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Kuji K, Kawamoto M, Enomoto M, Kuwahara S, Meguro Y. Enantioselective synthesis of the aglycone of burnettramic acid A. Biosci Biotechnol Biochem 2023; 87:1442-1452. [PMID: 37682523 DOI: 10.1093/bbb/zbad129] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2023] [Accepted: 09/01/2023] [Indexed: 09/09/2023]
Abstract
Enantioselective total synthesis of the aglycone of burnettramic acid A, an antifungal pyrrolizidinedione with a terminally mannosylated long acyl chain produced by Aspergillus fungi, has been achieved from a known carboxylic acid by a 14-step sequence. The key steps include 2 types of asymmetric alkylation, coupling of an acetylide intermediate with (S)-epichlorohydrin to provide an acetylenic epoxide in 1 pot, and the Birch reduction to effect desulfonylation, semi-reduction of triple bond, and debenzylation in a concurrent manner. Good agreement of the synthetic aglycone with naturally occurring one in 1H and 13C nuclear magnetic resonance (NMR) spectra, coupled with previously reported unambiguous stereochemical assignment of the sugar moiety, has confirmed the structure of burnettramic acid A.
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Affiliation(s)
- Kohei Kuji
- Laboratory of Applied Bioorganic Chemistry, Graduate School of Agricultural Science, Tohoku University, Sendai, Japan
| | - Misaki Kawamoto
- Laboratory of Applied Bioorganic Chemistry, Graduate School of Agricultural Science, Tohoku University, Sendai, Japan
| | - Masaru Enomoto
- Laboratory of Applied Bioorganic Chemistry, Graduate School of Agricultural Science, Tohoku University, Sendai, Japan
| | - Shigefumi Kuwahara
- Laboratory of Applied Bioorganic Chemistry, Graduate School of Agricultural Science, Tohoku University, Sendai, Japan
| | - Yasuhiro Meguro
- Laboratory of Applied Bioorganic Chemistry, Graduate School of Agricultural Science, Tohoku University, Sendai, Japan
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2
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Hans AC, Becker PM, Haußmann J, Suhr S, Wanner DM, Lederer V, Willig F, Frey W, Sarkar B, Kästner J, Peters R. A Practical and Robust Zwitterionic Cooperative Lewis Acid/Acetate/Benzimidazolium Catalyst for Direct 1,4-Additions. Angew Chem Int Ed Engl 2023; 62:e202217519. [PMID: 36651714 DOI: 10.1002/anie.202217519] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2022] [Revised: 01/17/2023] [Accepted: 01/18/2023] [Indexed: 01/19/2023]
Abstract
A catalyst type is disclosed allowing for exceptional efficiency in direct 1,4-additions. The catalyst is a zwitterionic entity, in which acetate binds to CuII , which is formally negatively charged and serving as counterion for benzimidazolium. All 3 functionalities are involved in the catalytic activation. For maleimides productivity was increased by a factor >300 compared to literature (TONs up to 6700). High stereoselectivity and productivity was attained for a broad range of other Michael acceptors as well. The polyfunctional catalyst is accessible in only 4 steps from N-Ph-benzimidazole with an overall yield of 96 % and robust during catalysis. This allowed to reuse the same catalyst multiple times with nearly constant efficiency. Mechanistic studies, in particular by DFT, give a detailed picture how the catalyst operates. The benzimidazolium unit stabilizes the coordinated enolate nucleophile and prevents that acetate/acetic acid dissociate from the catalyst.
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Affiliation(s)
- Andreas C Hans
- Universität Stuttgart, Institut für Organische Chemie, Pfaffenwaldring 55, 70569, Stuttgart, Germany
| | - Patrick M Becker
- Universität Stuttgart, Institut für Theoretische Chemie, Pfaffenwaldring 55, 70569, Stuttgart, Germany
| | - Johanna Haußmann
- Universität Stuttgart, Institut für Organische Chemie, Pfaffenwaldring 55, 70569, Stuttgart, Germany
| | - Simon Suhr
- Universität Stuttgart, Institut für Anorganische Chemie, Pfaffenwaldring 55, 70569, Stuttgart, Germany
| | - Daniel M Wanner
- Universität Stuttgart, Institut für Organische Chemie, Pfaffenwaldring 55, 70569, Stuttgart, Germany
| | - Vera Lederer
- Universität Stuttgart, Institut für Organische Chemie, Pfaffenwaldring 55, 70569, Stuttgart, Germany
| | - Felix Willig
- Universität Stuttgart, Institut für Organische Chemie, Pfaffenwaldring 55, 70569, Stuttgart, Germany
| | - Wolfgang Frey
- Universität Stuttgart, Institut für Organische Chemie, Pfaffenwaldring 55, 70569, Stuttgart, Germany
| | - Biprajit Sarkar
- Universität Stuttgart, Institut für Anorganische Chemie, Pfaffenwaldring 55, 70569, Stuttgart, Germany
| | - Johannes Kästner
- Universität Stuttgart, Institut für Theoretische Chemie, Pfaffenwaldring 55, 70569, Stuttgart, Germany
| | - René Peters
- Universität Stuttgart, Institut für Organische Chemie, Pfaffenwaldring 55, 70569, Stuttgart, Germany
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3
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Landeros JM, Cruz‐Hernández C, Juaristi E. α‐Amino Acids and α,β‐Dipeptides Intercalated into Hydrotalcite: Efficient Catalysts in the Asymmetric Michael Addition Reaction of Aldehydes to
N
‐Substituted Maleimides. European J Org Chem 2021. [DOI: 10.1002/ejoc.202100877] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- José M. Landeros
- Departamento de Química, Centro de Investigación y de Estudios Avanzados Instituto Politécnico Nacional Avenida IPN #2508 07360 Ciudad de México Mexico
| | - Carlos Cruz‐Hernández
- Departamento de Química, Centro de Investigación y de Estudios Avanzados Instituto Politécnico Nacional Avenida IPN #2508 07360 Ciudad de México Mexico
| | - Eusebio Juaristi
- Departamento de Química, Centro de Investigación y de Estudios Avanzados Instituto Politécnico Nacional Avenida IPN #2508 07360 Ciudad de México Mexico
- El Colegio Nacional Luis González Obregón 23, Centro Histórico 06020 Ciudad de México Mexico
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Pak BS, Supantanapong N, Vanderwal CD. The Recurring Roles of Chlorine in Synthetic and Biological Studies of the Lissoclimides. Acc Chem Res 2021; 54:1131-1142. [PMID: 33544578 DOI: 10.1021/acs.accounts.0c00866] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Halogenated natural products number in the thousands, but only in rare cases are the evolutionary advantages conferred by the halogens understood. We set out to investigate the lissoclimide family of cytotoxins, which includes several chlorinated members, because of our long-standing interest in the synthesis of chlorinated secondary metabolites.Our initial success in this endeavor was a semisynthesis of chlorolissoclimide (CL) from the commercially available sesquiterpenoid sclareolide. Featuring a highly selective and efficient-and plausibly biomimetic-C-H chlorination, we were able to access enough CL for collaborative studies, including X-ray cocrystallography with the eukaryotic ribosome. Through this experiment, we learned that CL's chlorine atom engages in a novel halogen-π dispersion interaction with a neighboring nucleobase in the ribosome E-site.Owing to the limitations of our semisynthesis approach, we established an analogue-oriented approach to access numerous lissoclimide compounds to both improve our understanding of structure-activity relationships and to learn more about the halogen-π interaction. In the course of these studies, we made over a dozen lissoclimide-like compounds, the most interesting of which contained chlorine-bearing carbons with unnatural configurations. Rationalizing the retained potency of these compounds that appeared to be a poor fit for the lissoclimide binding pocket, we came to realize that the chlorine atoms would engage in these same halogen-π interactions even at the expense of a chair to twist-boat conformational change, which also permitted the compounds to fit in the binding site.Finally, because neither of the first two approaches could easily access the most potent natural lissoclimides, we designed a synthesis that took advantage of rarely used terminal epoxides to initiate polyene cyclizations. In this case, the chlorine atom was incorporated early and helped control the stereochemical outcome of the key step.Over the course of this project, three different synthesis approaches were designed and executed, and our ability to access numerous lissoclimides fueled a range of collaborative biological studies. Further, chlorine played impactful roles throughout various aspects of both synthesis and biology. We remain inspired to learn more about the mechanism of action of these compounds and to deeply investigate the potentially valuable halogen-π dispersion interaction in the context of small molecule/nucleic acid binding. In that context, our work offers an instance wherein we might have gained a rudimentary understanding of the evolutionary importance of the halogen in a halogenated natural product.
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Affiliation(s)
- Bonnie S. Pak
- Department of Chemistry, UC Irvine, 1102 Natural Sciences II, Irvine, California 92697-2025, United States
| | - Nantamon Supantanapong
- Department of Chemistry, UC Irvine, 1102 Natural Sciences II, Irvine, California 92697-2025, United States
| | - Christopher D. Vanderwal
- Department of Chemistry, UC Irvine, 1102 Natural Sciences II, Irvine, California 92697-2025, United States
- Department of Pharmaceutical Sciences, UC Irvine, 101 Theory, Suite 101, Irvine, California 92697-3958, United States
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5
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Vrubliauskas D, Gross BM, Vanderwal CD. Stereocontrolled Radical Bicyclizations of Oxygenated Precursors Enable Short Syntheses of Oxidized Abietane Diterpenoids. J Am Chem Soc 2021; 143:2944-2952. [PMID: 33555176 DOI: 10.1021/jacs.0c13300] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
The power of cation-initiated cyclizations of polyenes for the synthesis of polycyclic terpenoids cannot be overstated. However, a major limitation is the intolerance of many relevant reaction conditions toward the inclusion in the substrate of polar functionality, particularly in unprotected form. Radical polycyclizations are important alternatives to bioinspired cationic variants, in part owing to the range of possible initiation strategies, and in part for the functional group tolerance of radical reactions. In this article, we demonstrate that Co-catalyzed MHAT-initiated radical bicyclizations are not only tolerant of oxidation at virtually every position in the substrate, oftentimes in unprotected form, but these functional groups can also contribute to high levels of stereochemical control in these complexity-generating transformations. Specifically, we show the effects of protected or unprotected hydroxy groups at six different positions and their impact on stereoselectivity. Further, we show how multiply oxidized substrates perform in these reactions, and finally, we document the utility of these reactions in the synthesis of three aromatic abietane diterpenoids.
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Affiliation(s)
- Darius Vrubliauskas
- 1102 Natural Sciences II, Department of Chemistry, University of California, Irvine, California 92697-2025, United States
| | - Benjamin M Gross
- 1102 Natural Sciences II, Department of Chemistry, University of California, Irvine, California 92697-2025, United States
| | - Christopher D Vanderwal
- 1102 Natural Sciences II, Department of Chemistry, University of California, Irvine, California 92697-2025, United States
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6
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Carroll AR, Copp BR, Davis RA, Keyzers RA, Prinsep MR. Marine natural products. Nat Prod Rep 2021; 38:362-413. [PMID: 33570537 DOI: 10.1039/d0np00089b] [Citation(s) in RCA: 198] [Impact Index Per Article: 66.0] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
This review covers the literature published in 2019 for marine natural products (MNPs), with 719 citations (701 for the period January to December 2019) referring to compounds isolated from marine microorganisms and phytoplankton, green, brown and red algae, sponges, cnidarians, bryozoans, molluscs, tunicates, echinoderms, mangroves and other intertidal plants and microorganisms. The emphasis is on new compounds (1490 in 440 papers for 2019), together with the relevant biological activities, source organisms and country of origin. Pertinent reviews, biosynthetic studies, first syntheses, and syntheses that led to the revision of structures or stereochemistries, have been included. Methods used to study marine fungi and their chemical diversity have also been discussed.
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Affiliation(s)
- Anthony R Carroll
- School of Environment and Science, Griffith University, Gold Coast, Australia. and Griffith Institute for Drug Discovery, Griffith University, Brisbane, Australia
| | - Brent R Copp
- School of Chemical Sciences, University of Auckland, Auckland, New Zealand
| | - Rohan A Davis
- Griffith Institute for Drug Discovery, Griffith University, Brisbane, Australia and School of Enivironment and Science, Griffith University, Brisbane, Australia
| | - Robert A Keyzers
- Centre for Biodiscovery, School of Chemical and Physical Sciences, Victoria University of Wellington, Wellington, New Zealand
| | - Michèle R Prinsep
- Chemistry, School of Science, University of Waikato, Hamilton, New Zealand
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7
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Vojáčková P, Michalska L, Nečas M, Shcherbakov D, Böttger EC, Šponer J, Šponer JE, Švenda J. Stereocontrolled Synthesis of (−)-Bactobolin A. J Am Chem Soc 2020; 142:7306-7311. [DOI: 10.1021/jacs.0c01554] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Petra Vojáčková
- Department of Chemistry, Masaryk University, Brno 625 00, Czech Republic
- International Clinical Research Center, St. Anne’s University Hospital, Brno 656 91, Czech Republic
| | - Lucyna Michalska
- Department of Chemistry, Masaryk University, Brno 625 00, Czech Republic
- International Clinical Research Center, St. Anne’s University Hospital, Brno 656 91, Czech Republic
| | - Marek Nečas
- Department of Chemistry, Masaryk University, Brno 625 00, Czech Republic
| | - Dimitri Shcherbakov
- Institute of Medical Microbiology, University of Zürich, Zürich 8006, Switzerland
| | - Erik C. Böttger
- Institute of Medical Microbiology, University of Zürich, Zürich 8006, Switzerland
| | - Jiří Šponer
- Institute of Biophysics, Czech Academy of Sciences, Brno 612 65, Czech Republic
| | - Judit E. Šponer
- Institute of Biophysics, Czech Academy of Sciences, Brno 612 65, Czech Republic
| | - Jakub Švenda
- Department of Chemistry, Masaryk University, Brno 625 00, Czech Republic
- International Clinical Research Center, St. Anne’s University Hospital, Brno 656 91, Czech Republic
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Vrubliauskas D, Vanderwal CD. Cobalt-Catalyzed Hydrogen-Atom Transfer Induces Bicyclizations that Tolerate Electron-Rich and Electron-Deficient Intermediate Alkenes. Angew Chem Int Ed Engl 2020; 59:6115-6121. [PMID: 31991035 PMCID: PMC7124983 DOI: 10.1002/anie.202000252] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2020] [Indexed: 12/12/2022]
Abstract
A novel CoII -catalyzed polyene cyclization was developed that is uniquely effective when performed in hexafluoroisopropanol as the solvent. The process is presumably initiated by metal-catalyzed hydrogen-atom transfer (MHAT) to 1,1-disubstituted or monosubstituted alkenes, and the reaction is remarkable for its tolerance of internal alkenes bearing either electron-rich methyl or electron-deficient nitrile substituents. Electron-rich aromatic terminators are required in both cases. Terpenoid scaffolds with different substitution patterns are obtained with excellent diastereoselectivities, and the bioactive C20-oxidized abietane diterpenoid carnosaldehyde was made to showcase the utility of the nitrile-bearing products. Also provided are the results of several mechanistic experiments that suggest the process features an MHAT-induced radical bicyclization with late-stage oxidation to regenerate the aromatic terminator.
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Affiliation(s)
- Darius Vrubliauskas
- Department of Chemistry, University of California, Irvine, CA, 92697-2025, USA
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9
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Vrubliauskas D, Vanderwal CD. Cobalt‐Catalyzed Hydrogen‐Atom Transfer Induces Bicyclizations that Tolerate Electron‐Rich and Electron‐Deficient Intermediate Alkenes. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202000252] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
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10
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Hu J, Jia Z, Xu K, Ding H. Total Syntheses of (+)-Stemarin and the Proposed Structures of Stemara-13(14)-en-18-ol and Stemara-13(14)-en-17-acetoxy-18-ol. Org Lett 2020; 22:1426-1430. [DOI: 10.1021/acs.orglett.0c00029] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Jialei Hu
- Department of Chemistry, Zhejiang University, Hangzhou 310058, China
| | - Ziqi Jia
- Department of Chemistry, Zhejiang University, Hangzhou 310058, China
| | - Kaixiang Xu
- Department of Chemistry, Zhejiang University, Hangzhou 310058, China
| | - Hanfeng Ding
- Department of Chemistry, Zhejiang University, Hangzhou 310058, China
- Key Laboratory of Organosilicon Chemistry and Material Technology of Ministry of Education, Hangzhou Normal University, Hangzhou 311121, China
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11
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Harms V, Kirschning A, Dickschat JS. Nature-driven approaches to non-natural terpene analogues. Nat Prod Rep 2020; 37:1080-1097. [DOI: 10.1039/c9np00055k] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Abstract
The reactions catalysed by terpene synthases belong to the most complex and fascinating cascade-type transformations in Nature.
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Affiliation(s)
- Vanessa Harms
- Institute of Organic Chemistry and Center of Biomolecular Drug Research (BMWZ)
- Leibniz Universität Hannover
- 30167 Hannover
- Germany
| | - Andreas Kirschning
- Institute of Organic Chemistry and Center of Biomolecular Drug Research (BMWZ)
- Leibniz Universität Hannover
- 30167 Hannover
- Germany
| | - Jeroen S. Dickschat
- Kekulé-Institute of Organic Chemistry and Biochemistry
- University of Bonn
- 53121 Bonn
- Germany
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