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Ovalle S, Malardier‐Jugroot C. Modulating the oxygen affinity of porphyrins with metals, ligands, and functional groups: A DFT study. J Comput Chem 2025; 46:e27505. [PMID: 39643923 PMCID: PMC11624296 DOI: 10.1002/jcc.27505] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2023] [Revised: 06/06/2024] [Accepted: 09/08/2024] [Indexed: 12/09/2024]
Abstract
The interaction between different metals (M), axial ligands (L), and ring substituents (R) in porphyrins was investigated using density functional theory. Different combinations of iron and cobalt as metal centers; imidazole, chlorine, and an n-heterocyclic carbene (NHC) as axial ligands, and unsubstituted, octaethyl-, and tetraphenyl-porphyrins were explored in their low, intermediate, and high-spin states, alongside oxygen affinity. Remarkably, the n-heterocyclic carbene enhanced the affinity of cobalt porphyrins to oxygen, with binding energies on average 4.4 kcal mol-1 higher than FeP with the same ligand, and 0.78 kcal mol-1 higher than FeP with imidazole. The planarity of the iron tetraphenyl porphyrin with imidazole compared to its ruffled cobalt counterpart is noteworthy in both oxy- and deoxy-forms, highlighting imidazole's stabilizing influence on the porphyrin structure, particularly iron porphyrins, alongside imidazole's stabilizing effect on the affinity to O2. Despite the significant non-planarity induced by NHC as an axial ligand -regardless of the metal or ring substituent used-, it did not hinder the affinity of CoP to O2 (14.26 kcal mol-1, on average) as it did with the FeP with NHC (9.88 kcal mol-1, on average). Cobalt porphyrins with n-heterocyclic carbene ligands show promising potential for O2 activation or oxygen transport applications. The results show the complex interactions between the different parts of metalloporphyrins and highlight the capability of tailoring their affinity to O2. It also exemplifies the stabilizing effect of imidazole on the porphyrins, providing a very narrow range of binding energies and smaller differences in their geometries.
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Affiliation(s)
- Sebastian Ovalle
- Department of Chemistry and Chemical EngineeringRoyal Military College of CanadaKingstonOntarioCanada
| | - Cecile Malardier‐Jugroot
- Department of Chemistry and Chemical EngineeringRoyal Military College of CanadaKingstonOntarioCanada
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2
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Ju D, Modi V, Khade RL, Zhang Y. Mechanistic investigation of sustainable heme-inspired biocatalytic synthesis of cyclopropanes for challenging substrates. Commun Chem 2024; 7:279. [PMID: 39613908 DOI: 10.1038/s42004-024-01371-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2024] [Accepted: 11/19/2024] [Indexed: 12/01/2024] Open
Abstract
Engineered heme proteins exhibit excellent sustainable catalytic carbene transfer reactivities toward olefins for value-added cyclopropanes. However, unactivated and electron-deficient olefins remain challenging in such reactions. To help design efficient heme-inspired biocatalysts for these difficult situations, a systematic quantum chemical mechanistic study was performed to investigate effects of olefin substituents, non-native amino acid axial ligands, and natural and non-natural macrocycles with the widely used ethyl diazoacetate. Results show that electron-deficient substrate ethyl acrylate has a much higher barrier than the electron-rich styrene. For styrene, the predicted barrier trend is consistent with experimentally used heme analogue cofactors, which can significantly reduce barriers. For ethyl acrylate, while the best non-native axial ligand only marginally improves the reactivity versus the native histidine model, a couple of computationally studied macrocycles can dramatically reduce barriers to the level comparable to styrene. These results will facilitate the development of better biocatalysts in this area.
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Affiliation(s)
- Dongrun Ju
- Department of Chemistry and Chemical Biology, Stevens Institute of Technology, 1 Castle Point Terrace, Hoboken, NJ, 07030, USA
| | - Vrinda Modi
- Department of Chemistry and Chemical Biology, Stevens Institute of Technology, 1 Castle Point Terrace, Hoboken, NJ, 07030, USA
| | - Rahul L Khade
- Department of Chemistry and Chemical Biology, Stevens Institute of Technology, 1 Castle Point Terrace, Hoboken, NJ, 07030, USA
| | - Yong Zhang
- Department of Chemistry and Chemical Biology, Stevens Institute of Technology, 1 Castle Point Terrace, Hoboken, NJ, 07030, USA.
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3
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Lincoln ZS, Iluc VM. Iron Olefin Metathesis: Unlocking Reactivity and Mechanistic Insights. J Am Chem Soc 2024; 146:17595-17599. [PMID: 38889011 DOI: 10.1021/jacs.4c04356] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/20/2024]
Abstract
Olefin metathesis catalyzed by iron complexes has garnered substantial interest due to iron's abundance and nontoxicity relative to ruthenium, yet its full potential remains untapped, largely because of the propensity of iron carbenes to undergo cyclopropanation instead of cycloreversion from a metallacycle intermediate. In this report, we elucidate the reactions of [{PC(sp2)P}Fe(L)(N2)], ([PC(sp2)P] = bis[2-(diisopropylphosphino)phenyl]methylene) with strained olefins, unveiling their capability to yield metathesis-related products. Our investigations led to the isolation of a structurally characterized metallacyclobutane during the reaction with norbornadiene derivatives, ultimately leading to a ring-opened iron alkylidene. These findings provide compelling evidence that iron complexes adhere to the Chauvin olefin metathesis mechanism.
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Affiliation(s)
- Zachary S Lincoln
- Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556, United States
| | - Vlad M Iluc
- Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556, United States
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4
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Lee WCC, Wang DS, Zhu Y, Zhang XP. Iron(III)-based metalloradical catalysis for asymmetric cyclopropanation via a stepwise radical mechanism. Nat Chem 2023; 15:1569-1580. [PMID: 37679462 PMCID: PMC10842623 DOI: 10.1038/s41557-023-01317-8] [Citation(s) in RCA: 21] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2022] [Accepted: 08/08/2023] [Indexed: 09/09/2023]
Abstract
Metalloradical catalysis (MRC) exploits the metal-centred radicals present in open-shell metal complexes as one-electron catalysts for the generation of metal-stabilized organic radicals-key intermediates that control subsequent one-electron homolytic reactions. Cobalt(II) complexes of porphyrins, as stable 15e-metalloradicals with a well-defined low-spin d7 configuration, have dominated the ongoing development of MRC. Here, to broaden MRC beyond the use of Co(II)-based metalloradical catalysts, we describe systematic studies that establish the operation of Fe(III)-based MRC and demonstrate an initial application for asymmetric radical transformations. Specifically, we report that five-coordinate iron(III) complexes of porphyrins with an axial ligand, which represent another family of stable 15e-metalloradicals with a d5 configuration, are potent metalloradical catalysts for olefin cyclopropanation with different classes of diazo compounds via a stepwise radical mechanism. This work lays a foundation and mechanistic blueprint for future exploration of Fe(III)-based MRC towards the discovery of diverse stereoselective radical reactions.
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Affiliation(s)
- Wan-Chen Cindy Lee
- Department of Chemistry, Merkert Chemistry Center, Boston College, Chestnut Hill, MA, USA
| | - Duo-Sheng Wang
- Department of Chemistry, Merkert Chemistry Center, Boston College, Chestnut Hill, MA, USA
| | - Yiling Zhu
- Department of Chemistry, Merkert Chemistry Center, Boston College, Chestnut Hill, MA, USA
| | - X Peter Zhang
- Department of Chemistry, Merkert Chemistry Center, Boston College, Chestnut Hill, MA, USA.
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5
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Epping RF, Vesseur D, Zhou M, de Bruin B. Carbene Radicals in Transition-Metal-Catalyzed Reactions. ACS Catal 2023; 13:5428-5448. [PMID: 37123600 PMCID: PMC10127290 DOI: 10.1021/acscatal.3c00591] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2023] [Revised: 03/21/2023] [Indexed: 04/08/2023]
Abstract
Discovered as organometallic curiosities in the 1970s, carbene radicals have become a staple in modern-day homogeneous catalysis. Carbene radicals exhibit nucleophilic radical-type reactivity orthogonal to classical electrophilic diamagnetic Fischer carbenes. Their successful catalytic application has led to the synthesis of a myriad of carbo- and heterocycles, ranging from simple cyclopropanes to more challenging eight-membered rings. The field has matured to employ densely functionalized chiral porphyrin-based platforms that exhibit high enantio-, regio-, and stereoselectivity. Thus far the focus has largely been on cobalt-based systems, but interest has been growing for the past few years to expand the application of carbene radicals to other transition metals. This Perspective covers the advances made since 2011 and gives an overview on the coordination chemistry, reactivity, and catalytic application of carbene radical species using transition metal complexes and catalysts.
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Affiliation(s)
- Roel F.J. Epping
- Homogeneous, Supramolecular and Bio-Inspired Catalysis Group, van ‘t Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
| | - David Vesseur
- Homogeneous, Supramolecular and Bio-Inspired Catalysis Group, van ‘t Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
| | - Minghui Zhou
- Homogeneous, Supramolecular and Bio-Inspired Catalysis Group, van ‘t Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
| | - Bas de Bruin
- Homogeneous, Supramolecular and Bio-Inspired Catalysis Group, van ‘t Hoff Institute for Molecular Sciences (HIMS), University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands
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6
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Danelius E, Porter NJ, Unge J, Arnold FH, Gonen T. MicroED Structure of a Protoglobin Reactive Carbene Intermediate. J Am Chem Soc 2023; 145:7159-7165. [PMID: 36948184 PMCID: PMC10080679 DOI: 10.1021/jacs.2c12004] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/24/2023]
Abstract
Microcrystal electron diffraction (MicroED) is an emerging technique that has shown great potential for describing new chemical and biological molecular structures. Several important structures of small molecules, natural products, and peptides have been determined using ab initio methods. However, only a couple of novel protein structures have thus far been derived by MicroED. Taking advantage of recent technological advances, including higher acceleration voltage and using a low-noise detector in counting mode, we have determined the first structure of an Aeropyrum pernix protoglobin (ApePgb) variant by MicroED using an AlphaFold2 model for phasing. The structure revealed that mutations introduced during directed evolution enhance carbene transfer activity by reorienting an α helix of ApePgb into a dynamic loop, making the catalytic active site more readily accessible. After exposing the tiny crystals to the substrate, we also trapped the reactive iron-carbenoid intermediate involved in this engineered ApePgb's new-to-nature activity, a challenging carbene transfer from a diazirine via a putative metallo-carbene. The bound structure discloses how an enlarged active site pocket stabilizes the carbene bound to the heme iron and, presumably, the transition state for the formation of this key intermediate. This work demonstrates that improved MicroED technology and the advancement in protein structure prediction now enable investigation of structures that was previously beyond reach.
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Affiliation(s)
- Emma Danelius
- Department of Biological Chemistry, University of California, Los Angeles, 615 Charles E. Young Drive South, Los Angeles, California 90095, United States
- Howard Hughes Medical Institute, University of California, Los Angeles, Los Angeles, California 90095, United States
| | - Nicholas J Porter
- Division of Chemistry and Chemical Engineering, California Institute of Technology, 1200 East California Boulevard, MC 210-41, Pasadena, California 91125, United States
| | - Johan Unge
- Department of Biological Chemistry, University of California, Los Angeles, 615 Charles E. Young Drive South, Los Angeles, California 90095, United States
| | - Frances H Arnold
- Division of Chemistry and Chemical Engineering, California Institute of Technology, 1200 East California Boulevard, MC 210-41, Pasadena, California 91125, United States
| | - Tamir Gonen
- Department of Biological Chemistry, University of California, Los Angeles, 615 Charles E. Young Drive South, Los Angeles, California 90095, United States
- Howard Hughes Medical Institute, University of California, Los Angeles, Los Angeles, California 90095, United States
- Department of Physiology, University of California, Los Angeles, 615 Charles E. Young Drive South, Los Angeles, California 90095, United States
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7
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Ma C, Wang S, Sheng Y, Zhao XL, Xing D, Hu W. Synthesis and Characterization of Donor-Acceptor Iron Porphyrin Carbenes and Their Reactivities in N-H Insertion and Related Three-Component Reaction. J Am Chem Soc 2023; 145:4934-4939. [PMID: 36811995 DOI: 10.1021/jacs.2c12155] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/24/2023]
Abstract
Iron porphyrin carbenes (IPCs) have been extensively recognized as the reactive intermediates in various iron porphyrin-catalyzed carbene transfer reactions. While donor-acceptor diazo compounds have been frequently used for such transformations, the structures and reactivities of donor-acceptor IPCs are less explored. To date, no crystal structures of donor-acceptor IPC complexes have been reported, and therefore, the involvement of IPC intermediacy for such transformations lacks direct evidence. Here we report the synthesis and NMR characterization of several donor-acceptor IPC complexes from iron porphyrin and corresponding donor-acceptor diazo compounds. The X-ray crystal structure of an IPC complex derived from a morpholine-substituted diazo amide was obtained. The carbene transfer reactivities of those IPCs were tested by the N-H insertion reactions with aniline or morpholine as well as the three-component reaction with aniline and γ,δ-unsaturated α-keto ester based on electrophilic trapping of an ammonium ylide intermediate. Based on these results, IPCs were identified as the real intermediates for iron porphyrin-catalyzed carbene transfer reactions from donor-acceptor diazo compounds.
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Affiliation(s)
- Chaoqun Ma
- Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, China
| | - Shang Wang
- Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, China
| | - Yuan Sheng
- Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, China
| | - Xiao-Li Zhao
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, China
| | - Dong Xing
- Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, China
| | - Wenhao Hu
- Guangdong Key Laboratory of Chiral Molecule and Drug Discovery, School of Pharmaceutical Sciences, Sun Yat-sen University, Guangzhou 510006, China
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8
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Lo VKY, Shing KP, Che CM. Effects of axial C-donor ligands on metalloporphyrin-catalyzed carbene and nitrene transfer reactions. ADVANCES IN ORGANOMETALLIC CHEMISTRY 2023. [DOI: 10.1016/bs.adomc.2022.10.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/22/2023]
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9
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George GM, Wolczanski PT, Cundari TR, MacMillan SN. Reactivity of 1.1.1-Propellane with (silox) 3M (M = Ti, V, Cr): Structures of (silox) 3V═( cC 4H 4)═CH 2 and [(silox) 3Cr–(1.1.1-C 5H 6)−] 2. Organometallics 2022. [DOI: 10.1021/acs.organomet.2c00313] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Gregory M. George
- Department of Chemistry and Chemical Biology, Baker Laboratory, Cornell University Ithaca, New York 14853, United States
| | - Peter T. Wolczanski
- Department of Chemistry and Chemical Biology, Baker Laboratory, Cornell University Ithaca, New York 14853, United States
| | - Thomas R. Cundari
- Department of Chemistry, CasCam University of North Texas Denton, Texas 76201, United States
| | - Samantha N. MacMillan
- Department of Chemistry and Chemical Biology, Baker Laboratory, Cornell University Ithaca, New York 14853, United States
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10
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Hakey BM, Leary DC, Martinez JC, Darmon JM, Akhmedov NG, Petersen JL, Milsmann C. Carbene Transfer from a Pyridine Dipyrrolide Iron–Carbene Complex: Reversible Migration of a Diphenylcarbene Ligand into an Iron–Nitrogen Bond. Organometallics 2022. [DOI: 10.1021/acs.organomet.2c00260] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Brett M. Hakey
- C. Eugene Bennett Department of Chemistry, West Virginia University, Morgantown, West Virginia 26506, United States
| | - Dylan C. Leary
- C. Eugene Bennett Department of Chemistry, West Virginia University, Morgantown, West Virginia 26506, United States
| | - Jordan C. Martinez
- C. Eugene Bennett Department of Chemistry, West Virginia University, Morgantown, West Virginia 26506, United States
| | - Jonathan M. Darmon
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
| | - Novruz G. Akhmedov
- C. Eugene Bennett Department of Chemistry, West Virginia University, Morgantown, West Virginia 26506, United States
| | - Jeffrey L. Petersen
- C. Eugene Bennett Department of Chemistry, West Virginia University, Morgantown, West Virginia 26506, United States
| | - Carsten Milsmann
- C. Eugene Bennett Department of Chemistry, West Virginia University, Morgantown, West Virginia 26506, United States
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11
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Stroscio GD, Zhou C, Truhlar DG, Gagliardi L. Multiconfiguration Pair-Density Functional Theory Calculations of Iron(II) Porphyrin: Effects of Hybrid Pair-Density Functionals and Expanded RAS and DMRG Active Spaces on Spin-State Orderings. J Phys Chem A 2022; 126:3957-3963. [PMID: 35674705 DOI: 10.1021/acs.jpca.2c02347] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Iron(II) porphyrins play critical roles in enzymes and synthetic catalysts. Computationally determining the spin-state ordering for even the unsubstituted iron(II) porphyrin (FeP) is challenging due to its large size. Multiconfiguration pair-density functional theory (MC-PDFT), a method capable of accurately capturing correlation with lower cost than comparably accurate methods, was previously used to predict a triplet ground state for FeP across a wide range of active spaces up to (34e, 35o). The purpose of this present MC-PDFT study is to determine the effects of including nonlocal exchange in the energy calculation and of using a larger active space size [DMRG(40e, 42o) and RAS(40, 2, 2; 16, 6, 20)] on the calculated FeP spin-state ordering. The recently developed hybrid MC-PDFT method, which uses a weighted average of the MC-PDFT energy and the energy expectation value of the reference wave function, is applied with a weight of the reference wave function energy of λ. We find that increasing λ stabilizes the quintet relative to the triplets. The hybrid tPBE0 functional (tPBE with λ set to 0.25) consistently predicts a triplet ground state with the quintet lying above by 0.10-0.16 eV, depending on the reference wave function. These values are particularly interesting in light of tPBE0's very strong performance for a diverse set of other systems.
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Affiliation(s)
- Gautam D Stroscio
- Department of Chemistry, Chicago Center for Theoretical Chemistry, Pritzker School of Molecular Engineering, James Franck Institute, University of Chicago, Chicago, Illinois 60637-5418, United States.,Argonne National Laboratory, Lemont, Illinois 60439, United States
| | - Chen Zhou
- Department of Chemistry, Chemical Theory Center, and Minnesota Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, United States
| | - Donald G Truhlar
- Department of Chemistry, Chemical Theory Center, and Minnesota Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455-0431, United States
| | - Laura Gagliardi
- Department of Chemistry, Chicago Center for Theoretical Chemistry, Pritzker School of Molecular Engineering, James Franck Institute, University of Chicago, Chicago, Illinois 60637-5418, United States.,Argonne National Laboratory, Lemont, Illinois 60439, United States
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12
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He Y, Huang Z, Wu K, Ma J, Zhou YG, Yu Z. Recent advances in transition-metal-catalyzed carbene insertion to C-H bonds. Chem Soc Rev 2022; 51:2759-2852. [PMID: 35297455 DOI: 10.1039/d1cs00895a] [Citation(s) in RCA: 102] [Impact Index Per Article: 34.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
C-H functionalization has been emerging as a powerful method to establish carbon-carbon and carbon-heteroatom bonds. Many efforts have been devoted to transition-metal-catalyzed direct transformations of C-H bonds. Metal carbenes generated in situ from transition-metal compounds and diazo or its equivalents are usually applied as the transient reactive intermediates to furnish a catalytic cycle for new C-C and C-X bond formation. Using this strategy compounds from unactivated simple alkanes to complex molecules can be further functionalized or transformed to multi-functionalized compounds. In this area, transition-metal-catalyzed carbene insertion to C-H bonds has been paid continuous attention. Diverse catalyst design strategies, synthetic methods, and potential applications have been developed. This critical review will summarize the advance in transition-metal-catalyzed carbene insertion to C-H bonds dated up to July 2021, by the categories of C-H bonds from aliphatic C(sp3)-H, aryl (aromatic) C(sp2)-H, heteroaryl (heteroaromatic) C(sp2)-H bonds, alkenyl C(sp2)-H, and alkynyl C(sp)-H, as well as asymmetric carbene insertion to C-H bonds, and more coverage will be given to the recent work. Due to the rapid development of the C-H functionalization area, future directions in this topic are also discussed. This review will give the authors an overview of carbene insertion chemistry in C-H functionalization with focus on the catalytic systems and synthetic applications in C-C bond formation.
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Affiliation(s)
- Yuan He
- Dalian Institute of Chemical Physics, Chinese Academy of Sciences, 457 Zhongshan Road, Dalian 116023, P. R. China. .,University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Zilong Huang
- Dalian Institute of Chemical Physics, Chinese Academy of Sciences, 457 Zhongshan Road, Dalian 116023, P. R. China. .,University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Kaikai Wu
- Dalian Institute of Chemical Physics, Chinese Academy of Sciences, 457 Zhongshan Road, Dalian 116023, P. R. China.
| | - Juan Ma
- Dalian Institute of Chemical Physics, Chinese Academy of Sciences, 457 Zhongshan Road, Dalian 116023, P. R. China. .,University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Yong-Gui Zhou
- Dalian Institute of Chemical Physics, Chinese Academy of Sciences, 457 Zhongshan Road, Dalian 116023, P. R. China.
| | - Zhengkun Yu
- Dalian Institute of Chemical Physics, Chinese Academy of Sciences, 457 Zhongshan Road, Dalian 116023, P. R. China. .,State Key Laboratory of Organometallic Chemistry, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, 354 Fenglin Road, Shanghai 200032, P. R. China.,Innovation Academy for Green Manufacture, Chinese Academy of Sciences, Beijing 100190, P. R. China
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13
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Chen X, Cao C, Yang YF, She YB. Computational Insights into Different Regioselectivities in Ir-Porphyrin-Catalyzed C–H Insertion Reaction of Quinoid Carbene. Org Chem Front 2022. [DOI: 10.1039/d1qo01727f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The mechanisms and regioselectivities of Ir-porphyrin-catalyzed C–H insertion reaction of quinoid carbene (QC) were investigated with density functional theory (DFT) calculations. The competing catalytic cycles were identified as the hydrogen-atom...
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14
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George GM, Wolczanski PT, MacMillan SN. Attempts at Generating Metathesis-Active Fe(IV) and Co(IV) Complexes via the Reactions of (silox)2M(THF)2, [(silox)3M][Na(THF)2] (M = Fe, Co), and Related Species with Propellanes and Triphenylboron. Polyhedron 2022. [DOI: 10.1016/j.poly.2022.115656] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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15
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Wang H, Liu Y, Su C, Schulz CE, Fan Y, Bian Y, Li J. Perspectives on Ligand Properties of N-Heterocyclic Carbenes in Iron Porphyrin Complexes. Inorg Chem 2021; 61:847-856. [PMID: 34962794 DOI: 10.1021/acs.inorgchem.1c02444] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
There has been considerable research interest in the ligand nature of N-heterocyclic carbenes (NHCs). In this work, two six-coordinate NHC iron porphyrin complexes [FeII(TTP)(1,3-Me2Imd)2] (TTP = tetratolylporphyrin, 1,3-Me2Imd = 1,3-dimethylimidazol-2-ylidene) and [FeIII(TDCPP)(1,3-Me2Imd)2]ClO4 (TDCPP = 5,10,15,20-tetrakis(2,6-dichlorophenyl)porphyrin) are reported. Single-crystal X-ray characterizations demonstrate that both complexes have strongly ruffled conformations and relatively perpendicular ligand orientations which are forced by the sterically bulky 1,3-Me2Imd NHC ligands. Multitemperature (4.2-300 K) and high magnetic field (0-9 T) Mössbauer and low-temperature (4.0 K) EPR spectroscopies definitely confirmed the low-spin states of [FeII(TTP)(1,3-Me2Imd)2] (S = 0) and [FeIII(TDCPP)(1,3-Me2Imd)2]ClO4 (S = 1/2). The similarity of 1,3-Me2Imd and imidazole, as well as the well-established correlations between the ligand nature and spectroscopic characteristics of [FeII,III(Porph)(L)2]0,+ (Porph: porphyrin; L: planar base ligand) species, allowed direct comparisons between the pair of ligands which revealed for the first time that NHC has a stronger π-acceptor ability than imidazoles, in addition to its very strong σ-donation.
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Affiliation(s)
- Haimang Wang
- College of Materials Science and Optoelectronic Technology & CAS Center for Excellence in Topological Quantum Computation, University of Chinese Academy of Sciences, Yanqi Lake, Huairou District, Beijing 101408, China
| | - Yulong Liu
- College of Materials Science and Optoelectronic Technology & CAS Center for Excellence in Topological Quantum Computation, University of Chinese Academy of Sciences, Yanqi Lake, Huairou District, Beijing 101408, China
| | - Chaorui Su
- Department of Chemistry, School of Chemistry and Biological Engineering, Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials, and Daxing Research Institute, University of Science and Technology Beijing, Beijing 100083, China
| | - Charles E Schulz
- Department of Physics, Knox College, Galesburg, Illinois 61401, United States
| | - Yingying Fan
- College of Materials Science and Optoelectronic Technology & CAS Center for Excellence in Topological Quantum Computation, University of Chinese Academy of Sciences, Yanqi Lake, Huairou District, Beijing 101408, China
| | - Yongzhong Bian
- Department of Chemistry, School of Chemistry and Biological Engineering, Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials, and Daxing Research Institute, University of Science and Technology Beijing, Beijing 100083, China
| | - Jianfeng Li
- Department of Chemistry, School of Chemistry and Biological Engineering, Beijing Key Laboratory for Science and Application of Functional Molecular and Crystalline Materials, and Daxing Research Institute, University of Science and Technology Beijing, Beijing 100083, China
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16
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Hakey BM, Leary DC, Xiong J, Harris CF, Darmon JM, Petersen JL, Berry JF, Guo Y, Milsmann C. High Magnetic Anisotropy of a Square-Planar Iron-Carbene Complex. Inorg Chem 2021; 60:18575-18588. [PMID: 34431660 PMCID: PMC9106389 DOI: 10.1021/acs.inorgchem.1c01860] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Among Earth-abundant catalyst systems, iron-carbene intermediates that perform C-C bond forming reactions such as cyclopropanation of olefins and C-H functionalization via carbene insertion are rare. Detailed descriptions of the possible electronic structures for iron-carbene bonds are imperative to obtain better mechanistic insights and enable rational catalyst design. Here, we report the first square-planar iron-carbene complex (MesPDPPh)Fe(CPh2), where [MesPDPPh]2- is the doubly deprotonated form of [2,6-bis(5-(2,4,6-trimethylphenyl)-3-phenyl-1H-pyrrol-2-yl)pyridine]. The compound was prepared via reaction of the disubstituted diazoalkane N2CPh2 with (MesPDPPh)Fe(thf) and represents a rare example of a structurally characterized, paramagnetic iron-carbene complex. Temperature-dependent magnetic susceptibility measurements and applied-field Mössbauer spectroscopic studies revealed an orbitally near-degenerate S = 1 ground state with large unquenched orbital angular momentum resulting in high magnetic anisotropy. Spin-Hamiltonian analysis indicated that this S = 1 spin system has uniaxial magnetic properties arising from a ground MS = ±1 non-Kramers doublet that is well-separated from the MS = 0 sublevel due to very large axial zero-field splitting (D = -195 cm-1, E/D = 0.02 estimated from magnetic susceptibility data). This remarkable electronic structure gives rise to a very large, positive magnetic hyperfine field of more than +60 T for the 57Fe nucleus along the easy magnetization axis observed by Mössbauer spectroscopy. Computational analysis with complete active space self-consistent field (CASSCF) calculations provides a detailed electronic structure analysis and confirms that (MesPDPPh)Fe(CPh2) exhibits a multiconfigurational ground state. The majority contribution originates from a configuration best described as a singlet carbene coordinated to an intermediate-spin FeII center with a (dxy)2{(dxz),(dz2)}3(dyz)1(dx2-y2)0 configuration featuring near-degenerate dxz and dz2 orbitals.
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Affiliation(s)
- Brett M Hakey
- C. Eugene Bennett Department of Chemistry, West Virginia University, Morgantown, West Virginia 26506, United States
| | - Dylan C Leary
- C. Eugene Bennett Department of Chemistry, West Virginia University, Morgantown, West Virginia 26506, United States
| | - Jin Xiong
- Department of Chemistry, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, United States
| | - Caleb F Harris
- Department of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706, United States
| | - Jonathan M Darmon
- Department of Chemistry, Princeton University, Princeton, New Jersey 08544, United States
| | - Jeffrey L Petersen
- C. Eugene Bennett Department of Chemistry, West Virginia University, Morgantown, West Virginia 26506, United States
| | - John F Berry
- Department of Chemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706, United States
| | - Yisong Guo
- Department of Chemistry, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, United States
| | - Carsten Milsmann
- C. Eugene Bennett Department of Chemistry, West Virginia University, Morgantown, West Virginia 26506, United States
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17
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Belov DS, Tejeda G, Bukhryakov KV. Olefin Metathesis by First-Row Transition Metals. Chempluschem 2021; 86:924-937. [PMID: 34160903 DOI: 10.1002/cplu.202100192] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2021] [Revised: 06/07/2021] [Indexed: 11/06/2022]
Abstract
Catalytic olefin metathesis based on the second- and third-row transition metals has become one of the most powerful transformations in modern organic chemistry. The shift to first-row metals to produce fine and commodity chemicals would be an important achievement to complement existing methods with inexpensive and greener alternatives. In addition, those systems can offer unusual reactivity based on the unique electronic structure of the base metals. In this Minireview, we summarize the progress of the development of alkylidenes and metallacycles of first-row transition metals from scandium to nickel capable of performing cycloaddition and cycloreversion steps, crucial reactions in olefin metathesis. In addition, we will discuss systems capable of performing olefin metathesis; however, the nature of active species is not yet known.
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Affiliation(s)
- Dmitry S Belov
- Chemistry and Biochemistry, Florida International University, 11200 SW 8th St., Miami, FL, 33199, USA
| | - Gabriela Tejeda
- Chemistry and Biochemistry, Florida International University, 11200 SW 8th St., Miami, FL, 33199, USA
| | - Konstantin V Bukhryakov
- Chemistry and Biochemistry, Florida International University, 11200 SW 8th St., Miami, FL, 33199, USA
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18
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Silva LDSD, Souza AAD, Sá É. Computational considerations on the mechanism and stereoselectivity in cyclopropanation reactions via iron-carbenes. Tetrahedron Lett 2021. [DOI: 10.1016/j.tetlet.2021.153023] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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19
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Balhara R, Chatterjee R, Jindal G. A computational approach to understand the role of metals and axial ligands in artificial heme enzyme catalyzed C-H insertion. Phys Chem Chem Phys 2021; 23:9500-9511. [PMID: 33885085 DOI: 10.1039/d1cp00412c] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
Abstract
Engineered heme enzymes such as myoglobin and cytochrome P450s metalloproteins are gaining widespread importance due to their efficiency in catalyzing non-natural reactions. In a recent strategy, the naturally occurring Fe metal in the heme unit was replaced with non-native metals such as Ir, Rh, Co, Cu, etc., and axial ligands to generate artificial metalloenzymes. Determining the best metal-ligand for a chemical transformation is not a trivial task. Here we demonstrate how computational approaches can be used in deciding the best metal-ligand combination which would be highly beneficial in designing new enzymes as well as small molecule catalysts. We have used Density Functional Theory (DFT) to shed light on the enhanced reactivity of an Ir system with varying axial ligands. We look at the insertion of a carbene group generated from diazo precursors via N2 extrusion into a C-H bond. For both Ir(Me) and Fe systems, the first step, i.e., N2 extrusion is the rate determining step. Strikingly, neither the better ligand overlap with 5d orbitals on Ir nor the electrophilicity on the carbene centre play a significant role. A comparison of Fe and Ir systems reveals that a lower distortion in the Ir(Me)-porphyrin on moving from the reactant to the transition state renders it catalytically more active. We notice that for both metal porphyrins, the free energy barriers are affected by axial ligand substitution. Further, for Fe porphyrin, the axial ligand also changes the preferred spin state. We show that for the carbene insertion into the C-H bond, Fe porphyrin systems undergo a stepwise HAT (hydrogen atom transfer) instead of a concerted hydride transfer process. Importantly, we find that the substitution of the axial Me ligand on Ir to imidazole or chloride, or without an axial substitution changes the rate determining step of the reaction. Therefore, an optimum ligand that can balance the barriers for both steps of the catalytic cycle is essential. We subsequently used the QM cluster approach to delineate the protein environment's role and mutations in improving the catalytic activity of the Ir(Me) system.
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Affiliation(s)
- Reena Balhara
- Department of Organic Chemistry, Indian Institute of Science, Bangalore 560012, India.
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20
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Hoffbauer MR, Iluc VM. [2+2] Cycloadditions with an Iron Carbene: A Critical Step in Enyne Metathesis. J Am Chem Soc 2021; 143:5592-5597. [DOI: 10.1021/jacs.0c12175] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Melissa R. Hoffbauer
- Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556, United States
| | - Vlad M. Iluc
- Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556, United States
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21
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Álvarez M, Besora M, Molina F, Maseras F, Belderrain TR, Pérez PJ. Two Copper-Carbenes from One Diazo Compound. J Am Chem Soc 2021; 143:4837-4843. [PMID: 33733762 PMCID: PMC8603358 DOI: 10.1021/jacs.1c01483] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Abstract
Many transition-metal complexes MLn decompose diazo compounds N2═CR1R2 generating metal-carbenes LnM═CR1R2 which transfer the carbene group to other substrates, constituting an important tool in organic synthesis. All previous reports have shown that the CR1R2 fragment at the metal-carbene remains intact from the parent diazo compound. Herein we report the detection and isolation of a monosubstituted copper carbene where the CR1R2 ligand has undergone a modification from the initial diazo reagent. When TpMsCu(THF) (TpMs = hydrotris(3-mesityl)pyrazolylborate ligand) was reacted with N,N-diethyl diazoacetamide [N2═C(H)(CONEt2)], the stable copper carbene TpMsCu═C(H)(NEt2) was isolated, resulting from a decarbonylation process, with carbon monoxide being trapped as TpMsCu(CO). The simultaneous observation of products derived from the intramolecular carbene insertion reaction into C-H bonds demonstrates that the expected TpMsCu═C(H)(CONEt2) complex is also formed. Experimental data, DFT calculations, and microkinetic models allow us to propose that the latter undergoes CO loss en route to the former.
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Affiliation(s)
- María Álvarez
- Laboratorio de Catálisis Homogénea, Unidad Asociada al CSIC, CIQSO-Centro de Investigación en Química Sostenible and Departamento de Química, Universidad de Huelva, 21007 Huelva, Spain
| | - Maria Besora
- Institute of Chemical Research of Catalonia, ICIQ, Av. Països Catalans, 16, Barcelona Institut of Science and Technology, 43007 Tarragona, Spain.,Departament de Química Física i Inorgànica, Universitat Rovira i Virgili, 43007 Tarragona, Spain
| | - Francisco Molina
- Laboratorio de Catálisis Homogénea, Unidad Asociada al CSIC, CIQSO-Centro de Investigación en Química Sostenible and Departamento de Química, Universidad de Huelva, 21007 Huelva, Spain
| | - Feliu Maseras
- Institute of Chemical Research of Catalonia, ICIQ, Av. Països Catalans, 16, Barcelona Institut of Science and Technology, 43007 Tarragona, Spain.,Departament de Química, Universitat Autònoma de Barcelona, 08193 Bellaterra, Spain
| | - Tomás R Belderrain
- Laboratorio de Catálisis Homogénea, Unidad Asociada al CSIC, CIQSO-Centro de Investigación en Química Sostenible and Departamento de Química, Universidad de Huelva, 21007 Huelva, Spain
| | - Pedro J Pérez
- Laboratorio de Catálisis Homogénea, Unidad Asociada al CSIC, CIQSO-Centro de Investigación en Química Sostenible and Departamento de Química, Universidad de Huelva, 21007 Huelva, Spain
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22
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Bergstrom BD, Nickerson LA, Shaw JT, Souza LW. Transition Metal Catalyzed Insertion Reactions with Donor/Donor Carbenes. Angew Chem Int Ed Engl 2021; 60:6864-6878. [PMID: 32770624 PMCID: PMC7867669 DOI: 10.1002/anie.202007001] [Citation(s) in RCA: 92] [Impact Index Per Article: 23.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2020] [Revised: 07/17/2020] [Indexed: 12/15/2022]
Abstract
Donor/donor carbenes are relatively new in the field of carbene chemistry; although applications in C-H and X-H insertion reactions are few in number, they demonstrate exquisite chemo- and stereo-selectivity. Recent reports have shown that C-H, N-H, B-H, O-H, S-H, Si-H, Ge-H, Sn-H and P-H insertion reactions are feasible with a variety of transition metal catalysts, both inter- and intramolecularly. Furthermore, high degrees of diastereo- and enantioselectivity have been observed in several cases. Methods typically involve the formation of a diazo-based carbene precursor, but procedures using diazo-free metal carbenes have been developed with significant success. This Minireview covers transition-metal catalyzed insertion reactions with donor/donor and donor carbenes, providing context for future developments in this emerging field.
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Affiliation(s)
- Benjamin D Bergstrom
- Department of Chemistry, University of California, Davis, One Shields Ave., Davis, CA, 95616, USA
| | - Leslie A Nickerson
- Department of Chemistry, University of California, Davis, One Shields Ave., Davis, CA, 95616, USA
| | - Jared T Shaw
- Department of Chemistry, University of California, Davis, One Shields Ave., Davis, CA, 95616, USA
| | - Lucas W Souza
- Department of Chemistry, University of California, Davis, One Shields Ave., Davis, CA, 95616, USA
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23
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Longevial J, Rose C, Poyac L, Clément S, Richeter S. Molecular Systems Combining Porphyrinoids and N‐Heterocyclic Carbenes. Eur J Inorg Chem 2021. [DOI: 10.1002/ejic.202001011] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
| | - Clémence Rose
- ICGM Univ. Montpellier CNRS ENSCM 34000 Montpellier France
| | - Ludivine Poyac
- ICGM Univ. Montpellier CNRS ENSCM 34000 Montpellier France
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24
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Yang Y, Arnold FH. Navigating the Unnatural Reaction Space: Directed Evolution of Heme Proteins for Selective Carbene and Nitrene Transfer. Acc Chem Res 2021; 54:1209-1225. [PMID: 33491448 PMCID: PMC7931446 DOI: 10.1021/acs.accounts.0c00591] [Citation(s) in RCA: 127] [Impact Index Per Article: 31.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
![]()
Despite the astonishing diversity of naturally
occurring biocatalytic
processes, enzymes do not catalyze many of the transformations favored
by synthetic chemists. Either nature does not care about the specific
products, or if she does, she has adopted a different synthetic strategy.
In many cases, the appropriate reagents used by synthetic chemists
are not readily accessible to biological systems. Here, we discuss
our efforts to expand the catalytic repertoire of enzymes to encompass
powerful reactions previously known only in small-molecule catalysis:
formation and transfer of reactive carbene and nitrene intermediates
leading to a broad range of products, including products with bonds
not known in biology. In light of the structural similarity of iron
carbene (Fe=C(R1)(R2)) and iron nitrene
(Fe=NR) to the iron oxo (Fe=O) intermediate involved
in cytochrome P450-catalyzed oxidation, we have used synthetic carbene
and nitrene precursors that biological systems have not encountered
and repurposed P450s to catalyze reactions that are not known in the
natural world. The resulting protein catalysts are fully genetically
encoded and function in intact microbial cells or cell-free lysates,
where their performance can be improved and optimized by directed
evolution. By leveraging the catalytic promiscuity of P450 enzymes,
we evolved a range of carbene and nitrene transferases exhibiting
excellent activity toward these new-to-nature reactions. Since our
initial report in 2012, a number of other heme proteins including
myoglobins, protoglobins, and cytochromes c have
also been found and engineered to promote unnatural carbene and nitrene
transfer. Due to the altered active-site environments, these heme
proteins often displayed complementary activities and selectivities
to P450s. Using wild-type and engineered heme proteins, we and
others have
described a range of selective carbene transfer reactions, including
cyclopropanation, cyclopropenation, Si–H insertion, B–H
insertion, and C–H insertion. Similarly, a variety of asymmetric
nitrene transfer processes including aziridination, sulfide imidation,
C–H amidation, and, most recently, C–H amination have
been demonstrated. The scopes of these biocatalytic carbene and nitrene
transfer reactions are often complementary to the state-of-the-art
processes based on small-molecule transition-metal catalysts, making
engineered biocatalysts a valuable addition to the synthetic chemist’s
toolbox. Moreover, enabled by the exquisite regio- and stereocontrol
imposed by the enzyme catalyst, this biocatalytic platform provides
an exciting opportunity to address challenging problems in modern
synthetic chemistry and selective catalysis, including ones that have
eluded synthetic chemists for decades.
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Affiliation(s)
- Yang Yang
- Division of Chemistry and Chemical Engineering, California Institute of Technology, 210-41, 1200 East California Boulevard, Pasadena, California 91125, United States
| | - Frances H. Arnold
- Division of Chemistry and Chemical Engineering, California Institute of Technology, 210-41, 1200 East California Boulevard, Pasadena, California 91125, United States
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25
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Cailler LP, Kroitor AP, Martynov AG, Gorbunova YG, Sorokin AB. Selective carbene transfer to amines and olefins catalyzed by ruthenium phthalocyanine complexes with donor substituents. Dalton Trans 2021; 50:2023-2031. [PMID: 33443525 DOI: 10.1039/d0dt04090h] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Electron-rich ruthenium phthalocyanine complexes were evaluated in carbene transfer reactions from ethyl diazoacetate (EDA) to aromatic and aliphatic olefins as well as to a wide range of aromatic, heterocyclic and aliphatic amines for the first time. It was revealed that the ruthenium octabutoxyphthalocyanine carbonyl complex [(BuO)8Pc]Ru(CO) is the most efficient catalyst converting electron-rich and electron-poor aromatic olefins to cyclopropane derivatives with high yields (typically 80-100%) and high TON (up to 1000) under low catalyst loading and nearly equimolar substrate/EDA ratio. This catalyst shows a rare efficiency in the carbene insertion into amine N-H bonds. Using a 0.05 mol% catalyst loading, a high amine concentration (1 M) and 1.1 eq. of EDA, a number of structurally divergent amines were selectively converted to mono-substituted glycine derivatives with up to quantitative yields and turnover numbers reaching 2000. High selectivity, large substrate scope, low catalyst loading and practical reaction conditions place [(BuO)8Pc]Ru(CO) among the most efficient catalysts for the carbene insertion into amines.
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Affiliation(s)
- Lucie P Cailler
- Univ. Lyon, Université Claude Bernard Lyon 1, CNRS, IRCELYON, 2 av. A. Einstein, 69626 Villeurbanne, France.
| | - Andrey P Kroitor
- A. N. Frumkin Institute of Physical Chemistry and Electrochemistry, Russian Academy of Sciences, Leniskii pr., 31, bldg. 4, 119071 Moscow, Russia.
| | - Alexander G Martynov
- A. N. Frumkin Institute of Physical Chemistry and Electrochemistry, Russian Academy of Sciences, Leniskii pr., 31, bldg. 4, 119071 Moscow, Russia.
| | - Yulia G Gorbunova
- A. N. Frumkin Institute of Physical Chemistry and Electrochemistry, Russian Academy of Sciences, Leniskii pr., 31, bldg. 4, 119071 Moscow, Russia. and N. S. Kurnakov Institute of General and Inorganic Chemistry, Russian Academy of Sciences, Leniskii pr., 31, 11991 Moscow, Russia.
| | - Alexander B Sorokin
- Univ. Lyon, Université Claude Bernard Lyon 1, CNRS, IRCELYON, 2 av. A. Einstein, 69626 Villeurbanne, France.
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26
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Maity AK, Kalb AE, Zeller M, Uyeda C. A Dinickel Catalyzed Cyclopropanation without the Formation of a Metal Carbene Intermediate. Angew Chem Int Ed Engl 2021; 60:1897-1902. [PMID: 33045127 PMCID: PMC8086810 DOI: 10.1002/anie.202011602] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2020] [Indexed: 11/09/2022]
Abstract
(NDI)Ni2 catalysts (NDI=naphthyridine-diimine) promote cyclopropanation reactions of 1,3-dienes using (Me3 Si)CHN2 . Mechanistic studies reveal that a metal carbene intermediate is not part of the catalytic cycle. The (NDI)Ni2 (CHSiMe3 ) complex was independently synthesized and found to be unreactive toward dienes. Based on DFT models, we propose an alternative mechanism that begins with a Ni2 -mediated coupling of (Me3 Si)CHN2 and the diene. N2 extrusion followed by radical C-C bond formation generates the cyclopropane product. This model reproduces the experimentally observed regioselectivity and diastereoselectivity of the reaction.
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Affiliation(s)
- Arnab K. Maity
- Department of Chemistry, Purdue University, 560 Oval Dr., West Lafayette, IN 47907 (USA)
| | - Annah E. Kalb
- Department of Chemistry, Purdue University, 560 Oval Dr., West Lafayette, IN 47907 (USA)
| | - Matthias Zeller
- Department of Chemistry, Purdue University, 560 Oval Dr., West Lafayette, IN 47907 (USA)
| | - Christopher Uyeda
- Department of Chemistry, Purdue University, 560 Oval Dr., West Lafayette, IN 47907 (USA)
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27
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Maity AK, Kalb AE, Zeller M, Uyeda C. A Dinickel Catalyzed Cyclopropanation without the Formation of a Metal Carbene Intermediate. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202011602] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Arnab K. Maity
- Department of Chemistry Purdue University 560 Oval Dr. West Lafayette IN 47907 USA
| | - Annah E. Kalb
- Department of Chemistry Purdue University 560 Oval Dr. West Lafayette IN 47907 USA
| | - Matthias Zeller
- Department of Chemistry Purdue University 560 Oval Dr. West Lafayette IN 47907 USA
| | - Christopher Uyeda
- Department of Chemistry Purdue University 560 Oval Dr. West Lafayette IN 47907 USA
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28
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Bergstrom BD, Nickerson LA, Shaw JT, Souza LW. Transition Metal Catalyzed Insertion Reactions with Donor/Donor Carbenes. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202007001] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
- Benjamin D. Bergstrom
- Department of Chemistry University of California, Davis One Shields Ave. Davis CA 95616 USA
| | - Leslie A. Nickerson
- Department of Chemistry University of California, Davis One Shields Ave. Davis CA 95616 USA
| | - Jared T. Shaw
- Department of Chemistry University of California, Davis One Shields Ave. Davis CA 95616 USA
| | - Lucas W. Souza
- Department of Chemistry University of California, Davis One Shields Ave. Davis CA 95616 USA
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29
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Rodríguez M, Font G, Nadal‐Moradell J, Hernán‐Gómez A, Costas M. Iron‐Catalyzed Intermolecular Functionalization of Non‐Activated Aliphatic C−H Bonds
via
Carbene Transfer. Adv Synth Catal 2020. [DOI: 10.1002/adsc.202000817] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Mònica Rodríguez
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química Universitat de Girona Campus de Montilivi 17071 Girona Spain
| | - Gemma Font
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química Universitat de Girona Campus de Montilivi 17071 Girona Spain
| | - Joel Nadal‐Moradell
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química Universitat de Girona Campus de Montilivi 17071 Girona Spain
| | - Alberto Hernán‐Gómez
- Departamento de Química Orgánica y Química Inorgánica Universidad de Alcalá 28805 Alcalá de Henares-Madrid Spain
| | - Miquel Costas
- Institut de Química Computacional i Catàlisi (IQCC) and Departament de Química Universitat de Girona Campus de Montilivi 17071 Girona Spain
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30
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Casali E, Gallo E, Toma L. An In-Depth Computational Study of Alkene Cyclopropanation Catalyzed by Fe(porphyrin)(OCH 3) Complexes. The Environmental Effects on the Energy Barriers. Inorg Chem 2020; 59:11329-11336. [PMID: 32799510 PMCID: PMC8009515 DOI: 10.1021/acs.inorgchem.0c00912] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Iron porphyrin methoxy complexes, of the general formula [Fe(porphyrin)(OCH3)], are able to catalyze the reaction of diazo compounds with alkenes to give cyclopropane products with very high efficiency and selectivity. The overall mechanism of these reactions was thoroughly investigated with the aid of a computational approach based on density functional theory calculations. The energy profile for the processes catalyzed by the oxidized [FeIII(Por)(OCH3)] (Por = porphine) as well as the reduced [FeII(Por)(OCH3)]- forms of the iron porphyrin was determined. The main reaction step is the same in both of the cases, that is, the one leading to the terminal-carbene intermediate [Fe(Por)(OCH3)(CHCO2Et)] with simultaneous dinitrogen loss; however, the reduced species performs much better than the oxidized one. Contrarily to the iron(III) profile in which the carbene intermediate is directly obtained from the starting reactant complex, the favored iron(II) process is more intricate. The initially formed reactant adduct between [FeII(Por)(OCH3)]- and ethyl diazoacetate (EDA) is converted into a closer reactant adduct, which is in turn converted into the terminal iron porphyrin carbene [Fe(Por)(OCH3)(CHCO2Et)]-. The two corresponding transition states are almost isoenergetic, thus raising the question of whether the rate-determining step corresponds to dinitrogen loss or to the previous structural and electronic rearrangement. The ethylene addition to the terminal carbene is a downhill process, which, on the open-shell singlet surface, presents a defined but probably short-living diradicaloid intermediate, though other spin-state surfaces do not show this intermediate allowing a direct access to the cyclopropane product. For the crucial stationary points, the more complex catalyst [Fe(2)(OCH3)], in which a sterically hindered chiral bulk is mounted onto the porphyrin, was investigated. The corresponding computational data disclose the very significant effect of the porphyrin skeleton on the reaction energy profile. Though the geometrical features around the reactive core of the system remain unchanged, the energy barriers become much lower, thus revealing the profound effects that can be exerted by the three-dimensional organic scaffold surrounding the reaction site.
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Affiliation(s)
- Emanuele Casali
- Dipartimento di Chimica, Università di Pavia, Via Taramelli 12, 27100 Pavia, Italy
| | - Emma Gallo
- Dipartimento di Chimica, Università di Milano, Via Golgi 19, 20133 Milano, Italy
| | - Lucio Toma
- Dipartimento di Chimica, Università di Pavia, Via Taramelli 12, 27100 Pavia, Italy
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31
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Affiliation(s)
- Vasco F. Batista
- LAQV-REQUIMTE and Department of Chemistry, University of Aveiro, Campus de Santiago, 3810-193, Aveiro, Portugal
| | - Diana C. G. A. Pinto
- LAQV-REQUIMTE and Department of Chemistry, University of Aveiro, Campus de Santiago, 3810-193, Aveiro, Portugal
| | - Artur M. S. Silva
- LAQV-REQUIMTE and Department of Chemistry, University of Aveiro, Campus de Santiago, 3810-193, Aveiro, Portugal
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32
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Stroscio GD, Srnec M, Hadt RG. Multireference Ground and Excited State Electronic Structures of Free- versus Iron Porphyrin-Carbenes. Inorg Chem 2020; 59:8707-8715. [PMID: 32510941 DOI: 10.1021/acs.inorgchem.0c00249] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Iron porphyrin carbenes (IPCs) are important reaction intermediates in engineered carbene transferase enzymes and homogeneous catalysis. However, discrepancies between theory and experiment complicate the understanding of IPC electronic structure. In the literature, this has been framed as whether the ground state is an open- vs closed-shell singlet (OSS vs CSS). Here we investigate the structurally dependent ground and excited spin-state energetics of a free carbene and its IPC analogs with variable trans axial ligands. In particular, for IPCs, multireference ab initio wave function methods are more consistent with experiment and predict a mixed singlet ground state that is dominated by the CSS (Fe(II) ← {:C(X)Y}0) configuration (i.e., electrophilic carbene) but that also has a small, non-negligible contribution from an Fe(III)-{C(X)Y}-• configuration (hole in d(xz), i.e., radical carbene). In the multireference approach, the "OSS-like" excited states are metal-to-ligand charge transfer (MLCT) in nature and are energetically well above the CSS-dominated ground state. The first, lowest energy of these "OSS-like" excited states is predicted to be heavily weighted toward the Fe(III)-{C(X)Y}-• (hole in d(yz)) configuration. As expected from exchange considerations, this state falls energetically above a triplet of the same configuration. Furthermore, potential energy surfaces (PESs) along the IPC Fe-C(carbene) bond elongation exhibit increasingly strong mixings between CSS/OSS characters, with the Fe(III)-{C(X)Y}-• configuration (hole in d(xz)) growing in weight in the ground state during bond elongation. The relative degree of electrophilic/radical carbene character along this structurally relevant PES can potentially play a role in reactivity and selectivity patterns in catalysis. Future studies on IPC reaction coordinates should evaluate contributions from ground and excited state multireference character.
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Affiliation(s)
- Gautam D Stroscio
- Division of Chemistry and Chemical Engineering, Arthur Amos Noyes Laboratory of Chemical Physics, California Institute of Technology, Pasadena, California 91125, United States
| | - Martin Srnec
- J. Heyrovský Institute of Physical Chemistry, Czech Academy of Sciences, Prague 8, 18223 Czech Republic
| | - Ryan G Hadt
- Division of Chemistry and Chemical Engineering, Arthur Amos Noyes Laboratory of Chemical Physics, California Institute of Technology, Pasadena, California 91125, United States
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33
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George GM, Wolczanski PT, MacMillan SN, Cundari TR. Unrealized concepts of masked alkylidenes in (PNP)FeXY systems and alternative approaches to LnXmFe(IV)=CHR. Polyhedron 2020. [DOI: 10.1016/j.poly.2020.114460] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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34
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Yan X, Li C, Xu X, Zhao X, Pan Y. Hemin Catalyzed Dealkylative Intercepted [2, 3]‐Sigmatropic Rearrangement Reactions of Sulfonium Ylides with 2, 2, 2‐Trifluorodiazoethane. Adv Synth Catal 2020. [DOI: 10.1002/adsc.201901534] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Xiaojing Yan
- Department of ChemistryZhejiang University Zheda Road 38 Hangzhou 310027 People's Republic of China
| | - Chang Li
- Zhejiang Chinese Medical University Bingwen Road 548 Hangzhou 310053 People's Republic of China
| | - Xiaofei Xu
- Department of ChemistryZhejiang University Zheda Road 38 Hangzhou 310027 People's Republic of China
| | - Xiaoyong Zhao
- Department of ChemistryZhejiang University Zheda Road 38 Hangzhou 310027 People's Republic of China
| | - Yuanjiang Pan
- Department of ChemistryZhejiang University Zheda Road 38 Hangzhou 310027 People's Republic of China
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35
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Li J, Zhang D, Chen J, Ma C, Hu W. Enantioselective Synthesis of Fluoroalkyl-Substituted syn-Diamines by the Asymmetric gem-Difunctionalization of 2,2,2-Trifluorodiazoethane. ACS Catal 2020. [DOI: 10.1021/acscatal.0c00972] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Jiuling Li
- Guangdong Key Laboratory of Chiral Molecule and Drug Discovery, School of Pharmaceutical Sciences, Sun Yat-sen University, Guangzhou 510006, China
- School Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, China
| | - Dan Zhang
- Guangdong Key Laboratory of Chiral Molecule and Drug Discovery, School of Pharmaceutical Sciences, Sun Yat-sen University, Guangzhou 510006, China
| | - Jianghui Chen
- School Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, China
| | - Chaoqun Ma
- School Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, China
| | - Wenhao Hu
- Guangdong Key Laboratory of Chiral Molecule and Drug Discovery, School of Pharmaceutical Sciences, Sun Yat-sen University, Guangzhou 510006, China
- School Shanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, China
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36
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Zhu D, Chen L, Fan H, Yao Q, Zhu S. Recent progress on donor and donor-donor carbenes. Chem Soc Rev 2020; 49:908-950. [PMID: 31958107 DOI: 10.1039/c9cs00542k] [Citation(s) in RCA: 234] [Impact Index Per Article: 46.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
Donor and donor-donor carbenes are two important kinds of carbenes, which have experienced tremendous growth in the past two decades. This review provides a comprehensive overview of the recent development of donor and donor-donor carbene chemistry. The development of this chemistry offers efficient protocols to construct a wide variety of C-C and C-X bonds in organic synthesis. This review is organized based on the different types of carbene precursors, including diazo compounds, hydrazones, enynones, cycloheptatrienes and cyclopropenes. The typical transformations, the reaction mechanisms, as well as their subsequent applications in the synthesis of complex natural products and bioactive molecules are discussed. Due to the rapidly increasing interest in this area, we believe that this review will provide a timely and comprehensive discussion of recent progress in donor and donor-donor carbene chemistry.
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Affiliation(s)
- Dong Zhu
- Key Laboratory of Functional Molecular Engineering of Guangdong Province, School of Chemistry and Chemical Engineering, South China University of Technology, Guangzhou, 510640, P. R. China.
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37
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Wang HX, Wan Q, Low KH, Zhou CY, Huang JS, Zhang JL, Che CM. Stable group 8 metal porphyrin mono- and bis(dialkylcarbene) complexes: synthesis, characterization, and catalytic activity. Chem Sci 2020; 11:2243-2259. [PMID: 32180931 PMCID: PMC7047983 DOI: 10.1039/c9sc05432d] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2019] [Accepted: 12/30/2019] [Indexed: 12/17/2022] Open
Abstract
Alkyl-substituted carbene (CHR or CR2, R = alkyl) complexes have been extensively studied for alkylcarbene (CHR) ligands coordinated with high-valent early transition metal ions (a.k.a. Schrock carbenes or alkylidenes), yet dialkylcarbene (CR2) complexes remain less developed with bis(dialkylcarbene) species being little (if at all) explored. Herein, several group 8 metal porphyrin dialkylcarbene complexes, including Fe- and Ru-mono(dialkylcarbene) complexes [M(Por)(Ad)] (1a,b, M = Fe, Por = porphyrinato dianion, Ad = 2-adamantylidene; 2a,b, M = Ru) and Os-bis(dialkylcarbene) complexes [Os(Por)(Ad)2] (3a-c), are synthesized and crystallographically characterized. Detailed investigations into their electronic structures reveal that these complexes are formally low-valent M(ii)-carbene in nature. These complexes display remarkable thermal stability and chemical inertness, which are rationalized by a synergistic effect of strong metal-carbene covalency, hyperconjugation, and a rigid diamondoid carbene skeleton. Various spectroscopic techniques and DFT calculations suggest that the dialkylcarbene Ad ligand is unique compared to other common carbene ligands as it acts as both a potent σ-donor and π-acceptor; its unique electronic and structural features, together with the steric effect of the porphyrin macrocycle, make its Fe porphyrin complex 1a an active and robust catalyst for intermolecular diarylcarbene transfer reactions including cyclopropanation (up to 90% yield) and X-H (X = S, N, O, C) insertion (up to 99% yield) reactions.
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Affiliation(s)
- Hai-Xu Wang
- State Key Laboratory of Synthetic Chemistry , Department of Chemistry , The University of Hong Kong , Pokfulam Road , Hong Kong SAR , China .
| | - Qingyun Wan
- State Key Laboratory of Synthetic Chemistry , Department of Chemistry , The University of Hong Kong , Pokfulam Road , Hong Kong SAR , China .
| | - Kam-Hung Low
- State Key Laboratory of Synthetic Chemistry , Department of Chemistry , The University of Hong Kong , Pokfulam Road , Hong Kong SAR , China .
| | - Cong-Ying Zhou
- State Key Laboratory of Synthetic Chemistry , Department of Chemistry , The University of Hong Kong , Pokfulam Road , Hong Kong SAR , China .
- College of Chemistry and Materials Science , Jinan University , Guangzhou , China
| | - Jie-Sheng Huang
- State Key Laboratory of Synthetic Chemistry , Department of Chemistry , The University of Hong Kong , Pokfulam Road , Hong Kong SAR , China .
| | - Jun-Long Zhang
- Beijing National Laboratory for Molecular Sciences , College of Chemistry and Molecular Engineering , Peking University , Beijing , China
| | - Chi-Ming Che
- State Key Laboratory of Synthetic Chemistry , Department of Chemistry , The University of Hong Kong , Pokfulam Road , Hong Kong SAR , China .
- HKU Shenzhen Institute of Research & Innovation , Shenzhen , China
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38
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DeJesus JF, Jenkins DM. A Chiral Macrocyclic Tetra-N-Heterocyclic Carbene Yields an "All Carbene" Iron Alkylidene Complex. Chemistry 2020; 26:1429-1435. [PMID: 31788868 PMCID: PMC7024548 DOI: 10.1002/chem.201905360] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2019] [Indexed: 01/12/2023]
Abstract
The first chiral macrocyclic tetra-N-heterocyclic carbene (NHC) ligand has been synthesized. The macrocycle, prepared in high yield and large scale, was ligated onto palladium and iron to give divalent C2 -symmetric square planar complexes. Multinuclear NMR and single crystal X-ray diffraction demonstrated that there are two distinct NHCs on each ligand, due to the bridging chiral cyclohexane. Oxidation of the iron(II) complex with trimethylamine N-oxide yielded a bridging oxo complex. Diazodiphenylmethane reacted with the iron(II) complex at room temperature to give a paramagnetic diazoalkane complex; the same reaction yielded the "all carbene" complex at elevated temperature. Electrochemical measurements support the assignment of the "all carbene" complex being an alkylidene. Notably, the diazoalkane complex can be directly transformed into the alkylidene complex, which had not been previously demonstrated on iron. Finally, a test catalytic reaction with a diazoalkane on the iron(II) complex does not yield the expected cyclopropane, but actually the azine compound.
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Affiliation(s)
- Joseph F DeJesus
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee, 37996, USA
| | - David M Jenkins
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee, 37996, USA
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39
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Ahadi E, Hosseini-Monfared H, Spieß A, Janiak C. Photocatalytic asymmetric epoxidation of trans-stilbene with manganese–porphyrin/graphene-oxide nanocomposite and molecular oxygen: axial ligand effect. Catal Sci Technol 2020. [DOI: 10.1039/d0cy00441c] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
An efficient, visible light-driven manganese–porphyrin photocatalyst was developed for the asymmetric epoxidation of trans-stilbene by molecular oxygen under mild conditions.
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Affiliation(s)
- Elahe Ahadi
- Department of Chemistry
- University of Zanjan
- Zanjan
- Iran
| | | | - Alex Spieß
- Institut für Anorganische Chemie und Strukturchemie
- Heinrich-Heine-Universität Düsseldorf
- 40204 Düsseldorf
- Germany
| | - Christoph Janiak
- Institut für Anorganische Chemie und Strukturchemie
- Heinrich-Heine-Universität Düsseldorf
- 40204 Düsseldorf
- Germany
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40
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Manna D, Lo R, Hobza P. Spin modification of iron(ii) complexes via covalent (dative) and dispersion guided non-covalent bonding with N-heterocyclic carbenes: DFT, DLPNO-CCSD(T) and MCSCF studies. Dalton Trans 2020; 49:164-170. [DOI: 10.1039/c9dt04334a] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Spin crossover from high spin Fe(ii)-phthalocyanine to low or intermediate spin via either dative covalent or non-covalent interaction by just varying the substituent using the same core ligand.
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Affiliation(s)
- Debashree Manna
- Institute of Organic Chemistry and Biochemistry
- Academy of Sciences of the Czech Republic
- 16610 Prague 6
- Czech Republic
- Regional Centre of Advanced Technologies and Materials
| | - Rabindranath Lo
- Institute of Organic Chemistry and Biochemistry
- Academy of Sciences of the Czech Republic
- 16610 Prague 6
- Czech Republic
- Regional Centre of Advanced Technologies and Materials
| | - Pavel Hobza
- Institute of Organic Chemistry and Biochemistry
- Academy of Sciences of the Czech Republic
- 16610 Prague 6
- Czech Republic
- Regional Centre of Advanced Technologies and Materials
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41
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Damiano C, Sonzini P, Gallo E. Iron catalysts with N-ligands for carbene transfer of diazo reagents. Chem Soc Rev 2020; 49:4867-4905. [DOI: 10.1039/d0cs00221f] [Citation(s) in RCA: 44] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
This review provides an overview of the catalytic activity of iron complexes of nitrogen ligands in driving carbene transfers towards CC, C–H and X–H bonds. The reactivity of diazo reagents is discussed as well as the proposed reaction mechanisms.
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Affiliation(s)
| | - Paolo Sonzini
- Department of Chemistry
- University of Milan
- 20133 Milan
- Italy
| | - Emma Gallo
- Department of Chemistry
- University of Milan
- 20133 Milan
- Italy
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42
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Liu Y, You T, Wang HX, Tang Z, Zhou CY, Che CM. Iron- and cobalt-catalyzed C(sp3)–H bond functionalization reactions and their application in organic synthesis. Chem Soc Rev 2020; 49:5310-5358. [DOI: 10.1039/d0cs00340a] [Citation(s) in RCA: 62] [Impact Index Per Article: 12.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
This review highlights the developments in iron and cobalt catalyzed C(sp3)–H bond functionalization reactions with emphasis on their applications in organic synthesis, i.e. natural products and pharmaceuticals synthesis and/or modification.
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Affiliation(s)
- Yungen Liu
- Department of Chemistry
- Southern University of Science and Technology
- Shenzhen
- P. R. China
| | - Tingjie You
- Department of Chemistry
- State Key Laboratory of Synthetic Chemistry
- The University of Hong Kong
- Hong Kong
- P. R. China
| | - Hai-Xu Wang
- Department of Chemistry
- State Key Laboratory of Synthetic Chemistry
- The University of Hong Kong
- Hong Kong
- P. R. China
| | - Zhou Tang
- Department of Chemistry
- State Key Laboratory of Synthetic Chemistry
- The University of Hong Kong
- Hong Kong
- P. R. China
| | - Cong-Ying Zhou
- Department of Chemistry
- State Key Laboratory of Synthetic Chemistry
- The University of Hong Kong
- Hong Kong
- P. R. China
| | - Chi-Ming Che
- Department of Chemistry
- Southern University of Science and Technology
- Shenzhen
- P. R. China
- Department of Chemistry
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43
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Cailler LP, Clémancey M, Barilone J, Maldivi P, Latour JM, Sorokin AB. Comparative Study of the Electronic Structures of μ-Oxo, μ-Nitrido, and μ-Carbido Diiron Octapropylporphyrazine Complexes and Their Catalytic Activity in Cyclopropanation of Olefins. Inorg Chem 2019; 59:1104-1116. [DOI: 10.1021/acs.inorgchem.9b02718] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Lucie P. Cailler
- Institut de Recherches sur la Catalyse et l’Environnement de Lyon IRCELYON, UMR 5256, CNRS - Université Lyon 1, 2 avenue A. Einstein, 69626 Villeurbanne cedex, France
| | - Martin Clémancey
- Univ. Grenoble-Alpes, CEA, CNRS, IRIG-SyMMES, Grenoble 38000, France
| | - Jessica Barilone
- Univ. Grenoble-Alpes, CEA, CNRS, IRIG, CBM, Grenoble 38000, France
- Univ. Grenoble-Alpes, CEA, CNRS, IRIG-SyMMES, Grenoble 38000, France
| | - Pascale Maldivi
- Univ. Grenoble-Alpes, CEA, CNRS, IRIG, CBM, Grenoble 38000, France
| | - Jean-Marc Latour
- Univ. Grenoble-Alpes, CEA, CNRS, IRIG-SyMMES, Grenoble 38000, France
| | - Alexander B. Sorokin
- Institut de Recherches sur la Catalyse et l’Environnement de Lyon IRCELYON, UMR 5256, CNRS - Université Lyon 1, 2 avenue A. Einstein, 69626 Villeurbanne cedex, France
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44
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Picher MI, Plietker B. Fe-Catalyzed Selective Cyclopropanation of Enynes under Photochemical or Thermal Conditions. Org Lett 2019; 22:340-344. [DOI: 10.1021/acs.orglett.9b04521] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Marie-Idrissa Picher
- Institut für Organische Chemie, Universität Stuttgart, Pfaffenwaldring 55, DE-70569 Stuttgart, Germany
| | - Bernd Plietker
- Institut für Organische Chemie, Universität Stuttgart, Pfaffenwaldring 55, DE-70569 Stuttgart, Germany
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45
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Li F, Tang X, Xu Y, Wang C, Zhang L, Zhang J, Liu J, Li Z, Wang L. Hemoglobin-Catalyzed Synthesis of Indolizines Under Mild Conditions. European J Org Chem 2019. [DOI: 10.1002/ejoc.201901591] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Affiliation(s)
- Fengxi Li
- Key Laboratory of Molecular Enzymology and Engineering of Ministry of Education School of Life Sciences; Jilin University; 130023 Changchun P. R. China
| | - Xuyong Tang
- Key Laboratory of Molecular Enzymology and Engineering of Ministry of Education School of Life Sciences; Jilin University; 130023 Changchun P. R. China
| | - Yaning Xu
- Key Laboratory of Molecular Enzymology and Engineering of Ministry of Education School of Life Sciences; Jilin University; 130023 Changchun P. R. China
| | - Chunyu Wang
- State Key Laboratory of Supramolecular Structure and Materials; Jilin University; 130023 Changchun P. R. China
| | - Liu Zhang
- Key Laboratory of Molecular Enzymology and Engineering of Ministry of Education School of Life Sciences; Jilin University; 130023 Changchun P. R. China
| | - Jiaxin Zhang
- Key Laboratory of Molecular Enzymology and Engineering of Ministry of Education School of Life Sciences; Jilin University; 130023 Changchun P. R. China
| | - Jiaxu Liu
- Key Laboratory of Molecular Enzymology and Engineering of Ministry of Education School of Life Sciences; Jilin University; 130023 Changchun P. R. China
| | - Zhengqiang Li
- Key Laboratory of Molecular Enzymology and Engineering of Ministry of Education School of Life Sciences; Jilin University; 130023 Changchun P. R. China
| | - Lei Wang
- Key Laboratory of Molecular Enzymology and Engineering of Ministry of Education School of Life Sciences; Jilin University; 130023 Changchun P. R. China
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46
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Carminati DM, Fasan R. Stereoselective Cyclopropanation of Electron-Deficient Olefins with a Cofactor Redesigned Carbene Transferase Featuring Radical Reactivity. ACS Catal 2019; 9:9683-9697. [PMID: 32257582 DOI: 10.1021/acscatal.9b02272] [Citation(s) in RCA: 71] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Engineered myoglobins and other hemoproteins have recently emerged as promising catalysts for asymmetric olefin cyclopropanation reactions via carbene transfer chemistry. Despite this progress, the transformation of electron-poor alkenes has proven very challenging using these systems. Here, we describe the design of a myoglobin-based carbene transferase incorporating a non-native iron-porphyrin cofactor and axial ligand, as an efficient catalyst for the asymmetric cyclopropanation of electron-deficient alkenes. Using this metalloenzyme, a broad range of both electron-rich and electron-deficient alkenes are cyclopropanated with high efficiency and high diastereo- and enantioselectivity (up to >99% de and ee). Mechanistic studies revealed that the expanded reaction scope of this carbene transferase is dependent upon the acquisition of metallocarbene radical reactivity as a result of the reconfigured coordination environment around the metal center. The radical-based reactivity of this system diverges from the electrophilic reactivity of myoglobin and most of known organometallic carbene transfer catalysts. This work showcases the value of cofactor redesign toward tuning and expanding the reactivity of metalloproteins in abiological reactions and it provides a biocatalytic solution to the asymmetric cyclopropanation of electrodeficient alkenes. The metallocarbene radical reactivity exhibited by this biocatalyst is anticipated to prove useful in the context of a variety of other synthetic transformations.
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Affiliation(s)
- Daniela M. Carminati
- Department of Chemistry, University of Rochester, Rochester, New York 14627, United States
| | - Rudi Fasan
- Department of Chemistry, University of Rochester, Rochester, New York 14627, United States
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47
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Hernán‐Gómez A, Rodríguez M, Parella T, Costas M. Electrophilic Iron Catalyst Paired with a Lithium Cation Enables Selective Functionalization of Non‐Activated Aliphatic C−H Bonds via Metallocarbene Intermediates. Angew Chem Int Ed Engl 2019; 58:13904-13911. [DOI: 10.1002/anie.201905986] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2019] [Revised: 07/19/2019] [Indexed: 12/27/2022]
Affiliation(s)
- Alberto Hernán‐Gómez
- Departament de QuímicaUniversitat de GironaInstitut de Química Computacional i Catàlisi (IQCC) C/ M. Aurèlia Capmany 69 17003 Girona Catalonia Spain
| | - Mònica Rodríguez
- Departament de QuímicaUniversitat de GironaInstitut de Química Computacional i Catàlisi (IQCC) C/ M. Aurèlia Capmany 69 17003 Girona Catalonia Spain
| | - Teodor Parella
- Servei de Resonància Magnètica NuclearUniversitat Autònoma de Barcelona E-08193 Bellaterra Barcelona Spain
| | - Miquel Costas
- Departament de QuímicaUniversitat de GironaInstitut de Química Computacional i Catàlisi (IQCC) C/ M. Aurèlia Capmany 69 17003 Girona Catalonia Spain
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48
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Zhang Y. Computational Investigations of Heme Carbenes and Heme Carbene Transfer Reactions. Chemistry 2019; 25:13231-13247. [DOI: 10.1002/chem.201901984] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2019] [Revised: 06/19/2019] [Indexed: 12/15/2022]
Affiliation(s)
- Yong Zhang
- Department of Chemistry and Chemical Biology Stevens Institute of Technology 1 Castle Point on Hudson Hoboken NJ 07030 USA
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49
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Hernán‐Gómez A, Rodríguez M, Parella T, Costas M. Electrophilic Iron Catalyst Paired with a Lithium Cation Enables Selective Functionalization of Non‐Activated Aliphatic C−H Bonds via Metallocarbene Intermediates. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201905986] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Alberto Hernán‐Gómez
- Departament de QuímicaUniversitat de GironaInstitut de Química Computacional i Catàlisi (IQCC) C/ M. Aurèlia Capmany 69 17003 Girona Catalonia Spain
| | - Mònica Rodríguez
- Departament de QuímicaUniversitat de GironaInstitut de Química Computacional i Catàlisi (IQCC) C/ M. Aurèlia Capmany 69 17003 Girona Catalonia Spain
| | - Teodor Parella
- Servei de Resonància Magnètica NuclearUniversitat Autònoma de Barcelona E-08193 Bellaterra Barcelona Spain
| | - Miquel Costas
- Departament de QuímicaUniversitat de GironaInstitut de Química Computacional i Catàlisi (IQCC) C/ M. Aurèlia Capmany 69 17003 Girona Catalonia Spain
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50
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Khade RL, Chandgude AL, Fasan R, Zhang Y. Mechanistic Investigation of Biocatalytic Heme Carbenoid Si-H Insertions. ChemCatChem 2019; 11:3101-3108. [PMID: 31428208 PMCID: PMC6699785 DOI: 10.1002/cctc.201801755] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2018] [Indexed: 12/28/2022]
Abstract
Recent studies reported the development of biocatalytic heme carbenoid Si-H insertions for the selective formation of carbon-silicon bonds, but many mechanistic questions remain unaddressed. To this end, a DFT mechanistic investigation was performed which reveals an FeII-based concerted hydride transfer mechanism with early transition state feature. The results from these computational analyses are consistent with experimental data of radical trapping, kinetic isotope effects, and structure-reactivity data using engineered variants of hemoproteins. Detailed geometric and electronic profiles along the heme catalyzed Si-H insertion pathways were provided to help understand the origin of experimental reactivity trends. Quantitative relationships between reaction barriers and some properties such as charge transfer from substrate to heme carbene and Si-H bond length change from reactant to transition state were found. Results suggest catalyst modifications to facilitate the charge transfer from the silane substrate to the carbene, which was determined to be a major electronic driving force of this reaction, should enable the development of improved biocatalysts for Si-H carbene insertion reactions.
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Affiliation(s)
- Rahul L Khade
- Department of Chemistry and Chemical Biology, Stevens Institute of Technology, 1 Castle Point on Hudson, Hoboken, NJ 07030 (USA)
| | - Ajay L Chandgude
- Department of Chemistry, University of Rochester, 120 Trustee Road, Rochester, NY 14627 (USA)
| | - Rudi Fasan
- Department of Chemistry, University of Rochester, 120 Trustee Road, Rochester, NY 14627 (USA)
| | - Yong Zhang
- Department of Chemistry and Chemical Biology, Stevens Institute of Technology, 1 Castle Point on Hudson, Hoboken, NJ 07030 (USA)
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