Novel reversible Zn2+-assisted biological phosphate "turn-on" probing through stable aryl-hydrazone salicylaldimine conjugation that attenuates ligand hydrolysis

Functionalization of BODIPY Dyes with Additional C-N Double Bonds and Their Applications

BODIPY (4-bora-3a,4a-diaza-s-indacene) dyes are regarded as highly useful compounds due to their rich photophysical properties, stability, and ease of functionalization. In recent years, hot topics studied with this class of compounds are targeted photodynamic therapy, photothermal therapy, fluorescent bioimaging agents, structural modification of the BODIPY core, synthesis of BODIPY analogs, and BODIPY-based supramolecular constructs. This review covers the advances in BODIPY structures substituted with additional carbon-nitrogen double bonds, namely imines, hydrazones, oximes, and related derivatives for various applications. Works based on fluorescent indicators of anions, cations, and neutral molecules are included in this review. In addition, the use of such structures for pharmaceutical applications, photodynamic therapy, fluorescent switches, and fluorescent building blocks are also investigated. In addition to covering the major literature within the mentioned subclass, design principles, working mechanisms, and outlooks are also provided to enlighten forthcoming promising efforts. With this work, we aim to provide insights about the synthesis, photophysical properties, contribution of C=N bonds to a class of dye, and possible areas of use and stimulate researchers to present new ideas and overcome the current problems using these derivatives.

Benzil Bis-Hydrazone Based Fluorescence 'Turn-on' Sensor for Highly Sensitive and Selective Detection of Zn(II) Ions

In this study, a novel Benzil Bis-Hydrazone (BBH) sensor with two C = N-N = C moieties was designed and synthesized based on the condensation reaction between benzil-dihydrazone (b) and cinnamaldehyde. The BBH probe in dimethylsulfoxide showed extremely weak fluorescence. However, the same solution exhibited an intensive fluorescence enhancement (152-fold) with the introduction of Zn(II) ions. In contrast, no or negligible fluorescence changes were observed when other ions were added. The fluorogenic behavior of BBH towards the examined cations indicated an excellent selectivity of the BBH sensor for Zn(II) cations without any interference from other cations like Fe(II), Mg(II), Cu(II), Co(II), Mn(II), Cr(III), Hg(II), Sn(II), Al(I), La(III), Ca(II), Ba(II), Na(I), K(I), and especially Cd(II). Moreover, the UV-vis spectrophotometric titrations revealed that a 1:1 stoichiometric complex BBH-Zn(II) was formed during the Zn(II) sensing and the binding constant value for this complex was calculated to be equal to 106.8. Further, in order to show the affinity of the BBH sensor for Zn(II) cations, it was deemed necessary to determine the limit of detection (LOD) which was found to equal to 2.5 10-4 M.

Caging of Bodipy Photosensitizers through Hydrazone Bond Formation and their Activation Dynamics

Three unique hydrazone-based small-molecule-activatable photosensitizers were designed and synthesized. Two of them work efficiently in a low-pH environment, resembling the microenvironment of the cancerous tissues. The activation pathway is unique and based on hydrazone bond cleavage. They were investigated through in vitro cellular studies in aggressive cancer lines, and tumor-specific culture conditions successfully initiated the cleavage and activation of the cytotoxic singlet oxygen generation in the relevant time period. The interesting photophysical characteristics of the α- and β-substituted hydrazone derivatives of the Bodipy structures and their mild hydrolysis methodologies were also investigated successfully.

A bisphenol based fluorescence chemosensor for the selective detection of Zn2+ and PPi ions and its bioluminescence imaging

A bisphenol based fluorescence "turn-on" chemosensor 4,4'-(propane-2,2-diyl)bis(2-((E)-(2-(benzo[d]thiazol-2-yl)hydrazineyldene)methyl)phenol) (BHMP) has been synthesized and its sensing behavior was tested towards various ionic species. The chemo-sensing behavior of BHMP has been established through absorption, fluorescence, NMR, and mass spectroscopic techniques. The probe BHMP selectively detects zinc ions over other metal ions and the resulting BHMP + Zn²⁺ ensemble serves as a secondary probe for the detection of pyrophosphate (PPi) anion specifically over other anions. The spectroscopic studies reveal the fluorescence enhancement of BHMP in association with Zn²⁺ ions was quenched in the presence of pyrophosphate (PPi) anions. A probable mechanism of this selective sensing behavior was described on the basis of "OFF-ON-OFF" strategy for detection of both cations and anions. Moreover, the biological applicability of the chemosensor BHMP was examined via cell imaging studies.

Hydrazide-Hydrazone Small Molecules as AIEgens: Illuminating Mitochondria in Cancer Cells

Aggregation-induced-emission luminogens (AIEgens) have gained considerable attention as interesting tools for several biomedical applications, especially for bioimaging due to their brightness and photostability. Numerous AIEgens have been developed for lighting up the subcellular organelles to understand their forms and functions not only healthy but also unhealthy states, such as in cancer cells. However, there is lack of easily synthesizable, biocompatible small molecules for illuminating mitochondria (powerhouses) inside cells. To address this issue, an easy and short synthesis of new biocompatible hydrazide-hydrazone-based small molecules with remarkable aggregation-induced emission (AIE) properties is described. These small-molecule AIEgens showed hitherto unobserved AIE properties due to dual intramolecular H-bonding confirmed by theoretical calculation, pH- and temperature-dependent fluorescence and X-ray crystallographic studies. Confocal microscopy showed that these AIEgens were internalized into the HeLa cervical cancer cells without showing any cytotoxicity. One of the AIEgens was tagged with a triphenylphosphine (TPP) moiety, which successfully localized in the mitochondria of HeLa cells in a selective way compared to L929 noncancerous fibroblast cells. These unique hydrazide-hydrazone-based biocompatible AIEgens can serve as powerful tools to illuminate multiple subcellular organelles to elucidate their forms and functions in cancer cells for next-generation biomedical applications.

Naphthoylhydrazones: coordination to metal ions and biological screening

V^IVO, Cu^II and Zn^II complexes from three new naphthoylhydrazones were screened towards their ability to bind albumin and their cytotoxicity.

Molecular Receptors for Recognition and Sensing of Nucleotides

Nucleotides are constituents of nucleic acids and they have a variety of functions in cellular metabolism. Synthetic receptors and sensors are required to reveal the role of nucleotides in living organisms and mechanisms of signal transduction events. In recent years, a large number of nucleotide-selective synthetic receptors have been devised, which utilize different molecular designs and sensing mechanisms. This Minireview presents recent progress in the design of synthetic molecular receptors for selective recognition of nucleotides in aqueous solution. The binding properties of receptors and the origins of their selectivity for a particular nucleotide are discussed.

Time dependent aggregation induced emission enhancement and the study of molecular packing in closely related azo-phenol BODIPY species

Fluorescent azo-phenol BODIPYs (1-3) have been obtained by the substituent (-OCH₃/-CH₃) directed synthesis of ortho (L1) and para (L2-L3) azo-phenol aldehydes. These display aggregation caused quenching (ACQ, 1) and aggregation induced emission enhancement (AIEE, 2 and 3) depending on the position of azo relative to the phenolic hydroxyl group. An intriguing time dependent morphological transition from nanospheres to ordered nanorods and subsequent emission changes in AIEE active azo-phenol BODIPYs have been successfully realized by time dependent fluorescence, scanning electron (SEM), transmission electron (TEM) and fluorescence optical microscopy (FOM) studies. The existence of one-dimensional (1D) nanorods as ultimate species in these compounds (2-3) has been supported by crystal packing patterns. Diverse aggregated forms and hierarchical nanostructures have been related to variable extents of fluorescence enhancement. The plausible charge transfer process and its role in AIEE have been supported by DFT studies.

Selective detection of pyrophosphate anion by a simple Cd(II) based terpyridine complex

A simple ratiometric terpyridine-Cd(ll) complex was synthesized by the treatment of CdCl₂ with terpyridine ligand 4'-(4-N,N'-dimethylaminophenyl)-2,2':6',2″-terpyridine. The synthesized complex was found to act as a selective fluorescent chemosensor for pyrophosphate P₂O₇^4- (PPi) over other anions like F^-, Cl^-, Br^-, CO₃^2-, SO₃^2-, AcO^-, NO₂^-, and H₂PO₄^-. Furthermore, the receptor probe was also successfully employed in HeLa cell for PPi detection, which indicates this can be used as a chemosensor for cells.

A novel glucosamine-linked fluorescent chemosensor for the detection of pyrophosphate in an aqueous medium and live cells

A glucosamine-linked Cu²⁺ ensemble has been successfully developed for detection of pyrophosphate (PPi) in aqueous medium and in live MD-AMB-231 cells.

A hydrazone based probe for selective sensing of Al(iii) and Al(iii)-probe complex mediated secondary sensing of PPi: framing of molecular logic circuit and memory device and computational studies

A hydrazone-based conjugate acts as a dual channel sensor towards Al³⁺and PPi in H₂O–MeOH with excellent sensing capability in live cells.

A hexa-quinoline basedC3-symmetric chemosensor for dual sensing of zinc(ii) and PPi in an aqueous mediumviachelation induced “OFF–ON–OFF” emission

“OFF–ON–OFF” luminescence switching behavior of a hexa-quinoline based sensor towards Zn²⁺and PPi in an aqueous buffer medium is demonstrated.

Combined experimental and theoretical studies on selective sensing of zinc and pyrophosphate ions by rational design of compartmental chemosensor probe: Dual sensing behaviour via secondary recognition approach and cell imaging studies

A compartmental chemosensor probe HL was designed and synthesized for dual sensing of zinc ions and PPi via secondary recognition approach.

Selective detection of inorganic phosphates in live cells based on a responsive fluorescence probe

A new activatable fluorescence probe has been designed and synthesized for inorganic phosphate detection in buffer and live cells.

Selective Sensing of Phosphates by a New Bis-heteroleptic RuII Complex through Halogen Bonding: A Superior Sensor over Its Hydrogen-Bonding Analogue

The selective phosphate-sensing property of a bis-heteroleptic Ru^II complex, 1[PF₆ ]₂ , which has a halogen-bonding iodotriazole unit, is demonstrated and is shown to be superior to its hydrogen-bonding analogue, 2[PF₆ ]₂ . Complex 1[PF₆ ]₂ , exploiting halogen-bonding interactions, shows enhanced phosphate recognition in both acetonitrile and aqueous acetonitrile compared with its hydrogen-bonding analogue, owing to considerable amplification of the Ru^II -center-based metal-to-ligand charge transfer (MLCT) emission response and luminescence lifetime. Detailed solution-state studies reveal a higher association constant, lower limit of detection, and greater change in lifetime for complex 1 in the presence of phosphates compared with its hydrogen-bonding analogue, complex 2. The ¹ H NMR titration study with H₂ PO₄^- ascertains that the binding of H₂ PO₄^- occurs exclusively through halogen-bonding or hydrogen-bonding interactions in complexes 1[PF₆ ]₂ and 2[PF₆ ]₂ , respectively. Importantly, the single-crystal X-ray structure confirms the first ever report on metal-assisted second-sphere recognition of H₂ PO₄^- and H₂ P₂ O₇^2- with 1 through a solitary C-I⋅⋅⋅anion halogen-bonding interaction.

Crystal structures of (E)-2-((2-((pyridin-2-yl)hydrazonyl)methyl)phenolic compounds: different sets of classical hydrogen bonds, X–H···Y (X, Y = O, N)

Structures are reported of (E)-((2-((pyridin-2-yl)hydrazonyl)methyl)arene compounds, 2-aryl-CH=N–CH)-pyridine, 8, namely (aryl=2,4-(HO)2C6H3, 8a; 2,5-(HO)2C6H3, 8b, 2–HOC6H4, 8c, as the hemihydrate, [(8c) 2· (H 2 O )], 2–HO–5–O2NC6H3, 8d; and 2,6-(MeO)2C6H3, 8e. Intramolecular O1–H1··· N2(hydrazonyl) hydrogen bonds are consistantly found in each of the hydroxy compounds, 8a–8d. However, a diverse array of classical intermolecular hydrogen bonds, X–H···Y (X or Y = O or N) are found in 8a–8e. Classical intermolecular hydrogen bonds in 8a are chain forming N3–HN3···O1 and O2–H2···N1(pyridinyl) intermolecular hydrogen bonds, while in the isomer, 8b, dimer forming N3–HN3···N1(pyridinyl) and chain forming O2–H2···O1(pyridinyl) hydrogen bonds are present. The hydrate molecule in [(8c) 2 ·(H 2 O)] is involved in Ow–Hw···N1 intermolecular hydrogen bonding: also present in [(8c) 2 ·(H 2 O)] are chain forming N3–HN3···O2 bonds. The only intermolecular classical hydrogen bonds present in 8d and 8e, are the dimer forming N3–HN3···N1(pyridinyl) bonds. Thus only compounds, 8b, 8d and 8e, exhibit dimer forming N3–HN3···N1(pyridinyl) hydrogen bonds, previously reported fora range of (aryl-CH=N–CH)-pyridine derivatives. The occurence of N3–HN3···N1(pyridinyl) hydrogen bonds in many (aryl-CH=N–CH)-pyridine derivatives demonstrates the importance of such hydrogen bonds. However, as found in 8a and [(8c) 2 ·( H 2 O )], suitable sited donor substituents or the presence of solvate molecules can result in other classical hydrogen bonds being preferred.

A Simple and Selective Fluorescent Sensor for Zn(2+) and H(+) Ions in Aqueous Solution with OR Logic Gate Function

The synthesis and properties of a new compound, viz., (N,N'-[1,10-phenanthroline-4,7-diyldi((E)methylylidene)]bis(1,10-phenanthrolin-5-amine) (1), is described. Compound 1 can be used as a selective fluorescent Zn(2+) sensor in buffered solution. Furthermore, 1 induces turn on fluorogenic response to H(+) ions. Finally, it is shown that an OR logic gate can be constructed with 1 by using Zn(2+) and H(+) as two-inputs. Graphical Abstract In this paper, the design, synthesis and physicochemical properties of a new compound 1 based on 1,10-phenanthroline scaffold, is reported. It is noted that 1 can be used as a selective fluorescent Zn(2+) sensor in 0.01 M HEPES buffer containing DMF (2 % v/v, pH = 7.4) at room temperature. Furthermore, the spectrophotometric results suggest that compound 1 can be used as a pH reporter in highly acidic conditions (pH < 5). Finally, it was also shown that an OR logic gate can be constructed with 1 by using Zn(2+) and H(+) as two-inputs.

A Cyanuric Acid Platform Based Tripodal Bis-heteroleptic Ru(II) Complex of Click Generated Ligand for Selective Sensing of Phosphates via C-H···Anion Interaction

A new bis-heteroleptic trinuclear Ru(II) complex (1[PF6]6) has been synthesized from electron deficient cyanuric acid platform based copper-catalyzed azide-alkyne cycloaddition, i.e., CuAAC click generated ligand, 1,3,5-tris [(2-aminoethyl-1H-1,2,3-triazol-4-yl)-pyridine]-1,3,5-triazinane-2,4,6-trione (L1). Complex 1[PF6]6 displays weak luminescence (ϕf = 0.002) at room temperature with a short lifetime of ∼5 ns in acetonitrile. It shows selective sensing of hydrogen pyrophosphate (HP2O7(3-)) through 20-fold enhanced emission intensity (ϕf = 0.039) with a 15 nm red shift in emission maxima even in the presence of a large excess of various competitive anions like F(-), Cl(-), AcO(-), BzO(-), NO3(-), HCO3(-), HSO4(-), HO(-), and H2PO4(-) in acetonitrile. Selective change in the decay profile as well as in the lifetime of 1[PF6]6 in the presence of HP2O7(3-) (108 ns) further supports its selectivity toward HP2O7(3-). UV-vis and photoluminescence titration profiles and corresponding Job's plot analyses suggest 1:3 host-guest stoichiometric binding between 1[PF6]6 and HP2O7(3-). High emission enhancement of 1[PF6]6 in the presence of HP2O7(3-) has resulted in the detection limit of the anion being as low as 0.02 μM. However, 1[PF6]6 shows selectivity toward higher analogues of phosphates (e.g., ATP, ADP, and AMP) over HP2O7(3-)/H2PO4(-) in 10% Tris HCl buffer (10 mM)/acetonitrile medium. Downfield shifting of the triazole C-H in a (1)H NMR titration study confirms that the binding of HP2O7(3-)/H2PO4(-) is occurring via C-H···anion interaction. The single crystal X-ray structure of complex 1 having NO3(-) counteranion, 1[NO3]6 shows binding of NO3(-) with complex 1 via C-H···NO3(-) interactions.

Cd(II)-terpyridine-based complex as a ratiometric fluorescent probe for pyrophosphate detection in solution and as an imaging agent in living cells

The terpyridine anthracene ligand was synthesized and characterized. is a ratiometric fluorescent probe for Cd(2+) with a recognition mechanism based on intramolecular charge transfer (ICT). An complex was isolated, and its structure was established using single-crystal XRD. The complex was able to serve as a novel reversible chemosensing ensemble to allow ratiometric response to pyrophosphate (PPi) in aqueous media. Moreover, the fluorescence imaging in living cells from these two emission channels suggested that was a ratiometric probe for Cd(2+), and the in situ generated complex was also a ratiometric ensemble for PPi detection in living cells.

Tetraphenylethene-pyridine salts as the first self-assembling chemosensor for pyrophosphate

We presented a novel approach for pyrophosphate (PPi) sensing. Two tetraphenylethene (TPE)-functionalised pyridine salts (TPM and TPH) were designed and synthesized. Both of them exhibited weak emission in the solution state that originates from intramolecular charge transfer (ICT) from TPE to the pyridine; the addition of PPi into the TPM aqueous solution would enhance the fluorescence intensity, which eliminates the emission quenching effect of the iodide ion by the formation of PPi-sensor nanoparticles. The detection limit of TPM was determined to be as low as 133 nM. Meanwhile, a thin solid film of TPM that could detect PPi rapidly was conveniently prepared.

A fluorescent probe for estimation of adenosine diphosphate and monitoring of glucose metabolism

An ADP selective fluorescent probe working in aqueous medium was identified and the change in fluorescence as a function of ADP concentration was standardized. Using this probe, all the steps of glycolysis coupled with ATP/ADP inter-conversion and oxidative breakdown of pyruvate in the mitochondria were monitored and the consumption/production of ATP/ADP at each step was quantified. The quantity of ADP present in the mitochondria, taken from different body parts of a pig, was also determined. It is hypothesized that an appropriate modification of the technique may provide a diagnostic tool for monitoring biochemical pathways as well as for quick estimation of ADP in the mitochondria and other cell organelles.

meso-Salicylaldehyde substituted BODIPY as a chemodosimetric sensor for cyanide anions

meso-Salicylaldehyde substituted BODIPY 3 was synthesized by a simple method and used as a chemodosimetric sensor for CN⁻ anions.

A cyclization-induced emission enhancement (CIEE)-based ratiometric fluorogenic and chromogenic probe for the facile detection of a nerve agent simulant DCP

The first ratiometric fluorescent probe for the detection of a nerve agent simulant was developed based on tandem phosphorylation and intramolecular cyclization.

Detecting biologically relevant phosphates with locked salicylaldehyde probes in water

This communication describes a disassembly based approach for the detection of biologically relevant di- and tri-phosphates in water using locked fluorescent salicylaldehyde probes.

Fluorescent and colorimetric chemosensors for pyrophosphate

In this review, we will cover the fluorescent and colorimetric chemosensors developed for the detection of pyrophosphate (PPi) since 2010.

An imidazo-phenanthroline scaffold enables both chromogenic Fe(ii) and fluorogenic Zn(ii) detection

A promising dual channel responsive probe, which can simultaneously induce chromogenic and fluorogenic responses to Fe(ii) and Zn(ii) ions, respectively, is described.

Interaction of a dinuclear fluorescent Cd(ii) complex of calix[4]arene conjugate with phosphates and its applicability in cell imaging

A structurally characterized dinuclear fluorescent Cd(ii) complex of calix[4]arene exhibits selective quenching only in the presence of phosphates among the twenty anions studied, and the quenching is highest in the case of H₂PO₄⁻.

Phosphate ion targeted colorimetric and fluorescent probe and its use to monitor endogeneous phosphate ion in a hemichannel-closed cell

Fluorescent probe 1, the first inorganic phosphate (Pi) targeted colorimetric and fluorescent probe to detect endogenous Pi in hemichannel-closed cells, has been developed. Probe 1 undergoes a unique Pi induced hydrolytic reaction in DMSO-HEPES (V/V = 9:1) buffered (0.02 M, pH 7.4) solutions that produces a colorimetric change associated with a 62 nm red-shift in the UV-vis absorption maximum and up to a 780-fold enhancement in the fluorescence intensity. The mechanistic proposal that these spectroscopic changes are associated with reaction Pi with 1 to form coumarin gains support from the results of theoretical calculations and mass spectrometry studies. Observations made in fluorescence imaging studies with HeLa cells and C. elegans show that 1 can be employed to monitor Pi production in vivo caused by apyrase-catalyzed ATP hydrolysis. Moreover, probe 1 was utilized to show that apoptosis of hemichannel-closed Sf9 cells is caused by Inx3 promoted dephosphorylation of Akt (RAC serine/threonine-protein kinase), leading to an elevation of the concentration of Pi. Overall, the study has produced the first fluorescent sensor 1 for endogenous inorganic phosphate. Moreover, the utility of 1 for measuring Pi release in vitro has been demonstrated and utilized to elucidate the mechanism of Inx3 action in hemichannel-closed Sf9 cells.

Hydrazone-based switches, metallo-assemblies and sensors

The hydrazone functional group has been extensively studied and used in the context of supramolecular chemistry. Its pervasiveness and versatility can be attributed to its ease of synthesis, modularity, and most importantly unique structural properties, which enable its integration in different applications. This review provides an overview of the utilization of hydrazones in three supramolecular chemistry related areas: molecular switches, metallo-assemblies and sensors. These topics were chosen because they highlight the diversity of hydrazones, and emphasize their uniqueness vis-à-vis the imine functional group. Discussion entails (i) chemical and light activated switching of hydrazones, and how this can be used in controlling the properties of self-assembled systems, (ii) the use of hydrazones in the formation of dynamic and stimuli responsive metallogrids, and (iii) the use of hydrazones in detecting metal cations (Zn(2+), Cu(2+), Hg(2+), etc.), anions (F(-), CN(-), P2O7(4-), etc.) and neutral molecules (amines, water, Cys, etc.).

Novel and selective detection of Tabun mimics

Detection of nerve agent-related molecules based on BODIPY–salicylaldehyde oxime conjugation was studied.

A BODIPY-based reactive probe for the detection of Au(iii) species and its application to cell imaging

A BODIPY-based chemodosimeter for turn-on detection of gold ions which relies on a novel CN bond hydrolysis mechanism.

NIR sensing of Zn(ii) and subsequent dihydrogen phosphate detection by a benzothiazole functionalized ninhydrin based receptor

Zn²⁺ responsive (NIR) benzothiazole functionalized ninhydrin based receptor selectively sense H₂PO₄⁻ ion.