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Intermolecular Interactions in Functional Crystalline Materials: From Data to Knowledge. CRYSTALS 2019. [DOI: 10.3390/cryst9090478] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Intermolecular interactions of organic, inorganic, and organometallic compounds are the key to many composition–structure and structure–property networks. In this review, some of these relations and the tools developed by the Cambridge Crystallographic Data Center (CCDC) to analyze them and design solid forms with desired properties are described. The potential of studies supported by the Cambridge Structural Database (CSD)-Materials tools for investigation of dynamic processes in crystals, for analysis of biologically active, high energy, optical, (electro)conductive, and other functional crystalline materials, and for the prediction of novel solid forms (polymorphs, co-crystals, solvates) are discussed. Besides, some unusual applications, the potential for further development and limitations of the CCDC software are reported.
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Liang X, Chen Y, Wang L, Zhang F, Fan Z, Cao T, Cao Y, Zhu H, He X, Deng B, You Y, Dong Y, Zhao Y. Effect of carbon-skeleton isomerism on the dielectric properties and proton conduction of organic cocrystal compounds assembled from 1,2,4,5-benzenetetracarboxylic acid and piperazine derivatives. NEW J CHEM 2019. [DOI: 10.1039/c9nj01412h] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Two isostructural 2D supramolecular cocrystal compounds show different dielectric responses and proton conductivities due to the alteration of the carbon-skeleton of piperazine derivatives.
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Huang YG, Shiota Y, Su SQ, Wu SQ, Yao ZS, Li GL, Kanegawa S, Kang S, Kamachi T, Yoshizawa K, Ariga K, Sato O. Thermally Induced Intra-Carboxyl Proton Shuttle in a Molecular Rack-and-Pinion Cascade Achieving Macroscopic Crystal Deformation. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201607886] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- You-Gui Huang
- Institute for Materials Chemistry and Engineering; Kyushu University; 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
- World Premier International (WPI) Center for Materials Nanoarchitectonics (MANA); Institute for Materials Science (NIMS); 1-1 Namiki Tsukuba Ibaraki 305-0044 Japan
| | - Yoshihito Shiota
- Institute for Materials Chemistry and Engineering; Kyushu University; 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Sheng-Qun Su
- Institute for Materials Chemistry and Engineering; Kyushu University; 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Shu-Qi Wu
- Institute for Materials Chemistry and Engineering; Kyushu University; 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Zi-Shuo Yao
- Institute for Materials Chemistry and Engineering; Kyushu University; 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Guo-Ling Li
- Institute for Materials Chemistry and Engineering; Kyushu University; 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Shinji Kanegawa
- Institute for Materials Chemistry and Engineering; Kyushu University; 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Soonchul Kang
- Institute for Materials Chemistry and Engineering; Kyushu University; 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Takashi Kamachi
- Institute for Materials Chemistry and Engineering; Kyushu University; 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Kazunari Yoshizawa
- Institute for Materials Chemistry and Engineering; Kyushu University; 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Katsuhiko Ariga
- World Premier International (WPI) Center for Materials Nanoarchitectonics (MANA); Institute for Materials Science (NIMS); 1-1 Namiki Tsukuba Ibaraki 305-0044 Japan
| | - Osamu Sato
- Institute for Materials Chemistry and Engineering; Kyushu University; 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
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Huang Y, Shiota Y, Su S, Wu S, Yao Z, Li G, Kanegawa S, Kang S, Kamachi T, Yoshizawa K, Ariga K, Sato O. Thermally Induced Intra‐Carboxyl Proton Shuttle in a Molecular Rack‐and‐Pinion Cascade Achieving Macroscopic Crystal Deformation. Angew Chem Int Ed Engl 2016; 55:14628-14632. [DOI: 10.1002/anie.201607886] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2016] [Revised: 09/19/2016] [Indexed: 11/08/2022]
Affiliation(s)
- You‐Gui Huang
- Institute for Materials Chemistry and Engineering Kyushu University 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
- World Premier International (WPI) Center for Materials Nanoarchitectonics (MANA) Institute for Materials Science (NIMS) 1-1 Namiki Tsukuba Ibaraki 305-0044 Japan
| | - Yoshihito Shiota
- Institute for Materials Chemistry and Engineering Kyushu University 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Sheng‐Qun Su
- Institute for Materials Chemistry and Engineering Kyushu University 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Shu‐Qi Wu
- Institute for Materials Chemistry and Engineering Kyushu University 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Zi‐Shuo Yao
- Institute for Materials Chemistry and Engineering Kyushu University 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Guo‐Ling Li
- Institute for Materials Chemistry and Engineering Kyushu University 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Shinji Kanegawa
- Institute for Materials Chemistry and Engineering Kyushu University 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Soonchul Kang
- Institute for Materials Chemistry and Engineering Kyushu University 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Takashi Kamachi
- Institute for Materials Chemistry and Engineering Kyushu University 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Kazunari Yoshizawa
- Institute for Materials Chemistry and Engineering Kyushu University 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
| | - Katsuhiko Ariga
- World Premier International (WPI) Center for Materials Nanoarchitectonics (MANA) Institute for Materials Science (NIMS) 1-1 Namiki Tsukuba Ibaraki 305-0044 Japan
| | - Osamu Sato
- Institute for Materials Chemistry and Engineering Kyushu University 744 Motooka Nishi-ku Fukuoka 819-0395 Japan
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Mitsumi M, Ezaki K, Komatsu Y, Toriumi K, Miyatou T, Mizuno M, Azuma N, Miyazaki Y, Nakano M, Kitagawa Y, Hanashima T, Kiyanagi R, Ohhara T, Nakasuji K. Proton Order-Disorder Phenomena in a Hydrogen-Bonded Rhodium-η(5)-Semiquinone Complex: A Possible Dielectric Response Mechanism. Chemistry 2015; 21:9682-96. [PMID: 26032896 DOI: 10.1002/chem.201500796] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2015] [Indexed: 11/06/2022]
Abstract
A newly synthesized one-dimensional (1D) hydrogen-bonded (H-bonded) rhodium(II)-η(5)-semiquinone complex, [Cp*Rh(η(5)-p-HSQ-Me4)]PF6 ([1]PF6; Cp* = 1,2,3,4,5-pentamethylcyclopentadienyl; HSQ = semiquinone) exhibits a paraelectric-antiferroelectric second-order phase transition at 237.1 K. Neutron and X-ray crystal structure analyses reveal that the H-bonded proton is disordered over two sites in the room-temperature (RT) phase. The phase transition would arise from this proton disorder together with rotation or libration of the Cp* ring and PF6(-) ion. The relative permittivity εb' along the H-bonded chains reaches relatively high values (ca., 130) in the RT phase. The temperature dependence of (13)C CP/MAS NMR spectra demonstrates that the proton is dynamically disordered in the RT phase and that the proton exchange has already occurred in the low-temperature (LT) phase. Rate constants for the proton exchange are estimated to be 10(-4)-10(-6) s in the temperature range of 240-270 K. DFT calculations predict that the protonation/deprotonation of [1](+) leads to interesting hapticity changes of the semiquinone ligand accompanied by reduction/oxidation by the π-bonded rhodium fragment, producing the stable η(6)-hydroquinone complex, [Cp*Rh(3+)(η(6)-p-H2Q-Me4)](2+) ([2](2+)), and η(4)-benzoquinone complex, [Cp*Rh(+)(η(4)-p-BQ-Me4)] ([3]), respectively. Possible mechanisms leading to the dielectric response are discussed on the basis of the migration of the protonic solitons comprising of [2](2+) and [3], which would be generated in the H-bonded chain.
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Affiliation(s)
- Minoru Mitsumi
- Department of Material Science, Graduate School of Material Science, University of Hyogo and, Research Center for New Functional Materials, Graduate School of Material Science, University of Hyogo, 3-2-1 Kouto, Kamigori-cho, Ako-gun, Hyogo 678-1297 (Japan).
| | - Kazunari Ezaki
- Department of Material Science, Graduate School of Material Science, University of Hyogo and, Research Center for New Functional Materials, Graduate School of Material Science, University of Hyogo, 3-2-1 Kouto, Kamigori-cho, Ako-gun, Hyogo 678-1297 (Japan)
| | - Yuuki Komatsu
- Department of Material Science, Graduate School of Material Science, University of Hyogo and, Research Center for New Functional Materials, Graduate School of Material Science, University of Hyogo, 3-2-1 Kouto, Kamigori-cho, Ako-gun, Hyogo 678-1297 (Japan)
| | - Koshiro Toriumi
- Department of Material Science, Graduate School of Material Science, University of Hyogo and, Research Center for New Functional Materials, Graduate School of Material Science, University of Hyogo, 3-2-1 Kouto, Kamigori-cho, Ako-gun, Hyogo 678-1297 (Japan)
| | - Tatsuya Miyatou
- Department of Chemistry, Graduate School of Natural Science & Technology, Kanazawa University, Kakuma, Kanazawa, Ishikawa 920-1192 (Japan)
| | - Motohiro Mizuno
- Department of Chemistry, Graduate School of Natural Science & Technology, Kanazawa University, Kakuma, Kanazawa, Ishikawa 920-1192 (Japan).
| | - Nobuaki Azuma
- Research Center for Structural Thermodynamics, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043 (Japan)
| | - Yuji Miyazaki
- Research Center for Structural Thermodynamics, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043 (Japan).
| | - Motohiro Nakano
- Research Center for Structural Thermodynamics, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043 (Japan)
| | - Yasutaka Kitagawa
- Department of Materials Engineering Science, Graduate School of Engineering Science, Osaka University, 1-3 Machikaneyama, Toyonaka, Osaka 560-8531 (Japan).
| | - Takayasu Hanashima
- Research Center for Neutron Science and Technology, CROSS Tokai, Ibaraki 319-1106 (Japan)
| | - Ryoji Kiyanagi
- J-PARC center, Japan Atomic Energy Agency, Tokai, Ibaraki 319-1195 (Japan)
| | - Takashi Ohhara
- J-PARC center, Japan Atomic Energy Agency, Tokai, Ibaraki 319-1195 (Japan).
| | - Kazuhiro Nakasuji
- School of Materials Science, Fukui University of Technology, 3-6 Gakuen, Fukui 910-8505 (Japan)
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6
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Lai W, Tang D, Fu L, Que X, Zhuang J, Chen G. A squaric acid-stimulated electrocatalytic reaction for sensing biomolecules with cycling signal amplification. Chem Commun (Camb) 2013; 49:4761-3. [DOI: 10.1039/c3cc41708e] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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7
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Morimoto M, Takashio N, Irie M. Crystal Structures and Dielectric Properties of 2-Imidazoline Derivatives Having Intermolecular Hydrogen-bonded Networks. CHEM LETT 2012. [DOI: 10.1246/cl.2012.525] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Masakazu Morimoto
- Department of Chemistry, Rikkyo University
- Research Center for Smart Molecules, Rikkyo University
- Precursory Research for Embryonic Science and Technology (PRESTO), Japan Science and Technology Agency (JST)
| | | | - Masahiro Irie
- Department of Chemistry, Rikkyo University
- Research Center for Smart Molecules, Rikkyo University
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8
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Basak D, Versek C, Toscano DT, Christensen S, Tuominen MT, Venkataraman D. Anhydrous proton conductivities of squaric acid derivatives. Chem Commun (Camb) 2012; 48:5922-4. [DOI: 10.1039/c2cc31283b] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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9
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Squaric acid is a suitable building-block in 4C-Ugi reaction: access to original bivalent compounds. Tetrahedron Lett 2012. [DOI: 10.1016/j.tetlet.2011.11.077] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
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10
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Morimoto M, Irie M. Photochemical control of dielectric properties based on intermolecular proton transfer in a hydrogen-bonded diarylethene crystal. Chem Commun (Camb) 2011; 47:4186-8. [DOI: 10.1039/c0cc05729k] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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11
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Activation of Small Molecules by U(III) Cyclooctatetraene and Pentalene Complexes. STRUCTURE AND BONDING 2008. [DOI: 10.1007/430_2007_078] [Citation(s) in RCA: 46] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
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12
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Tadokoro M, Inoue T, Tamaki S, Fujii K, Isogai K, Nakazawa H, Takeda S, Isobe K, Koga N, Ichimura A, Nakasuji K. Mixed-Valence States Stabilized by Proton Transfer in a Hydrogen-Bonded Biimidazolate Rhenium Dimer. Angew Chem Int Ed Engl 2007; 46:5938-42. [PMID: 17614342 DOI: 10.1002/anie.200701277] [Citation(s) in RCA: 37] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Makoto Tadokoro
- Department of Chemistry, Faculty of Science, Tokyo University of Science, Kagurazaka 1-3, Tokyo 162-8601, Japan.
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13
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Mixed-Valence States Stabilized by Proton Transfer in a Hydrogen-Bonded Biimidazolate Rhenium Dimer. Angew Chem Int Ed Engl 2007. [DOI: 10.1002/ange.200701277] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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14
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Summerscales OT, Cloke FGN, Hitchcock PB, Green JC, Hazari N. Reductive Cyclotetramerization of CO to Squarate by a U(III) Complex: The X-ray Crystal Structure of [(U (η-C8H6{SiiPr3-1,4}2)(η-C5Me4H)]2(μ-η2: η2-C4O4). J Am Chem Soc 2006; 128:9602-3. [PMID: 16866493 DOI: 10.1021/ja063222r] [Citation(s) in RCA: 137] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The U(III) mixed-sandwich compound [U(eta-C5Me4H)(eta-C8H6{SiiPr3-1,4}2)(THF)] 1 may be prepared by sequential reaction of UI3 with K[C5Me4H] in THF followed by K2[C8H6{SiiPr3-1,4}2]. 1 reacts with carbon monoxide at -30 degrees C and 1 bar pressure in toluene solution to afford the crystallographically characterized dimer [(U(eta-C8H6{SiiPr3-1,4}2)(eta-C5Me4H)]2(mu-eta2: eta2-C4O4) 2, which contains a bridging squarate unit derived from reductive cyclotetramerization of CO. DFT computational studies indicate that addition of a 4th molecule of CO to the model deltate complex [U(eta-COT)(eta-Cp)]2(mu-eta1: eta2-C3O3)] to form the squarate complex [U(eta-COT)(eta-Cp)]2(mu-eta2: eta2-C4O4)] is exothermic by 136 kJ mol-1.
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Affiliation(s)
- Owen T Summerscales
- The Department of Chemistry, School of Life Sciences, University of Sussex, Brighton BN1 9QJ, United Kingdom
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15
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Ye Q, Song YM, Wang GX, Chen K, Fu DW, Chan PWH, Zhu JS, Huang SD, Xiong RG. Ferroelectric Metal−Organic Framework with a High Dielectric Constant. J Am Chem Soc 2006; 128:6554-5. [PMID: 16704244 DOI: 10.1021/ja060856p] [Citation(s) in RCA: 382] [Impact Index Per Article: 20.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Hydrothermal reaction of (l)-N-(4'-cyanobenzy)-(S)-proline with CdCl2 as a Lewis acid catalyst and NaN3 gives colorless block compound 1, in which 1 displays a complicated 3D framework. Ferroelectric and dielectric property measurements reveal that 1 exhibits physical properties comparable to that of a typical ferroelectric compound with a dipole relaxation process and a dielectric constant of ca. 38.6 that makes it, by definition, a high dielectric material.
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Affiliation(s)
- Qiong Ye
- The State Key Laboratory of Coordination Chemistry, Nanjing University, Nanjing 210093, P. R. China
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16
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Yamamura S, Sugawara Y, Terao H, Matsushita MM, Sugawara T. Dielectric properties associated with structural phase transitions observed in tetramethylammonium salt of o-phenylenebis(squaric acid). Chem Phys 2006. [DOI: 10.1016/j.chemphys.2005.08.073] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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17
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Fei Z, Zhao D, Geldbach TJ, Scopelliti R, Dyson PJ, Antonijevic S, Bodenhausen G. A Synthetic Zwitterionic Water Channel: Characterization in the Solid State by X-ray Crystallography and NMR Spectroscopy. Angew Chem Int Ed Engl 2005; 44:5720-5. [PMID: 16059949 DOI: 10.1002/anie.200500207] [Citation(s) in RCA: 145] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Zhaofu Fei
- Institut des Sciences et Ingénierie Chimiques, Ecole Polytechnique Fédérale de Lausanne, EPFL-BCH, 1015 Lausanne, Switzerland
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Fei Z, Zhao D, Geldbach TJ, Scopelliti R, Dyson PJ, Antonijevic S, Bodenhausen G. A Synthetic Zwitterionic Water Channel: Characterization in the Solid State by X-ray Crystallography and NMR Spectroscopy. Angew Chem Int Ed Engl 2005. [DOI: 10.1002/ange.200500207] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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19
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Luna-García R, Damián-Murillo BM, Barba V, Höpfl H, Beltrán HI, Zamudio-Rivera LS. Structural relationship between a host included chain of spirocyclic water hexamers and bulk water – the role of water clusters in self assembly and crystallization processes. Chem Commun (Camb) 2005:5527-9. [PMID: 16358051 DOI: 10.1039/b509787h] [Citation(s) in RCA: 59] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Infinite chains of spirocyclic water hexamers are included in the crystal lattice of a tin complex with a curved, hydrophobic surface and only weak intermolecular bonding interactions between the host molecules, so that the enclosed water clusters might be reminiscent of the solvation sphere in solution.
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Affiliation(s)
- Rolando Luna-García
- Centro de Investigaciones Químicas, Universidad Autónoma del Estado de Morelos, Av. Universidad 1001, C.P., 62209, Cuernavaca, México
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20
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Takasu I, Sugawara T, Mochida T. Dielectric Response in Bisquaric Acid Crystal: Possible Generation of Protonic Soliton in a Quasi-One-Dimensional Hydrogen-Bonded System. J Phys Chem B 2004. [DOI: 10.1021/jp030540t] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Isao Takasu
- Department of Basic Science, Graduate School of Arts and Sciences, The University of Tokyo, Komaba, Meguro-ku, Tokyo 153-8902, Japan
| | - Tadashi Sugawara
- Department of Basic Science, Graduate School of Arts and Sciences, The University of Tokyo, Komaba, Meguro-ku, Tokyo 153-8902, Japan
| | - Tomoyuki Mochida
- Department of Chemistry, Faculty of Science, Toho University, Miyama, Funabashi, Chiba 274-8510, Japan
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Karpan VM, Zolotaryuk Y, Christiansen PL, Zolotaryuk AV. Discrete kink dynamics in hydrogen-bonded chains: the two-component model. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2004; 70:056602. [PMID: 15600774 DOI: 10.1103/physreve.70.056602] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2003] [Revised: 04/06/2004] [Indexed: 05/24/2023]
Abstract
We study discrete topological solitary waves (kinks and antikinks) in two nonlinear diatomic chain models that describe the collective dynamics of proton transfers in one-dimensional hydrogen-bonded networks. The essential ingredients of the models are (i) a realistic (anharmonic) ion-proton interaction in the hydrogen bond, (ii) a harmonic coupling between the protons in adjacent hydrogen bonds, and (iii) a harmonic coupling between the nearest-neighbor heavy ions (an isolated diatomic chain with the lowest acoustic band) or instead a harmonic on-site potential for the heavy ions (a diatomic chain subject to a substrate with two optical bands), both providing a bistability of the hydrogen-bonded proton. Exact two-component (kink and antikink) discrete solutions for these models are found numerically. We compare the soliton solutions and their properties in both the one- (when the heavy ions are fixed) and two-component models. The effect of stability switchings, discovered previously for a class of one-component kink-bearing models, is shown to exist in these two-component models as well. However, the presence of the second component, i.e., the softness of the heavy-ion sublattice, brings principal differences, like a significant difference in the stability switchings behavior for the kinks and the antikinks. Water-filled carbon nanotubes are briefly discussed as possible realistic systems, where topological discrete (anti)kink states might exist.
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Affiliation(s)
- V M Karpan
- Section of Mathematical Physics, IMM, Technical University of Denmark, DK-2800 Lyngby, Denmark
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22
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Akutagawa T, Takeda S, Hasegawa T, Nakamura T. Proton Transfer and a Dielectric Phase Transition in the Molecular Conductor (HDABCO+)2(TCNQ)3. J Am Chem Soc 2003; 126:291-4. [PMID: 14709094 DOI: 10.1021/ja0377697] [Citation(s) in RCA: 98] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
One-dimensional dielectric (N.H.N)( infinity ) hydrogen-bonding chains of monoprotonated 1,4-diazabicyclo[2.2.2]octane (HDABCO(+)) were introduced into an electrically conducting 7,7,8,8-tetracyano-p-quinodimethane (TCNQ) salt as the countercation structure. Room-temperature electrical conductivity was approximately 10(-)(3) S cm(-)(1), with a semiconductive behavior. The temperature-dependent dielectric constants of (HDABCO(+))(2)(TCNQ)(3) indicated a dielectric transition at 306 K. A large deuterium isotope effect for the dielectric transition (DeltaT = 70 K) was observed for the deuterated salt, (DDABCO(+))(2)(TCNQ)(3). Thermally activated order/disorder of the protons or deuteriums within the one-dimensional hydrogen-bonding chains of (HDABCO(+))( infinity ) and (DDABCO(+))( infinity ) affected the dielectric responses in the TCNQ-based semiconductors.
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Affiliation(s)
- Tomoyuki Akutagawa
- Research Institute for Electronic Science, Hokkaido University, Sapporo 060-0812, Japan.
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23
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Kawata S, Adachi K, Sugiyama Y, Kabir MK, Kaizaki S. Proton-transfer-mediated crystal engineering using 1,4,5,6-tetrahydro-5,6-dioxo-2,3-pyrazinedicarbonitrile with 4,4′-bipyridine. CrystEngComm 2002. [DOI: 10.1039/b205927b] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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