1
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Kerfeld CA, Sutter M. Orange carotenoid proteins: structural understanding of evolution and function. Trends Biochem Sci 2024:S0968-0004(24)00110-5. [PMID: 38789305 DOI: 10.1016/j.tibs.2024.04.010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2024] [Revised: 04/15/2024] [Accepted: 04/30/2024] [Indexed: 05/26/2024]
Abstract
Cyanobacteria uniquely contain a primitive water-soluble carotenoprotein, the orange carotenoid protein (OCP). Nearly all extant cyanobacterial genomes contain genes for the OCP or its homologs, implying an evolutionary constraint for cyanobacteria to conserve its function. Genes encoding the OCP and its two constituent structural domains, the N-terminal domain, helical carotenoid proteins (HCPs), and its C-terminal domain, are found in the most basal lineages of extant cyanobacteria. These three carotenoproteins exemplify the importance of the protein for carotenoid properties, including protein dynamics, in response to environmental changes in facilitating a photoresponse and energy quenching. Here, we review new structural insights for these carotenoproteins and situate the role of the protein in what is currently understood about their functions.
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Affiliation(s)
- Cheryl A Kerfeld
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, MI 48824, USA; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA; Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
| | - Markus Sutter
- MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, MI 48824, USA; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA; Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
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2
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Pereira AM, Martins AO, Batista-Silva W, Condori-Apfata JA, Silva VF, Oliveira LA, Andrade ES, Martins SCV, Medeiros DB, Nascimento VL, Fernie AR, Nunes-Nesi A, Araújo WL. Differential content of leaf and fruit pigment in tomatoes culminate in a complex metabolic reprogramming without growth impacts. JOURNAL OF PLANT PHYSIOLOGY 2024; 293:154170. [PMID: 38271894 DOI: 10.1016/j.jplph.2024.154170] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2023] [Revised: 12/20/2023] [Accepted: 01/02/2024] [Indexed: 01/27/2024]
Abstract
Although significant efforts to produce carotenoid-enriched foods either by biotechnology or traditional breeding strategies have been carried out, our understanding of how changes in the carotenoid biosynthesis might affect overall plant performance remains limited. Here, we investigate how the metabolic machinery of well characterized tomato carotenoid mutant plants [namely crimson (old gold-og), Delta carotene (Del) and tangerine (t)] adjusts itself to varying carotenoid biosynthesis and whether these adjustments are supported by a reprogramming of photosynthetic and central metabolism in the source organs (leaves). We observed that mutations og, Del and t did not greatly affect vegetative growth, leaf anatomy and gas exchange parameters. However, an exquisite metabolic reprogramming was recorded on the leaves, with an increase in levels of amino acids and reduction of organic acids. Taken together, our results show that despite minor impacts on growth and gas exchange, carbon flux is extensively affected, leading to adjustments in tomato leaves metabolism to support changes in carotenoid biosynthesis on fruits (sinks). We discuss these data in the context of our current understanding of metabolic adjustments and carotenoid biosynthesis as well as regarding to improving human nutrition.
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Affiliation(s)
- Auderlan M Pereira
- National Institute of Science and Technology on Plant Physiology Under Stress Conditions, Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil
| | - Auxiliadora O Martins
- National Institute of Science and Technology on Plant Physiology Under Stress Conditions, Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil
| | - William Batista-Silva
- National Institute of Science and Technology on Plant Physiology Under Stress Conditions, Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil
| | - Jorge A Condori-Apfata
- National Institute of Science and Technology on Plant Physiology Under Stress Conditions, Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil
| | - Victor F Silva
- National Institute of Science and Technology on Plant Physiology Under Stress Conditions, Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil
| | - Leonardo A Oliveira
- National Institute of Science and Technology on Plant Physiology Under Stress Conditions, Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil
| | - Eduarda Santos Andrade
- Setor de Fisiologia Vegetal - Departamento de Biologia, Universidade Federal de Lavras, Lavras, Minas Gerais, 37200-000, Brazil
| | - Samuel C V Martins
- National Institute of Science and Technology on Plant Physiology Under Stress Conditions, Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil
| | - David B Medeiros
- National Institute of Science and Technology on Plant Physiology Under Stress Conditions, Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil
| | - Vitor L Nascimento
- Setor de Fisiologia Vegetal - Departamento de Biologia, Universidade Federal de Lavras, Lavras, Minas Gerais, 37200-000, Brazil
| | - Alisdair R Fernie
- Max-Planck-Institute of Molecular Plant Physiology, Am Mühlenberg 1, 14476, Potsdam Golm, Germany
| | - Adriano Nunes-Nesi
- National Institute of Science and Technology on Plant Physiology Under Stress Conditions, Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil
| | - Wagner L Araújo
- National Institute of Science and Technology on Plant Physiology Under Stress Conditions, Departamento de Biologia Vegetal, Universidade Federal de Viçosa, Viçosa, Minas Gerais, 36570-900, Brazil.
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3
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Li J, Zeng T, Qu Z, Zhai Y, Li H. Energy transfer from two luteins to chlorophylls in light-harvesting complex II study by using exciton models with phase correction. Phys Chem Chem Phys 2024; 26:1023-1029. [PMID: 38093671 DOI: 10.1039/d3cp05278h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2024]
Abstract
In light-harvesting complex II of plants, the two lutein pigments (LUT1 and LUT2) are always paired and an energy transfer pathway between them is believed to exist. However, it remains unclear whether this pathway is essential for the energy transfer between carotenoids and chlorophylls. In this work, we performed hybrid quantum mechanics/molecular mechanics simulations with Frenkel exciton models to investigate this energy transfer. The results show that the energy transfer pathways between the S2 state of LUT1 and CLAs are not affected by LUT2 S2. The energy transfer between LUT and chlorophyll-a (CLA) also follows a resonance mechanism. The two LUTs have different energy transfer pathways according to their energy gaps and coupling strengths with each CLA. The present work sheds light on the energy transfer pathways involved in the two LUTs.
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Affiliation(s)
- Jiarui Li
- Institute of Theoretical Chemistry, College of Chemistry, Jilin University, 2519 Jiefang Road, Changchun, 130023, China.
| | - Tao Zeng
- Department of Chemistry, York University, 4700 Keele Street, Toronto, Ontario M3J 1P3, Canada
| | - Zexing Qu
- Institute of Theoretical Chemistry, College of Chemistry, Jilin University, 2519 Jiefang Road, Changchun, 130023, China.
| | - Yu Zhai
- Beijing National Laboratory for Molecular Sciences, Institute of Theoretical and Computational Chemistry, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China.
| | - Hui Li
- Institute of Theoretical Chemistry, College of Chemistry, Jilin University, 2519 Jiefang Road, Changchun, 130023, China.
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4
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Tsoraev GV, Bukhanko A, Budylin GS, Shirshin EA, Slonimskiy YB, Sluchanko NN, Kloz M, Cherepanov DA, Shakina YV, Ge B, Moldenhauer M, Friedrich T, Golub M, Pieper J, Maksimov EG, Rubin AB. Stages of OCP-FRP Interactions in the Regulation of Photoprotection in Cyanobacteria, Part 1: Time-Resolved Spectroscopy. J Phys Chem B 2023; 127:1890-1900. [PMID: 36799909 DOI: 10.1021/acs.jpcb.2c07189] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/18/2023]
Abstract
Most cyanobacteria utilize a water-soluble Orange Carotenoid Protein (OCP) to protect their light-harvesting complexes from photodamage. The Fluorescence Recovery Protein (FRP) is used to restore photosynthetic activity by inactivating OCP via dynamic OCP-FRP interactions, a multistage process that remains underexplored. In this work, applying time-resolved spectroscopy, we demonstrate that the interaction of FRP with the photoactivated OCP begins early in the photocycle. Interacting with the compact OCP state, FRP completely prevents the possibility of OCP domain separation and formation of the signaling state capable of interacting with the antenna. The structural element that prevents FRP binding and formation of the complex is the short α-helix at the beginning of the N-terminal domain of OCP, which masks the primary site in the C-terminal domain of OCP. We determined the rate of opening of this site and show that it remains exposed long after the relaxation of the red OCP states. Observations of the OCP transitions on the ms time scale revealed that the relaxation of the orange photocycle intermediates is accompanied by an increase in the interaction of the carotenoid keto group with the hydrogen bond donor tyrosine-201. Our data refine the current model of photoinduced OCP transitions and the interaction of its intermediates with FRP.
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Affiliation(s)
- Georgy V Tsoraev
- Faculty of Biology, M.V. Lomonosov Moscow State University, 119234 Moscow, Russia
| | - Antonina Bukhanko
- Faculty of Biology, M.V. Lomonosov Moscow State University, 119234 Moscow, Russia
| | - Gleb S Budylin
- Faculty of Physics, M.V. Lomonosov Moscow State University, 119991 Moscow, Russia.,Laboratory of Clinical Biophotonics, Scientific and Technological Biomedical Park, Sechenov University, 119435 Moscow, Russia
| | - Evgeny A Shirshin
- Faculty of Physics, M.V. Lomonosov Moscow State University, 119991 Moscow, Russia
| | - Yury B Slonimskiy
- A.N. Bach Institute of Biochemistry, Federal Research Center of Biotechnology of the Russian Academy of Sciences, 119071 Moscow, Russia
| | - Nikolai N Sluchanko
- A.N. Bach Institute of Biochemistry, Federal Research Center of Biotechnology of the Russian Academy of Sciences, 119071 Moscow, Russia
| | - Miroslav Kloz
- ELI-Beamlines, Institute of Physics, Dolní Břežany, 252 41 Czech Republic
| | - Dmitry A Cherepanov
- N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, 142432 Moscow, Russia.,A.N. Belozersky Institute of Physical-Chemical Biology, Moscow State University, 119991 Moscow, Russia
| | | | - Baosheng Ge
- China University of Petroleum (Huadong), College of Chemical Engineering, Qingdao 266580, PR China
| | - Marcus Moldenhauer
- Technische Universität Berlin, Institute of Chemistry PC14, 10623 Berlin, Germany
| | - Thomas Friedrich
- Technische Universität Berlin, Institute of Chemistry PC14, 10623 Berlin, Germany
| | - Maksym Golub
- Institute of Physics, University of Tartu, 50411 Tartu, Estonia
| | - Jörg Pieper
- Institute of Physics, University of Tartu, 50411 Tartu, Estonia
| | - Eugene G Maksimov
- Faculty of Biology, M.V. Lomonosov Moscow State University, 119234 Moscow, Russia
| | - Andrew B Rubin
- Faculty of Biology, M.V. Lomonosov Moscow State University, 119234 Moscow, Russia
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5
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Sláma V, Cupellini L, Mennucci B. Excitonic Nature of Carotenoid–Phthalocyanine Dyads and Its Role in Transient Absorption Spectra. ACS PHYSICAL CHEMISTRY AU 2022; 2:206-215. [PMID: 35637783 PMCID: PMC9136948 DOI: 10.1021/acsphyschemau.1c00049] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/13/2021] [Revised: 01/13/2022] [Accepted: 01/18/2022] [Indexed: 11/28/2022]
Abstract
![]()
Artificial carotenoid–tetrapyrrole
dyads have been extensively
used as model systems to understand the quenching mechanisms that
occur in light-harvesting complexes during nonphotochemical quenching.
In particular, dyads containing a carotenoid covalently linked to
a zinc phthalocyanine have been studied by transient absorption spectroscopy,
and the observed signals have been interpreted in terms of an excitonically
coupled state involving the lowest excited states of the two fragments.
If present, such excitonic delocalization would have significant implications
on the mechanism of nonphotochemical quenching. Here, we use quantum
chemical calculations to show that this delocalization is not needed
to reproduce the transient absorption spectra. On the contrary, the
observed signals can be explained through excitonic couplings in the
higher-energy manifold of states. We also argue that the covalent
linkage between the two fragments allows for electronic communications,
which complicates the analysis of the spectra based on two independent
but coupled moieties. These findings call for a more thorough reassessment
of the photophysics in these dyads and its implications in the context
of natural nonphotochemical quenching.
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Affiliation(s)
- Vladislav Sláma
- Dipartimento di Chimica e Chimica Industriale, University of Pisa, via G. Moruzzi 13, 56124 Pisa, Italy
| | - Lorenzo Cupellini
- Dipartimento di Chimica e Chimica Industriale, University of Pisa, via G. Moruzzi 13, 56124 Pisa, Italy
| | - Benedetta Mennucci
- Dipartimento di Chimica e Chimica Industriale, University of Pisa, via G. Moruzzi 13, 56124 Pisa, Italy
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6
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Ravensbergen J, Pillai S, Méndez-Hernández DD, Frese RN, van Grondelle R, Gust D, Moore TA, Moore AL, Kennis JTM. Dual Singlet Excited-State Quenching Mechanisms in an Artificial Caroteno-Phthalocyanine Light Harvesting Antenna. ACS PHYSICAL CHEMISTRY AU 2022; 2:59-67. [PMID: 35098245 PMCID: PMC8796278 DOI: 10.1021/acsphyschemau.1c00008] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/26/2021] [Revised: 09/29/2021] [Accepted: 09/29/2021] [Indexed: 11/29/2022]
Abstract
![]()
Under excess illumination,
photosystem II of plants dissipates
excess energy through the quenching of chlorophyll fluorescence in
the light harvesting antenna. Various models involving chlorophyll
quenching by carotenoids have been proposed, including (i) direct
energy transfer from chlorophyll to the low-lying optically forbidden
carotenoid S1 state, (ii) formation of a collective quenched
chlorophyll–carotenoid S1 excitonic state, (iii)
chlorophyll–carotenoid charge separation and recombination,
and (iv) chlorophyll–chlorophyll charge separation and recombination.
In previous work, the first three processes were mimicked in model
systems: in a Zn-phthalocyanine–carotenoid dyad with an amide
linker, direct energy transfer was observed by femtosecond transient
absorption spectroscopy, whereas in a Zn-phthalocyanine–carotenoid
dyad with an amine linker excitonic quenching was demonstrated. Here,
we present a transient absorption spectroscopic study on a Zn-phthalocyanine–carotenoid
dyad with a phenylene linker. We observe that two quenching phases
of the phthalocyanine excited state exist at 77 and 213 ps in addition
to an unquenched phase at 2.7 ns. Within our instrument response of
∼100 fs, carotenoid S1 features rise which point
at an excitonic quenching mechanism. Strikingly, we observe an additional
rise of carotenoid S1 features at 3.6 ps, which shows that
a direct energy transfer mechanism in an inverted kinetics regime
is also in effect. We assign the 77 ps decay component to excitonic
quenching and the 3.6 ps/213 ps rise and decay components to direct
energy transfer. Our results indicate that dual quenching mechanisms
may be active in the same molecular system, in addition to an unquenched
fraction. Computational chemistry results indicate the presence of
multiple conformers where one of the dihedral angles of the phenylene
linker assumes distinct values. We propose that the parallel quenching
pathways and the unquenched fraction result from such conformational
subpopulations. Our results suggest that it is possible to switch
between different regimes of quenching and nonquenching through a
conformational change on the same molecule, offering insights into
potential mechanisms used in biological photosynthesis to adapt to
light intensity changes on fast time scales.
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Affiliation(s)
- Janneke Ravensbergen
- Department of Physics and Astronomy, Faculty of Sciences, Vrije Universiteit, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Smitha Pillai
- School of Molecular Sciences and Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, Arizona 85287-1605, United States
| | | | - Raoul N. Frese
- Department of Physics and Astronomy, Faculty of Sciences, Vrije Universiteit, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Rienk van Grondelle
- Department of Physics and Astronomy, Faculty of Sciences, Vrije Universiteit, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Devens Gust
- School of Molecular Sciences and Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, Arizona 85287-1605, United States
| | - Thomas A. Moore
- School of Molecular Sciences and Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, Arizona 85287-1605, United States
| | - Ana L. Moore
- School of Molecular Sciences and Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, Arizona 85287-1605, United States
| | - John T. M. Kennis
- Department of Physics and Astronomy, Faculty of Sciences, Vrije Universiteit, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
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7
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Yaroshevich IA, Maksimov EG, Sluchanko NN, Zlenko DV, Stepanov AV, Slutskaya EA, Slonimskiy YB, Botnarevskii VS, Remeeva A, Gushchin I, Kovalev K, Gordeliy VI, Shelaev IV, Gostev FE, Khakhulin D, Poddubnyy VV, Gostev TS, Cherepanov DA, Polívka T, Kloz M, Friedrich T, Paschenko VZ, Nadtochenko VA, Rubin AB, Kirpichnikov MP. Role of hydrogen bond alternation and charge transfer states in photoactivation of the Orange Carotenoid Protein. Commun Biol 2021; 4:539. [PMID: 33972665 PMCID: PMC8110590 DOI: 10.1038/s42003-021-02022-3] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2020] [Accepted: 03/16/2021] [Indexed: 11/17/2022] Open
Abstract
Here, we propose a possible photoactivation mechanism of a 35-kDa blue light-triggered photoreceptor, the Orange Carotenoid Protein (OCP), suggesting that the reaction involves the transient formation of a protonated ketocarotenoid (oxocarbenium cation) state. Taking advantage of engineering an OCP variant carrying the Y201W mutation, which shows superior spectroscopic and structural properties, it is shown that the presence of Trp201 augments the impact of one critical H-bond between the ketocarotenoid and the protein. This confers an unprecedented homogeneity of the dark-adapted OCP state and substantially increases the yield of the excited photoproduct S*, which is important for the productive photocycle to proceed. A 1.37 Å crystal structure of OCP Y201W combined with femtosecond time-resolved absorption spectroscopy, kinetic analysis, and deconvolution of the spectral intermediates, as well as extensive quantum chemical calculations incorporating the effect of the local electric field, highlighted the role of charge-transfer states during OCP photoconversion. Yaroshevich et al. present a chemical reaction mechanism of a 35-kDa blue light-triggered photoreceptor, the Orange Carotenoid Protein (OCP). They find that photoactivation critically involves the transient formation of a protonated ketocarotenoid (oxocarbenium cation) state. This study suggests the role of charge-transfer states during OCP photoconversion.
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Affiliation(s)
- Igor A Yaroshevich
- Faculty of Biology, M.V. Lomonosov Moscow State University, Moscow, Russia
| | - Eugene G Maksimov
- Faculty of Biology, M.V. Lomonosov Moscow State University, Moscow, Russia. .,A.N. Bach Institute of Biochemistry, Federal Research Center of Biotechnology of the Russian Academy of Sciences, Moscow, Russia.
| | - Nikolai N Sluchanko
- A.N. Bach Institute of Biochemistry, Federal Research Center of Biotechnology of the Russian Academy of Sciences, Moscow, Russia
| | - Dmitry V Zlenko
- Faculty of Biology, M.V. Lomonosov Moscow State University, Moscow, Russia
| | - Alexey V Stepanov
- M.M. Shemyakin and Yu.A. Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, Russia
| | - Ekaterina A Slutskaya
- Faculty of Biology, M.V. Lomonosov Moscow State University, Moscow, Russia.,M.M. Shemyakin and Yu.A. Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, Russia
| | - Yury B Slonimskiy
- Faculty of Biology, M.V. Lomonosov Moscow State University, Moscow, Russia.,A.N. Bach Institute of Biochemistry, Federal Research Center of Biotechnology of the Russian Academy of Sciences, Moscow, Russia
| | - Viacheslav S Botnarevskii
- Faculty of Biology, M.V. Lomonosov Moscow State University, Moscow, Russia.,A.N. Bach Institute of Biochemistry, Federal Research Center of Biotechnology of the Russian Academy of Sciences, Moscow, Russia
| | - Alina Remeeva
- Research Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny, Russia
| | - Ivan Gushchin
- Research Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny, Russia
| | - Kirill Kovalev
- Research Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny, Russia.,Institut de Biologie Structurale J.-P. Ebel, Université Grenoble Alpes-CEA-CNRS, Grenoble, France.,Institute of Biological Information Processing (IBI-7: Structural Biochemistry), Forschungszentrum Jülich, Jülich, Germany.,JuStruct: Jülich Center for Structural Biology, Forschungszentrum Jülich, Jülich, Germany.,Institute of Crystallography, RWTH Aachen University, Aachen, Germany
| | - Valentin I Gordeliy
- Research Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny, Russia.,Institut de Biologie Structurale J.-P. Ebel, Université Grenoble Alpes-CEA-CNRS, Grenoble, France.,Institute of Biological Information Processing (IBI-7: Structural Biochemistry), Forschungszentrum Jülich, Jülich, Germany.,JuStruct: Jülich Center for Structural Biology, Forschungszentrum Jülich, Jülich, Germany
| | - Ivan V Shelaev
- N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Moscow, Russia
| | - Fedor E Gostev
- N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Moscow, Russia
| | | | | | - Timofey S Gostev
- Faculty of Biology, M.V. Lomonosov Moscow State University, Moscow, Russia
| | - Dmitry A Cherepanov
- N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Moscow, Russia.,A.N. Belozersky Institute of Physical-Chemical Biology, Moscow State University, Moscow, Russia
| | - Tomáš Polívka
- Institute of Physics, Faculty of Science, University of South Bohemia, České Budějovice, Czech Republic
| | - Miroslav Kloz
- ELI-Beamlines, Institute of Physics, Praha, Czech Republic
| | - Thomas Friedrich
- Technische Universität Berlin, Institute of Chemistry PC14, Berlin, Germany
| | | | - Victor A Nadtochenko
- N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, Moscow, Russia
| | - Andrew B Rubin
- Faculty of Biology, M.V. Lomonosov Moscow State University, Moscow, Russia
| | - Mikhail P Kirpichnikov
- Faculty of Biology, M.V. Lomonosov Moscow State University, Moscow, Russia.,M.M. Shemyakin and Yu.A. Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, Russia
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8
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Gacek DA, Betke A, Nowak J, Lokstein H, Walla PJ. Two-photon absorption and excitation spectroscopy of carotenoids, chlorophylls and pigment-protein complexes. Phys Chem Chem Phys 2021; 23:8731-8738. [PMID: 33876032 DOI: 10.1039/d1cp00656h] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
In addition to (bacterio)chlorophylls, (B)Chls, photosynthetic pigment-protein complexes bind carotenoids (Cars) that fulfil various important functions which are not fully understood, yet. However, certain excited states of Cars are optically one-photon forbidden ("dark") and can potentially undergo excitation energy transfer (EET) to (B)Chls following two-photon absorption (TPA). The amount of EET is reflected by the differences in TPA and two-photon excitation (TPE) spectra of a complex (multi-pigment) system. Since it is technically and analytically demanding to resolve optically forbidden states, different studies reported varying contributions of Cars and Chls to TPE/TPA spectra. In a study using well-defined 1 : 1 Car-tetrapyrrole dyads TPE contributions of tetrapyrrole molecules, including Chls, and Cars were measured. In these experiments, TPE of Cars dominated over Chl a TPE in a broad wavelength range. Another study suggested only minor contributions of Cars to TPE spectra of pigment-protein complexes such as the plant main light-harvesting complex (LHCII), in particular for wavelengths longer than ∼600/1200 nm. By joining forces and a combined analysis of all available data by both teams, we try to resolve this apparent contradiction. Here, we demonstrate that reconstruction of a wide spectral range of TPE for LHCII and photosystem I (PSI) requires both, significant Car and Chl contributions. Direct comparison of TPE spectra obtained in both studies demonstrates a good agreement of the primary data. We conclude that in TPE spectra of LHCII and PSI, the contribution of Chls is dominating above 600/1200 nm, whereas the contributions of forbidden Car states increase particularly at wavelengths shorter than 600/1200 nm. Estimates of Car contributions to TPA as well as TPE spectra are given for various wavelengths.
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Affiliation(s)
- Daniel A Gacek
- Technische Universität Braunschweig, Institute for Physical and Theoretical Chemistry, Department for Biophysical Chemistry, Gaußstr. 17, 38106 Braunschweig, Germany.
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9
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Artes Vivancos JM, van Stokkum IHM, Saccon F, Hontani Y, Kloz M, Ruban A, van Grondelle R, Kennis JTM. Unraveling the Excited-State Dynamics and Light-Harvesting Functions of Xanthophylls in Light-Harvesting Complex II Using Femtosecond Stimulated Raman Spectroscopy. J Am Chem Soc 2020; 142:17346-17355. [PMID: 32878439 PMCID: PMC7564077 DOI: 10.1021/jacs.0c04619] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/03/2022]
Abstract
![]()
Photosynthesis
in plants starts with the capture of photons by
light-harvesting complexes (LHCs). Structural biology and spectroscopy
approaches have led to a map of the architecture and energy transfer
pathways between LHC pigments. Still, controversies remain regarding
the role of specific carotenoids in light-harvesting and photoprotection,
obligating the need for high-resolution techniques capable of identifying
excited-state signatures and molecular identities of the various pigments
in photosynthetic systems. Here we demonstrate the successful application
of femtosecond stimulated Raman spectroscopy (FSRS) to a multichromophoric
biological complex, trimers of LHCII. We demonstrate the application
of global and target analysis (GTA) to FSRS data and utilize it to
quantify excitation migration in LHCII trimers. This powerful combination
of techniques allows us to obtain valuable insights into structural,
electronic, and dynamic information from the carotenoids of LHCII
trimers. We report spectral and dynamical information on ground- and
excited-state vibrational modes of the different pigments, resolving
the vibrational relaxation of the carotenoids and the pathways of
energy transfer to chlorophylls. The lifetimes and spectral characteristics
obtained for the S1 state confirm that lutein 2 has a distorted conformation
in LHCII and that the lutein 2 S1 state does not transfer to chlorophylls,
while lutein 1 is the only carotenoid whose S1 state plays a significant
energy-harvesting role. No appreciable energy transfer takes place
from lutein 1 to lutein 2, contradicting recent proposals regarding
the functions of the various carotenoids (Son et al. Chem.2019, 5 (3), 575–584). Also, our results demonstrate that FSRS can be used in combination
with GTA to simultaneously study the electronic and vibrational landscapes
in LHCs and pave the way for in-depth studies of photoprotective conformations
in photosynthetic systems.
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Affiliation(s)
- Juan M Artes Vivancos
- Department of Physics and Astronomy and LaserLaB, Faculty of Science, Vrije Universiteit Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands.,Department of Chemistry, Kennedy College of Science, University of Massachusetts-Lowell, One University Avenue, Lowell, Massachusetts 01854, United States
| | - Ivo H M van Stokkum
- Department of Physics and Astronomy and LaserLaB, Faculty of Science, Vrije Universiteit Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Francesco Saccon
- Queen Mary University of London, School of Biological and Chemical Sciences, Mile End Road/E1 4NS London, U.K
| | - Yusaku Hontani
- Department of Physics and Astronomy and LaserLaB, Faculty of Science, Vrije Universiteit Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Miroslav Kloz
- Department of Physics and Astronomy and LaserLaB, Faculty of Science, Vrije Universiteit Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Alexander Ruban
- Queen Mary University of London, School of Biological and Chemical Sciences, Mile End Road/E1 4NS London, U.K
| | - Rienk van Grondelle
- Department of Physics and Astronomy and LaserLaB, Faculty of Science, Vrije Universiteit Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - John T M Kennis
- Department of Physics and Astronomy and LaserLaB, Faculty of Science, Vrije Universiteit Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
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10
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Balevičius V, Duffy CDP. Excitation quenching in chlorophyll-carotenoid antenna systems: 'coherent' or 'incoherent'. PHOTOSYNTHESIS RESEARCH 2020; 144:301-315. [PMID: 32266612 PMCID: PMC7239839 DOI: 10.1007/s11120-020-00737-8] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2019] [Accepted: 03/18/2020] [Indexed: 05/20/2023]
Abstract
Plants possess an essential ability to rapidly down-regulate light-harvesting in response to high light. This photoprotective process involves the formation of energy-quenching interactions between the chlorophyll and carotenoid pigments within the antenna of Photosystem II (PSII). The nature of these interactions is currently debated, with, among others, 'incoherent' or 'coherent' quenching models (or a combination of the two) suggested by a range of time-resolved spectroscopic measurements. In 'incoherent quenching', energy is transferred from a chlorophyll to a carotenoid and is dissipated due to the intrinsically short excitation lifetime of the latter. 'Coherent quenching' would arise from the quantum mechanical mixing of chlorophyll and carotenoid excited state properties, leading to a reduction in chlorophyll excitation lifetime. The key parameters are the energy gap, [Formula: see text] and the resonance coupling, J, between the two excited states. Coherent quenching will be the dominant process when [Formula: see text] i.e., when the two molecules are resonant, while the quenching will be largely incoherent when [Formula: see text] One would expect quenching to be energetically unfavorable for [Formula: see text] The actual dynamics of quenching lie somewhere between these limiting regimes and have non-trivial dependencies of both J and [Formula: see text] Using the Hierarchical Equation of Motion (HEOM) formalism we present a detailed theoretical examination of these excitation dynamics and their dependence on slow variations in J and [Formula: see text] We first consider an isolated chlorophyll-carotenoid dimer before embedding it within a PSII antenna sub-unit (LHCII). We show that neither energy transfer, nor the mixing of excited state lifetimes represent unique or necessary pathways for quenching and in fact discussing them as distinct quenching mechanisms is misleading. However, we do show that quenching cannot be switched 'on' and 'off' by fine tuning of [Formula: see text] around the resonance point, [Formula: see text] Due to the large reorganization energy of the carotenoid excited state, we find that the presence (or absence) of coherent interactions have almost no impact of the dynamics of quenching. Counter-intuitively significant quenching is present even when the carotenoid excited state lies above that of the chlorophyll. We also show that, above a rather small threshold value of [Formula: see text]quenching becomes less and less sensitive to J (since in the window [Formula: see text] the overall lifetime is independent of it). The requirement for quenching appear to be only that [Formula: see text] Although the coherent/incoherent character of the quenching can vary, the overall kinetics are likely robust with respect to fluctuations in J and [Formula: see text] This may be the basis for previous observations of NPQ with both coherent and incoherent features.
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Affiliation(s)
- Vytautas Balevičius
- School of Biological and Chemical Sciences, Queen Mary University of London, Mile End Road, London, E1 4NS, UK
| | - Christopher D P Duffy
- School of Biological and Chemical Sciences, Queen Mary University of London, Mile End Road, London, E1 4NS, UK.
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11
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Claridge K, Padula D, Troisi A. On the arrangement of chromophores in light harvesting complexes: chance versus design. Faraday Discuss 2019; 221:133-149. [PMID: 31544201 DOI: 10.1039/c9fd00045c] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We used a homogeneous computational approach to derive the excitonic Hamiltonian for five light harvesting complexes containing only one type of chromophore and compare them in terms of statistical descriptors. We then studied the approximate exciton dynamics for the five complexes introducing a measure, the (averaged and time-dependent) inverse participation ratio, that enables the comparison between very diverse complexes on the same ground. We find that the global dynamics are very similar across the set of systems despite the variety of geometric structures of the complexes. In particular, the dynamics of four out of five light harvesting complexes are barely distinguishable with a small variation from the norm seen only for the Fenna-Matthews-Olson complex. We use the information from the realistic Hamiltonians to build a reduced model system that shows how the global dynamics are ultimately dominated by a single parameter, the degree of localization of the excitonic Hamiltonian eigenstates. Considering the physically plausible range of system parameters, the reduced model explains why the dynamics are so similar across most light harvesting complexes containing a single type of chromophore regardless of the detailed pattern of the inter-chromophore excitonic coupling.
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Affiliation(s)
- Kirsten Claridge
- Department of Chemistry, University of Liverpool, Liverpool L69 7ZD, UK.
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12
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Swain A, Cho B, Gautam R, Curtis CJ, Tomat E, Huxter V. Ultrafast Dynamics of Tripyrrindiones in Solution Mediated by Hydrogen-Bonding Interactions. J Phys Chem B 2019; 123:5524-5535. [DOI: 10.1021/acs.jpcb.9b01916] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Affiliation(s)
- Alicia Swain
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721, United States
| | - Byungmoon Cho
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721, United States
| | - Ritika Gautam
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721, United States
| | - Clayton J. Curtis
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721, United States
| | - Elisa Tomat
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721, United States
| | - Vanessa Huxter
- Department of Chemistry and Biochemistry, University of Arizona, Tucson, Arizona 85721, United States
- Department of Physics, University of Arizona, Tucson, Arizona 85721, United States
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13
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Chlorophyll-carotenoid excitation energy transfer and charge transfer in Nannochloropsis oceanica for the regulation of photosynthesis. Proc Natl Acad Sci U S A 2019; 116:3385-3390. [PMID: 30808735 DOI: 10.1073/pnas.1819011116] [Citation(s) in RCA: 65] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Nonphotochemical quenching (NPQ) is a proxy for photoprotective thermal dissipation processes that regulate photosynthetic light harvesting. The identification of NPQ mechanisms and their molecular or physiological triggering factors under in vivo conditions is a matter of controversy. Here, to investigate chlorophyll (Chl)-zeaxanthin (Zea) excitation energy transfer (EET) and charge transfer (CT) as possible NPQ mechanisms, we performed transient absorption (TA) spectroscopy on live cells of the microalga Nannochloropsis oceanica We obtained evidence for the operation of both EET and CT quenching by observing spectral features associated with the Zea S1 and Zea●+ excited-state absorption (ESA) signals, respectively, after Chl excitation. Knockout mutants for genes encoding either violaxanthin de-epoxidase or LHCX1 proteins exhibited strongly inhibited NPQ capabilities and lacked detectable Zea S1 and Zea●+ ESA signals in vivo, which strongly suggests that the accumulation of Zea and active LHCX1 is essential for both EET and CT quenching in N. oceanica.
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14
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Park S, Fischer AL, Steen CJ, Iwai M, Morris JM, Walla PJ, Niyogi KK, Fleming GR. Chlorophyll-Carotenoid Excitation Energy Transfer in High-Light-Exposed Thylakoid Membranes Investigated by Snapshot Transient Absorption Spectroscopy. J Am Chem Soc 2018; 140:11965-11973. [DOI: 10.1021/jacs.8b04844] [Citation(s) in RCA: 33] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Affiliation(s)
- Soomin Park
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Kavli Energy Nanoscience Institute, Berkeley, California 94720, United States
| | - Alexandra L. Fischer
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Kavli Energy Nanoscience Institute, Berkeley, California 94720, United States
| | - Collin J. Steen
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Kavli Energy Nanoscience Institute, Berkeley, California 94720, United States
| | - Masakazu Iwai
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Howard Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, California 94720, United States
| | - Jonathan M. Morris
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Kavli Energy Nanoscience Institute, Berkeley, California 94720, United States
| | - Peter Jomo Walla
- Kavli Energy Nanoscience Institute, Berkeley, California 94720, United States
- Department for Biophysical Chemistry, Technische Universität Braunschweig, Institute for Physical and Theoretical Chemistry, Hans-Sommer-Strasse 10, 38106 Braunschweig, Germany
- Department of Neurobiology, Research Group Biomolecular Spectroscopy and Single Molecule Detection, Max Planck Institute for Biophysical Chemistry, Am Fassberg 11, 37077 Göttingen, Germany
| | - Krishna K. Niyogi
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Howard Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, California 94720, United States
| | - Graham R. Fleming
- Department of Chemistry, University of California, Berkeley, California 94720, United States
- Molecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States
- Kavli Energy Nanoscience Institute, Berkeley, California 94720, United States
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15
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Tejeda-Ferrari ME, Brown CL, Coutinho GCCC, Gomes de Sá GA, Palma JL, Llansola-Portoles MJ, Kodis G, Mujica V, Ho J, Gust D, Moore TA, Moore AL. Electronic Structure and Triplet-Triplet Energy Transfer in Artificial Photosynthetic Antennas. Photochem Photobiol 2018; 95:211-219. [DOI: 10.1111/php.12979] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2018] [Accepted: 06/28/2018] [Indexed: 01/21/2023]
Affiliation(s)
| | - Chelsea L. Brown
- School of Molecular Sciences; Arizona State University; Tempe AZ
| | | | | | - Julio L. Palma
- Department of Chemistry; The Pennsylvania State University; Lemont Furnace PA
| | - Manuel J. Llansola-Portoles
- Institute for Integrative Biology of the Cell (I2BC); CEA; CNRS; Université Paris-Saclay; Gif-sur-Yvette Cedex France
| | - Gerdenis Kodis
- School of Molecular Sciences; Arizona State University; Tempe AZ
| | - Vladimiro Mujica
- School of Molecular Sciences; Arizona State University; Tempe AZ
| | - Junming Ho
- School of Chemistry; University of New South Wales; Sydney NSW Australia
| | - Devens Gust
- School of Molecular Sciences; Arizona State University; Tempe AZ
| | - Thomas A. Moore
- School of Molecular Sciences; Arizona State University; Tempe AZ
| | - Ana L. Moore
- School of Molecular Sciences; Arizona State University; Tempe AZ
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16
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Hontani Y, Kloz M, Polívka T, Shukla MK, Sobotka R, Kennis JTM. Molecular Origin of Photoprotection in Cyanobacteria Probed by Watermarked Femtosecond Stimulated Raman Spectroscopy. J Phys Chem Lett 2018; 9:1788-1792. [PMID: 29569927 PMCID: PMC5942868 DOI: 10.1021/acs.jpclett.8b00663] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
Abstract
Photoprotection is fundamental in photosynthesis to avoid oxidative photodamage upon excess light exposure. Excited chlorophylls (Chl) are quenched by carotenoids, but the precise molecular origin remains controversial. The cyanobacterial HliC protein belongs to the Hlip family ancestral to plant light-harvesting complexes, and binds Chl a and β-carotene in 2:1 ratio. We analyzed HliC by watermarked femtosecond stimulated Raman spectroscopy to follow the time evolution of its vibrational modes. We observed a 2 ps rise of the C═C stretch band of the 2Ag- (S1) state of β-carotene upon Chl a excitation, demonstrating energy transfer quenching and fast excess-energy dissipation. We detected two distinct β-carotene conformers by the C═C stretch frequency of the 2Ag- (S1) state, but only the β-carotene whose 2Ag- energy level is significantly lowered and has a lower C═C stretch frequency is involved in quenching. It implies that the low carotenoid S1 energy that results from specific pigment-protein or pigment-pigment interactions is the key property for creating a dissipative energy channel. We conclude that watermarked femtosecond stimulated Raman spectroscopy constitutes a promising experimental method to assess energy transfer and quenching mechanisms in oxygenic photosynthesis.
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Affiliation(s)
- Yusaku Hontani
- Department
of Physics and Astronomy, Vrije Universiteit, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Miroslav Kloz
- Department
of Physics and Astronomy, Vrije Universiteit, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
- ELI-Beamlines, Institute of Physics, Na Slovance 2, 182 21 Praha 8, Czech Republic
| | - Tomáš Polívka
- Institute
of Physics and Biophysics, Faculty of Science, University of South Bohemia, 370 05 České Budějovice, Czech Republic
| | - Mahendra K. Shukla
- Centre
Algatech, Institute of Microbiology, Academy
of Sciences of the Czech Republic, Třeboň, 379 81, Czech Republic
| | - Roman Sobotka
- Centre
Algatech, Institute of Microbiology, Academy
of Sciences of the Czech Republic, Třeboň, 379 81, Czech Republic
| | - John T. M. Kennis
- Department
of Physics and Astronomy, Vrije Universiteit, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
- E-mail:
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17
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Abdurrahmanoğlu Ş, Canlıca M, Mack J, Nyokong T. Pyridone substituted phthalocyanines: Photophysico-chemical properties and TD-DFT calculations. J PORPHYR PHTHALOCYA 2018. [DOI: 10.1142/s1088424617500730] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
4-(6-methyl-3-nitro-2-oxo-1,2-dihydropyridin-4-yloxy)phthalonitrile has been used to prepare a novel Zn(II) phthalocyanines with four peripheral pyridone substituents. The compound has been characterized by UV-visible absorption, FT-IR and [Formula: see text]H-NMR spectroscopy, elemental analysis and MALDI-TOF mass spectroscopy. The fluorescence, triplet quantum and singlet oxygen quantum yields have been determined and TD-DFT calculations have been used to identify trends in the electronic structure.
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Affiliation(s)
| | - Mevlüde Canlıca
- Department of Chemistry, Yildiz Technical University, Davutpasa Campus, Esenler, Istanbul, 34220, Turkey
| | - John Mack
- Centre for Nanotechnology Innovation, Department of Chemistry, Rhodes University, Grahamstown 6140, South Africa
| | - Tebello Nyokong
- Centre for Nanotechnology Innovation, Department of Chemistry, Rhodes University, Grahamstown 6140, South Africa
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18
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van Oort B, Roy LM, Xu P, Lu Y, Karcher D, Bock R, Croce R. Revisiting the Role of Xanthophylls in Nonphotochemical Quenching. J Phys Chem Lett 2018; 9:346-352. [PMID: 29251936 DOI: 10.1021/acs.jpclett.7b03049] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/17/2023]
Abstract
Photoprotective nonphotochemical quenching (NPQ) of absorbed solar energy is vital for survival of photosynthetic organisms, and NPQ modifications significantly improve plant productivity. However, the exact NPQ quenching mechanism is obscured by discrepancies between reported mechanisms, involving xanthophyll-chlorophyll (Xan-Chl) and Chl-Chl interactions. We present evidence of an experimental artifact that may explain the discrepancies: strong laser pulses lead to the formation of a novel electronic species in the major plant light-harvesting complex (LHCII). This species evolves from a high excited state of Chl a and is absent with weak laser pulses. It resembles an excitonically coupled heterodimer of Chl a and lutein (or other Xans at site L1) and acts as a de-excitation channel. Laser powers, and consequently amounts of artifact, vary strongly between NPQ studies, thereby explaining contradicting spectral signatures attributed to NPQ. Our results offer pathways toward unveiling NPQ mechanisms and highlight the necessity of careful attention to laser-induced artifacts.
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Affiliation(s)
- Bart van Oort
- Biophysics of Photosynthesis, Department of Physics and Astronomy, Faculty of Sciences, and LaserLaB Amsterdam, Vrije Universiteit Amsterdam , 1081 HV Amsterdam, The Netherlands
| | - Laura M Roy
- Biophysics of Photosynthesis, Department of Physics and Astronomy, Faculty of Sciences, and LaserLaB Amsterdam, Vrije Universiteit Amsterdam , 1081 HV Amsterdam, The Netherlands
| | - Pengqi Xu
- Biophysics of Photosynthesis, Department of Physics and Astronomy, Faculty of Sciences, and LaserLaB Amsterdam, Vrije Universiteit Amsterdam , 1081 HV Amsterdam, The Netherlands
| | - Yinghong Lu
- Max-Planck-Institut für Molekulare Pflanzenphysiologie Wissenschaftspark Golm , Am Mühlenberg 1, 14476 Potsdam-Golm, Germany
| | - Daniel Karcher
- Max-Planck-Institut für Molekulare Pflanzenphysiologie Wissenschaftspark Golm , Am Mühlenberg 1, 14476 Potsdam-Golm, Germany
| | - Ralph Bock
- Max-Planck-Institut für Molekulare Pflanzenphysiologie Wissenschaftspark Golm , Am Mühlenberg 1, 14476 Potsdam-Golm, Germany
| | - Roberta Croce
- Biophysics of Photosynthesis, Department of Physics and Astronomy, Faculty of Sciences, and LaserLaB Amsterdam, Vrije Universiteit Amsterdam , 1081 HV Amsterdam, The Netherlands
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19
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Fritsche S, Wang X, Jung C. Recent Advances in our Understanding of Tocopherol Biosynthesis in Plants: An Overview of Key Genes, Functions, and Breeding of Vitamin E Improved Crops. Antioxidants (Basel) 2017; 6:E99. [PMID: 29194404 PMCID: PMC5745509 DOI: 10.3390/antiox6040099] [Citation(s) in RCA: 75] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2017] [Revised: 11/19/2017] [Accepted: 11/23/2017] [Indexed: 12/17/2022] Open
Abstract
Tocopherols, together with tocotrienols and plastochromanols belong to a group of lipophilic compounds also called tocochromanols or vitamin E. Considered to be one of the most powerful antioxidants, tocochromanols are solely synthesized by photosynthetic organisms including plants, algae, and cyanobacteria and, therefore, are an essential component in the human diet. Tocochromanols potent antioxidative properties are due to their ability to interact with polyunsaturated acyl groups and scavenge lipid peroxyl radicals and quench reactive oxygen species (ROS), thus protecting fatty acids from lipid peroxidation. In the plant model species Arabidopsis thaliana, the required genes for tocopherol biosynthesis and functional roles of tocopherols were elucidated in mutant and transgenic plants. Recent research efforts have led to new outcomes for the vitamin E biosynthetic and related pathways, and new possible alternatives for the biofortification of important crops have been suggested. Here, we review 30 years of research on tocopherols in model and crop species, with emphasis on the improvement of vitamin E content using transgenic approaches and classical breeding. We will discuss future prospects to further improve the nutritional value of our food.
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Affiliation(s)
- Steffi Fritsche
- Plant Breeding Institute, Christian-Albrechts-University of Kiel, 24118 Kiel, Germany.
| | - Xingxing Wang
- Plant Breeding Institute, Christian-Albrechts-University of Kiel, 24118 Kiel, Germany.
- Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Anyang 455000, China.
| | - Christian Jung
- Plant Breeding Institute, Christian-Albrechts-University of Kiel, 24118 Kiel, Germany.
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20
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Wolf M, Villegas C, Trukhina O, Delgado JL, Torres T, Martín N, Clark T, Guldi DM. Mediating Reductive Charge Shift Reactions in Electron Transport Chains. J Am Chem Soc 2017; 139:17474-17483. [DOI: 10.1021/jacs.7b08670] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
- Maximilian Wolf
- Department of Chemistry and Pharmacy & Interdisciplinary Center of Molecular Materials (ICMM), Friedrich-Alexander-University Erlangen-Nuremberg, Egerlandstr. 3, 91058 Erlangen, Germany
| | - Carmen Villegas
- Departamento
de Química Orgánica, Facultad de Ciencias Químicas, Universidad Complutense de Madrid, Ciudad Universitaria s/n, 28040 Madrid, Spain
| | - Olga Trukhina
- Departamento
de Química Orgánica, Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain
- Imdea-Nanoscience, C/Faraday 9, Campus Cantoblanco, 28049 Madrid, Spain
| | - Juan Luis Delgado
- Faculty of Chemistry & POLYMAT, University of the Basque Country UPV/EHU, Avenida de Tolosa 72, 20018 Donostia-San Sebastian, Spain
- Ikerbasque, Basque Foundation for Science, 48011 Bilbao, Spain
| | - Tomás Torres
- Departamento
de Química Orgánica, Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain
- Imdea-Nanoscience, C/Faraday 9, Campus Cantoblanco, 28049 Madrid, Spain
- Institute
for Advanced Research in Chemical Sciences (IAdChem), Universidad Autónoma de Madrid, Cantoblanco, 28049 Madrid, Spain
| | - Nazario Martín
- Departamento
de Química Orgánica, Facultad de Ciencias Químicas, Universidad Complutense de Madrid, Ciudad Universitaria s/n, 28040 Madrid, Spain
- Imdea-Nanoscience, C/Faraday 9, Campus Cantoblanco, 28049 Madrid, Spain
| | - Timothy Clark
- Department
of Chemistry and Pharmacy, Computer Chemistry Centre (CCC), Friedrich-Alexander-University Erlangen-Nuremberg, Nägelsbachstraße 25, 91052 Erlangen, Germany
| | - Dirk M. Guldi
- Department of Chemistry and Pharmacy & Interdisciplinary Center of Molecular Materials (ICMM), Friedrich-Alexander-University Erlangen-Nuremberg, Egerlandstr. 3, 91058 Erlangen, Germany
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21
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Gacek DA, Moore AL, Moore TA, Walla PJ. Two-Photon Spectra of Chlorophylls and Carotenoid–Tetrapyrrole Dyads. J Phys Chem B 2017; 121:10055-10063. [DOI: 10.1021/acs.jpcb.7b08502] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Daniel A. Gacek
- Technische Universität Braunschweig, Institute for Physical and Theoretical Chemistry, Department of Biophysical
Chemistry, Gaußstraße.
17, 38106 Braunschweig, Germany
| | - Ana L. Moore
- School
of Molecular Sciences and Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, Arizona 85287-1604, United States
| | - Thomas A. Moore
- School
of Molecular Sciences and Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, Arizona 85287-1604, United States
| | - Peter Jomo Walla
- Technische Universität Braunschweig, Institute for Physical and Theoretical Chemistry, Department of Biophysical
Chemistry, Gaußstraße.
17, 38106 Braunschweig, Germany
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22
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Mızrak B, Ağar M, Altindal A, Abdurrahmanoğlu Ş. Synthesis, characterization and metal ion sensing properties of novel pyridone derivatives phthalocyanines. J PORPHYR PHTHALOCYA 2017. [DOI: 10.1142/s1088424616501200] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
The design of novel substituted phthalocyanines closely follows the requirement of their planned applications. In this study, synthesize of novel pyridone derivatives metal-free and symmetrical cobalt(II) phthalocyanines was carried out to improve brightness. For this purpose; starting with 4-nitrophthalonitrile and 4-hydroxy-6-methyl-3-nitro-2-pyridone, 4-(6-methyl-3-nitro-2-oxo-1,2-dihydropyridin-4-yloxy)phthalonitrile was prepared. Then 2(3),9(10),16(17),23(24)-tetrakis[6-methyl-3-nitro-2-oxo-1,2-dihydropyridin-4-yloxy] metal-free phthalocyaninato and 2(3),9(10), 16(17),23(24)-tetrakis[6-methyl-3-nitro-2-oxo-1,2-dihydropyridin-4-yloxy] phthalocyaninato Co(II) were synthesized by using 4-(6-methyl-3-nitro-2-oxo-1,2-dihydropyridin-4-yloxy)phthalonitrile, lithium metal and cobalt(II) acetate tetrahydrate in amyl alcohol, respectively. The sensing behavior of the film of derivatives metal-free and symmetrical cobalt(II) phthalocyanines for the online detection of heavy metal ions in water samples was investigated by utilizing an AT-cut quartz crystal resonator. It was observed that the adsorption of the analytes on the coating surface cause a reversible negative frequency shift of the resonator. Quartz crystal microbalance (QCM) functionalized with phthalocyanine, derivatives metal-free and symmetrical cobalt(II) phthalocyanines, are demonstrated to be sensors for the detection of heavy metal ions like Cd[Formula: see text], Zn[Formula: see text], Cu[Formula: see text], Cr[Formula: see text] and Co[Formula: see text]. Thus, QCM based sensor arrays are considered a promising platform for the direct analysis of aqueous samples.
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Affiliation(s)
- Büşra Mızrak
- Department of Chemistry, Marmara University, Fen-Edebiyat Fakültesi, Kimya Bölümü Kadıköy, Istanbul 34722, Turkey
| | - Meltem Ağar
- Department of Mathematics and Computer, İstanbul Arel University, Büyükçekmece, Istanbul, Turkey
| | - Ahmet Altindal
- Department of Mathematics and Computer, İstanbul Arel University, Büyükçekmece, Istanbul, Turkey
| | - Şaziye Abdurrahmanoğlu
- Department of Chemistry, Marmara University, Fen-Edebiyat Fakültesi, Kimya Bölümü Kadıköy, Istanbul 34722, Turkey
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23
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Abstract
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Pd-catalyzed
cross-coupling reactions that form C–N bonds
have become useful methods to synthesize anilines and aniline derivatives,
an important class of compounds throughout chemical research. A key
factor in the widespread adoption of these methods has been the continued
development of reliable and versatile catalysts that function under
operationally simple, user-friendly conditions. This review provides
an overview of Pd-catalyzed N-arylation reactions found in both basic
and applied chemical research from 2008 to the present. Selected examples
of C–N cross-coupling reactions between nine classes of nitrogen-based
coupling partners and (pseudo)aryl halides are described for the synthesis
of heterocycles, medicinally relevant compounds, natural products,
organic materials, and catalysts.
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Affiliation(s)
- Paula Ruiz-Castillo
- Department of Chemistry, Massachusetts Institute of Technology , Cambridge, Massachusetts 02139, United States
| | - Stephen L Buchwald
- Department of Chemistry, Massachusetts Institute of Technology , Cambridge, Massachusetts 02139, United States
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24
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Dilbeck PL, Tang Q, Mothersole DJ, Martin EC, Hunter CN, Bocian DF, Holten D, Niedzwiedzki DM. Quenching Capabilities of Long-Chain Carotenoids in Light-Harvesting-2 Complexes from Rhodobacter sphaeroides with an Engineered Carotenoid Synthesis Pathway. J Phys Chem B 2016; 120:5429-43. [PMID: 27285777 PMCID: PMC4921951 DOI: 10.1021/acs.jpcb.6b03305] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
![]()
Six light-harvesting-2 complexes
(LH2) from genetically modified
strains of the purple photosynthetic bacterium Rhodobacter
(Rb.) sphaeroides were studied using static and ultrafast
optical methods and resonance Raman spectroscopy. These strains were
engineered to incorporate carotenoids for which the number of conjugated
groups (N = NC=C + NC=O) varies from 9 to 15.
The Rb. sphaeroides strains incorporate their native
carotenoids spheroidene (N = 10) and spheroidenone
(N = 11), as well as longer-chain analogues including
spirilloxanthin (N = 13) and diketospirilloxantion
(N = 15) normally found in Rhodospirillum
rubrum. Measurements of the properties of the carotenoid
first singlet excited state (S1) in antennas from the Rb. sphaeroides set show that carotenoid-bacteriochlorophyll a (BChl a) interactions are similar to
those in LH2 complexes from various other bacterial species and thus
are not significantly impacted by differences in polypeptide composition.
Instead, variations in carotenoid-to-BChl a energy
transfer are primarily regulated by the N-determined
energy of the carotenoid S1 excited state, which for long-chain
(N ≥ 13) carotenoids is not involved in energy
transfer. Furthermore, the role of the long-chain carotenoids switches
from a light-harvesting supporter (via energy transfer to BChl a) to a quencher of the BChl a S1 excited state B850*. This quenching is manifested as a substantial
(∼2-fold) reduction of the B850* lifetime and the B850* fluorescence
quantum yield for LH2 housing the longest carotenoids.
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Affiliation(s)
| | - Qun Tang
- Department of Chemistry, University of California Riverside , Riverside, California 92521, United States
| | - David J Mothersole
- Department of Molecular Biology and Biotechnology, University of Sheffield , Sheffield S10 2TN, United Kingdom
| | - Elizabeth C Martin
- Department of Molecular Biology and Biotechnology, University of Sheffield , Sheffield S10 2TN, United Kingdom
| | - C Neil Hunter
- Department of Molecular Biology and Biotechnology, University of Sheffield , Sheffield S10 2TN, United Kingdom
| | - David F Bocian
- Department of Chemistry, University of California Riverside , Riverside, California 92521, United States
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25
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Zhu H, Li Y, Chen J, Zhou M, Niu Y, Zhang X, Guo Q, Wang S, Yang G, Xia A. Excited-State Deactivation of Branched Phthalocyanine Compounds. Chemphyschem 2015; 16:3893-901. [DOI: 10.1002/cphc.201500738] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2015] [Revised: 09/29/2015] [Indexed: 01/22/2023]
Affiliation(s)
- Huaning Zhu
- Beijing National Laboratory for Molecular Sciences (BNLMS) and Key Laboratory of Photochemistry; Institute of Chemistry; Chinese Academy of Sciences; Bejing 100190 China
| | - Yang Li
- Beijing National Laboratory for Molecular Sciences (BNLMS) and Key Laboratory of Photochemistry; Institute of Chemistry; Chinese Academy of Sciences; Bejing 100190 China
| | - Jun Chen
- Beijing National Laboratory for Molecular Sciences (BNLMS) and Key Laboratory of Photochemistry; Institute of Chemistry; Chinese Academy of Sciences; Bejing 100190 China
- School of Materials Science and Engineering; Jiangxi University of Science and Technology; Ganzhou 341000 China
| | - Meng Zhou
- Beijing National Laboratory for Molecular Sciences (BNLMS) and Key Laboratory of Photochemistry; Institute of Chemistry; Chinese Academy of Sciences; Bejing 100190 China
| | - Yingli Niu
- Beijing National Laboratory for Molecular Sciences (BNLMS) and Key Laboratory of Photochemistry; Institute of Chemistry; Chinese Academy of Sciences; Bejing 100190 China
| | - Xinxing Zhang
- Beijing National Laboratory for Molecular Sciences (BNLMS) and Key Laboratory of Photochemistry; Institute of Chemistry; Chinese Academy of Sciences; Bejing 100190 China
| | - Qianjin Guo
- Beijing National Laboratory for Molecular Sciences (BNLMS) and Key Laboratory of Photochemistry; Institute of Chemistry; Chinese Academy of Sciences; Bejing 100190 China
| | - Shuangqing Wang
- Beijing National Laboratory for Molecular Sciences (BNLMS) and Key Laboratory of Photochemistry; Institute of Chemistry; Chinese Academy of Sciences; Bejing 100190 China
| | - Guoqiang Yang
- Beijing National Laboratory for Molecular Sciences (BNLMS) and Key Laboratory of Photochemistry; Institute of Chemistry; Chinese Academy of Sciences; Bejing 100190 China
| | - Andong Xia
- Beijing National Laboratory for Molecular Sciences (BNLMS) and Key Laboratory of Photochemistry; Institute of Chemistry; Chinese Academy of Sciences; Bejing 100190 China
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26
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Ravensbergen J, Antoniuk-Pablant A, Sherman BD, Kodis G, Megiatto JD, Méndez-Hernández DD, Frese RN, van Grondelle R, Moore TA, Moore AL, Gust D, Kennis JTM. Spectroscopic Analysis of a Biomimetic Model of TyrZ Function in PSII. J Phys Chem B 2015; 119:12156-63. [DOI: 10.1021/acs.jpcb.5b05298] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Janneke Ravensbergen
- Department
of Physics and Astronomy, Faculty of Sciences, VU University, De Boelelaan
1081, 1081 HV Amsterdam, The Netherlands
| | - Antaeres Antoniuk-Pablant
- Department of Chemistry & Biochemistry and Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, Arizona 85287-1605, United States
| | - Benjamin D. Sherman
- Department of Chemistry & Biochemistry and Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, Arizona 85287-1605, United States
| | - Gerdenis Kodis
- Department of Chemistry & Biochemistry and Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, Arizona 85287-1605, United States
| | - Jackson D. Megiatto
- Department of Chemistry & Biochemistry and Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, Arizona 85287-1605, United States
| | - Dalvin D. Méndez-Hernández
- Department of Chemistry & Biochemistry and Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, Arizona 85287-1605, United States
| | - Raoul N. Frese
- Department
of Physics and Astronomy, Faculty of Sciences, VU University, De Boelelaan
1081, 1081 HV Amsterdam, The Netherlands
| | - Rienk van Grondelle
- Department
of Physics and Astronomy, Faculty of Sciences, VU University, De Boelelaan
1081, 1081 HV Amsterdam, The Netherlands
| | - Thomas A. Moore
- Department of Chemistry & Biochemistry and Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, Arizona 85287-1605, United States
| | - Ana L. Moore
- Department of Chemistry & Biochemistry and Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, Arizona 85287-1605, United States
| | - Devens Gust
- Department of Chemistry & Biochemistry and Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, Arizona 85287-1605, United States
| | - John T. M. Kennis
- Department
of Physics and Astronomy, Faculty of Sciences, VU University, De Boelelaan
1081, 1081 HV Amsterdam, The Netherlands
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27
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Xu P, Tian L, Kloz M, Croce R. Molecular insights into Zeaxanthin-dependent quenching in higher plants. Sci Rep 2015; 5:13679. [PMID: 26323786 PMCID: PMC4555179 DOI: 10.1038/srep13679] [Citation(s) in RCA: 79] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2015] [Accepted: 08/03/2015] [Indexed: 11/14/2022] Open
Abstract
Photosynthetic organisms protect themselves from high-light stress by dissipating excess absorbed energy as heat in a process called non-photochemical quenching (NPQ). Zeaxanthin is essential for the full development of NPQ, but its role remains debated. The main discussion revolves around two points: where does zeaxanthin bind and does it quench? To answer these questions we have followed the zeaxanthin-dependent quenching from leaves to individual complexes, including supercomplexes. We show that small amounts of zeaxanthin are associated with the complexes, but in contrast to what is generally believed, zeaxanthin binding per se does not cause conformational changes in the complexes and does not induce quenching, not even at low pH. We show that in NPQ conditions zeaxanthin does not exchange for violaxanthin in the internal binding sites of the antennas but is located at the periphery of the complexes. These results together with the observation that the zeaxanthin-dependent quenching is active in isolated membranes, but not in functional supercomplexes, suggests that zeaxanthin is acting in between the complexes, helping to create/participating in a variety of quenching sites. This can explain why none of the antennas appears to be essential for NPQ and the multiple quenching mechanisms that have been observed in plants.
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Affiliation(s)
- Pengqi Xu
- Biophysics of Photosynthesis, Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam and LaserLab Amsterdam. De Boelelaan, 1081, 1081 HV, Amsterdam, The Netherlands
| | - Lijin Tian
- Biophysics of Photosynthesis, Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam and LaserLab Amsterdam. De Boelelaan, 1081, 1081 HV, Amsterdam, The Netherlands
| | - Miroslav Kloz
- Biophysics of Photosynthesis, Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam and LaserLab Amsterdam. De Boelelaan, 1081, 1081 HV, Amsterdam, The Netherlands
| | - Roberta Croce
- Biophysics of Photosynthesis, Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam and LaserLab Amsterdam. De Boelelaan, 1081, 1081 HV, Amsterdam, The Netherlands
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28
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Vijayalakshmi K, Jha A, Dasgupta J. Ultrafast Triplet Generation and its Sensitization Drives Efficient Photoisomerization of Tetra-cis-lycopene to All-trans-lycopene. J Phys Chem B 2015; 119:8669-78. [DOI: 10.1021/acs.jpcb.5b02086] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
| | - Ajay Jha
- Department of Chemical Sciences, Tata Institute of Fundamental Research, Mumbai-400005, India
| | - Jyotishman Dasgupta
- Department of Chemical Sciences, Tata Institute of Fundamental Research, Mumbai-400005, India
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29
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Stadnichuk IN, Krasilnikov PM, Zlenko DV, Freidzon AY, Yanyushin MF, Rubin AB. Electronic coupling of the phycobilisome with the orange carotenoid protein and fluorescence quenching. PHOTOSYNTHESIS RESEARCH 2015; 124:315-335. [PMID: 25948498 DOI: 10.1007/s11120-015-0148-3] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/18/2014] [Accepted: 04/18/2015] [Indexed: 06/04/2023]
Abstract
Using computational modeling and known 3D structure of proteins, we arrived at a rational spatial model of the orange carotenoid protein (OCP) and phycobilisome (PBS) interaction in the non-photochemical fluorescence quenching. The site of interaction is formed by the central cavity of the OCP monomer in the capacity of a keyhole to the characteristic external tip of the phycobilin-containing domain (PB) and folded loop of the core-membrane linker LCM within the PBS core. The same central protein cavity was shown to be also the site of the OCP and fluorescence recovery protein (FRP) interaction. The revealed geometry of the OCP to the PBLCM attachment is believed to be the most advantageous one as the LCM, being the major terminal PBS fluorescence emitter, gathers, before quenching by OCP, the energy from most other phycobilin chromophores of the PBS. The distance between centers of mass of the OCP carotenoid 3'-hydroxyechinenone (hECN) and the adjacent phycobilin chromophore of the PBLCM was determined to be 24.7 Å. Under the dipole-dipole approximation, from the point of view of the determined mutual orientation and the values of the transition dipole moments and spectral characteristics of interacting chromophores, the time of the direct energy transfer from the phycobilin of PBLCM to the S1 excited state of hECN was semiempirically calculated to be 36 ps, which corresponds to the known experimental data and implies the OCP is a very efficient energy quencher. The complete scheme of OCP and PBS interaction that includes participation of the FRP is proposed.
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Affiliation(s)
- Igor N Stadnichuk
- K. A. Timiryazev Institute of Plant Physiology RAS, Botanicheskaya, 35, 127726, Moscow, Russia
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30
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van Oort B, van Grondelle R, van Stokkum IHM. A Hidden State in Light-Harvesting Complex II Revealed By Multipulse Spectroscopy. J Phys Chem B 2015; 119:5184-93. [PMID: 25815531 PMCID: PMC4500649 DOI: 10.1021/acs.jpcb.5b01335] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2015] [Revised: 03/23/2015] [Indexed: 11/28/2022]
Abstract
Light-harvesting complex II (LHCII) is pivotal both for collecting solar radiation for photosynthesis, and for protection against photodamage under high light intensities (via a process called nonphotochemical quenching, NPQ). Aggregation of LHCII is associated with fluorescence quenching, and is used as an in vitro model system of NPQ. However, there is no agreement on the nature of the quencher and on the validity of aggregation as a model system. Here, we use ultrafast multipulse spectroscopy to populate a quenched state in unquenched (unaggregated) LHCII. The state shows characteristic features of lutein and chlorophyll, suggesting that it is an excitonically coupled state between these two compounds. This state decays in approximately 10 ps, making it a strong competitor for photodamage and photochemical quenching. It is observed in trimeric and monomeric LHCII, upon re-excitation with pulses of different wavelengths and duration. We propose that this state is always present, but is scarcely populated under low light intensities. Under high light intensities it may become more accessible, e.g. by conformational changes, and then form a quenching channel. The same state may be the cause of fluorescence blinking observed in single-molecule spectroscopy of LHCII trimers, where a small subpopulation is in an energetically higher state where the pathway to the quencher opens up.
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Affiliation(s)
- Bart van Oort
- Department
of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
- Institute
for Lasers, Life and Biophotonics, Faculty of Sciences, VU University Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Rienk van Grondelle
- Department
of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
- Institute
for Lasers, Life and Biophotonics, Faculty of Sciences, VU University Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
| | - Ivo H. M. van Stokkum
- Department
of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
- Institute
for Lasers, Life and Biophotonics, Faculty of Sciences, VU University Amsterdam, De Boelelaan 1081, 1081 HV Amsterdam, The Netherlands
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31
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Curti C, Sartori A, Battistini L, Brindani N, Rassu G, Pelosi G, Lodola A, Mor M, Casiraghi G, Zanardi F. Pushing the boundaries of vinylogous reactivity: catalytic enantioselective mukaiyama aldol reactions of highly unsaturated 2-silyloxyindoles. Chemistry 2015; 21:6433-42. [PMID: 25735832 DOI: 10.1002/chem.201500083] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2015] [Indexed: 11/11/2022]
Abstract
The first example of catalytic, enantioselective hypervinylogous Mukaiyama aldol reaction (HVMAR) involving multiply unsaturated 2-silyloxyindoles is reported. The reaction utilizes a chiral Lewis base-catalyzed Lewis acid-mediated technology to deliver homoallylic 3-polyenylidene 2-oxindoles with extraordinary levels of regio-, enantio-, and geometrical selectivity. This work highlights a subtle yet decisive influence of the indole N-substituents on the propagation of the vinylogous reactivity space of the donor substrates up to ten bonds away from the origin of the vinylogy effect. Analysis of the (13) C NMR chemical shifts of the C-ω remote site within homologous silyloxyindole donors enabled rationalization of the results and easy qualitative prediction of the HVMAR reactivity/inertia toward a given aldehyde acceptor.
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Affiliation(s)
- Claudio Curti
- Dipartimento di Farmacia, Università degli Studi di Parma, Parco Area delle Scienze 27 A, 43124 Parma (Italy), Fax: (+39) 0521-905006.
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32
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Fuciman M, Keşan G, LaFountain AM, Frank HA, Polívka T. Tuning the spectroscopic properties of aryl carotenoids by slight changes in structure. J Phys Chem B 2015; 119:1457-67. [PMID: 25558974 DOI: 10.1021/jp512354r] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Abstract
Two carotenoids with aryl rings were studied by femtosecond transient absorption spectroscopy and theoretical computational methods, and the results were compared with those obtained from their nonaryl counterpart, β-carotene. Although isorenieratene has more conjugated C═C bonds than β-carotene, its effective conjugation length, Neff, is shorter than of β-carotene. This is evidenced by a longer S1 lifetime and higher S1 energy of isorenieratene compared to the values for β-carotene. On the other hand, although isorenieratene and renierapurpurin have the same π-electron conjugated chain structure, Neff is different for these two carotenoids. The S1 lifetime of renierapurpurin is shorter than that of isorenieratene, indicating a longer Neff for renierapurpurin. This conclusion is also consistent with a lower S1 energy of renierapurpurin compared to those of the other carotenoids. Density functional theory (DFT) was used to calculate equilibrium geometries of ground and excited states of all studied carotenoids. The terminal ring torsion in the ground state of isorenieratene (41°) is very close to that of β-carotene (45°), but equilibration of the bond lengths within the aryl rings indicates that the each aryl ring forms its own conjugated system. This results in partial detachment of the aryl rings from the overall conjugation making Neff of isorenieratene shorter than that of β-carotene. The different position of the methyl group at the aryl ring of renierapurpurin diminishes the aryl ring torsion to ∼20°. This planarization results in a longer Neff than that of isorenieratene, rationalizing the observed differences in spectroscopic properties.
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Affiliation(s)
- Marcel Fuciman
- Institute of Physics and Biophysics, Faculty of Science, University of South Bohemia , Branišovská 1760, 37005 České Budějovice, Czech Republic
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33
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Ramanan C, Berera R, Gundermann K, van Stokkum I, Büchel C, van Grondelle R. Exploring the mechanism(s) of energy dissipation in the light harvesting complex of the photosynthetic algae Cyclotella meneghiniana. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2014; 1837:1507-13. [PMID: 24576451 DOI: 10.1016/j.bbabio.2014.02.016] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2013] [Revised: 02/10/2014] [Accepted: 02/16/2014] [Indexed: 10/25/2022]
Abstract
Photosynthetic organisms have developed vital strategies which allow them to switch from a light-harvesting to an energy dissipative state at the level of the antenna system in order to survive the detrimental effects of excess light illumination. These mechanisms are particularly relevant in diatoms, which grow in highly fluctuating light environments and thus require fast and strong response to changing light conditions. We performed transient absorption spectroscopy on FCPa, the main light-harvesting antenna from the diatom Cyclotella meneghiniana, in the unquenched and quenched state. Our results show that in quenched FCPa two quenching channels are active and are characterized by differing rate constants and distinct spectroscopic signatures. One channel is associated with a faster quenching rate (16ns⁻¹) and virtually no difference in spectral shape compared to the bulk unquenched chlorophylls, while a second channel is associated with a slower quenching rate (2.7ns⁻¹) and exhibits an increased population of red-emitting states. We discuss the origin of the two processes in the context of the models proposed for the regulation of photosynthetic light-harvesting. This article is part of a special issue entitled: photosynthesis research for sustainability: keys to produce clean energy.
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Affiliation(s)
- Charusheela Ramanan
- Division of Biophysics, Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam, The Netherlands.
| | - Rudi Berera
- Division of Biophysics, Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam, The Netherlands.
| | - Kathi Gundermann
- Institute of Molecular Biosciences, Goethe University Frankfurt, Frankfurt, Germany
| | - Ivo van Stokkum
- Division of Biophysics, Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam, The Netherlands
| | - Claudia Büchel
- Institute of Molecular Biosciences, Goethe University Frankfurt, Frankfurt, Germany
| | - Rienk van Grondelle
- Division of Biophysics, Department of Physics and Astronomy, Faculty of Sciences, VU University Amsterdam, The Netherlands
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34
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Holleboom CP, Walla PJ. The back and forth of energy transfer between carotenoids and chlorophylls and its role in the regulation of light harvesting. PHOTOSYNTHESIS RESEARCH 2014; 119:215-21. [PMID: 23575737 DOI: 10.1007/s11120-013-9815-4] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2012] [Accepted: 03/16/2013] [Indexed: 05/05/2023]
Abstract
Many aspects in the regulation of photosynthetic light-harvesting of plants are still quite poorly understood. For example, it is still a matter of debate which physical mechanism(s) results in the regulation and dissipation of excess energy in high light. Many researchers agree that electronic interactions between chlorophylls (Chl) and certain states of carotenoids are involved in these mechanisms. However, in particular, the role of the first excited state of carotenoids (Car S1) is not easily revealed, because of its optical forbidden character. The use of two-photon excitation is an elegant approach to address directly this state and to investigate the energy transfer in the direction Car S1 → Chl. Meanwhile, it has been applied to a large variety of systems starting from simple carotenoid-tetrapyrrole model compounds up to entire plants. Here, we present a systematic summary of the observations obtained by two-photon excitation about Car S1 → Chl energy transfer in systems with increasing complexity and the correlation to fluorescence quenching. We compare these observations directly with the energy transfer in the opposite direction, Chl → Car S1, for the same systems as obtained in pump-probe studies. We discuss what surprising aspects of this comparison led us to the suggestion that quenching excitonic Car-Chl interactions could contribute to the regulation of light harvesting, and how this suggestion can be connected to other models proposed.
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Affiliation(s)
- Christoph-Peter Holleboom
- Department for Biophysical Chemistry, Institute for Physical and Theoretical Chemistry, Technische Universität Braunschweig, Hans-Sommer-Str. 10, 38106, Braunschweig, Germany
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35
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Springer JW, Taniguchi M, Krayer M, Ruzié C, Diers JR, Niedzwiedzki DM, Bocian DF, Lindsey JS, Holten D. Photophysical properties and electronic structure of retinylidene–chlorin–chalcones and analogues. Photochem Photobiol Sci 2014; 13:634-50. [DOI: 10.1039/c3pp50421b] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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36
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Iengo E, Cavigli P, Gamberoni M, Indelli MT. A Selective Metal-Mediated Approach for the Efficient Self-Assembling of Multi-Component Photoactive Systems. Eur J Inorg Chem 2013. [DOI: 10.1002/ejic.201300998] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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37
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Maiuri M, Snellenburg JJ, van Stokkum IHM, Pillai S, WongCarter K, Gust D, Moore TA, Moore AL, van Grondelle R, Cerullo G, Polli D. Ultrafast Energy Transfer and Excited State Coupling in an Artificial Photosynthetic Antenna. J Phys Chem B 2013; 117:14183-90. [DOI: 10.1021/jp401073w] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- M. Maiuri
- IFN-CNR, Dipartimento di Fisica, Politecnico di Milano, Piazza L. da Vinci, 32, 20133 Milano, Italy
| | - J. J. Snellenburg
- Department of Physics
and Astronomy, VU University Amsterdam, De Boelelaan 1081, 1081HV Amsterdam, The Netherlands
| | - I. H. M. van Stokkum
- Department of Physics
and Astronomy, VU University Amsterdam, De Boelelaan 1081, 1081HV Amsterdam, The Netherlands
| | - S. Pillai
- Department of Chemistry & Biochemistry and The Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, Arizona 85287-1605, United States
| | - K. WongCarter
- Department of Chemistry & Biochemistry and The Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, Arizona 85287-1605, United States
| | - D. Gust
- Department of Chemistry & Biochemistry and The Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, Arizona 85287-1605, United States
| | - T. A. Moore
- Department of Chemistry & Biochemistry and The Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, Arizona 85287-1605, United States
| | - A. L. Moore
- Department of Chemistry & Biochemistry and The Center for Bioenergy and Photosynthesis, Arizona State University, Tempe, Arizona 85287-1605, United States
| | - R. van Grondelle
- Department of Physics
and Astronomy, VU University Amsterdam, De Boelelaan 1081, 1081HV Amsterdam, The Netherlands
| | - G. Cerullo
- IFN-CNR, Dipartimento di Fisica, Politecnico di Milano, Piazza L. da Vinci, 32, 20133 Milano, Italy
| | - D. Polli
- IFN-CNR, Dipartimento di Fisica, Politecnico di Milano, Piazza L. da Vinci, 32, 20133 Milano, Italy
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38
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Knecht S, Marian CM, Kongsted J, Mennucci B. On the photophysics of carotenoids: a multireference DFT study of peridinin. J Phys Chem B 2013; 117:13808-15. [PMID: 24090414 DOI: 10.1021/jp4078739] [Citation(s) in RCA: 46] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We present a quantum-mechanical investigation of the photophysics of a specific carotenoid, peridinin, which is present in light-harvesting complexes. The fundamental role played by the geometry in determining the position and character of its low-lying singlet electronic states is investigated using a multireference DFT approach in combination with a continuum solvation model. The main photophysical properties of peridinin appear to be governed by the lowest two singlet excited states, as no evidence points to an intermediate S* state and the energies of the upper excited states are too high to allow their population with excitation in the visible range. These two excited states (S1, 2(1)A(g)(-) and S2, 1(1)B(u)(+)) are highly connected through the conjugation path here characterized by the value of the bond length alternation (BLA). The S1 and S2 states present distinct natures for small BLA values, whereas for larger ones they become more similar in terms of both brightness and dipolar character and their energies become closer. The geometrical issue is thus of fundamental importance for a correct interpretation of the spectroscopic signatures of peridinin.
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Affiliation(s)
- Stefan Knecht
- Laboratory of Physical Chemistry, ETH Zürich , Wolfgang-Pauli-Straße 10, 8093 Zürich, Switzerland
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39
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Wahadoszamen M, Ghazaryan A, Cingil HE, Ara AM, Büchel C, van Grondelle R, Berera R. Stark fluorescence spectroscopy reveals two emitting sites in the dissipative state of FCP antennas. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2013; 1837:193-200. [PMID: 24036191 DOI: 10.1016/j.bbabio.2013.09.001] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2013] [Revised: 08/31/2013] [Accepted: 09/04/2013] [Indexed: 10/26/2022]
Abstract
Diatoms are characterized by very efficient photoprotective mechanisms where the excess energy is dissipated as heat in the main antenna system constituted by fucoxanthin-chlorophyll (Chl) protein complexes (FCPs). We performed Stark fluorescence spectroscopy on FCPs in their light-harvesting and energy dissipating states. Our results show that two distinct emitting bands are created upon induction of energy dissipation in FCPa and possibly in FCPb. More specifically one band is characterized by broad red shifted emission above 700nm and bears strong similarity with a red shifted band that we detected in the dissipative state of the major light-harvesting complex II (LHCII) of plants [26]. We discuss the results in the light of different mechanisms proposed to be responsible for photosynthetic photoprotection.
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Affiliation(s)
- Md Wahadoszamen
- Division of Physics and Astronomy, Department of Biophysics, VU University Amsterdam, The Netherlands; Department of Physics, University of Dhaka, Dhaka 1000, Bangladesh.
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40
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Fluorescence quenching of the phycobilisome terminal emitter LCM from the cyanobacterium Synechocystis sp. PCC 6803 detected in vivo and in vitro. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2013; 125:137-45. [DOI: 10.1016/j.jphotobiol.2013.05.014] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2013] [Revised: 05/30/2013] [Accepted: 05/30/2013] [Indexed: 11/21/2022]
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41
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Balevičius V, Gelzinis A, Abramavicius D, Valkunas L. Excitation Energy Transfer and Quenching in a Heterodimer: Applications to the Carotenoid–Phthalocyanine Dyads. J Phys Chem B 2013; 117:11031-41. [DOI: 10.1021/jp3118083] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- V. Balevičius
- Department of Theoretical Physics,
Faculty of Physics, Vilnius University,
Sauletekio Avenue 9, build. 3, LT-10222 Vilnius, Lithuania
- Center for Physical Sciences
and Technology, Institute of Physics, Savanoriu Avenue 231, LT-02300
Vilnius, Lithuania
| | - A. Gelzinis
- Department of Theoretical Physics,
Faculty of Physics, Vilnius University,
Sauletekio Avenue 9, build. 3, LT-10222 Vilnius, Lithuania
| | - D. Abramavicius
- Department of Theoretical Physics,
Faculty of Physics, Vilnius University,
Sauletekio Avenue 9, build. 3, LT-10222 Vilnius, Lithuania
- State
Key Laboratory of Supramolecular
Structure and Materials, Jilin University, 2699 Qianjin Street, Changchun 130012, PR China
| | - L. Valkunas
- Department of Theoretical Physics,
Faculty of Physics, Vilnius University,
Sauletekio Avenue 9, build. 3, LT-10222 Vilnius, Lithuania
- Center for Physical Sciences
and Technology, Institute of Physics, Savanoriu Avenue 231, LT-02300
Vilnius, Lithuania
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42
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Pandit A, Reus M, Morosinotto T, Bassi R, Holzwarth AR, de Groot HJM. An NMR comparison of the light-harvesting complex II (LHCII) in active and photoprotective states reveals subtle changes in the chlorophyll a ground-state electronic structures. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2013; 1827:738-44. [PMID: 23466337 DOI: 10.1016/j.bbabio.2013.02.015] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/18/2012] [Revised: 02/14/2013] [Accepted: 02/23/2013] [Indexed: 11/15/2022]
Abstract
To protect the photosynthetic apparatus against photo-damage in high sunlight, the photosynthetic antenna of oxygenic organisms can switch from a light-harvesting to a photoprotective mode through the process of non-photochemical quenching (NPQ). There is growing evidence that light-harvesting proteins of photosystem II participate in photoprotection by a built-in capacity to switch their conformation between light-harvesting and energy-dissipating states. Here we applied high-resolution Magic-Angle Spinning Nuclear Magnetic Resonance on uniformly (13)C-enriched major light-harvesting complex II (LHCII) of Chlamydomonas reinhardtii in active or quenched states. Our results reveal that the switch into a dissipative state is accompanied by subtle changes in the chlorophyll (Chl) a ground-state electronic structures that affect their NMR responses, particularly for the macrocycle (13)C4, (13)C5 and (13)C6 carbon atoms. Inspection of the LHCII X-ray structures shows that of the Chl molecules in the terminal emitter domain, where excited-state energy accumulates prior to further transfer or dissipation, the C4, 5 and 6 atoms are in closest proximity to lutein; supporting quenching mechanisms that involve altered Chl-lutein interactions in the dissipative state. In addition the observed changes could represent altered interactions between Chla and neoxanthin, which alters its configuration under NPQ conditions. The Chls appear to have increased dynamics in unquenched, detergent-solubilized LHCII. Our work demonstrates that solid-state Nuclear Magnetic Resonance is applicable to investigate high-resolution structural details of light-harvesting proteins in varied functional conditions, and represents a valuable tool to address their molecular plasticity associated with photoprotection.
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Affiliation(s)
- Anjali Pandit
- Department of Physics and Astronomy, VU University Amsterdam, Amsterdam, The Netherlands.
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43
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Trimellitic anhydride- and pyromellitic dianhydride-originated tetrakis/octakis(octyloxycarbonyl)phthalocyaninato metal complexes. INORG CHEM COMMUN 2013. [DOI: 10.1016/j.inoche.2012.11.021] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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44
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Copley G, Moore TA, Moore AL, Gust D. Analog applications of photochemical switches. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2013; 25:456-461. [PMID: 23427337 DOI: 10.1002/adma.201201744] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
Molecules that change their structure in response to a stimulus such as light or an added chemical can act as molecular switches. Such switches can be chemically linked to other active moieties to create molecular "devices" for various purposes. There has been much activity of late in the use of molecular switches such as photochromes in the construction of molecular logic gates that carry out binary or digital functions. However, ensembles of such molecules can also act as analog devices. Here, examples of a molecular photonic signal transducer and two mimics of photosynthetic photoregulatory processes are discussed.
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Affiliation(s)
- Graeme Copley
- Department of Chemistry and Biochemistry, Arizona State University, Tempe, AZ 85287, USA
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45
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Pillai S, Ravensbergen J, Antoniuk-Pablant A, Sherman BD, van Grondelle R, Frese RN, Moore TA, Gust D, Moore AL, Kennis JTM. Carotenoids as electron or excited-state energy donors in artificial photosynthesis: an ultrafast investigation of a carotenoporphyrin and a carotenofullerene dyad. Phys Chem Chem Phys 2013; 15:4775-84. [DOI: 10.1039/c3cp50364j] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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46
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Maiuri M, Snellenburg J, van Stokkum I, Pillai S, Gust D, Moore T, Moore A, van Grondelle R, Cerullo G, Polli D. Ultrafast Energy Transfer in an Artificial Photosynthetic Antenna. EPJ WEB OF CONFERENCES 2013. [DOI: 10.1051/epjconf/20134108010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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47
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Kosumi D, Maruta S, Horibe T, Nagaoka Y, Fujii R, Sugisaki M, Cogdell RJ, Hashimoto H. Ultrafast excited state dynamics of spirilloxanthin in solution and bound to core antenna complexes: Identification of the S* and T1 states. J Chem Phys 2012; 137:064505. [DOI: 10.1063/1.4737129] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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48
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Balevičius V, Gelzinis A, Abramavicius D, Mančal T, Valkunas L. Excitation dynamics and relaxation in a molecular heterodimer. Chem Phys 2012. [DOI: 10.1016/j.chemphys.2012.02.021] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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49
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Kloz M, Grondelle RV, Kennis JT. Correction for the time dependent inner filter effect caused by transient absorption in femtosecond stimulated Raman experiment. Chem Phys Lett 2012. [DOI: 10.1016/j.cplett.2012.07.005] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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50
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Sabin JR, Varzatskii OA, Voloshin YZ, Starikova ZA, Novikov VV, Nemykin VN. Insight into the electronic structure, optical properties, and redox behavior of the hybrid phthalocyaninoclathrochelates from experimental and density functional theory approaches. Inorg Chem 2012; 51:8362-72. [PMID: 22800298 DOI: 10.1021/ic3008798] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
An insight into the electronic structure of several hafnium(IV), zirconium(IV), and lutetium(III) phthalocyaninoclathrochelates has been discussed on the basis of experimental UV-vis, MCD, electro- and spectroelectrochemical data as well as density functional theory (DFT) and time-dependent DFT (TDDFT) calculations. On the basis of UV-vis and MCD spectroscopy as well as theoretical predictions, it was concluded that the electronic structure of the phthalocyninoclathrochelates can be described in the first approximation as a superposition of the weakly interacting phthalocyanine and clathrochelate substituents. Spectroelectrochemical data and DFT calculations clearly confirm that the highest occupied molecular orbital (HOMO) in all tested complexes is localized on the phthalocyanine ligand. X-ray crystallography on zirconium(IV) and earlier reported hafnium(IV) phthalocyaninoclathrochelate complexes revealed a slightly distorted phthalocyanine conformation with seven-coordinated metal center positioned ∼1 Å above macrocyclic cavity. The geometry of the encapsulated iron(II) ion in the clathrochelate fragment was found to be between trigonal-prismatic and trigonal-antiprismatic.
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Affiliation(s)
- Jared R Sabin
- Department of Chemistry & Biochemistry, 1039 University Drive, University of Minnesota Duluth, Duluth, Minnesota 55812, United States
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