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For: Taylor EA, Clinch K, Kelly PM, Li L, Evans GB, Tyler PC, Schramm VL. Acyclic Ribooxacarbenium Ion Mimics as Transition State Analogues of Human and Malarial Purine Nucleoside Phosphorylases. J Am Chem Soc 2007;129:6984-5. [PMID: 17497780 DOI: 10.1021/ja071087s] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Number Cited by Other Article(s)
1
Chen Y, Li Y, Gao J, Yu Q, Zhang Y, Zhang J. Perspectives and challenges in developing small molecules targeting purine nucleoside phosphorylase. Eur J Med Chem 2024;271:116437. [PMID: 38701712 DOI: 10.1016/j.ejmech.2024.116437] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2024] [Revised: 04/16/2024] [Accepted: 04/17/2024] [Indexed: 05/05/2024]
2
Glockzin K, Kostomiris D, Minnow YVT, Suthagar K, Clinch K, Gai S, Buckler JN, Schramm VL, Tyler PC, Meek TD, Katzfuss A. Kinetic Characterization and Inhibition of Trypanosoma cruzi Hypoxanthine–Guanine Phosphoribosyltransferases. Biochemistry 2022;61:2088-2105. [PMID: 36193631 PMCID: PMC9536471 DOI: 10.1021/acs.biochem.2c00312] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
3
Rabuffetti M, Rinaldi F, Lo Bianco A, Speranza G, Ubiali D, de Moraes MC, Rodrigues Pereira da Silva LC, Massolini G, Calleri E, Lavecchia A. Discovery of a Novel Inhibitor of Human Purine Nucleoside Phosphorylase by a Simple Hydrophilic Interaction Liquid Chromatography Enzymatic Assay. ChemMedChem 2021;16:1325-1334. [PMID: 33405358 DOI: 10.1002/cmdc.202000874] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2020] [Indexed: 11/10/2022]
4
Kumari P, Mishra VS, Narayana C, Khanna A, Chakrabarty A, Sagar R. Design and efficient synthesis of pyrazoline and isoxazole bridged indole C-glycoside hybrids as potential anticancer agents. Sci Rep 2020;10:6660. [PMID: 32313038 PMCID: PMC7170901 DOI: 10.1038/s41598-020-63377-x] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2019] [Accepted: 03/23/2020] [Indexed: 01/26/2023]  Open
5
Cheviet T, Lefebvre-Tournier I, Wein S, Peyrottes S. Plasmodium Purine Metabolism and Its Inhibition by Nucleoside and Nucleotide Analogues. J Med Chem 2019;62:8365-8391. [PMID: 30964283 DOI: 10.1021/acs.jmedchem.9b00182] [Citation(s) in RCA: 28] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
6
Roth C, Moroz OV, Ariza A, Skov LK, Ayabe K, Davies GJ, Wilson KS. Structural insight into industrially relevant glucoamylases: flexible positions of starch-binding domains. ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY 2018;74:463-470. [PMID: 29717717 DOI: 10.1107/s2059798318004989] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2018] [Accepted: 03/27/2018] [Indexed: 11/10/2022]
7
Gebre ST, Cameron SA, Li L, Babu YS, Schramm VL. Intracellular rebinding of transition-state analogues provides extended in vivo inhibition lifetimes on human purine nucleoside phosphorylase. J Biol Chem 2017;292:15907-15915. [PMID: 28794158 DOI: 10.1074/jbc.m117.801779] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2017] [Revised: 08/07/2017] [Indexed: 01/16/2023]  Open
8
Derakhshani-Molayousefi M, Kashefolgheta S, Eilers JE, Lu Y. Computational Replication of the Primary Isotope Dependence of Secondary Kinetic Isotope Effects in Solution Hydride-Transfer Reactions: Supporting the Isotopically Different Tunneling Ready State Conformations. J Phys Chem A 2016;120:4277-84. [DOI: 10.1021/acs.jpca.6b03571] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
9
Zoi I, Suarez J, Antoniou D, Cameron SA, Schramm VL, Schwartz SD. Modulating Enzyme Catalysis through Mutations Designed to Alter Rapid Protein Dynamics. J Am Chem Soc 2016;138:3403-9. [PMID: 26927977 PMCID: PMC4794390 DOI: 10.1021/jacs.5b12551] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
10
Hernández D, Boto A. Nucleoside Analogues: Synthesis and Biological Properties of Azanucleoside Derivatives. European J Org Chem 2014. [DOI: 10.1002/ejoc.201301731] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
11
Renck D, Machado P, Souto AA, Rosado LA, Erig T, Campos MM, Farias CB, Roesler R, Timmers LFSM, de Souza ON, Santos DS, Basso LA. Design of novel potent inhibitors of human uridine phosphorylase-1: synthesis, inhibition studies, thermodynamics, and in vitro influence on 5-fluorouracil cytotoxicity. J Med Chem 2013;56:8892-902. [PMID: 24131420 DOI: 10.1021/jm401389u] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
12
Barnett CB, Naidoo KJ. PNP diminishes guanosine glycosidic bond strength through restrictive ring pucker as a precursor to phosphorylation. J Phys Chem B 2013;117:6019-26. [PMID: 23621450 DOI: 10.1021/jp3109013] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
13
Khalafi-Nezhad A, Divar M, Panahi F. Nucleosides as reagents in multicomponent reactions: one-pot synthesis of heterocyclic nucleoside analogues incorporating pyrimidine-fused rings. Tetrahedron Lett 2013. [DOI: 10.1016/j.tetlet.2012.11.003] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
14
The crystallization and structural analysis of cellulases (and other glycoside hydrolases): strategies and tactics. Methods Enzymol 2012;510:141-68. [PMID: 22608725 DOI: 10.1016/b978-0-12-415931-0.00008-2] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
15
Thompson AJ, Heu T, Shaghasi T, Benyamino R, Jones A, Friis EP, Wilson KS, Davies GJ. Structure of the catalytic core module of theChaetomium thermophilumfamily GH6 cellobiohydrolase Cel6A. ACTA CRYSTALLOGRAPHICA SECTION D: BIOLOGICAL CRYSTALLOGRAPHY 2012;68:875-82. [DOI: 10.1107/s0907444912016496] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/24/2011] [Accepted: 04/16/2012] [Indexed: 11/11/2022]
16
Barandun LJ, Immekus F, Kohler PC, Tonazzi S, Wagner B, Wendelspiess S, Ritschel T, Heine A, Kansy M, Klebe G, Diederich F. From lin-benzoguanines to lin-benzohypoxanthines as ligands for Zymomonas mobilis tRNA-guanine transglycosylase: replacement of protein-ligand hydrogen bonding by importing water clusters. Chemistry 2012;18:9246-57. [PMID: 22736391 DOI: 10.1002/chem.201200809] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2012] [Indexed: 11/12/2022]
17
Hazleton KZ, Ho MC, Cassera MB, Clinch K, Crump DR, Rosario I, Merino EF, Almo SC, Tyler PC, Schramm VL. Acyclic immucillin phosphonates: second-generation inhibitors of Plasmodium falciparum hypoxanthine-guanine-xanthine phosphoribosyltransferase. CHEMISTRY & BIOLOGY 2012;19:721-30. [PMID: 22726686 PMCID: PMC3397391 DOI: 10.1016/j.chembiol.2012.04.012] [Citation(s) in RCA: 53] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/29/2012] [Revised: 04/03/2012] [Accepted: 04/06/2012] [Indexed: 01/07/2023]
18
Martı́nez-Montero S, Fernández S, Sanghvi YS, Chattopadhyaya J, Ganesan M, Ramesh NG, Gotor V, Ferrero M. Design and Divergent Synthesis of Aza Nucleosides from a Chiral Imino Sugar. J Org Chem 2012;77:4671-8. [DOI: 10.1021/jo3004452] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
19
Breda A, Machado P, Rosado LA, Souto AA, Santos DS, Basso LA. Pyrimidin-2(1H)-ones based inhibitors of Mycobacterium tuberculosis orotate phosphoribosyltransferase. Eur J Med Chem 2012;54:113-22. [PMID: 22608674 DOI: 10.1016/j.ejmech.2012.04.031] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2011] [Revised: 04/20/2012] [Accepted: 04/24/2012] [Indexed: 11/30/2022]
20
Wang J, Li Q, Ge Z, Li R. A versatile and convenient route to ketone C-pyranosides and ketone C-furanosides from unprotected sugars. Tetrahedron 2012. [DOI: 10.1016/j.tet.2011.11.029] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
21
Schramm VL. Enzymatic transition states, transition-state analogs, dynamics, thermodynamics, and lifetimes. Annu Rev Biochem 2011;80:703-32. [PMID: 21675920 DOI: 10.1146/annurev-biochem-061809-100742] [Citation(s) in RCA: 157] [Impact Index Per Article: 12.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023]
22
Burrows JN, Waterson D. Discovering New Medicines to Control and Eradicate Malaria. TOPICS IN MEDICINAL CHEMISTRY 2011. [DOI: 10.1007/7355_2011_14] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
23
Exploring new inhibitors of Plasmodium falciparum purine nucleoside phosphorylase. Eur J Med Chem 2010;45:5140-9. [DOI: 10.1016/j.ejmech.2010.08.026] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2010] [Revised: 08/09/2010] [Accepted: 08/10/2010] [Indexed: 11/21/2022]
24
Boto A, Hernández D, Hernández R. One-Pot Conversion of Proline Derivatives into Iodinated Iminosugar-Based Nucleosides, Useful Precursors of Highly Functionalized Nucleoside Analogues. European J Org Chem 2010. [DOI: 10.1002/ejoc.201000997] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
25
Boto A, Hernández D, Hernández R. One-Pot Synthesis of Azanucleosides from Proline Derivatives - Stereoselectivity in Sequential Processes. European J Org Chem 2010. [DOI: 10.1002/ejoc.201000360] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
26
A direct NMR method for the measurement of competitive kinetic isotope effects. Nat Chem Biol 2010;6:405-7. [DOI: 10.1038/nchembio.352] [Citation(s) in RCA: 55] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2009] [Accepted: 02/04/2010] [Indexed: 11/08/2022]
27
Edwards AA, Tipton JD, Brenowitz MD, Emmett MR, Marshall AG, Evans GB, Tyler PC, Schramm VL. Conformational states of human purine nucleoside phosphorylase at rest, at work, and with transition state analogues. Biochemistry 2010;49:2058-67. [PMID: 20108972 DOI: 10.1021/bi902041j] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
28
Senthil Kumar R, Karthikeyan K, Phani Kumar B, Muralidharan D, Perumal P. Synthesis of densely functionalised C-glycosides by a tandem oxy Michael addition–Wittig olefination pathway. Carbohydr Res 2010;345:457-61. [DOI: 10.1016/j.carres.2009.12.014] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2009] [Revised: 11/19/2009] [Accepted: 12/14/2009] [Indexed: 10/20/2022]
29
Edwards AA, Mason JM, Clinch K, Tyler PC, Evans GB, Schramm VL. Altered enthalpy-entropy compensation in picomolar transition state analogues of human purine nucleoside phosphorylase. Biochemistry 2009;48:5226-38. [PMID: 19425594 DOI: 10.1021/bi9005896] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
30
Clinch K, Evans GB, Fröhlich RFG, Furneaux RH, Kelly PM, Legentil L, Murkin AS, Li L, Schramm VL, Tyler PC, Woolhouse AD. Third-generation immucillins: syntheses and bioactivities of acyclic immucillin inhibitors of human purine nucleoside phosphorylase. J Med Chem 2009;52:1126-43. [PMID: 19170524 DOI: 10.1021/jm801421q] [Citation(s) in RCA: 63] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
31
Hirschi JS, Takeya T, Hang C, Singleton DA. Transition-state geometry measurements from (13)c isotope effects. The experimental transition state for the epoxidation of alkenes with oxaziridines. J Am Chem Soc 2009;131:2397-403. [PMID: 19146405 PMCID: PMC2640442 DOI: 10.1021/ja8088636] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
32
Chemical biologists gather in Heidelberg. Nat Chem Biol 2009;5:66-9. [DOI: 10.1038/nchembio0209-66] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
33
Mason JM, Murkin AS, Li L, Schramm VL, Gainsford GJ, Skelton BW. A beta-fluoroamine inhibitor of purine nucleoside phosphorylase. J Med Chem 2008;51:5880-4. [PMID: 18800772 DOI: 10.1021/jm800792b] [Citation(s) in RCA: 45] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
34
Overexpression, purification and characterization of functional calf purine nucleoside phosphorylase (PNP). Protein Expr Purif 2008;61:122-30. [DOI: 10.1016/j.pep.2008.06.002] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2008] [Revised: 05/30/2008] [Accepted: 06/02/2008] [Indexed: 11/21/2022]
35
Luo M, Li L, Schramm VL. Remote Mutations Alter Transition-State Structure of Human Purine Nucleoside Phosphorylase. Biochemistry 2008;47:2565-76. [DOI: 10.1021/bi702133x] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
36
Evans GB, Furneaux RH, Greatrex B, Murkin AS, Schramm VL, Tyler PC. Azetidine Based Transition State Analogue Inhibitors ofN-Ribosyl Hydrolases and Phosphorylases. J Med Chem 2008;51:948-56. [DOI: 10.1021/jm701265n] [Citation(s) in RCA: 67] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
37
Amyes TL, Richard JP. Rational design of transition-state analogues as potent enzyme inhibitors with therapeutic applications. ACS Chem Biol 2007;2:711-4. [PMID: 18030986 DOI: 10.1021/cb700228t] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
38
Taylor EA, Rinaldo-Matthis A, Li L, Ghanem M, Hazleton KZ, Cassera MB, Almo SC, Schramm VL. Anopheles gambiae purine nucleoside phosphorylase: catalysis, structure, and inhibition. Biochemistry 2007;46:12405-15. [PMID: 17918964 DOI: 10.1021/bi7010256] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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