1
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Satpathy JK, Yadav R, Bagha UK, Kumar D, Sastri CV, de Visser SP. Enhanced Reactivity through Equatorial Sulfur Coordination in Nonheme Iron(IV)-Oxo Complexes: Insights from Experiment and Theory. Inorg Chem 2024; 63:6752-6766. [PMID: 38551622 DOI: 10.1021/acs.inorgchem.4c00070] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/16/2024]
Abstract
Sulfur ligation in metalloenzymes often gives the active site unique properties, whether it is the axial cysteinate ligand in the cytochrome P450s or the equatorial sulfur/thiol ligation in nonheme iron enzymes. To understand sulfur ligation to iron complexes and how it affects the structural, spectroscopic, and intrinsic properties of the active species and the catalysis of substrates, we pursued a systematic study and compared sulfur with amine-ligated iron(IV)-oxo complexes. We synthesized and characterized a biomimetic N4S-ligated iron(IV)-oxo complex and compared the obtained results with an analogous N5-ligated iron(IV)-oxo complex. Our work shows that the amine for sulfur replacement in the equatorial ligand framework leads to a rate enhancement for oxygen atom and hydrogen atom transfer reactions. Moreover, the sulfur-ligated iron(IV)-oxo complex reacts through a different reaction mechanism as compared to the N5-ligated iron(IV)-oxo complex, where the former reacts through hydride transfer with the latter reacting via radical pathways. We show that the reactivity differences are caused by a dramatic change in redox potential between the two complexes. Our studies highlight the importance of implementing a sulfur ligand into the equatorial ligand framework of nonheme iron(IV)-oxo complexes and how it affects the physicochemical properties of the oxidant and its reactivity.
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Affiliation(s)
- Jagnyesh K Satpathy
- Department of Chemistry, Indian Institute of Technology, Guwahati 781039, Assam, India
| | - Rolly Yadav
- Department of Chemistry, Indian Institute of Technology, Guwahati 781039, Assam, India
| | - Umesh K Bagha
- Department of Chemistry, Indian Institute of Technology, Guwahati 781039, Assam, India
| | - Devesh Kumar
- Department of Applied Physics, Babasaheb Bhimrao Ambedkar University, School for Physical Sciences, Vidya Vihar, Rae Bareilly Road, Lucknow 226025, UP, India
| | - Chivukula V Sastri
- Department of Chemistry, Indian Institute of Technology, Guwahati 781039, Assam, India
| | - Sam P de Visser
- Department of Chemistry, Indian Institute of Technology, Guwahati 781039, Assam, India
- The Manchester Institute of Biotechnology and Department of Chemical Engineering, The University of Manchester, 131 Princess Street, Manchester M1 7DN, United Kingdom
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2
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Zhu W, Sharma N, Lee YM, El-Khouly ME, Fukuzumi S, Nam W. Use of Singlet Oxygen in the Generation of a Mononuclear Nonheme Iron(IV)-Oxo Complex. Inorg Chem 2023; 62:4116-4123. [PMID: 36862977 DOI: 10.1021/acs.inorgchem.2c04020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/04/2023]
Abstract
Nonheme iron(III)-superoxo intermediates are generated in the activation of dioxygen (O2) by nonheme iron(II) complexes and then converted to iron(IV)-oxo species by reacting with hydrogen donor substrates with relatively weak C-H bonds. If singlet oxygen (1O2) with ca. 1 eV higher energy than the ground state triplet oxygen (3O2) is employed, iron(IV)-oxo complexes can be synthesized using hydrogen donor substrates with much stronger C-H bonds. However, 1O2 has never been used in generating iron(IV)-oxo complexes. Herein, we report that a nonheme iron(IV)-oxo species, [FeIV(O)(TMC)]2+ (TMC = tetramethylcyclam), is generated using 1O2, which is produced with boron subphthalocyanine chloride (SubPc) as a photosensitizer, and hydrogen donor substrates with relatively strong C-H bonds, such as toluene (BDE = 89.5 kcal mol-1), via electron transfer from [FeII(TMC)]2+ to 1O2, which is energetically more favorable by 0.98 eV, as compared with electron transfer from [FeII(TMC)]2+ to 3O2. Electron transfer from [FeII(TMC)]2+ to 1O2 produces an iron(III)-superoxo complex, [FeIII(O2)(TMC)]2+, followed by abstracting a hydrogen atom from toluene by [FeIII(O2)(TMC)]2+ to form an iron(III)-hydroperoxo complex, [FeIII(OOH)(TMC)]2+, that is further converted to the [FeIV(O)(TMC)]2+ species. Thus, the present study reports the first example of generating a mononuclear nonheme iron(IV)-oxo complex with the use of singlet oxygen, instead of triplet oxygen, and a hydrogen atom donor with relatively strong C-H bonds. Detailed mechanistic aspects, such as the detection of 1O2 emission, the quenching by [FeII(TMC)]2+, and the quantum yields, have also been discussed to provide valuable mechanistic insights into understanding nonheme iron-oxo chemistry.
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Affiliation(s)
- Wenjuan Zhu
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Namita Sharma
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Yong-Min Lee
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Mohamed E El-Khouly
- Institute of Basic and Applied Sciences, Egypt-Japan University of Science and Technology, New Borg El-Arab 21934, Alexandria, Egypt
| | - Shunichi Fukuzumi
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Wonwoo Nam
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
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3
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Zadeh-Haghighi H, Simon C. Magnetic field effects in biology from the perspective of the radical pair mechanism. J R Soc Interface 2022; 19:20220325. [PMID: 35919980 PMCID: PMC9346374 DOI: 10.1098/rsif.2022.0325] [Citation(s) in RCA: 34] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2022] [Accepted: 07/14/2022] [Indexed: 04/07/2023] Open
Abstract
Hundreds of studies have found that weak magnetic fields can significantly influence various biological systems. However, the underlying mechanisms behind these phenomena remain elusive. Remarkably, the magnetic energies implicated in these effects are much smaller than thermal energies. Here, we review these observations, and we suggest an explanation based on the radical pair mechanism, which involves the quantum dynamics of the electron and nuclear spins of transient radical molecules. While the radical pair mechanism has been studied in detail in the context of avian magnetoreception, the studies reviewed here show that magnetosensitivity is widespread throughout biology. We review magnetic field effects on various physiological functions, discussing static, hypomagnetic and oscillating magnetic fields, as well as isotope effects. We then review the radical pair mechanism as a potential unifying model for the described magnetic field effects, and we discuss plausible candidate molecules for the radical pairs. We review recent studies proposing that the radical pair mechanism provides explanations for isotope effects in xenon anaesthesia and lithium treatment of hyperactivity, magnetic field effects on the circadian clock, and hypomagnetic field effects on neurogenesis and microtubule assembly. We conclude by discussing future lines of investigation in this exciting new area of quantum biology.
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Affiliation(s)
- Hadi Zadeh-Haghighi
- Department of Physics and Astronomy, University of Calgary, Calgary, Alberta, Canada T2N 1N4
- Institute for Quantum Science and Technology, University of Calgary, Calgary, Alberta, Canada T2N 1N4
- Hotchkiss Brain Institute, University of Calgary, Calgary, Alberta, Canada T2N 1N4
| | - Christoph Simon
- Department of Physics and Astronomy, University of Calgary, Calgary, Alberta, Canada T2N 1N4
- Institute for Quantum Science and Technology, University of Calgary, Calgary, Alberta, Canada T2N 1N4
- Hotchkiss Brain Institute, University of Calgary, Calgary, Alberta, Canada T2N 1N4
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4
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Johannissen LO, Taylor A, Hardman SJ, Heyes DJ, Scrutton NS, Hay S. How Photoactivation Triggers Protochlorophyllide Reduction: Computational Evidence of a Stepwise Hydride Transfer during Chlorophyll Biosynthesis. ACS Catal 2022; 12:4141-4148. [PMID: 35574213 PMCID: PMC9098174 DOI: 10.1021/acscatal.2c00866] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2022] [Revised: 03/08/2022] [Indexed: 12/28/2022]
Abstract
The photochemical reaction catalyzed by enzyme protochlorophyllide oxidoreductase (POR), a rare example of a photoactivated enzyme, is a crucial step during chlorophyll biosynthesis and involves the fastest known biological hydride transfer. Structures of the enzyme with bound substrate protochlorophyllide (PChlide) and coenzyme nicotinamide adenine dinucleotide phosphate (NADPH) have recently been published, opening up the possibility of using computational approaches to provide a comprehensive understanding of the excited state chemistry. Herein, we propose a complete mechanism for the photochemistry between PChlide and NADPH based on density functional theory (DFT) and time-dependent DFT calculations that is consistent with recent experimental data. In this multi-step mechanism, photoexcitation of PChlide leads to electron transfer from NADPH to PChlide, which in turn facilitates hydrogen atom transfer by weakening the breaking C-H bond. This work rationalizes how photoexcitation facilitates hydride transfer in POR and has more general implications for biological hydride transfer reactions.
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Affiliation(s)
- Linus O. Johannissen
- Manchester Institute of Biotechnology
and Department of Chemistry, The University
of Manchester, Manchester M1 7DN, U.K.
| | - Aoife Taylor
- Manchester Institute of Biotechnology
and Department of Chemistry, The University
of Manchester, Manchester M1 7DN, U.K.
| | - Samantha J.O. Hardman
- Manchester Institute of Biotechnology
and Department of Chemistry, The University
of Manchester, Manchester M1 7DN, U.K.
| | - Derren J. Heyes
- Manchester Institute of Biotechnology
and Department of Chemistry, The University
of Manchester, Manchester M1 7DN, U.K.
| | - Nigel S. Scrutton
- Manchester Institute of Biotechnology
and Department of Chemistry, The University
of Manchester, Manchester M1 7DN, U.K.
| | - Sam Hay
- Manchester Institute of Biotechnology
and Department of Chemistry, The University
of Manchester, Manchester M1 7DN, U.K.
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5
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Steuer L, Kaifer E, Himmel HJ. Redox‐Active Dendrimer‐Like Oligoguanidines and Their Use in a Proton‐Coupled Electron Transfer Reaction. European J Org Chem 2022. [DOI: 10.1002/ejoc.202101360] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Lena Steuer
- Ruprecht Karls Universitat Heidelberg Fakultat fur Chemie und Geowissenschaften Chemistry GERMANY
| | - Elisabeth Kaifer
- Ruprecht Karls Universitat Heidelberg Fakultat fur Chemie und Geowissenschaften Chemistry GERMANY
| | - Hans-Jörg Himmel
- Ruprecht-Karls-Universität Heidelberg Institut für Anorganische Chemie Im Neuenheimer Feld 270 69120 Heidelberg GERMANY
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6
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Shen GB, Qian BC, Fu YH, Zhu XQ. Thermodynamics of the elementary steps of organic hydride chemistry determined in acetonitrile and their applications. Org Chem Front 2022. [DOI: 10.1039/d2qo01310j] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
This review focuses on the thermodynamics of the elementary step of 421 organic hydrides and unsaturated compounds releasing or accepting hydride or hydrogen determined in acetonitrile as well as their potential applications.
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Affiliation(s)
- Guang-Bin Shen
- School of Medical Engineering, Jining Medical University, Jining, Shandong, 272000, P. R. China
| | - Bao-Chen Qian
- School of Medical Engineering, Jining Medical University, Jining, Shandong, 272000, P. R. China
| | - Yan-Hua Fu
- College of Chemistry and Environmental Engineering, Anyang Institute of Technology, Anyang, Henan, 455000, China
| | - Xiao-Qing Zhu
- The State Key Laboratory of Elemento-Organic Chemistry, Department of Chemistry, Nankai University, Collaborative Innovation Center of Chemical Science and Engineering (Tianjin), Tianjin 300071, China
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7
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PCET to bound-superoxide by NADH and NADHX in aqueous-acid media: a kinetic inspection. J CHEM SCI 2021. [DOI: 10.1007/s12039-021-01994-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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8
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Fukuzumi S, Lee Y, Nam W. Deuterium kinetic isotope effects as redox mechanistic criterions. B KOREAN CHEM SOC 2021. [DOI: 10.1002/bkcs.12417] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Shunichi Fukuzumi
- Department of Chemistry and Nano Science Ewha Womans University Seoul Korea
- Faculty of Science and Engineering Meijo University Nagoya Aichi Japan
| | - Yong‐Min Lee
- Department of Chemistry and Nano Science Ewha Womans University Seoul Korea
- Research Institute for Basic Sciences Ewha Womans University Seoul Korea
| | - Wonwoo Nam
- Department of Chemistry and Nano Science Ewha Womans University Seoul Korea
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9
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Valdez-Moreira JA, Beagan DM, Yang H, Telser J, Hoffman BM, Pink M, Carta V, Smith JM. Hydrocarbon Oxidation by an Exposed, Multiply Bonded Iron(III) Oxo Complex. ACS CENTRAL SCIENCE 2021; 7:1751-1755. [PMID: 34729418 PMCID: PMC8554833 DOI: 10.1021/acscentsci.1c00890] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2021] [Indexed: 06/10/2023]
Abstract
The iron oxo unit, [Fe=O] n+ is a critical intermediate in biological oxidation reactions. While its higher oxidation states are well studied, relatively little is known about the least-oxidized form [FeIII=O]+. Here, the thermally stable complex PhB(AdIm)3Fe=O has been structurally, spectroscopically, and computationally characterized as a bona fide iron(III) oxo. An unusually short Fe-O bond length is consistent with iron-oxygen multiple bond character and is supported by electronic structure calculations. The complex is thermally stable yet is able to perform hydrocarbon oxidations, facilitating both C-O bond formation and dehydrogenation reactions.
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Affiliation(s)
- Juan A. Valdez-Moreira
- Department
of Chemistry, Indiana University, 800 E. Kirkwood Avenue, Bloomington Indiana 47405, United States
| | - Daniel M. Beagan
- Department
of Chemistry, Indiana University, 800 E. Kirkwood Avenue, Bloomington Indiana 47405, United States
| | - Hao Yang
- Department
of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - Joshua Telser
- Department
of Biological, Physical and Health Sciences, Roosevelt University, Chicago, Illinois 60605, United States
| | - Brian M. Hoffman
- Department
of Chemistry, Northwestern University, Evanston, Illinois 60208, United States
| | - Maren Pink
- Department
of Chemistry, Indiana University, 800 E. Kirkwood Avenue, Bloomington Indiana 47405, United States
| | - Veronica Carta
- Department
of Chemistry, Indiana University, 800 E. Kirkwood Avenue, Bloomington Indiana 47405, United States
| | - Jeremy M. Smith
- Department
of Chemistry, Indiana University, 800 E. Kirkwood Avenue, Bloomington Indiana 47405, United States
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10
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Walter P, Hübner O, Kaifer E, Himmel HJ. Proton-Coupled Electron Transfer (PCET) with 1,4-Bisguanidino-Benzene Derivatives: Comparative Study and Use in Acid-Initiated C-H Activation. Chemistry 2021; 27:11943-11956. [PMID: 34132428 PMCID: PMC8457230 DOI: 10.1002/chem.202101539] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2021] [Indexed: 11/18/2022]
Abstract
Proton‐coupled electron transfer (PCET) is of key importance in modern synthetic chemistry. Redox‐active guanidines were established by our group as valuable alternatives to toxic high‐potential benzoquinones in a variety of different PCET reactions. In this work, the PCET reactivity of a series of 1,4‐bisguanidino‐benzenes varying in their redox potentials and proton affinities is evaluated. The relevant redox and protonation states are fully characterized, and the compounds sorted with respect to their PCET reactivity by comparative PCET experiments supplemented by quantum‐chemical calculations. Depending on the studied reactions, the driving force is either electron transfer or proton transfer; thereby the influence of both processes on the overall reactivity could be assessed. Then, two of the PCET reagents are applied in representative oxidative aryl‐aryl coupling reactions, namely the intramolecular coupling of 3,3’’‐4,4’’‐tetramethoxy‐o‐terphenyl to give the corresponding triphenylene, the intermolecular coupling of N‐ethylcarbazole to give N,N’‐diethyl‐3,3’‐bicarbazole, and in the oxidative lactonization of 2‐[(4‐methoxyphenyl)methyl]‐benzoic acid. Under mild conditions, the reactions proceed fast and efficient. Only small amounts of acid are needed, in clear contrast to the corresponding coupling reactions with traditional high‐potential benzoquinones such as DDQ or chloranil requiring a large excess of a strong acid.
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Affiliation(s)
- Petra Walter
- Inorganic Chemistry, Ruprecht-Karls University of Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
| | - Olaf Hübner
- Inorganic Chemistry, Ruprecht-Karls University of Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
| | - Elisabeth Kaifer
- Inorganic Chemistry, Ruprecht-Karls University of Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
| | - Hans-Jörg Himmel
- Inorganic Chemistry, Ruprecht-Karls University of Heidelberg, Im Neuenheimer Feld 270, 69120, Heidelberg, Germany
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11
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Lee YS, Gerulskis R, Minteer SD. Advances in electrochemical cofactor regeneration: enzymatic and non-enzymatic approaches. Curr Opin Biotechnol 2021; 73:14-21. [PMID: 34246871 DOI: 10.1016/j.copbio.2021.06.013] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2021] [Revised: 06/12/2021] [Accepted: 06/13/2021] [Indexed: 11/28/2022]
Abstract
Nicotinamide adenine dinucleotide(NAD(P)H) is a metabolically interconnected redox cofactor serving as a hydride source for the majority of oxidoreductases, and consequently constituting a significant cost factor for bioprocessing. Much research has been devoted to the development of efficient, affordable, and sustainable methods for the regeneration of these cofactors through chemical, electrochemical, and photochemical approaches. However, the enzymatic approach using formate dehydrogenase is still the most abundantly employed in industrial applications, even though it suffers from system complexity and product purity issues. In this review, we summarize non-enzymatic and enzymatic electrochemical approaches for cofactor regeneration, then discuss recent developments to solve major issues. Issues discussed include Rh-catalyst mediated enzyme mutual inactivation, electron-transfer rates, catalyst sustainability, product selectivity and simplifying product purification. Recently reported remedies are discussed, such as heterogeneous metal catalysts generating H+ as the sole byproduct or high activity and stability redox-polymer immobilized enzymatic systems for sustainable organic synthesis.
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Affiliation(s)
- Yoo Seok Lee
- Department of Chemistry, University of Utah, 315 S 1400 E, Salt Lake City, UT 84112, USA.
| | - Rokas Gerulskis
- Department of Chemistry, University of Utah, 315 S 1400 E, Salt Lake City, UT 84112, USA
| | - Shelley D Minteer
- Department of Chemistry, University of Utah, 315 S 1400 E, Salt Lake City, UT 84112, USA.
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12
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Jeong D, Cho J. Hydride-Transfer Reaction to a Mononuclear Manganese(III) Iodosylarene Complex. Inorg Chem 2021; 60:7612-7616. [PMID: 33978417 DOI: 10.1021/acs.inorgchem.1c00562] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Metal iodosylarene species have received interest because of their potential oxidative power as a catalyst. We present the first example of hydride-transfer reactions to a mononuclear manganese(III) iodosylbenzene complex, [MnIII(TBDAP)(OIPh)(OH)]2+ (1; TBDAP = N,N-di-tert-butyl-2,11-diaza[3.3](2,6)pyridinophane), with dihydronicotinamide adenine dinucleotide (NADH) analogues. Kinetic studies show that hydride-transfer from the NADH analogues to 1 occurs via a proton-coupled electron transfer, followed by a rapid electron transfer.
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Affiliation(s)
- Donghyun Jeong
- Department of Chemistry, Ulsan National Institute of Science and Technology, Ulsan 44919, Korea.,Department of Emerging Materials Science, Daegu Gyeongbuk Institute of Science and Technology, Daegu 42988, Korea
| | - Jaeheung Cho
- Department of Chemistry, Ulsan National Institute of Science and Technology, Ulsan 44919, Korea.,Department of Emerging Materials Science, Daegu Gyeongbuk Institute of Science and Technology, Daegu 42988, Korea
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13
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Devi T, Lee YM, Fukuzumi S, Nam W. Acid-promoted hydride transfer from an NADH analogue to a Cr(iii)-superoxo complex via a proton-coupled hydrogen atom transfer. Dalton Trans 2021; 50:675-680. [PMID: 33331375 DOI: 10.1039/d0dt04004e] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The sequential transfer of an electron, a proton and an electron in a hydride transfer from dihydronicotinamide adenine dinucleotide (NADH) and its analogues has never been separated well. In addition, the effect of acids on hydride transfer from an NADH analogue to a metal-superoxo species has yet to be reported. We report herein the first example of an acid-promoted hydride transfer from an NADH analogue, 10-methyl-9,10-dihydroacridine (AcrH2), to a Cr(iii)-superoxo complex, [(TMC)CrIII(O2)]2+, in the presence of HOTf in MeCN at 233 K. The acid-promoted hydride transfer from AcrH2 to [(TMC)CrIII(O2)]2+ occurs via a proton-coupled hydrogen atom transfer from AcrH2 to [(TMC)CrIII(O2)]2+ to produce a radical cation (AcrH2˙+) with an inverse deuterium isotope effect (KIE) of 0.93(5). AcrH2˙+ decayed via a proton transfer from AcrH2˙+ to AcrH2 with a KIE of 2.0(1), followed by the reaction of 10-methylacridinyl radical (AcrH˙) with [(TMC)CrIII(H2O2)]3+ to produce a 10-methylacridinium ion (AcrH+) and [(TMC)CrIII]3+. This work provides valuable insights into the mechanism of hydride transfer of NADH analogues by metal-superoxo intermediates, such as the switchover of the reaction mechanism from a one-step to a separated multi-step pathway in the presence of an acid.
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Affiliation(s)
- Tarali Devi
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea.
| | - Yong-Min Lee
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea.
| | - Shunichi Fukuzumi
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea. and Faculty of Science and Engineering, Meijo University, Nagoya, Aichi 468-8502, Japan
| | - Wonwoo Nam
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea. and Institute of Drug Discovery Technology, Ningbo University, Ningbo 315211, China
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14
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Tan H, Wang S, Wang J, Song F, Sun X, Zhao R, Zhang Y, Cui H. High-efficiency catalytic wet air oxidation of high salinity phenolic wastewater under atmospheric pressure in molten salt hydrate media. NEW J CHEM 2021. [DOI: 10.1039/d0nj05271j] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Highly efficient continuous operation of an improved CWAO process coupled with desalination in MSHs via the temperature-increasing effect and common-ion salting-out effect.
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Affiliation(s)
- Hongzi Tan
- School of Chemistry & Chemical Engineering
- Shandong University of Technology
- Zibo
- P. R. China
| | - Shuai Wang
- School of Chemistry & Chemical Engineering
- Shandong University of Technology
- Zibo
- P. R. China
| | - Jinghua Wang
- School of Chemistry & Chemical Engineering
- Shandong University of Technology
- Zibo
- P. R. China
| | - Feng Song
- School of Chemistry & Chemical Engineering
- Shandong University of Technology
- Zibo
- P. R. China
| | - Xiuyu Sun
- School of Chemistry & Chemical Engineering
- Shandong University of Technology
- Zibo
- P. R. China
| | - Rongrong Zhao
- School of Chemistry & Chemical Engineering
- Shandong University of Technology
- Zibo
- P. R. China
| | - Yuan Zhang
- School of Chemistry & Chemical Engineering
- Shandong University of Technology
- Zibo
- P. R. China
| | - Hongyou Cui
- School of Chemistry & Chemical Engineering
- Shandong University of Technology
- Zibo
- P. R. China
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15
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Wild U, Walter P, Hübner O, Kaifer E, Himmel H. Evaluation of the Synthetic Scope and the Reaction Pathways of Proton-Coupled Electron Transfer with Redox-Active Guanidines in C-H Activation Processes. Chemistry 2020; 26:16504-16513. [PMID: 32893902 PMCID: PMC7756729 DOI: 10.1002/chem.202003424] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2020] [Revised: 09/04/2020] [Indexed: 11/28/2022]
Abstract
Proton-coupled electron transfer (PCET) is currently intensively studied because of its importance in synthetic chemistry and biology. In recent years it was shown that redox-active guanidines are capable PCET reagents for the selective oxidation of organic molecules. In this work, the scope of their PCET reactivity regarding reactions that involve C-H activation is explored and kinetic studies carried out to disclose the reaction mechanisms. Organic molecules with potential up to 1.2 V vs. ferrocenium/ferrocene are efficiently oxidized. Reactions are initiated by electron transfer, followed by slow proton transfer from an electron-transfer equilibrium.
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Affiliation(s)
- Ute Wild
- Institut für Anorganische ChemieRuprecht-Karls-Universität HeidelbergIm Neuenheimer Feld 27069120HeidelbergGermany
| | - Petra Walter
- Institut für Anorganische ChemieRuprecht-Karls-Universität HeidelbergIm Neuenheimer Feld 27069120HeidelbergGermany
| | - Olaf Hübner
- Institut für Anorganische ChemieRuprecht-Karls-Universität HeidelbergIm Neuenheimer Feld 27069120HeidelbergGermany
| | - Elisabeth Kaifer
- Institut für Anorganische ChemieRuprecht-Karls-Universität HeidelbergIm Neuenheimer Feld 27069120HeidelbergGermany
| | - Hans‐Jörg Himmel
- Institut für Anorganische ChemieRuprecht-Karls-Universität HeidelbergIm Neuenheimer Feld 27069120HeidelbergGermany
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16
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Sharma N, Lee YM, Li XX, Nam W, Fukuzumi S. Singly Unified Driving Force Dependence of Outer-Sphere Electron-Transfer Pathways of Nonheme Manganese(IV)−Oxo Complexes in the Absence and Presence of Lewis Acids. Inorg Chem 2019; 58:13761-13765. [DOI: 10.1021/acs.inorgchem.9b02403] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Affiliation(s)
- Namita Sharma
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Yong-Min Lee
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Xiao-Xi Li
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Wonwoo Nam
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
- School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi’an 710119, China
| | - Shunichi Fukuzumi
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
- Graduate School of Science and Engineering, Meijo University, Nagoya, Aichi 468-8502, Japan
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17
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Lee YM, Kim S, Ohkubo K, Kim KH, Nam W, Fukuzumi S. Unified Mechanism of Oxygen Atom Transfer and Hydrogen Atom Transfer Reactions with a Triflic Acid-Bound Nonheme Manganese(IV)-Oxo Complex via Outer-Sphere Electron Transfer. J Am Chem Soc 2019; 141:2614-2622. [PMID: 30646680 DOI: 10.1021/jacs.8b12935] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Outer-sphere electron transfer from styrene, thioanisole, and toluene derivatives to a triflic acid (HOTf)-bound nonheme Mn(IV)-oxo complex, [(N4Py)MnIV(O)]2+-(HOTf)2 (N4Py = N, N-bis(2-pyridylmethyl)- N-bis(2-pyridyl)methylamine), has been shown to be the rate-determining step of different types of redox reactions such as epoxidation, sulfoxidation, and hydroxylation of styrene, thioanisole, and toluene derivatives, respectively, by [(N4Py)MnIV(O)]2+-(HOTf)2. The rate constants of HOTf-promoted epoxidation of all styrene derivatives with [(N4Py)MnIV(O)]2+ and electron transfer from electron donors to [(N4Py)MnV(O)]2+ exhibit a remarkably unified correlation with the driving force of outer-sphere electron transfer in light of the Marcus theory of electron transfer. The same electron-transfer driving force dependence is observed in the oxygen atom transfer from [(N4Py)MnIV(O)]2+-(HOTf)2 to thioanisole derivatives as well as in the hydrogen atom transfer from toluene derivatives to [(N4Py)MnIV(O)]2+-(HOTf)2. Thus, mechanisms of oxygen atom transfer (epoxidation and sulfoxidation) reactions of styrene and thioanisole derivatives and hydrogen atom transfer (hydroxylation) reactions of toluene derivatives by [(N4Py)MnIV(O)]2+-(HOTf)2 have been unified for the first time as the same reaction pathway via outer-sphere electron transfer, followed by the fast bond-forming step, which exhibits the singly unified electron-transfer driving force dependence of the rate constants as outer-sphere electron-transfer reactions. In the case of the epoxidation of cis-stilbene by [(N4Py)MnIV(O)]2+-(HOTf)2, the isomerization of cis-stilbene radical cation to trans-stilbene radical cation occurs after outer-sphere electron transfer from cis-stilbene to [(N4Py)MnIV(O)]2+-(HOTf)2 to yield trans-stilbene oxide selectively, which is also taken as evidence for the occurrence of electron transfer in the acid-catalyzed epoxidation.
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Affiliation(s)
- Yong-Min Lee
- Department of Chemistry and Nano Science , Ewha Womans University , Seoul 03760 , Korea
| | - Surin Kim
- Department of Chemistry and Nano Science , Ewha Womans University , Seoul 03760 , Korea
| | - Kei Ohkubo
- Institute for Advanced Co-Creation Studies, Open and Transdisciplinary Research Initiatives , Osaka University , Suita , Osaka 565-0871 , Japan
| | - Kyung-Ha Kim
- Department of Chemistry and Nano Science , Ewha Womans University , Seoul 03760 , Korea
| | - Wonwoo Nam
- Department of Chemistry and Nano Science , Ewha Womans University , Seoul 03760 , Korea.,State Key Laboratory for Oxo Synthesis and Selective Oxidation, Suzhou Research Institute of LICP, Lanzhou Institute of Chemical Physics (LICP), Chinese Academy of Sciences , Lanzhou 730000 , China
| | - Shunichi Fukuzumi
- Department of Chemistry and Nano Science , Ewha Womans University , Seoul 03760 , Korea.,Faculty of Science and Engineering , Meijo University , SENTAN, Japan Science and Technology Agency (JST), Nagoya , Aichi 468-0073 , Japan
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18
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Fukuzumi S, Lee YM, Nam W. Structure and reactivity of the first-row d-block metal-superoxo complexes. Dalton Trans 2019; 48:9469-9489. [DOI: 10.1039/c9dt01402k] [Citation(s) in RCA: 42] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
This review discusses the structure and reactivity of metal-superoxo complexes covering all ten first-row d-block metals from Sc to Zn.
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Affiliation(s)
- Shunichi Fukuzumi
- Department of Chemistry and Nano Science
- Ewha Womans University
- Seoul 03760
- Korea
- Graduate School of Science and Technology
| | - Yong-Min Lee
- Department of Chemistry and Nano Science
- Ewha Womans University
- Seoul 03760
- Korea
- Research Institute for Basic Sciences
| | - Wonwoo Nam
- Department of Chemistry and Nano Science
- Ewha Womans University
- Seoul 03760
- Korea
- State Key Laboratory for Oxo Synthesis and Selective Oxidation
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19
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Zhao H, Li Y, Zhu XQ. Thermodynamic Parameters of Elementary Steps for 3,5-Disubstituted 1,4-Dihydropyridines To Release Hydride Anions in Acetonitrile. ACS OMEGA 2018; 3:13598-13608. [PMID: 31458065 PMCID: PMC6645033 DOI: 10.1021/acsomega.8b01815] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/30/2018] [Accepted: 10/09/2018] [Indexed: 06/10/2023]
Abstract
A series of 3,5-disubstituted 1,4-dihydropyridine derivatives including the derivative with two chiral centers, 6H (R2 = CH3, CH2Ph), as a new type of organic hydride source were synthesized and characterized. The thermodynamic driving forces (defined as enthalpy changes or standard redox potentials) of the 6 elementary steps for the organic hydrides to release hydride ions in acetonitrile were measured by isothermal titration calorimetry and electrochemical methods. The impacts of the substituents and functional groups bearing the N1 and C3/C5 positions on the thermodynamic driving forces of the 6 elementary steps were examined and analyzed. Moreover, the results showed that the reaction mechanism between the chiral organic hydride and activated ketone (ethyl benzoylformate) was identified as the concerted hydride transfer pathway based on the thermodynamic analysis platform. These valuable and crucial thermodynamic parameters will provide a broadly beneficial impact on the applications of 3,5-disubstituted 1,4-dihydropyridine derivatives in organic synthesis and pharmaceutical chemistry.
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Affiliation(s)
- Hui Zhao
- The
State Key Laboratory of Elemento-Organic Chemistry and Collaborative
Innovation Center of Chemical Science and Engineering (Tianjin), College
of Chemistry, Nankai University, Tianjin 300071, P. R. China
| | - Yang Li
- The
State Key Laboratory of Elemento-Organic Chemistry and Collaborative
Innovation Center of Chemical Science and Engineering (Tianjin), College
of Chemistry, Nankai University, Tianjin 300071, P. R. China
| | - Xiao-Qing Zhu
- The
State Key Laboratory of Elemento-Organic Chemistry and Collaborative
Innovation Center of Chemical Science and Engineering (Tianjin), College
of Chemistry, Nankai University, Tianjin 300071, P. R. China
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20
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Andris E, Navrátil R, Jašík J, Puri M, Costas M, Que L, Roithová J. Trapping Iron(III)-Oxo Species at the Boundary of the "Oxo Wall": Insights into the Nature of the Fe(III)-O Bond. J Am Chem Soc 2018; 140:14391-14400. [PMID: 30336001 DOI: 10.1021/jacs.8b08950] [Citation(s) in RCA: 41] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Terminal non-heme iron(IV)-oxo compounds are among the most powerful and best studied oxidants of strong C-H bonds. In contrast to the increasing number of such complexes (>80 thus far), corresponding one-electron-reduced derivatives are much rarer and presumably less stable, and only two iron(III)-oxo complexes have been characterized to date, both of which are stabilized by hydrogen-bonding interactions. Herein we have employed gas-phase techniques to generate and identify a series of terminal iron(III)-oxo complexes, all without built-in hydrogen bonding. Some of these complexes exhibit ∼70 cm-1 decrease in ν(Fe-O) frequencies expected for a half-order decrease in bond order upon one-electron reduction to an S = 5/2 center, while others have ν(Fe-O) frequencies essentially unchanged from those of their parent iron(IV)-oxo complexes. The latter result suggests that the added electron does not occupy a d orbital with Fe═O antibonding character, requiring an S = 3/2 spin assignment for the nascent FeIII-O- species. In the latter cases, water is found to hydrogen bond to the FeIII-O- unit, resulting in a change from quartet to sextet spin state. Reactivity studies also demonstrate the extraordinary basicity of these iron(III)-oxo complexes. Our observations show that metal-oxo species at the boundary of the "Oxo Wall" are accessible, and the data provide a lead to detect iron(III)-oxo intermediates in biological and biomimetic reactions.
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Affiliation(s)
- Erik Andris
- Department of Organic Chemistry, Faculty of Science , Charles University , Hlavova 2030/8 , 128 43 Prague 2 , Czech Republic
| | - Rafael Navrátil
- Department of Organic Chemistry, Faculty of Science , Charles University , Hlavova 2030/8 , 128 43 Prague 2 , Czech Republic
| | - Juraj Jašík
- Department of Organic Chemistry, Faculty of Science , Charles University , Hlavova 2030/8 , 128 43 Prague 2 , Czech Republic
| | - Mayank Puri
- Department of Chemistry and Center for Metals in Biocatalysis , University of Minnesota , Minneapolis , Minnesota 55455 , United States
| | - Miquel Costas
- Departament de Quimica and Institute of Computational Chemistry and Catalysis (IQCC) , University of Girona , Campus Montilivi , Girona 17071 , Spain
| | - Lawrence Que
- Department of Chemistry and Center for Metals in Biocatalysis , University of Minnesota , Minneapolis , Minnesota 55455 , United States
| | - Jana Roithová
- Department of Organic Chemistry, Faculty of Science , Charles University , Hlavova 2030/8 , 128 43 Prague 2 , Czech Republic.,Institute for Molecules and Materials , Radboud University , Heyendaalseweg 135 , 6525 AJ Nijmegen , Netherlands
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21
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Isegawa M, Sharma AK, Ogo S, Morokuma K. Electron and Hydride Transfer in a Redox-Active NiFe Hydride Complex: A DFT Study. ACS Catal 2018. [DOI: 10.1021/acscatal.8b02368] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Miho Isegawa
- International Institute for Carbon-Neutral Energy Research (WPI-I2CNER), Kyushu University, 744 Moto-oka, Nishi-ku, Fukuoka 819-0395, Japan
- Fukui Institute for Fundamental Chemistry, Kyoto University, Kyoto 606-8103, Japan
| | - Akhilesh K. Sharma
- Fukui Institute for Fundamental Chemistry, Kyoto University, Kyoto 606-8103, Japan
| | - Seiji Ogo
- International Institute for Carbon-Neutral Energy Research (WPI-I2CNER), Kyushu University, 744 Moto-oka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Keiji Morokuma
- Fukui Institute for Fundamental Chemistry, Kyoto University, Kyoto 606-8103, Japan
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22
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Nam W, Lee YM, Fukuzumi S. Hydrogen Atom Transfer Reactions of Mononuclear Nonheme Metal-Oxygen Intermediates. Acc Chem Res 2018; 51:2014-2022. [PMID: 30179459 DOI: 10.1021/acs.accounts.8b00299] [Citation(s) in RCA: 84] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Abstract
Molecular oxygen (O2), the greenest oxidant, is kinetically stable in the oxidation of organic substrates due to its triplet ground state. In nature, O2 is reduced by two electrons with two protons to produce hydrogen peroxide (H2O2) and by four electrons with four protons to produce water (H2O) by oxidase and oxygenase metalloenzymes. In the process of the two-electron/two-proton and four-electron/four-proton reduction of O2 by metalloenzymes and their model compounds, metal-oxygen intermediates, such as metal-superoxido, -peroxido, -hydroperoxido, and -oxido species, are generated depending on the numbers of electrons and protons involved in the O2 activation reactions. The one-electron reduction of metal-oxygen intermediates is coupled with the binding of one proton. Such a hydrogen atom transfer (HAT) is defined as proton-coupled electron transfer (PCET), and there is a mechanistic dichotomy whether HAT occurs via a concerted PCET pathway or stepwise pathways [i.e., electron transfer followed by proton transfer (ET/PT) or proton transfer followed by electron transfer (PT/ET)]. The metal-oxygen intermediates formed are oxidants that can abstract a hydrogen atom (H-atom) from substrate C-H bonds. The H-atom abstraction from substrate C-H bonds by the metal-oxygen intermediates can also occur via a concerted PCET or stepwise PCET pathways. In the PCET reactions, a proton can be provided not only by the substrate itself but also by an acid that is added to a reaction solution. This Account describes the reactivities of metal-oxygen intermediates, such as metal-superoxido, -peroxido, -hydroperoxido, and -oxido complexes, in HAT reactions, focusing on the mechanisms of PCET reactions of metal-oxygen intermediates and on the mechanistic dichotomy of concerted versus stepwise pathways. Recent developments in the reactivity studies of Cr-, Fe-, and Cu-superoxido complexes in H-atom and hydride transfer reactions are discussed. Reactivities of an iron(III)-hydroperoxido complex and an iron(III)-peroxido complex binding redox-inactive metal ions are also summarized briefly. Mononuclear nonheme iron(IV)- and manganese(IV)-oxido complexes have shown high reactivities in HAT reactions, and their chemistry in PCET reactions is discussed intensively. Acid-catalyzed HAT reactions of metal-oxygen intermediates are also discussed to demonstrate a unified driving force dependence of logarithm of the rate constants of acid-catalyzed oxidation of various substrates by an iron(IV)-oxido complex and that of PCET from one-electron donors to the iron(IV)-oxido complex. PCET reactions of metal-oxygen intermediates are shown to proceed via a concerted pathway (one-step HAT) or a stepwise ET/PT pathway depending on the ET and PCET driving forces (-Δ G). The boundary conditions between concerted versus stepwise PCET pathways are clarified to demonstrate a switchover of the mechanisms only by changing the reaction temperature in the boundary conditions. This Account summarizes recent developments in the HAT reactions by synthetic mononuclear nonheme metal-oxygen intermediates over the past 10 years.
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Affiliation(s)
- Wonwoo Nam
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
- School of Chemistry and Chemical Engineering, Shaanxi Normal University, Xi’an 710119, P. R. China
| | - Yong-Min Lee
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
| | - Shunichi Fukuzumi
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea
- Graduate School of Science and Engineering, Meijo University, Nagoya, Aichi 468-8502, Japan
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23
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Cantú Reinhard FG, Fornarini S, Crestoni ME, de Visser SP. Hydrogen Atom vs. Hydride Transfer in Cytochrome P450 Oxidations: A Combined Mass Spectrometry and Computational Study. Eur J Inorg Chem 2018. [DOI: 10.1002/ejic.201800273] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Fabián G. Cantú Reinhard
- Manchester Institute of Biotechnology; School of Chemical Engineering and Analytical Science; University of Manchester; 131 Princess Street M1 7DN Manchester United Kingdom
| | - Simonetta Fornarini
- Dipartimento di Chimica e Tecnologie del Farmaco; Università di Roma “La Sapienza”; Piazzale Aldo Moro 5 00185 Roma Italy
| | - Maria Elisa Crestoni
- Dipartimento di Chimica e Tecnologie del Farmaco; Università di Roma “La Sapienza”; Piazzale Aldo Moro 5 00185 Roma Italy
| | - Sam P. de Visser
- Manchester Institute of Biotechnology; School of Chemical Engineering and Analytical Science; University of Manchester; 131 Princess Street M1 7DN Manchester United Kingdom
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24
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Archipowa N, Kutta RJ, Heyes DJ, Scrutton NS. Stepwise Hydride Transfer in a Biological System: Insights into the Reaction Mechanism of the Light-Dependent Protochlorophyllide Oxidoreductase. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201712729] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Affiliation(s)
- Nataliya Archipowa
- Manchester Institute of Biotechnology and School of Chemistry; The University of Manchester; 131 Princess Street Manchester M1 7DN UK
| | - Roger J. Kutta
- Manchester Institute of Biotechnology and School of Chemistry; The University of Manchester; 131 Princess Street Manchester M1 7DN UK
- Current address: Institut für Physikalische und Theoretische Chemie; Universität Regensburg; Universitätsstr. 31 93053 Regensburg Germany
| | - Derren J. Heyes
- Manchester Institute of Biotechnology and School of Chemistry; The University of Manchester; 131 Princess Street Manchester M1 7DN UK
| | - Nigel S. Scrutton
- Manchester Institute of Biotechnology and School of Chemistry; The University of Manchester; 131 Princess Street Manchester M1 7DN UK
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25
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Archipowa N, Kutta RJ, Heyes DJ, Scrutton NS. Stepwise Hydride Transfer in a Biological System: Insights into the Reaction Mechanism of the Light-Dependent Protochlorophyllide Oxidoreductase. Angew Chem Int Ed Engl 2018; 57:2682-2686. [PMID: 29363234 PMCID: PMC5861667 DOI: 10.1002/anie.201712729] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2017] [Revised: 01/22/2018] [Indexed: 11/24/2022]
Abstract
Hydride transfer plays a crucial role in a wide range of biological systems. However, its mode of action (concerted or stepwise) is still under debate. Light‐dependent NADPH: protochlorophyllide oxidoreductase (POR) catalyzes the stereospecific trans addition of a hydride anion and a proton across the C17−C18 double bond of protochlorophyllide. Time‐resolved absorption and emission spectroscopy were used to investigate the hydride transfer mechanism in POR. Apart from excited states of protochlorophyllide, three discrete intermediates were resolved, consistent with a stepwise mechanism that involves an initial electron transfer from NADPH. A subsequent proton‐coupled electron transfer followed by a proton transfer yield distinct different intermediates for wild type and the C226S variant, that is, initial hydride attaches to either C17 or C18, but ends in the same chlorophyllide stereoisomer. This work provides the first evidence of a stepwise hydride transfer in a biological system.
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Affiliation(s)
- Nataliya Archipowa
- Manchester Institute of Biotechnology and School of Chemistry, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK
| | - Roger J Kutta
- Manchester Institute of Biotechnology and School of Chemistry, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK.,Current address: Institut für Physikalische und Theoretische Chemie, Universität Regensburg, Universitätsstr. 31, 93053, Regensburg, Germany
| | - Derren J Heyes
- Manchester Institute of Biotechnology and School of Chemistry, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK
| | - Nigel S Scrutton
- Manchester Institute of Biotechnology and School of Chemistry, The University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK
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26
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Sebők-Nagy K, Rózsár D, Puskás LG, Balázs Á, Páli T. Electron paramagnetic resonance spectroscopic studies of the electron transfer reaction of Hantzsch ester and a pyrylium salt. RSC Adv 2018; 8:29924-29927. [PMID: 35547277 PMCID: PMC9085297 DOI: 10.1039/c8ra05693e] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2018] [Accepted: 08/13/2018] [Indexed: 12/01/2022] Open
Abstract
The oxidation of Hantzsch ester by a pyrylium cation takes place via electron–proton–electron transfer. The reaction was investigated with EPR spectroscopy using TEMPO and DMPO for inhibition and spin trapping, respectively, of the radicals appearing during the reaction. The present in-depth EPR study of the radical reactions of a NADH analogue indicate a complex electron transfer mechanism in the title reaction. The oxidation of Hantzsch ester by a pyrylium cation takes 3 place via electron–proton–electron transfer. The present in-depth EPR study of the radical reactions of a NADH analogue indicate a complex electron transfer mechanism in the title reaction.![]()
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Affiliation(s)
- K. Sebők-Nagy
- Institute of Biophysics
- Biological Research Centre
- Hungarian Academy of Sciences
- H-6726 Szeged
- Hungary
| | | | | | | | - T. Páli
- Institute of Biophysics
- Biological Research Centre
- Hungarian Academy of Sciences
- H-6726 Szeged
- Hungary
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27
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Pattanayak S, Jasniewski AJ, Rana A, Draksharapu A, Singh KK, Weitz A, Hendrich M, Que L, Dey A, Sen Gupta S. Spectroscopic and Reactivity Comparisons of a Pair of bTAML Complexes with Fe V═O and Fe IV═O Units. Inorg Chem 2017; 56:6352-6361. [PMID: 28481521 DOI: 10.1021/acs.inorgchem.7b00448] [Citation(s) in RCA: 39] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
In this report we compare the geometric and electronic structures and reactivities of [FeV(O)]- and [FeIV(O)]2- species supported by the same ancillary nonheme biuret tetraamido macrocyclic ligand (bTAML). Resonance Raman studies show that the Fe═O vibration of the [FeIV(O)]2- complex 2 is at 798 cm-1, compared to 862 cm-1 for the corresponding [FeV(O)]- species 3, a 64 cm-1 frequency difference reasonably reproduced by density functional theory calculations. These values are, respectively, the lowest and the highest frequencies observed thus far for nonheme high-valent Fe═O complexes. Extended X-ray absorption fine structure analysis of 3 reveals an Fe═O bond length of 1.59 Å, which is 0.05 Å shorter than that found in complex 2. The redox potentials of 2 and 3 are 0.44 V (measured at pH 12) and 1.19 V (measured at pH 7) versus normal hydrogen electrode, respectively, corresponding to the [FeIV(O)]2-/[FeIII(OH)]2- and [FeV(O)]-/[FeIV(O)]2- couples. Consistent with its higher potential (even after correcting for the pH difference), 3 oxidizes benzyl alcohol at pH 7 with a second-order rate constant that is 2500-fold bigger than that for 2 at pH 12. Furthermore, 2 exhibits a classical kinteic isotope effect (KIE) of 3 in the oxidation of benzyl alcohol to benzaldehyde versus a nonclassical KIE of 12 for 3, emphasizing the reactivity differences between 2 and 3.
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Affiliation(s)
- Santanu Pattanayak
- Chemical Engineering Division, CSIR-National Chemical Laboratory , Pune 411008, India
| | - Andrew J Jasniewski
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota , 207 Pleasant Street Southeast, Minneapolis, Minnesota 55455, United States
| | - Atanu Rana
- Department of Inorganic Chemistry, Indian Association for the Cultivation of Science , Kolkata 700032, India
| | - Apparao Draksharapu
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota , 207 Pleasant Street Southeast, Minneapolis, Minnesota 55455, United States
| | - Kundan K Singh
- Chemical Engineering Division, CSIR-National Chemical Laboratory , Pune 411008, India
| | - Andrew Weitz
- Department of Chemistry, Carnegie Mellon University , 4400 Fifth Avenue, Pittsburgh, Pennsylvania 15213, United States
| | - Michael Hendrich
- Department of Chemistry, Carnegie Mellon University , 4400 Fifth Avenue, Pittsburgh, Pennsylvania 15213, United States
| | - Lawrence Que
- Department of Chemistry and Center for Metals in Biocatalysis, University of Minnesota , 207 Pleasant Street Southeast, Minneapolis, Minnesota 55455, United States
| | - Abhishek Dey
- Department of Inorganic Chemistry, Indian Association for the Cultivation of Science , Kolkata 700032, India
| | - Sayam Sen Gupta
- Department of Chemical Sciences, Indian Institute of Science Education and Research-Kolkata , Mohanpur, West Bengal 741246, India
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28
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Devi T, Lee Y, Jung J, Sankaralingam M, Nam W, Fukuzumi S. A Chromium(III)‐Superoxo Complex as a Three‐Electron Oxidant with a Large Tunneling Effect in Multi‐Electron Oxidation of NADH Analogues. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201611709] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Affiliation(s)
- Tarali Devi
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
| | - Yong‐Min Lee
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
| | - Jieun Jung
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
| | | | - Wonwoo Nam
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
- State Key Laboratory for Oxo Synthesis and Selective Oxidation Lanzhou Institute of Chemical Physics Chinese Academy of Sciences Lanzhou 730000 China
| | - Shunichi Fukuzumi
- Department of Chemistry and Nano Science Ewha Womans University Seoul 03760 Korea
- Faculty of Science and Engineering SENTAN Japan Science and Technology Agency (JST) Meijo University Nagoya, Aichi 468-8502 Japan
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29
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Devi T, Lee YM, Jung J, Sankaralingam M, Nam W, Fukuzumi S. A Chromium(III)-Superoxo Complex as a Three-Electron Oxidant with a Large Tunneling Effect in Multi-Electron Oxidation of NADH Analogues. Angew Chem Int Ed Engl 2017; 56:3510-3515. [PMID: 28266771 DOI: 10.1002/anie.201611709] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2016] [Revised: 01/15/2017] [Indexed: 11/06/2022]
Abstract
Metal-superoxo species are involved in a variety of enzymatic oxidation reactions, and multi-electron oxidation of substrates is frequently observed in those enzymatic reactions. A CrIII -superoxo complex, [CrIII (O2 )(TMC)(Cl)]+ (1; TMC=1,4,8,11-tetramethyl-1,4,8,11-tetraazacyclotetradecane), is described that acts as a novel three-electron oxidant in the oxidation of dihydronicotinamide adenine dinucleotide (NADH) analogues. In the reactions of 1 with NADH analogues, a CrIV -oxo complex, [CrIV (O)(TMC)(Cl)]+ (2), is formed by a heterolytic O-O bond cleavage of a putative CrII -hydroperoxo complex, [CrII (OOH)(TMC)(Cl)], which is generated by hydride transfer from NADH analogues to 1. The comparison of the reactivity of NADH analogues with 1 and p-chloranil (Cl4 Q) indicates that oxidation of NADH analogues by 1 proceeds by proton-coupled electron transfer with a very large tunneling effect (for example, with a kinetic isotope effect of 470 at 233 K), followed by rapid electron transfer.
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Affiliation(s)
- Tarali Devi
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul, 03760, Korea
| | - Yong-Min Lee
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul, 03760, Korea
| | - Jieun Jung
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul, 03760, Korea
| | | | - Wonwoo Nam
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul, 03760, Korea.,State Key Laboratory for Oxo Synthesis and Selective Oxidation, Lanzhou Institute of Chemical Physics, Chinese Academy of Sciences, Lanzhou, 730000, China
| | - Shunichi Fukuzumi
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul, 03760, Korea.,Faculty of Science and Engineering, SENTAN Japan Science and Technology Agency (JST), Meijo University, Nagoya, Aichi, 468-8502, Japan
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30
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Affiliation(s)
- Norbert Hoffmann
- CNRS Université de Reims Champagne-Ardenne; ICMR; Université de Reims Champagne-Ardenne; B.P. 1039 51687 Reims France
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31
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Meng FK, Zhu XQ. Elemental steps of the thermodynamics of dihydropyrimidine: a new class of organic hydride donors. Org Biomol Chem 2016; 15:197-206. [PMID: 27892585 DOI: 10.1039/c6ob02195f] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
25 Dihydropyrimidine derivatives, a new class of organo-hydrides, were designed and synthesized by the Biginelli reaction. For the first time, the thermodynamic driving forces of the six elemental steps to obtain a hydride in acetonitrile were determined by isothermal titration and electrochemical methods, respectively. The effects of molecular structures and substituents on these thermodynamic parameters were examined, uncovering some interesting structure-reactivity relationships. Both the thermodynamic and kinetic studies show that the hydride transfer from dihydropyrimidines to 9-phenylxanthylium (PhXn+ClO4-) prefers a concerted mechanism.
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Affiliation(s)
- Fan-Kun Meng
- The State Key Laboratory of Elemento-Organic Chemistry, Department of Chemistry, Collaborative Innovation Center of Chemical Science and Engineering, Nankai University, Tianjin 300071, China.
| | - Xiao-Qing Zhu
- The State Key Laboratory of Elemento-Organic Chemistry, Department of Chemistry, Collaborative Innovation Center of Chemical Science and Engineering, Nankai University, Tianjin 300071, China.
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32
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Suenobu T, Shibata S, Fukuzumi S. Catalytic Formation of Hydrogen Peroxide from Coenzyme NADH and Dioxygen with a Water-Soluble Iridium Complex and a Ubiquinone Coenzyme Analogue. Inorg Chem 2016; 55:7747-54. [PMID: 27403568 DOI: 10.1021/acs.inorgchem.6b01220] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
A ubiquinone coenzyme analogue (Q0: 2,3-dimethoxy-5-methyl-1,4-benzoquinone) was reduced by coenzyme NADH to yield the corresponding reduced form of Q0 (Q0H2) in the presence of a catalytic amount of a [C,N] cyclometalated organoiridium complex (1: [Ir(III)(Cp*)(4-(1H-pyrazol-1-yl-κN(2))benzoic acid-κC(3))(H2O)]2SO4) in water at ambient temperature as observed in the respiratory chain complex I (Complex I). In the catalytic cycle, the reduction of 1 by NADH produces the corresponding iridium hydride complex that in turn reduces Q0 to produce Q0H2. Q0H2 reduced dioxygen to yield hydrogen peroxide (H2O2) under slightly basic conditions. Catalytic generation of H2O2 was made possible in the reaction of O2 with NADH as the functional expression of NADH oxidase in white blood cells utilizing the redox cycle of Q0 as well as 1 for the first time in a nonenzymatic homogeneous reaction system.
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Affiliation(s)
- Tomoyoshi Suenobu
- Department of Material and Life Science, Graduate School of Engineering, Osaka University, ALCA and SENTAN, Japan Science and Technology , Suita, Osaka 565-0871, Japan
| | - Satoshi Shibata
- Department of Material and Life Science, Graduate School of Engineering, Osaka University, ALCA and SENTAN, Japan Science and Technology , Suita, Osaka 565-0871, Japan
| | - Shunichi Fukuzumi
- Department of Material and Life Science, Graduate School of Engineering, Osaka University, ALCA and SENTAN, Japan Science and Technology , Suita, Osaka 565-0871, Japan.,Department of Chemistry and Nano Science, Ewha Womans University , Seoul 120-750, Korea.,Faculty of Science and Engineering, Meijo University, ALCA and SENTAN, Japan Science and Technology Agency , Nagoya, Aichi 468-0073, Japan
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33
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Shen GB, Xia K, Li XT, Li JL, Fu YH, Yuan L, Zhu XQ. Prediction of Kinetic Isotope Effects for Various Hydride Transfer Reactions Using a New Kinetic Model. J Phys Chem A 2016; 120:1779-99. [DOI: 10.1021/acs.jpca.5b10135] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Guang-Bin Shen
- Department of Chemistry, The State Key Laboratory
of Elemento-Organic Chemistry and the ‡Collaborative Innovation Center
of Chemical Science and Engineering, Nankai University, Tianjin 300071, China
| | - Ke Xia
- Department of Chemistry, The State Key Laboratory
of Elemento-Organic Chemistry and the ‡Collaborative Innovation Center
of Chemical Science and Engineering, Nankai University, Tianjin 300071, China
| | - Xiu-Tao Li
- Department of Chemistry, The State Key Laboratory
of Elemento-Organic Chemistry and the ‡Collaborative Innovation Center
of Chemical Science and Engineering, Nankai University, Tianjin 300071, China
| | - Jun-Ling Li
- Department of Chemistry, The State Key Laboratory
of Elemento-Organic Chemistry and the ‡Collaborative Innovation Center
of Chemical Science and Engineering, Nankai University, Tianjin 300071, China
| | - Yan-Hua Fu
- Department of Chemistry, The State Key Laboratory
of Elemento-Organic Chemistry and the ‡Collaborative Innovation Center
of Chemical Science and Engineering, Nankai University, Tianjin 300071, China
| | - Lin Yuan
- Department of Chemistry, The State Key Laboratory
of Elemento-Organic Chemistry and the ‡Collaborative Innovation Center
of Chemical Science and Engineering, Nankai University, Tianjin 300071, China
| | - Xiao-Qing Zhu
- Department of Chemistry, The State Key Laboratory
of Elemento-Organic Chemistry and the ‡Collaborative Innovation Center
of Chemical Science and Engineering, Nankai University, Tianjin 300071, China
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34
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Dhuri SN, Lee YM, Seo MS, Cho J, Narulkar DD, Fukuzumi S, Nam W. Mechanistic insights into the reactions of hydride transfer versus hydrogen atom transfer by a trans-dioxoruthenium(VI) complex. Dalton Trans 2016; 44:7634-42. [PMID: 25811701 DOI: 10.1039/c5dt00809c] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
A mononuclear high-valent trans-dioxoruthenium(VI) complex, trans-[Ru(VI)(TMC)(O)2](2+) (TMC = 1,4,8,11-tetramethyl-1,4,8,11-tetraazacyclotetradecane), was synthesized and characterized by various spectroscopic techniques and X-ray crystallography. The reactivity of the trans-[Ru(VI)(TMC)(O)2](2+) complex was investigated in hydride transfer and hydrogen atom transfer reactions. The mechanism of hydride transfer from dihydronicotinamide adenine dinucleotide (NADH) analogues to trans-[Ru(VI)(TMC)(O)2](2+), which proceeds via a proton-coupled electron transfer (PCET), followed by a rapid electron transfer (ET), has been proposed by the observation of a good linear correlation between the log rate constants of trans-[Ru(VI)(TMC)(O)2](2+) and p-chloranil (Cl4Q) and a large kinetic isotope effect (KIE) value of 13(1). In the case of the oxidation of alkyl hydrocarbons by the trans-[Ru(VI)(TMC)(O)2](2+) complex, the second-order rate constants were dependent on the C-H bond dissociation energy (BDE) of the substrates, and a large KIE value of 26(2) was obtained in the oxidation of xanthene and deuterated xanthene-d2 by the trans-[Ru(VI)(TMC)(O)2](2+) complex, indicating that the C-H bond activation of alkyl hydrocarbons proceeds via an H-atom abstraction in the rate-determining step.
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Affiliation(s)
- Sunder N Dhuri
- Department of Chemistry and Nano Science, Center for Biomimetic System, Ewha Womans University, Seoul 120-750, Korea.
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35
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Ricciardi G, Baerends EJ, Rosa A. Charge Effects on the Reactivity of Oxoiron(IV) Porphyrin Species: A DFT Analysis of Methane Hydroxylation by Polycationic Compound I and Compound II Mimics. ACS Catal 2015. [DOI: 10.1021/acscatal.5b02357] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Giampaolo Ricciardi
- Dipartimento di Scienze, Università della Basilicata, Viale dell’Ateneo Lucano 10, 85100 Potenza, Potenza, Italy
| | - Evert Jan Baerends
- Theoretical Chemistry, FEW, VU University Amsterdam, De Boelelaan 1083, 1081 HV Amsterdam, The Netherlands
| | - Angela Rosa
- Dipartimento di Scienze, Università della Basilicata, Viale dell’Ateneo Lucano 10, 85100 Potenza, Potenza, Italy
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36
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Lei NP, Fu YH, Zhu XQ. Elemental step thermodynamics of various analogues of indazolium alkaloids to obtaining hydride in acetonitrile. Org Biomol Chem 2015; 13:11472-85. [PMID: 26451708 DOI: 10.1039/c5ob01715g] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A series of analogues of indazolium alkaloids were designed and synthesized. The thermodynamic driving forces of the 6 elemental steps for the analogues of indazolium alkaloids to obtain hydride in acetonitrile were determined using an isothermal titration calorimeter (ITC) and electrochemical methods, respectively. The effects of molecular structure and substituents on the thermodynamic driving forces of the 6 steps were examined. Meanwhile, the oxidation mechanism of NADH coenzyme by indazolium alkaloids was examined using the chemical mimic method. The result shows that the oxidation of NADH coenzyme by indazolium alkaloids in vivo takes place by one-step concerted hydride transfer mechanism.
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Affiliation(s)
- Nan-Ping Lei
- The State Key Laboratory of Elemento-Organic Chemistry, Department of Chemistry, Collaborative Innovation Center of Chemical Science and Engineering, Nankai University, Tianjin 300071, China.
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37
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Patel J, Majee K, Ahma Combining Dot Below D E, Tanaka K, Padhi SK. [Ru(V)(NCN-Me)(bpy)([double bond, length as m-dash]O)](3+) Mediates efficient C-H bond oxidation from NADH analogs in aqueous media rather than water oxidation. Dalton Trans 2015; 44:920-3. [PMID: 25479040 DOI: 10.1039/c4dt02827a] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
[Ru(V)[double bond, length as m-dash]O](3+) and [Ru(VI)[double bond, length as m-dash]O](4+) generated from [Ru(II)(NCN-Me)(bpy)(H2O)](PF6)2 (where NCN-Me is the neutral N-methyl-3,5-di(2-pyridyl)pyridinium iodide after deprotonation of the C-H bond) play a selective role in the C-H bond oxidation of 2-(pyridin-2-yl)-9,10-dihydroacridine (PADHH) and water oxidation, respectively.
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Affiliation(s)
- Jully Patel
- Department of Applied Chemistry, Indian School of Mines, Dhanbad, 826004, India.
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38
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Messiha HL, Wongnate T, Chaiyen P, Jones AR, Scrutton NS. Magnetic field effects as a result of the radical pair mechanism are unlikely in redox enzymes. J R Soc Interface 2015; 12:rsif.2014.1155. [PMID: 25505136 PMCID: PMC4305418 DOI: 10.1098/rsif.2014.1155] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022] Open
Abstract
Environmental exposure to electromagnetic fields is potentially carcinogenic. The radical pair mechanism is considered the most feasible mechanism of interaction between weak magnetic fields encountered in our environment and biochemical systems. Radicals are abundant in biology, both as free radicals and reaction intermediates in enzyme mechanisms. The catalytic cycles of some flavin-dependent enzymes are either known or potentially involve radical pairs. Here, we have investigated the magnetic field sensitivity of a number of flavoenzymes with important cellular roles. We also investigated the magnetic field sensitivity of a model system involving stepwise reduction of a flavin analogue by a nicotinamide analogue—a reaction known to proceed via a radical pair. Under the experimental conditions used, magnetic field sensitivity was not observed in the reaction kinetics from stopped-flow measurements in any of the systems studied. Although widely implicated in radical pair chemistry, we conclude that thermally driven, flavoenzyme-catalysed reactions are unlikely to be influenced by exposure to external magnetic fields.
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Affiliation(s)
- Hanan L Messiha
- Manchester Institute of Biotechnology, University of Manchester, Manchester, UK Faculty of Life Sciences, University of Manchester, Manchester, UK
| | - Thanyaporn Wongnate
- Department of Biochemistry and Centre for Excellence in Protein Structure and Function, Faculty of Science, Mahidol University, Bangkok, Thailand
| | - Pimchai Chaiyen
- Department of Biochemistry and Centre for Excellence in Protein Structure and Function, Faculty of Science, Mahidol University, Bangkok, Thailand
| | - Alex R Jones
- Manchester Institute of Biotechnology, University of Manchester, Manchester, UK Photon Science Institute and School of Chemistry, University of Manchester, Manchester, UK
| | - Nigel S Scrutton
- Manchester Institute of Biotechnology, University of Manchester, Manchester, UK Faculty of Life Sciences, University of Manchester, Manchester, UK
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39
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Cramer SA, Hernández Sánchez R, Brakhage DF, Jenkins DM. Probing the role of an Fe(IV) tetrazene in catalytic aziridination. Chem Commun (Camb) 2015; 50:13967-70. [PMID: 25265968 DOI: 10.1039/c4cc05124f] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
An iron(IV) tetrazene complex has been synthesized that is an important addition to a previously proposed catalytic aziridination cycle. It provides two key insights about the aziridination: an iron(IV) imide is formed and this imide can bind an additional ligand in the cis position.
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Affiliation(s)
- S Alan Cramer
- Department of Chemistry, University of Tennessee, Knoxville, Tennessee 37996, USA.
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40
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Zhang Y, Biggs JD, Mukamel S. Characterizing the Intermediates Compound I and II in the Cytochrome P450 Catalytic Cycle with Nonlinear X-ray Spectroscopy: A Simulation Study. Chemphyschem 2015; 16:2006-14. [PMID: 25873009 DOI: 10.1002/cphc.201500064] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2015] [Revised: 02/24/2015] [Indexed: 11/06/2022]
Abstract
Cytochrome P450 enzymes are an important family of biocatalysts that oxidize chemically inert CH bonds. There are many unresolved questions regarding the catalytic reaction intermediates, in particular P450 Compound I (Cpd-I) and II (Cpd-II). By using simple molecular models, we simulate various X-ray spectroscopy signals, including X-ray absorption near-edge structure (XANES), resonant inelastic X-ray scattering (RIXS), and stimulated X-ray Raman spectroscopy (SXRS) of the low- and high-spin states of Cpd-I and II. Characteristic peak patterns are presented and connected to the corresponding electronic structures. These X-ray spectroscopy techniques are complementary to more conventional infrared and optical spectroscopy and they help to elucidate the evolving electronic structures of transient species along the reaction path.
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Affiliation(s)
- Yu Zhang
- Dept. of Chemistry, University of California, 450 Rowland Hall, Irvine, California 92697 (USA).
| | - Jason D Biggs
- Dept. of Chemistry, University of California, 450 Rowland Hall, Irvine, California 92697 (USA)
| | - Shaul Mukamel
- Dept. of Chemistry, University of California, 450 Rowland Hall, Irvine, California 92697 (USA).
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41
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Yoon H, Lee YM, Nam W, Fukuzumi S. Hydride transfer from NADH analogues to a nonheme manganese(IV)-oxo complex via rate-determining electron transfer. Chem Commun (Camb) 2015; 50:12944-6. [PMID: 25220234 DOI: 10.1039/c4cc05313c] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Hydride transfer from NADH analogues to a nonheme Mn(iv)-oxo complex, [(Bn-TPEN)Mn(IV)(O)](2+), proceeds via a rate-determining electron transfer step with no deuterium kinetic isotope effect (KIE = 1.0 ± 0.1); a charge-transfer complex formed between the Mn(IV)(O) complex and NADH analogues is involved in the hydride transfer reaction.
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Affiliation(s)
- Heejung Yoon
- Department of Material and Life Science Graduate School of Engineering, Osaka University and ALCA (JST), 2-1 Yamada-oka, Suita, Osaka 565-0871, Japan.
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42
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D'Souza F, Imahori H. Preface — Special Issue in Honor of Professor Shunichi Fukuzumi. J PORPHYR PHTHALOCYA 2015. [DOI: 10.1142/s1088424615020010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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43
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Lakk-Bogáth D, Speier G, Surducan M, Silaghi-Dumitrescu R, Jalila Simaan A, Faure B, Kaizer J. Comparison of heme and nonheme iron-based 1-aminocyclopropane-1-carboxylic acid oxidase mimics: kinetic, mechanistic and computational studies. RSC Adv 2015. [DOI: 10.1039/c4ra08762c] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
Kinetic, mechanistic and computational studies of the H2O2oxidation of 1-aminocyclopropane-1-carboxylic acid to ethylene by heme- and nonheme-type iron complexes are described as biomimics of 1-aminocyclopropane-1-carboxylic acid oxidase.
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Affiliation(s)
- Dóra Lakk-Bogáth
- Department of Chemistry
- University of Pannonia
- H-8200 Veszprém
- Hungary
| | - Gábor Speier
- Department of Chemistry
- University of Pannonia
- H-8200 Veszprém
- Hungary
| | - Mihai Surducan
- Department of Chemistry
- Babes-Bolyai University
- RO-400024 Cluj-Napoca
- Romania
| | | | - A. Jalila Simaan
- Aix-Marseille Université
- CNRS
- Central Marseille
- iSm2 UMR 7313
- Marseille
| | - Bruno Faure
- Aix-Marseille Université
- CNRS
- Central Marseille
- iSm2 UMR 7313
- Marseille
| | - József Kaizer
- Department of Chemistry
- University of Pannonia
- H-8200 Veszprém
- Hungary
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44
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Fukuzumi S. Electron transfer and catalysis with high-valent metal-oxo complexes. Dalton Trans 2015; 44:6696-705. [DOI: 10.1039/c5dt00204d] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
Abstract
High-valent metal-oxo complexes are produced by thermal and photoinduced electron-transfer reactions, acting as catalysts for oxygenation of substrates using water or dioxygen as an oxygen source.
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Affiliation(s)
- Shunichi Fukuzumi
- Department of Material and Life Science
- Division of Advanced Science and Biotechnology
- Graduate School of Engineering
- Osaka University
- ALCA
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45
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Barbieri A, De Gennaro M, Di Stefano S, Lanzalunga O, Lapi A, Mazzonna M, Olivo G, Ticconi B. Isotope effect profiles in the N-demethylation of N,N-dimethylanilines: a key to determine the pKa of nonheme Fe(iii)–OH complexes. Chem Commun (Camb) 2015; 51:5032-5. [DOI: 10.1039/c5cc00411j] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
pKa of [(N4Py)FeIII–OH]2+ is obtained from the kinetic isotope effect profiles in the N-demethylation of N,N-dimethylanilines promoted by [(N4Py)FeIVO]2+.
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Affiliation(s)
- Alessia Barbieri
- Dipartimento di Chimica
- Sapienza Università di Roma and Istituto CNR di Metodologie Chimiche (IMC-CNR)
- Sezione Meccanismi di Reazione
- c/o Dipartimento di Chimica
- Sapienza Università di Roma
| | - Martina De Gennaro
- Dipartimento di Chimica
- Sapienza Università di Roma and Istituto CNR di Metodologie Chimiche (IMC-CNR)
- Sezione Meccanismi di Reazione
- c/o Dipartimento di Chimica
- Sapienza Università di Roma
| | - Stefano Di Stefano
- Dipartimento di Chimica
- Sapienza Università di Roma and Istituto CNR di Metodologie Chimiche (IMC-CNR)
- Sezione Meccanismi di Reazione
- c/o Dipartimento di Chimica
- Sapienza Università di Roma
| | - Osvaldo Lanzalunga
- Dipartimento di Chimica
- Sapienza Università di Roma and Istituto CNR di Metodologie Chimiche (IMC-CNR)
- Sezione Meccanismi di Reazione
- c/o Dipartimento di Chimica
- Sapienza Università di Roma
| | - Andrea Lapi
- Dipartimento di Chimica
- Sapienza Università di Roma and Istituto CNR di Metodologie Chimiche (IMC-CNR)
- Sezione Meccanismi di Reazione
- c/o Dipartimento di Chimica
- Sapienza Università di Roma
| | - Marco Mazzonna
- Dipartimento di Chimica
- Sapienza Università di Roma and Istituto CNR di Metodologie Chimiche (IMC-CNR)
- Sezione Meccanismi di Reazione
- c/o Dipartimento di Chimica
- Sapienza Università di Roma
| | - Giorgio Olivo
- Dipartimento di Chimica
- Sapienza Università di Roma and Istituto CNR di Metodologie Chimiche (IMC-CNR)
- Sezione Meccanismi di Reazione
- c/o Dipartimento di Chimica
- Sapienza Università di Roma
| | - Barbara Ticconi
- Dipartimento di Chimica
- Sapienza Università di Roma and Istituto CNR di Metodologie Chimiche (IMC-CNR)
- Sezione Meccanismi di Reazione
- c/o Dipartimento di Chimica
- Sapienza Università di Roma
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46
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Nishida Y, Lee YM, Nam W, Fukuzumi S. Autocatalytic formation of an iron(IV)-oxo complex via scandium ion-promoted radical chain autoxidation of an iron(II) complex with dioxygen and tetraphenylborate. J Am Chem Soc 2014; 136:8042-9. [PMID: 24809677 DOI: 10.1021/ja502732p] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
Abstract
A non-heme iron(IV)-oxo complex, [(TMC)Fe(IV)(O)](2+) (TMC = 1,4,8,11-tetramethyl-1,4,8,11-tetraazacyclotetradecane), was formed by oxidation of an iron(II) complex ([(TMC)Fe(II)](2+)) with dioxygen (O2) and tetraphenylborate (BPh4(-)) in the presence of scandium triflate (Sc(OTf)3) in acetonitrile at 298 K via autocatalytic radical chain reactions rather than by a direct O2 activation pathway. The autocatalytic radical chain reaction is initiated by scandium ion-promoted electron transfer from BPh4(-) to [(TMC)Fe(IV)(O)](2+) to produce phenyl radical (Ph(•)). The chain propagation step is composed of the addition of O2 to Ph(•) and the reduction of the resulting phenylperoxyl radical (PhOO(•)) by scandium ion-promoted electron transfer from BPh4(-) to PhOO(•) to produce phenyl hydroperoxide (PhOOH), accompanied by regeneration of phenyl radical. PhOOH reacts with [(TMC)Fe(II)](2+) to yield phenol (PhOH) and [(TMC)Fe(IV)(O)](2+). Biphenyl (Ph-Ph) was formed via the radical chain autoxidation of BPh3 by O2. The induction period of the autocatalytic radical chain reactions was shortened by addition of a catalytic amount of [(TMC)Fe(IV)(O)](2+), whereas addition of a catalytic amount of ferrocene that can reduce [(TMC)Fe(IV)(O)](2+) resulted in elongation of the induction period. Radical chain autoxidation of BPh4(-) by O2 also occurred in the presence of Sc(OTf)3 without [(TMC)Fe(IV)(O)](2+), initiating the autocatalytic oxidation of [(TMC)Fe(II)](2+) with O2 and BPh4(-) to yield [(TMC)Fe(IV)(O)](2+). Thus, the general view for formation of non-heme iron(IV)-oxo complexes via O2-binding iron species (e.g., Fe(III)(O2(•-))) without contribution of autocatalytic radical chain reactions should be viewed with caution.
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Affiliation(s)
- Yusuke Nishida
- Department of Material and Life Science, Graduate School of Engineering, Osaka University, ALCA, Japan Science and Technology (JST) , Suita, Osaka 565-0871, Japan
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47
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Bittner MM, Lindeman SV, Popescu CV, Fiedler AT. Dioxygen reactivity of biomimetic Fe(II) complexes with noninnocent catecholate, o-aminophenolate, and o-phenylenediamine ligands. Inorg Chem 2014; 53:4047-61. [PMID: 24697567 PMCID: PMC3998776 DOI: 10.1021/ic403126p] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2013] [Indexed: 11/28/2022]
Abstract
This study describes the O2 reactivity of a series of high-spin mononuclear Fe(II) complexes each containing the facially coordinating tris(4,5-diphenyl-1-methylimidazol-2-yl)phosphine ((Ph2)TIP) ligand and one of the following bidentate, redox-active ligands: 4-tert-butylcatecholate ((tBu)CatH(-)), 4,6-di-tert-butyl-2-aminophenolate ((tBu2)APH(-)), or 4-tert-butyl-1,2-phenylenediamine ((tBu)PDA). The preparation and X-ray structural characterization of [Fe(2+)((Ph2)TIP)((tBu)CatH)]OTf, [3]OTf and [Fe(2+)((Ph2)TIP)((tBu)PDA)](OTf)2, [4](OTf)2 are described here, whereas [Fe(2+)((Ph2)TIP)((tBu2)APH)]OTf, [2]OTf was reported in our previous paper [Bittner et al., Chem.-Eur. J. 2013, 19, 9686-9698]. These complexes mimic the substrate-bound active sites of nonheme iron dioxygenases, which catalyze the oxidative ring-cleavage of aromatic substrates like catechols and aminophenols. Each complex is oxidized in the presence of O2, and the geometric and electronic structures of the resulting complexes were examined with spectroscopic (absorption, EPR, Mössbauer, resonance Raman) and density functional theory (DFT) methods. Complex [3]OTf reacts rapidly with O2 to yield the ferric-catecholate species [Fe(3+)((Ph2)TIP)((tBu)Cat)](+) (3(ox)), which undergoes further oxidation to generate an extradiol cleavage product. In contrast, complex [4](2+) experiences a two-electron (2e(-)), ligand-based oxidation to give [Fe(2+)((Ph2)TIP)((tBu)DIBQ)](2+) (4(ox)), where DIBQ is o-diiminobenzoquinone. The reaction of [2](+) with O2 is also a 2e(-) process, yet in this case both the Fe center and (tBu2)AP ligand are oxidized; the resulting complex (2(ox)) is best described as [Fe(3+)((Ph2)TIP)((tBu2)ISQ)](+), where ISQ is o-iminobenzosemiquinone. Thus, the oxidized complexes display a remarkable continuum of electronic structures ranging from [Fe(3+)(L(2-))](+) (3(ox)) to [Fe(3+)(L(•-))](2+) (2(ox)) to [Fe(2+)(L(0))](2+) (4(ox)). Notably, the O2 reaction rates vary by a factor of 10(5) across the series, following the order [3](+) > [2](+) > [4](2+), even though the complexes have similar structures and Fe(3+/2+) redox potentials. To account for the kinetic data, we examined the relative abilities of the title complexes to bind O2 and participate in H-atom transfer reactions. We conclude that the trend in O2 reactivity can be rationalized by accounting for the role of proton transfer(s) in the overall reaction.
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Affiliation(s)
- Michael M. Bittner
- Department of Chemistry, Marquette University, Milwaukee, Wisconsin 53201, United States
| | - Sergey V. Lindeman
- Department of Chemistry, Marquette University, Milwaukee, Wisconsin 53201, United States
| | - Codrina V. Popescu
- Department of Chemistry, Ursinus College, Collegeville, Pennsylvania 19426, United States
| | - Adam T. Fiedler
- Department of Chemistry, Marquette University, Milwaukee, Wisconsin 53201, United States
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Nam W, Lee YM, Fukuzumi S. Tuning reactivity and mechanism in oxidation reactions by mononuclear nonheme iron(IV)-oxo complexes. Acc Chem Res 2014; 47:1146-54. [PMID: 24524675 DOI: 10.1021/ar400258p] [Citation(s) in RCA: 383] [Impact Index Per Article: 38.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Mononuclear nonheme iron enzymes generate high-valent iron(IV)-oxo intermediates that effect metabolically important oxidative transformations in the catalytic cycle of dioxygen activation. In 2003, researchers first spectroscopically characterized a mononuclear nonheme iron(IV)-oxo intermediate in the reaction of taurine: α-ketogultarate dioxygenase (TauD). This nonheme iron enzyme with an iron active center was coordinated to a 2-His-1- carboxylate facial triad motif. In the same year, researchers obtained the first crystal structure of a mononuclear nonheme iron(IV)-oxo complex bearing a macrocyclic supporting ligand, [(TMC)Fe(IV)(O)](2+) (TMC = 1,4,8,11-tetramethyl-1,4,8,11-tetraazacyclotetradecene), in studies that mimicked the biological enzymes. With these breakthrough results, many other studies have examined mononuclear nonheme iron(IV)-oxo intermediates trapped in enzymatic reactions or synthesized in biomimetic reactions. Over the past decade, researchers in the fields of biological, bioinorganic, and oxidation chemistry have extensively investigated the structure, spectroscopy, and reactivity of nonheme iron(IV)-oxo species, leading to a wealth of information from these enzymatic and biomimetic studies. This Account summarizes the reactivity and mechanisms of synthetic mononuclear nonheme iron(IV)-oxo complexes in oxidation reactions and examines factors that modulate their reactivities and change their reaction mechanisms. We focus on several reactions including the oxidation of organic and inorganic compounds, electron transfer, and oxygen atom exchange with water by synthetic mononuclear nonheme iron(IV)-oxo complexes. In addition, we recently observed that the C-H bond activation by nonheme iron(IV)-oxo and other nonheme metal(IV)-oxo complexes does not follow the H-atom abstraction/oxygen-rebound mechanism, which has been well-established in heme systems. The structural and electronic effects of supporting ligands on the oxidizing power of iron(IV)-oxo complexes are significant in these reactions. However, the difference in spin states between nonheme iron(IV)-oxo complexes with an octahedral geometry (with an S = 1 intermediate-spin state) or a trigonal bipyramidal (TBP) geometry (with an S = 2 high-spin state) does not lead to a significant change in reactivity in biomimetic systems. Thus, the importance of the high-spin state of iron(IV)-oxo species in nonheme iron enzymes remains unexplained. We also discuss how the axial and equatorial ligands and binding of redox-inactive metal ions and protons to the iron-oxo moiety influence the reactivities of the nonheme iron(IV)-oxo complexes. We emphasize how these changes can enhance the oxidizing power of nonheme metal(IV)-oxo complexes in oxygen atom transfer and electron-transfer reactions remarkably. This Account demonstrates great advancements in the understanding of the chemistry of mononuclear nonheme iron(IV)-oxo intermediates within the last 10 years.
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Affiliation(s)
- Wonwoo Nam
- Department
of Chemistry and Nano Science, Department of Bioinspired Science,
Center for Biomimetic Systems, Ewha Womans University, Seoul 120-750, Korea
| | - Yong-Min Lee
- Department
of Chemistry and Nano Science, Department of Bioinspired Science,
Center for Biomimetic Systems, Ewha Womans University, Seoul 120-750, Korea
| | - Shunichi Fukuzumi
- Department
of Chemistry and Nano Science, Department of Bioinspired Science,
Center for Biomimetic Systems, Ewha Womans University, Seoul 120-750, Korea
- Department
of Material and Life Science, Graduate School of Engineering, Osaka University, ALCA, Japan Science
and Technology Agency, Suita, Osaka 565-0871, Japan
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Song N, Zhang MT, Binstead RA, Fang Z, Meyer TJ. Multiple pathways in the oxidation of a NADH analogue. Inorg Chem 2014; 53:4100-5. [PMID: 24716437 DOI: 10.1021/ic500072e] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Abstract
Oxidation of the NADH analogue, N-benzyl-1,4-dihydronicotinamide (BNAH), by the 1e(-) acceptor, [Os(dmb)3](3+), and 2e(-)/2H(+) acceptor, benzoquinone (Q), has been investigated in aqueous solutions over extended pH and buffer concentration ranges by application of a double-mixing stopped-flow technique in order to explore the redox pathways available to this important redox cofactor. Our results indicate that oxidation by quinone is dominated by hydride transfer, and a pathway appears with added acids involving concerted hydride-proton transfer (HPT) in which synchronous transfer of hydride to one O-atom at Q and proton transfer to the second occurs driven by the formation of the stable H2Q product. Oxidation by [Os(dmb)3](3+) occurs by outer-sphere electron transfer including a pathway involving ion-pair preassociation of HPO4(2-) with the complex that may also involve a concerted proton transfer.
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Affiliation(s)
- Na Song
- Department of Chemistry, University of North Carolina at Chapel Hill , Chapel Hill, North Carolina 27599-3290, United States
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