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For: Cao Z, Magar R, Wang Y, Barati Farimani A. MOFormer: Self-Supervised Transformer Model for Metal-Organic Framework Property Prediction. J Am Chem Soc 2023;145:2958-2967. [PMID: 36706365 PMCID: PMC10041520 DOI: 10.1021/jacs.2c11420] [Citation(s) in RCA: 20] [Impact Index Per Article: 20.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Number Cited by Other Article(s)
1
Terrones GG, Huang SP, Rivera MP, Yue S, Hernandez A, Kulik HJ. Metal-Organic Framework Stability in Water and Harsh Environments from Data-Driven Models Trained on the Diverse WS24 Data Set. J Am Chem Soc 2024. [PMID: 38984798 DOI: 10.1021/jacs.4c05879] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 07/11/2024]
2
Bai X, Xie Y, Zhang X, Han H, Li JR. Evaluation of Open-Source Large Language Models for Metal-Organic Frameworks Research. J Chem Inf Model 2024;64:4958-4965. [PMID: 38529913 DOI: 10.1021/acs.jcim.4c00065] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/27/2024]
3
Yue Y, Mohamed SA, Jiang J. Classifying and Predicting the Thermal Expansion Properties of Metal-Organic Frameworks: A Data-Driven Approach. J Chem Inf Model 2024;64:4966-4979. [PMID: 38920337 DOI: 10.1021/acs.jcim.4c00057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/27/2024]
4
Zhao G, Chung YG. PACMAN: A Robust Partial Atomic Charge Predicter for Nanoporous Materials Based on Crystal Graph Convolution Networks. J Chem Theory Comput 2024;20:5368-5380. [PMID: 38822793 DOI: 10.1021/acs.jctc.4c00434] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/03/2024]
5
Luong KD, Singh A. Application of Transformers in Cheminformatics. J Chem Inf Model 2024;64:4392-4409. [PMID: 38815246 PMCID: PMC11167597 DOI: 10.1021/acs.jcim.3c02070] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2023] [Revised: 04/05/2024] [Accepted: 05/06/2024] [Indexed: 06/01/2024]
6
Hardiagon A, Coudert FX. Multiscale Modeling of Physical Properties of Nanoporous Frameworks: Predicting Mechanical, Thermal, and Adsorption Behavior. Acc Chem Res 2024;57:1620-1632. [PMID: 38752454 DOI: 10.1021/acs.accounts.4c00161] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/18/2024]
7
Balasingham J, Zamaraev V, Kurlin V. Accelerating material property prediction using generically complete isometry invariants. Sci Rep 2024;14:10132. [PMID: 38698128 PMCID: PMC11065885 DOI: 10.1038/s41598-024-59938-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2024] [Accepted: 04/16/2024] [Indexed: 05/05/2024]  Open
8
Cao Z, Sciabola S, Wang Y. Large-Scale Pretraining Improves Sample Efficiency of Active Learning-Based Virtual Screening. J Chem Inf Model 2024;64:1882-1891. [PMID: 38442000 DOI: 10.1021/acs.jcim.3c01938] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/07/2024]
9
Korolev V, Mitrofanov A. Coarse-Grained Crystal Graph Neural Networks for Reticular Materials Design. J Chem Inf Model 2024;64:1919-1931. [PMID: 38456446 DOI: 10.1021/acs.jcim.3c02083] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/09/2024]
10
Cao Z, Barati Farimani O, Ock J, Barati Farimani A. Machine Learning in Membrane Design: From Property Prediction to AI-Guided Optimization. NANO LETTERS 2024;24:2953-2960. [PMID: 38436240 PMCID: PMC10941251 DOI: 10.1021/acs.nanolett.3c05137] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/29/2023] [Revised: 02/26/2024] [Accepted: 02/27/2024] [Indexed: 03/05/2024]
11
Jose A, Devijver E, Jakse N, Poloni R. Informative Training Data for Efficient Property Prediction in Metal-Organic Frameworks by Active Learning. J Am Chem Soc 2024;146:6134-6144. [PMID: 38404041 DOI: 10.1021/jacs.3c13687] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/27/2024]
12
Fu N, Wei L, Hu J. Physics-Guided Dual Self-Supervised Learning for Structure-Based Material Property Prediction. J Phys Chem Lett 2024:2841-2850. [PMID: 38442260 DOI: 10.1021/acs.jpclett.4c00100] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/07/2024]
13
Wang J, Liu J, Wang H, Zhou M, Ke G, Zhang L, Wu J, Gao Z, Lu D. A comprehensive transformer-based approach for high-accuracy gas adsorption predictions in metal-organic frameworks. Nat Commun 2024;15:1904. [PMID: 38429314 PMCID: PMC10907743 DOI: 10.1038/s41467-024-46276-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2023] [Accepted: 02/20/2024] [Indexed: 03/03/2024]  Open
14
Huang H, Magar R, Barati Farimani A. Pretraining Strategies for Structure Agnostic Material Property Prediction. J Chem Inf Model 2024;64:627-637. [PMID: 38301621 PMCID: PMC10865364 DOI: 10.1021/acs.jcim.3c00919] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2023] [Revised: 01/11/2024] [Accepted: 01/12/2024] [Indexed: 02/03/2024]
15
Sarikas AP, Gkagkas K, Froudakis GE. Gas adsorption meets deep learning: voxelizing the potential energy surface of metal-organic frameworks. Sci Rep 2024;14:2242. [PMID: 38278851 PMCID: PMC10817925 DOI: 10.1038/s41598-023-50309-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2023] [Accepted: 12/17/2023] [Indexed: 01/28/2024]  Open
16
Qiu H, Liu L, Qiu X, Dai X, Ji X, Sun ZY. PolyNC: a natural and chemical language model for the prediction of unified polymer properties. Chem Sci 2024;15:534-544. [PMID: 38179518 PMCID: PMC10763023 DOI: 10.1039/d3sc05079c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Accepted: 12/04/2023] [Indexed: 01/06/2024]  Open
17
Li W, Situ Y, Ding L, Chen Y, Yang Q. MOF-GRU: A MOFid-Aided Deep Learning Model for Predicting the Gas Separation Performance of Metal-Organic Frameworks. ACS APPLIED MATERIALS & INTERFACES 2023;15:59887-59894. [PMID: 38087435 DOI: 10.1021/acsami.3c11790] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/28/2023]
18
Tang H, Duan L, Jiang J. Leveraging Machine Learning for Metal-Organic Frameworks: A Perspective. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2023;39:15849-15863. [PMID: 37922472 DOI: 10.1021/acs.langmuir.3c01964] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/05/2023]
19
Zhao Y, Zhao Y, Gong Q, Wang Z. Graph Transformer with Convolution Parallel Networks for Predicting Single and Binary Component Adsorption Performance of Metal-Organic Frameworks. ACS APPLIED MATERIALS & INTERFACES 2023;15:49527-49537. [PMID: 37831093 DOI: 10.1021/acsami.3c10951] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/14/2023]
20
Wang Y, Xu C, Li Z, Barati Farimani A. Denoise Pretraining on Nonequilibrium Molecules for Accurate and Transferable Neural Potentials. J Chem Theory Comput 2023;19:5077-5087. [PMID: 37390120 PMCID: PMC10413865 DOI: 10.1021/acs.jctc.3c00289] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2023] [Indexed: 07/02/2023]
21
Zhang Z, Zhang C, Zhang Y, Deng S, Yang YF, Su A, She YB. Predicting band gaps of MOFs on small data by deep transfer learning with data augmentation strategies. RSC Adv 2023;13:16952-16962. [PMID: 37288371 PMCID: PMC10243186 DOI: 10.1039/d3ra02142d] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2023] [Accepted: 05/31/2023] [Indexed: 06/09/2023]  Open
22
Demir H, Daglar H, Gulbalkan HC, Aksu GO, Keskin S. Recent advances in computational modeling of MOFs: From molecular simulations to machine learning. Coord Chem Rev 2023. [DOI: 10.1016/j.ccr.2023.215112] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/03/2023]
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