecular catalysts. The presence of several identical reactive groups on the host makes its selective mono-functionalization a challenge. We propose a general two-step strategy to achieve this, based on the receptor properties of the host. A guest bearing two orthogonal functions is first reacted with the host presenting itself a reactive function that is complementary to one of those of the guest. As a result, the host is selectively mono-functionalized by the covalent capture of the guest, which inhibits further reaction of the host. The second function that was present on the guest and which is now covalently linked to the host can be activated in the second step for the grafting of various objects. As a proof of concept, the strategy is described on a calix[6]arene scaffold presenting three identical reactive units. Using Huisgen thermal azide-alkyne cycloaddition for the host-guest covalent-capture step, three examples of post-functionalization are described, allowing cavities bearing a single redox tag, fluorescent probe or polydentate ligand through esterification, Schiff base formation or nucleophilic substitution to be obtained.
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Affiliation(s)
- Jean-Noël Rebilly
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, CNRS UMR 8601, PRES Sorbonne Paris Cité, Université Paris Descartes, 45 rue des Saints Pères, 75006 Paris, France.
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7
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Zhang X, Zhao H, Tian D, Deng H, Li H. A Photoresponsive Wettability Switch Based on a Dimethylamino Calix[4]arene. Chemistry 2014; 20:9367-71. [DOI: 10.1002/chem.201402476] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2014] [Indexed: 01/27/2023]
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Affiliation(s)
- Jean-Noël Rebilly
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, CNRS UMR 8601, PRES Sorbonne Paris Cité, Université Paris Descartes, 45 rue des Saints Pères, 75006 Paris, France
| | - Olivia Reinaud
- Laboratoire de Chimie et Biochimie Pharmacologiques et Toxicologiques, CNRS UMR 8601, PRES Sorbonne Paris Cité, Université Paris Descartes, 45 rue des Saints Pères, 75006 Paris, France
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10
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Bernier N, Menard N, Colasson B, Rebilly JN, Reinaud O. Guest-Triggered ZnII Translocation and Supramolecular Nuclearity Control in Calix[6]arene-Based Complexes. Inorg Chem 2013; 52:4683-91. [DOI: 10.1021/ic4002863] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Nicolas Bernier
- Laboratoire de Chimie et Biochimie Pharmacologiques
et Toxicologiques, CNRS UMR 8601, PRES Sorbonne Paris Cité, Université Paris Descartes, 45 rue des Saints
Pères, 75006 Paris, France
| | - Nicolas Menard
- Laboratoire de Chimie et Biochimie Pharmacologiques
et Toxicologiques, CNRS UMR 8601, PRES Sorbonne Paris Cité, Université Paris Descartes, 45 rue des Saints
Pères, 75006 Paris, France
| | - Benoit Colasson
- Laboratoire de Chimie et Biochimie Pharmacologiques
et Toxicologiques, CNRS UMR 8601, PRES Sorbonne Paris Cité, Université Paris Descartes, 45 rue des Saints
Pères, 75006 Paris, France
| | - Jean-Noël Rebilly
- Laboratoire de Chimie et Biochimie Pharmacologiques
et Toxicologiques, CNRS UMR 8601, PRES Sorbonne Paris Cité, Université Paris Descartes, 45 rue des Saints
Pères, 75006 Paris, France
| | - Olivia Reinaud
- Laboratoire de Chimie et Biochimie Pharmacologiques
et Toxicologiques, CNRS UMR 8601, PRES Sorbonne Paris Cité, Université Paris Descartes, 45 rue des Saints
Pères, 75006 Paris, France
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Gramage-Doria R, Armspach D, Matt D. Metallated cavitands (calixarenes, resorcinarenes, cyclodextrins) with internal coordination sites. Coord Chem Rev 2013. [DOI: 10.1016/j.ccr.2012.10.006] [Citation(s) in RCA: 110] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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12
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Guillaume P, Florence DC, Alain M. Tris-ACE-α-cyclodextrin tripods: chemistry and metal coordination behaviour. Dalton Trans 2013; 42:16806-17. [DOI: 10.1039/c3dt51811f] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Jia Y, Li H, Zhao B, Guo Q, Hou H, Fan Y. The Syntheses, Crystal Structure, and Exceptional Chemical Stability of Three Multinuclear PbIIComplexes. Eur J Inorg Chem 2012. [DOI: 10.1002/ejic.201201092] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
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