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Oksdath-Mansilla G, Hajj V, Andrada DM, Argüello JE, Bonin J, Robert M, Peñéñory AB. Photoremoval of Protecting Groups: Mechanistic Aspects of 1,3-Dithiane Conversion to a Carbonyl Group. J Org Chem 2015; 80:2733-9. [DOI: 10.1021/jo502953t] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Gabriela Oksdath-Mansilla
- INFIQC−CONICET-UNC,
Departmento de Química Orgánica, Facultad de Ciencias
Químicas, Universidad Nacional de Córdoba, Ciudad Universitaria, X5000HUA Córdoba, Argentina
| | - Viviane Hajj
- Laboratoire
d’Electrochimie Moléculaire, Unité Mixte de Recherche
Université - CNRS No 7591, Université Paris Diderot, Sorbonne Paris Cité, Bâtiment Lavoisier, 15 rue Jean Antoine
de Baïf, 75205 Paris Cedex 13, France
| | - Diego M. Andrada
- Fachbereich
Chemie, Philipps-Universität Marburg, Hans-Meerwein-Strasse, D-35032 Marburg, Germany
| | - Juan E. Argüello
- INFIQC−CONICET-UNC,
Departmento de Química Orgánica, Facultad de Ciencias
Químicas, Universidad Nacional de Córdoba, Ciudad Universitaria, X5000HUA Córdoba, Argentina
| | - Julien Bonin
- Laboratoire
d’Electrochimie Moléculaire, Unité Mixte de Recherche
Université - CNRS No 7591, Université Paris Diderot, Sorbonne Paris Cité, Bâtiment Lavoisier, 15 rue Jean Antoine
de Baïf, 75205 Paris Cedex 13, France
| | - Marc Robert
- Laboratoire
d’Electrochimie Moléculaire, Unité Mixte de Recherche
Université - CNRS No 7591, Université Paris Diderot, Sorbonne Paris Cité, Bâtiment Lavoisier, 15 rue Jean Antoine
de Baïf, 75205 Paris Cedex 13, France
| | - Alicia B. Peñéñory
- INFIQC−CONICET-UNC,
Departmento de Química Orgánica, Facultad de Ciencias
Químicas, Universidad Nacional de Córdoba, Ciudad Universitaria, X5000HUA Córdoba, Argentina
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2
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Lanzalunga O, Lapi A. Recent photo- and radiation chemical studies of sulfur radical cations. J Sulphur Chem 2011. [DOI: 10.1080/17415993.2011.619536] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
Affiliation(s)
- Osvaldo Lanzalunga
- a Dipartimento di Chimica and IMC-CNR, Sezione Meccanismi di Reazione , Università “La Sapienza” , P.le A. Moro, 5 I-00185 , Rome , Italy
| | - Andrea Lapi
- a Dipartimento di Chimica and IMC-CNR, Sezione Meccanismi di Reazione , Università “La Sapienza” , P.le A. Moro, 5 I-00185 , Rome , Italy
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3
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Photoinduced electron transfer reactions of pyrylium derivatives with organic sulfides in acetonitrile. J Photochem Photobiol A Chem 2009. [DOI: 10.1016/j.jphotochem.2008.10.019] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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4
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Chen X, Zhang L, Wang Z, Li J, Wang W, Bu Y. Relay Stations for Electron Hole Migration in Peptides: Possibility for Formation of Three-Electron Bonds along Peptide Chains. J Phys Chem B 2008; 112:14302-11. [DOI: 10.1021/jp805910x] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Xiaohua Chen
- The Center for Modeling and Simulation Chemistry, Institute of Theoretical Chemistry, Shandong University, Jinan 250100, People's Republic of China
| | - Liang Zhang
- The Center for Modeling and Simulation Chemistry, Institute of Theoretical Chemistry, Shandong University, Jinan 250100, People's Republic of China
| | - Zhiping Wang
- The Center for Modeling and Simulation Chemistry, Institute of Theoretical Chemistry, Shandong University, Jinan 250100, People's Republic of China
| | - Jilai Li
- The Center for Modeling and Simulation Chemistry, Institute of Theoretical Chemistry, Shandong University, Jinan 250100, People's Republic of China
| | - Wen Wang
- The Center for Modeling and Simulation Chemistry, Institute of Theoretical Chemistry, Shandong University, Jinan 250100, People's Republic of China
| | - Yuxiang Bu
- The Center for Modeling and Simulation Chemistry, Institute of Theoretical Chemistry, Shandong University, Jinan 250100, People's Republic of China
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5
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Bickelhaupt FM, Baerends EJ. Kohn-Sham Density Functional Theory: Predicting and Understanding Chemistry. REVIEWS IN COMPUTATIONAL CHEMISTRY 2007. [DOI: 10.1002/9780470125922.ch1] [Citation(s) in RCA: 424] [Impact Index Per Article: 24.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/05/2022]
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6
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Electron transfer reactions of tris(polypyridine)ruthenium(III) complexes with organic sulfides: importance of hydrophobic interaction. Tetrahedron 2005. [DOI: 10.1016/j.tet.2005.02.051] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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7
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Affiliation(s)
- Joseph E. King
- Department of Chemistry, 179 New Chemistry Building, Auburn University, Auburn, Alabama 36849-5312
| | - Andreas J. Illies
- Department of Chemistry, 179 New Chemistry Building, Auburn University, Auburn, Alabama 36849-5312
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Wakamiya A, Nishinaga T, Komatsu K. 1,2-dithiin annelated with bicyclo[2.2.2]octene frameworks. One-electron and two-electron oxidations and formation of a novel 2,3,5,6-tetrathiabicyclo[2.2.2]oct-7-ene radical cation with remarkable stability owing to a strong transannular interaction. J Am Chem Soc 2002; 124:15038-50. [PMID: 12475348 DOI: 10.1021/ja028297j] [Citation(s) in RCA: 40] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A stable derivative of 1,2-dithiin annelated with bicyclo[2.2.2]octene frameworks 4 was synthesized as red crystals by the reaction of a dilithiated dimer of bicyclo[2.2.2]octene with elemental sulfur in 59% yield. The cyclic voltammetry of 4 in CH(2)Cl(2) at -78 degrees C showed two reversible oxidation waves at E(1/2) +0.18 V and +0.72 V versus Fc/Fc(+), indicating that the radical cation and dication of 4 are stable under these conditions. Upon chemical one-electron oxidation of 4 in a rather low concentration (4.0 x 10(-4) M) with a 1.5 equiv of SbCl(5) in CH(2)Cl(2), a radical cation 4.+ was formed, whose spin distribution was determined by ESR spectroscopy and by the results of theoretical calculations (UB3LYP/6-31G). The electronic absorption spectrum of 4.+ in CH(2)Cl(2) exhibited a maximum absorption at 428 nm (epsilon = 2.3 x 10(3)), which was hypsochromically shifted from that of neutral 4 (469 nm). When the radical cation 4.+ was produced in higher concentration (0.06 M) in CH(2)Cl(2), a disproportionation was found to take place to give a SbCl(6)(-) salt of remarkably stable radical cation 5.+ having a novel 2,3,5,6-tetrathiabicyclo[2.2.2]oct-7-ene structure. In the X-ray structure of 5.+SbCl(6)(-), the transannular distance (2.794(3) A) between the sulfur atoms was found to be less than the sum of the van der Waals radii of a sulfur atom (3.70 A), suggesting the existence of a bonding interaction between the two disulfide linkages. The theoretical calculations (UB3LYP/6-31G) suggested that this transannular interaction could be described as the resonance between the limiting structures, each of them having a two-center three-electron bond between two sulfur atoms belonging to two different disulfide linkages: thus, both the spin and positive charge are equally delocalized to the four sulfur atoms, causing a great stabilization of 5.+. On the other hand, the 1,2-dithiin radical cation 4.+ was found to readily react with triplet oxygen with subsequent rearrangement to give the 1,2-dithiolium derivative 6+ having a carboxyl group. Finally, the reaction of 4 with an excess amount of SbF(5) gave the corresponding dication 4(2+), which was found to be a 6pi aromatic system on the basis of the results of NMR measurement and theoretical calculations.
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Affiliation(s)
- Atsushi Wakamiya
- Institute for Chemical Research, Kyoto University, Uji, Kyoto 611-0011, Japan
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9
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King JE, Illies AJ. Experimental Investigation of Gas Phase Ions of the Form [c-CnH2nS∴ICH3]+ where n = 2, 3, 4, and 5. Metastable and Collision-Induced Dissociation Results. J Phys Chem A 2002. [DOI: 10.1021/jp0218342] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Joseph E. King
- Department of Chemistry, 179 New Chemistry Building, Auburn University, Auburn, Alabama 36849-5312
| | - Andreas J. Illies
- Department of Chemistry, 179 New Chemistry Building, Auburn University, Auburn, Alabama 36849-5312
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Li YL, Wang D, Phillips DL. Time-resolved resonance Raman spectroscopy and density functional theory investigation of the CH2I–I isomer and CH2I2⋯I molecular complex products produced from ultraviolet photolysis of CH2I2 in the solution phase: Comparison of the structure and chemical reactivity of polyhalomethane isomers and polyhalomethane–halogen atom molecular complexes. J Chem Phys 2002. [DOI: 10.1063/1.1511724] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
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11
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Maity DK. Structure, bonding, and spectra of cyclic dithia radical cations: a theoretical study. J Am Chem Soc 2002; 124:8321-8. [PMID: 12105913 DOI: 10.1021/ja0261067] [Citation(s) in RCA: 47] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Ab initio molecular orbital and hybrid density functional theory methods are employed to characterize the structure, bonding and properties of several cyclic dithia radical cation systems, particularly in the context of intra molecular two-center three-electron (2c-3e) bonding between two sulfur atoms. The calculated results are able to interpret the time-resolved transient optical spectra obtained from pulse radiolysis technique for these positively charged dithia systems in aqueous solution. Visualization of the appropriate molecular orbital (MO) in the systems is able to depict the presence of a 2c-3e bond between two sulfur atoms and its sigma character. Geometry optimizations of these doublet systems are carried out at restricted open shell Becke's half-and-half (BHH) nonlocal exchange and Lee-Yang-Parr (LYP) nonlocal correlation functionals (BHHLYP) with 6-311+G(d,p) basis set including solvent effects adopting Onsager's reaction field model. Hessian calculations are done at the same level to check the nature of the equilibrium geometry. Energy data are further improved by performing MP2/6-311+G(d,p) calculations on these radical cation systems. Excited-state calculations are done following configuration interaction with single-electron excitation (CIS) method and the optical transition wavelength from the highest doubly occupied molecular orbital (HDOMO) to the lowest singly occupied molecular orbital (LSOMO) is seen to correspond and match to the position of the absorption maxima (lambda(max)) obtained from the experimental spectra for all these radical cation systems in aqueous solution. These calculations are able to resolve a long-standing ambiguity in the assignment of intra molecular 2c-3e bonding in the case of the 3-methyl-2,4-dithiapentane radical cation system and to provide new insights into bonding features of this odd electron system as well as of other cyclic dithia systems studied.
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Affiliation(s)
- Dilip K Maity
- Radiation Chemistry and Chemical Dynamics Division, Bhabha Atomic Research Centre, Mumbai - 400 085, India.
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12
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Affiliation(s)
- Dilip K. Maity
- Radiation Chemistry & Chemical Dynamics Division, Bhabha Atomic Research Centre, Mumbai 400 085, India
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13
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te Velde G, Bickelhaupt FM, Baerends EJ, Fonseca Guerra C, van Gisbergen SJA, Snijders JG, Ziegler T. Chemistry with ADF. J Comput Chem 2001. [DOI: 10.1002/jcc.1056] [Citation(s) in RCA: 7830] [Impact Index Per Article: 340.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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14
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Asmus KD. Heteroatom-centered free radicals some selected contributions by radiation chemistry. ACTA ACUST UNITED AC 2001. [DOI: 10.1016/s0167-6881(01)80016-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/07/2023]
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15
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Kishore K, Anklam E, Aced A, Asmus KD. Formation of Intramolecular Three-Electron-Bonded 2σ/1σ* Radical Cations upon Reduction of Dialkylsulfinyl Sulfides by H-Atoms. J Phys Chem A 2000. [DOI: 10.1021/jp0018706] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Kamal Kishore
- Applied Chemistry Division, Bhabha Atomic Research Centre, Mumbai 400 085, India; Commission for European Communities, Joint Research Centre Ispra, Environment Institute, I-21020 Ispra, Italy; Iris Technologies L.L.C., 3008 Oxford Rd., Lawrence, Kansas 66049; and Radiation Laboratory and Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556
| | - Elke Anklam
- Applied Chemistry Division, Bhabha Atomic Research Centre, Mumbai 400 085, India; Commission for European Communities, Joint Research Centre Ispra, Environment Institute, I-21020 Ispra, Italy; Iris Technologies L.L.C., 3008 Oxford Rd., Lawrence, Kansas 66049; and Radiation Laboratory and Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556
| | - Ahmed Aced
- Applied Chemistry Division, Bhabha Atomic Research Centre, Mumbai 400 085, India; Commission for European Communities, Joint Research Centre Ispra, Environment Institute, I-21020 Ispra, Italy; Iris Technologies L.L.C., 3008 Oxford Rd., Lawrence, Kansas 66049; and Radiation Laboratory and Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556
| | - Klaus-Dieter Asmus
- Applied Chemistry Division, Bhabha Atomic Research Centre, Mumbai 400 085, India; Commission for European Communities, Joint Research Centre Ispra, Environment Institute, I-21020 Ispra, Italy; Iris Technologies L.L.C., 3008 Oxford Rd., Lawrence, Kansas 66049; and Radiation Laboratory and Department of Chemistry and Biochemistry, University of Notre Dame, Notre Dame, Indiana 46556
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16
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Humbel S, Hoffmann N, Côte I, Bouquant J. Substituent Effects on Two-Center Three-Electron Bonds and Hydrogen Bonds Involving Unsaturated Organic Functional Groups and an Ammonia Radical Cation-The Resonance Contribution. Chemistry 2000. [DOI: 10.1002/(sici)1521-3765(20000502)6:9<1592::aid-chem1592>3.0.co;2-w] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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17
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18
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One-electron and three-electron chemical bonding, and increased-valence structures. ACTA ACUST UNITED AC 1999. [DOI: 10.1016/s1380-7323(99)80018-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/07/2023]
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19
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Yokoi H, Hatta A, Ishiguro K, Sawaki Y. Formation of σ- and π-Type Dimer Radical Cations by the Photochemical One-Electron Oxidation of Aromatic Sulfides. J Am Chem Soc 1998. [DOI: 10.1021/ja982595s] [Citation(s) in RCA: 50] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Hajime Yokoi
- Contribution from the Department of Applied Chemistry, Graduate School of Engineering, Nagoya University, Chikusa-ku, Nagoya 464-8603, Japan
| | - Akio Hatta
- Contribution from the Department of Applied Chemistry, Graduate School of Engineering, Nagoya University, Chikusa-ku, Nagoya 464-8603, Japan
| | - Katsuya Ishiguro
- Contribution from the Department of Applied Chemistry, Graduate School of Engineering, Nagoya University, Chikusa-ku, Nagoya 464-8603, Japan
| | - Yasuhiko Sawaki
- Contribution from the Department of Applied Chemistry, Graduate School of Engineering, Nagoya University, Chikusa-ku, Nagoya 464-8603, Japan
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Illies AJ. An Experimental Study of the Gas-Phase Bond Energies and Structures of [c-C4H8S∴c-SC4H8]+, [c-C5H10S∴c-SC4H8]+, and [c-C5H10S∴c-SC5H10]+ and of Reactions of [c-C4H8S]+ and [c-C5H10S]+. J Phys Chem A 1998. [DOI: 10.1021/jp982197b] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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21
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Bickelhaupt FM, Diefenbach A, de Visser SP, de Koning LJ, Nibbering NMM. Nature of the Three-Electron Bond in H2S∴SH2+. J Phys Chem A 1998. [DOI: 10.1021/jp9820830] [Citation(s) in RCA: 97] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- F. Matthias Bickelhaupt
- Fachbereich Chemie, Philipps-Universität Marburg, Hans-Meerwein-Strasse, D-35032 Marburg, Germany, and Instituut voor Massaspectrometrie, Universiteit van Amsterdam, Nieuwe Achtergracht 129, NL-1018 WS Amsterdam, The Netherlands
| | - Axel Diefenbach
- Fachbereich Chemie, Philipps-Universität Marburg, Hans-Meerwein-Strasse, D-35032 Marburg, Germany, and Instituut voor Massaspectrometrie, Universiteit van Amsterdam, Nieuwe Achtergracht 129, NL-1018 WS Amsterdam, The Netherlands
| | - Sam P. de Visser
- Fachbereich Chemie, Philipps-Universität Marburg, Hans-Meerwein-Strasse, D-35032 Marburg, Germany, and Instituut voor Massaspectrometrie, Universiteit van Amsterdam, Nieuwe Achtergracht 129, NL-1018 WS Amsterdam, The Netherlands
| | - Leo J. de Koning
- Fachbereich Chemie, Philipps-Universität Marburg, Hans-Meerwein-Strasse, D-35032 Marburg, Germany, and Instituut voor Massaspectrometrie, Universiteit van Amsterdam, Nieuwe Achtergracht 129, NL-1018 WS Amsterdam, The Netherlands
| | - Nico M. M. Nibbering
- Fachbereich Chemie, Philipps-Universität Marburg, Hans-Meerwein-Strasse, D-35032 Marburg, Germany, and Instituut voor Massaspectrometrie, Universiteit van Amsterdam, Nieuwe Achtergracht 129, NL-1018 WS Amsterdam, The Netherlands
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Nichols LS, McKee ML, Illies AJ. An Experimental and Theoretical Investigation of Ion−Molecule Reactions Involving Methyl Halide Radical Cations with Methyl Halides. J Am Chem Soc 1998. [DOI: 10.1021/ja973644o] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Linda S. Nichols
- Contribution from the Department of Chemistry, Auburn University, Auburn, Alabama 36849-5312
| | - Michael L. McKee
- Contribution from the Department of Chemistry, Auburn University, Auburn, Alabama 36849-5312
| | - Andreas J. Illies
- Contribution from the Department of Chemistry, Auburn University, Auburn, Alabama 36849-5312
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23
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Strong hydrogen bonding in the gas phase: fluoromethane⋯hydronium versus fluoromethane⋯ammonium. ACTA ACUST UNITED AC 1997. [DOI: 10.1016/s0168-1176(97)00067-0] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Kobayashi K, Obinata T, Furukawa N. Remote Oxygen Migration Reaction between Sulfur Atoms in 1,4-Bis(methylthio)benzene Derivatives: Possible Formation of Bis(dithia dication) Dimer as an Intermediate. CHEM LETT 1997. [DOI: 10.1246/cl.1997.1175] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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25
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Harcourt RD. Valence Bond and Molecular Orbital Descriptions of the Three-Electron Bond. J Phys Chem A 1997. [DOI: 10.1021/jp963358j] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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