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Pedersen CM, Su H. Ring-System-Based Conformational Switches and their Applications in Sensing and Liposomal Drug Delivery. SYNTHESIS-STUTTGART 2022. [DOI: 10.1055/s-0040-1720045] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
Abstract
AbstractIn the past decades, a great number of stimuli-responsive systems have been developed to be used as drug-delivery systems with high sensitivity and selectivity in targeted therapy. Despite promising results, the current stimuli-responsive systems suffer from the complexity of preparation, as most novel stimuli-responsive systems are based on polymers. Small molecules have often been neglected as candidates for application for stimuli-responsive systems. Recently, structures based on six-membered ring molecules or bicyclic molecules have been developed into conformational switches working through conformational interconversion. These single conformational switches have significantly reduced the complexity of material preparation compared to polymers or copolymers. In this review, we focus on ring-system-based conformational switches that are involved in sensors and smart drug-delivery systems. We hope that this review will shed light on ring-system-based single conformational switches for use in the development of stimuli-responsive systems.1 Introduction2 Conformation Switches Based On Bispidine Derivatives3 Conformation Switches Based On Cycloalkanes4 Conformation Switches Based On Carbohydrates5 Conclusion
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Affiliation(s)
| | - Hang Su
- Department of Chemistry, University of Copenhagen
- Practice Innovations Center, Changchun University of Chinese Medicine
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2
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Hood JC, Tshikaya Y, Manz AR, LaPorte MC, Klumpp DA. Double Addition Reactions Involving Vinyl-Substituted N-Heterocycles and Active Methylene Compounds. J Org Chem 2022; 87:4908-4911. [PMID: 35271287 DOI: 10.1021/acs.joc.1c02655] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Abstract
A series of conjugate addition reactions have been performed with vinyl-substituted N-heterocycles in acid-catalyzed conversions. Using active methylene compounds, double conjugate addition reactions have been accomplished to provide dipyridyl and related heterocyclic products. These conversions have utilized 1,3-dicarbonyl compounds, cyano esters, a cyano sulfone, and malonyl nitrile as nucleophiles. The Michael accepting groups include vinyl-substituted pyridines, quinoline, and pyrazine. Double conjugate addition reactions have also been accomplished with 2,6-divinylpyridine and related systems.
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Affiliation(s)
- Jacob C Hood
- Department of Chemistry and Biochemistry, Northern Illinois University, DeKalb, Illinois 60115, United States
| | - Yannick Tshikaya
- Department of Chemistry and Biochemistry, Northern Illinois University, DeKalb, Illinois 60115, United States
| | - Aaren R Manz
- Department of Chemistry and Biochemistry, Northern Illinois University, DeKalb, Illinois 60115, United States
| | - Marcus C LaPorte
- Department of Chemistry and Biochemistry, Northern Illinois University, DeKalb, Illinois 60115, United States
| | - Douglas A Klumpp
- Department of Chemistry and Biochemistry, Northern Illinois University, DeKalb, Illinois 60115, United States
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3
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Nonat AM, Roux A, Sy M, Charbonnière LJ. 2,4-Substituted bispidines as rigid hosts for versatile applications: from κ-opioid receptor to metal coordination. Dalton Trans 2019; 48:16476-16492. [DOI: 10.1039/c9dt03480c] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
Abstract
Bispidines and their applications in medicine, catalysis, magnetism and medical imaging: what do we know about the influence of substituents?
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Affiliation(s)
- Aline M. Nonat
- Equipe de Synthèse pour l'Analyse (SynPA)
- Institut Pluridisciplinaire Hubert Curien (IPHC
- UMR 7178)
- CNRS/Université de Strasbourg
- ECPM
| | - Amandine Roux
- Equipe de Synthèse pour l'Analyse (SynPA)
- Institut Pluridisciplinaire Hubert Curien (IPHC
- UMR 7178)
- CNRS/Université de Strasbourg
- ECPM
| | - Maryame Sy
- Equipe de Synthèse pour l'Analyse (SynPA)
- Institut Pluridisciplinaire Hubert Curien (IPHC
- UMR 7178)
- CNRS/Université de Strasbourg
- ECPM
| | - Loïc J. Charbonnière
- Equipe de Synthèse pour l'Analyse (SynPA)
- Institut Pluridisciplinaire Hubert Curien (IPHC
- UMR 7178)
- CNRS/Université de Strasbourg
- ECPM
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4
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Khrustaleva AN, Frolov KA, Dotsenko VV, Aksenov NA, Aksenova IV, Krivokolysko SG. Synthesis of new functionalized 3,7-diazabicyclo[3.3.1]nonanes by aminomethylation of the Guareschi imides. Tetrahedron Lett 2017. [DOI: 10.1016/j.tetlet.2017.10.069] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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5
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Aminomethylation of Guareschi imides: synthesis of 2,4-dioxo-1H,5H-3,7-spiro[diazabicyclo[3.3.1]nonane-9,4'-piperidine]-1,5-dicarbonitriles. Chem Heterocycl Compd (N Y) 2017. [DOI: 10.1007/s10593-017-2140-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Ming-Tatt L, Khalivulla SI, Akhtar MN, Lajis N, Perimal EK, Akira A, Ali DI, Sulaiman MR. Anti-hyperalgesic effect of a benzilidine-cyclohexanone analogue on a mouse model of chronic constriction injury-induced neuropathic pain: Participation of the κ-opioid receptor and KATP. Pharmacol Biochem Behav 2013; 114-115:58-63. [PMID: 24201054 DOI: 10.1016/j.pbb.2013.10.019] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/09/2013] [Revised: 10/16/2013] [Accepted: 10/23/2013] [Indexed: 01/09/2023]
Abstract
The present study investigated the analgesic effect of a novel synthetic cyclohexanone derivative, 2,6-bis-4-(hydroxyl-3-methoxybenzilidine)-cyclohexanone or BHMC in a mouse model of chronic constriction injury-induced neuropathic pain. It was demonstrated that intraperitoneal administration of BHMC (0.03, 0.1, 0.3 and 1.0mg/kg) exhibited dose-dependent inhibition of chronic constriction injury-induced neuropathic pain in mice, when evaluated using Randall-Selitto mechanical analgesiometer. It was also demonstrated that pretreatment of naloxone (non-selective opioid receptor blocker), nor-binaltorphimine (nor-BNI, selective κ-opioid receptor blocker), but not β-funaltrexamine (β-FN, selective μ-opioid receptor blocker) and naltrindole hydrochloride (NTI, selective δ-opioid receptor blocker), reversed the anti-nociceptive effect of BHMC. In addition, the analgesic effect of BHMC was also reverted by pretreatment of 1H-[1,2,4]Oxadiazole[4,3-a]quinoxalin-1-one (ODQ, soluble guanosyl cyclase blocker) and glibenclamide (ATP-sensitive potassium channel blocker) but not Nω-nitro-l-arginine (l-NAME, a nitric oxide synthase blocker). Taken together, the present study demonstrated that the systemic administration of BHMC attenuated chronic constriction, injury-induced neuropathic pain. We also suggested that the possible mechanisms include κ-opioid receptor activation and nitric oxide-independent cyclic guanosine monophosphate activation of ATP-sensitive potassium channel opening.
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Affiliation(s)
- Lee Ming-Tatt
- Faculty of Pharmaceutical Sciences, UCSI University, Cheras, Kuala Lumpur, Malaysia
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8
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Vlasova LI, Baibulatova NZ, Dokichev VA, Tomilov YV. The Mannich-type interaction of sulfur-containing CH acids with formaldehyde and primary amines. Russ Chem Bull 2013. [DOI: 10.1007/s11172-012-0298-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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9
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Comba P, Hunoldt S, Morgen M, Pietzsch J, Stephan H, Wadepohl H. Optimization of Pentadentate Bispidines as Bifunctional Chelators for 64Cu Positron Emission Tomography (PET). Inorg Chem 2013; 52:8131-43. [DOI: 10.1021/ic4008685] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Peter Comba
- Anorganisch-Chemisches Institut, Universität Heidelberg, INF 270, D-69120 Heidelberg, Germany
| | - Sebastian Hunoldt
- Institute of Radiopharmaceutical Cancer Research, Helmholtz-Zentrum Dresden-Rossendorf, D-01314 Dresden, Germany
| | - Michael Morgen
- Anorganisch-Chemisches Institut, Universität Heidelberg, INF 270, D-69120 Heidelberg, Germany
| | - Jens Pietzsch
- Institute of Radiopharmaceutical Cancer Research, Helmholtz-Zentrum Dresden-Rossendorf, D-01314 Dresden, Germany
- Department of Chemistry and Food Chemistry, University of Technology Dresden, D-01062 Dresden, Germany
| | - Holger Stephan
- Institute of Radiopharmaceutical Cancer Research, Helmholtz-Zentrum Dresden-Rossendorf, D-01314 Dresden, Germany
| | - Hubert Wadepohl
- Anorganisch-Chemisches Institut, Universität Heidelberg, INF 270, D-69120 Heidelberg, Germany
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Norrehed S, Erdélyi M, Light ME, Gogoll A. Protonation-triggered conformational modulation of an N,N′-dialkylbispidine: first observation of the elusive boat–boat conformer. Org Biomol Chem 2013; 11:6292-9. [DOI: 10.1039/c3ob41122b] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
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11
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Legdali T, Roux A, Platas-Iglesias C, Camerel F, Nonat AM, Charbonnière LJ. Substitution-Assisted Stereochemical Control of Bispidone-Based Ligands. J Org Chem 2012; 77:11167-76. [DOI: 10.1021/jo302248c] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Tarik Legdali
- Laboratoire d’Ingénierie
Moléculaire Appliquée à l’Analyse, IPHC,
UMR 7178 CNRS/UdS, ECPM, Bât R1N0, 25 rue Becquerel, 67087
Strasbourg Cedex 02, France
| | - Amandine Roux
- Laboratoire d’Ingénierie
Moléculaire Appliquée à l’Analyse, IPHC,
UMR 7178 CNRS/UdS, ECPM, Bât R1N0, 25 rue Becquerel, 67087
Strasbourg Cedex 02, France
| | - Carlos Platas-Iglesias
- Departamento de Química
Fundamental, Universidade da Coruña, Campus da Zapateira- Rúa da Fraga 10, 15008, A Coruña,
Spain
| | - Franck Camerel
- Laboratoire Matière
Condensée
et Systèmes Électroactifs, Institut des Sciences Chimiques
de Rennes, UMR 6226, 263 Avenue du General Leclerc, CS 74205, 35042
Rennes Cedex, France
| | - Aline M. Nonat
- Laboratoire d’Ingénierie
Moléculaire Appliquée à l’Analyse, IPHC,
UMR 7178 CNRS/UdS, ECPM, Bât R1N0, 25 rue Becquerel, 67087
Strasbourg Cedex 02, France
| | - Loïc J. Charbonnière
- Laboratoire d’Ingénierie
Moléculaire Appliquée à l’Analyse, IPHC,
UMR 7178 CNRS/UdS, ECPM, Bât R1N0, 25 rue Becquerel, 67087
Strasbourg Cedex 02, France
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12
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Plas A, Marchand F, Eschalier A, Troin Y, Chalard P. Stereoselective Synthesis and In Vivo Evaluation of the Analgesic Activity of Polysubstituted Bispidines. European J Org Chem 2012. [DOI: 10.1002/ejoc.201200919] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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13
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Zayya AI, Spencer JL. Synthetic and structural study of 4-phosphacyclohexanones and 3-aza-7-phosphabicyclo[3.3.1]nonan-9-ones. Tetrahedron 2012. [DOI: 10.1016/j.tet.2012.04.038] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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14
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Cunningham CW, Rothman RB, Prisinzano TE. Neuropharmacology of the naturally occurring kappa-opioid hallucinogen salvinorin A. Pharmacol Rev 2011; 63:316-47. [PMID: 21444610 DOI: 10.1124/pr.110.003244] [Citation(s) in RCA: 83] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023] Open
Abstract
Salvia divinorum is a perennial sage native to Oaxaca, Mexico, that has been used traditionally in divination rituals and as a treatment for the "semimagical" disease panzón de borrego. Because of the intense "out-of-body" experiences reported after inhalation of the pyrolized smoke, S. divinorum has been gaining popularity as a recreational hallucinogen, and the United States and several other countries have regulated its use. Early studies isolated the neoclerodane diterpene salvinorin A as the principal psychoactive constituent responsible for these hallucinogenic effects. Since the finding that salvinorin A exerts its potent psychotropic actions through the activation of KOP receptors, there has been much interest in elucidating the underlying mechanisms behind its effects. These effects are particularly remarkable, because 1) salvinorin A is the first reported non-nitrogenous opioid receptor agonist, and 2) its effects are not mediated by the 5-HT(2A) receptor, the classic target of hallucinogens such as lysergic acid diethylamide and mescaline. Rigorous investigation into the structural features of salvinorin A responsible for opioid receptor affinity and selectivity has produced numerous receptor probes, affinity labels, and tools for evaluating the biological processes responsible for its observed psychological effects. Salvinorin A has therapeutic potential as a treatment for pain, mood and personality disorders, substance abuse, and gastrointestinal disturbances, and suggests that nonalkaloids are potential scaffolds for drug development for aminergic G-protein coupled receptors.
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15
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Insights into subtype selectivity of opioid agonists by ligand-based and structure-based methods. J Mol Model 2010; 17:477-93. [DOI: 10.1007/s00894-010-0745-1] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2010] [Accepted: 05/04/2010] [Indexed: 11/24/2022]
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16
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Yamaotsu N, Hirono S. 3D-Pharmacophore Identification for κ-Opioid Agonists Using Ligand-Based Drug-Design Techniques. Top Curr Chem (Cham) 2010; 299:277-307. [DOI: 10.1007/128_2010_84] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
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17
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Zhang J, Liu G, Tang Y. Chemical function-based pharmacophore generation of selective kappa-opioid receptor agonists by catalyst and phase. J Mol Model 2009; 15:1027-41. [PMID: 19205759 DOI: 10.1007/s00894-008-0418-5] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/14/2008] [Accepted: 10/08/2008] [Indexed: 10/21/2022]
Abstract
Two chemical function-based pharmacophore models of selective kappa-opioid receptor agonists were generated by using two different programs: Catalyst/HypoGen and Phase. The best output hypothesis (Hypo1) of HypoGen consisted of five features: one hydrogen-bond acceptor (HA), three hydrophobic points (HY), and one positive ionizable function (PI). The highest scoring model (Hypo2) produced by Phase comprised four features: one acceptor (A), one positive ionizable function (P), and two aromatic ring features (R). These two models (Hypo1 and Hypo2) were then validated by test set prediction and enrichment factors. They were shown to be able to identify highly potent kappa-agonists within a certain range, and satisfactory enrichments were achieved. The features of these two pharmacophore models were similar and consistent with experiment data. The models produced here were also generally in accord with other reported models. Therefore, our pharmacophore models were considered as valuable tools for 3D virtual screening, and could be useful for designing novel kappa-agonists.
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Affiliation(s)
- Jing Zhang
- Laboratory of Molecular Modeling and Design, School of Pharmacy, East China University of Science and Technology, Box 268, 130 Meilong Road, Shanghai, 200237, China
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18
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Juran S, Walther M, Stephan H, Bergmann R, Steinbach J, Kraus W, Emmerling F, Comba P. Hexadentate Bispidine Derivatives as Versatile Bifunctional Chelate Agents for Copper(II) Radioisotopes. Bioconjug Chem 2009; 20:347-59. [DOI: 10.1021/bc800461e] [Citation(s) in RCA: 84] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Stefanie Juran
- Forschungszentrum Dresden-Rossendorf, Institute of Radiopharmacy, PF 510119, D-01314 Dresden, Germany, Bundesanstalt für Materialforschung and -prüfung, Richard-Willstätter-Strasse 11, D-12489, Berlin, Germany, and Universität Heidelberg, Anorganisch-Chemisches Institut, Im Neuenheimer Feld 270, D-69120 Heidelberg, Germany
| | - Martin Walther
- Forschungszentrum Dresden-Rossendorf, Institute of Radiopharmacy, PF 510119, D-01314 Dresden, Germany, Bundesanstalt für Materialforschung and -prüfung, Richard-Willstätter-Strasse 11, D-12489, Berlin, Germany, and Universität Heidelberg, Anorganisch-Chemisches Institut, Im Neuenheimer Feld 270, D-69120 Heidelberg, Germany
| | - Holger Stephan
- Forschungszentrum Dresden-Rossendorf, Institute of Radiopharmacy, PF 510119, D-01314 Dresden, Germany, Bundesanstalt für Materialforschung and -prüfung, Richard-Willstätter-Strasse 11, D-12489, Berlin, Germany, and Universität Heidelberg, Anorganisch-Chemisches Institut, Im Neuenheimer Feld 270, D-69120 Heidelberg, Germany
| | - Ralf Bergmann
- Forschungszentrum Dresden-Rossendorf, Institute of Radiopharmacy, PF 510119, D-01314 Dresden, Germany, Bundesanstalt für Materialforschung and -prüfung, Richard-Willstätter-Strasse 11, D-12489, Berlin, Germany, and Universität Heidelberg, Anorganisch-Chemisches Institut, Im Neuenheimer Feld 270, D-69120 Heidelberg, Germany
| | - Jörg Steinbach
- Forschungszentrum Dresden-Rossendorf, Institute of Radiopharmacy, PF 510119, D-01314 Dresden, Germany, Bundesanstalt für Materialforschung and -prüfung, Richard-Willstätter-Strasse 11, D-12489, Berlin, Germany, and Universität Heidelberg, Anorganisch-Chemisches Institut, Im Neuenheimer Feld 270, D-69120 Heidelberg, Germany
| | - Werner Kraus
- Forschungszentrum Dresden-Rossendorf, Institute of Radiopharmacy, PF 510119, D-01314 Dresden, Germany, Bundesanstalt für Materialforschung and -prüfung, Richard-Willstätter-Strasse 11, D-12489, Berlin, Germany, and Universität Heidelberg, Anorganisch-Chemisches Institut, Im Neuenheimer Feld 270, D-69120 Heidelberg, Germany
| | - Franziska Emmerling
- Forschungszentrum Dresden-Rossendorf, Institute of Radiopharmacy, PF 510119, D-01314 Dresden, Germany, Bundesanstalt für Materialforschung and -prüfung, Richard-Willstätter-Strasse 11, D-12489, Berlin, Germany, and Universität Heidelberg, Anorganisch-Chemisches Institut, Im Neuenheimer Feld 270, D-69120 Heidelberg, Germany
| | - Peter Comba
- Forschungszentrum Dresden-Rossendorf, Institute of Radiopharmacy, PF 510119, D-01314 Dresden, Germany, Bundesanstalt für Materialforschung and -prüfung, Richard-Willstätter-Strasse 11, D-12489, Berlin, Germany, and Universität Heidelberg, Anorganisch-Chemisches Institut, Im Neuenheimer Feld 270, D-69120 Heidelberg, Germany
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Levinger S, Sharabi-Ronen Y, Mainfeld A, Albeck A. Structural and Spatial Considerations in the N,N′-Diacyl- and Bis(alkoxycarbonyl)bispidinone Series. J Org Chem 2008; 73:7793-6. [DOI: 10.1021/jo801423a] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Shlomo Levinger
- Department of Chemistry, Bar-Ilan University, Ramat-Gan 52900, Israel
| | | | | | - Amnon Albeck
- Department of Chemistry, Bar-Ilan University, Ramat-Gan 52900, Israel
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20
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21
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Comba P, Kerscher M, Schiek W. Bispidine Coordination Chemistry. PROGRESS IN INORGANIC CHEMISTRY 2008. [DOI: 10.1002/9780470144428.ch9] [Citation(s) in RCA: 71] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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22
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Singh N, Nolan TL, McCurdy CR. Chemical function-based pharmacophore development for novel, selective kappa opioid receptor agonists. J Mol Graph Model 2008; 27:131-9. [PMID: 18456526 DOI: 10.1016/j.jmgm.2008.03.007] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2008] [Revised: 03/14/2008] [Accepted: 03/19/2008] [Indexed: 11/25/2022]
Abstract
In an effort to reduce or eliminate the centrally associated side effects produced by opioid analgesics there has been an interest in the preparation of peripherally acting opioid receptor agonists. These compounds would have very limited or no access to the central nervous system. As a first step towards developing peripheral kappa opioid receptor (KOP) agonists, we have developed a quantitatively predictive chemical function-based pharmacophore model of selective kappa opioid receptor agonists by using the HypoGen algorithm implemented in the Catalyst software. The input for HypoGen was a training set of 26 KOP agonists exhibiting K(i) values ranging between 0.015nM and 2300nM. The best output hypothesis consists of four features: one hydrophobic (HYD), one ring aromatic (RA), one hydrogen bond acceptor (HBA), and one positive ionizable (PI) function. The predictive power of the model could be demonstrated by internal and external validation of the generated hypothesis. The resulting Catalyst pharmacophore can be used concurrently for rapid virtual screening of chemical databases to identify novel, selective KOP agonists that may be easily restricted to target tissues by synthetic modification. It is anticipated that such an approach will lead to the generation of novel selective KOP agonists that are clinically useful for the treatment of pain through peripheral mechanisms.
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Affiliation(s)
- Nidhi Singh
- Department of Medicinal Chemistry, Laboratory for Applied Drug Design and Synthesis, The University of Mississippi, Mississippi 38677, USA
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23
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Barnes NA, Brooker AT, Godfrey SM, Mallender PR, Pritchard RG, Sadler M. The Synthesis and Structural Characterisation of a Series of Hydrophobic Piperidones and Bispidones. European J Org Chem 2008. [DOI: 10.1002/ejoc.200700961] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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24
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Wu YC, Lin JS, Hwang CC. Structure−Activity Relationships of αS1-Casomorphin Using AM1 Calculations and Molecular Dynamics Simulations. J Phys Chem B 2007; 111:7377-83. [PMID: 17530883 DOI: 10.1021/jp070477y] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
This paper investigates the structure-activity relationships of alphaS1-casomorphin (alphaS1-CM) using AM1 calculations and molecular dynamics (MD) simulations. Previous studies have shown that this peptide has remarkable opioid actions, and not only has a high affinity toward all three subtypes (kappa1-kappa3) of the kappa-opioid sites, but also inhibits the proliferation of the T47D human breast cancer cell line. The systematic conformer search performed by the AM1 calculations is based on the torsional angles of the Val2-Pro3 (omega2) and Phe4-Pro5 (omega4) amide bonds. The AM1 results reveal that the alphaS1-CM conformers strongly favor the cis/cis pair of the omega2/omega4 amide bonds in the minimized energy state. Furthermore, the picture of these stable conformers is found to be a strong interaction of the coulomb's force between two terminuses. MD simulations are performed to investigate the features of both the structural stability and pharmacological activity of alphaS1-CM in aqueous solution. The simulation results reveal that the omega2/omega4 amide bonds favor the cis/cis status in the stable state. Furthermore, the pharmacophoric distance between two aromatic rings is found to be 5.0 approximately 5.4A. The chi1 rotamers of the Tyr and Phe residues show a preference for gauche (-) and trans, respectively. The side chain rotamers of alphaS1-CM are competed to those of other opioid ligands with a known potency and selectivity for delta- and mu-opioid receptors. Finally, we address a likely kappa pharmacophore model compared to the delta pharmacophore model.
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Affiliation(s)
- Yng-Ching Wu
- Department of Engineering Science, National Cheng Kung University, Tainan 701, Taiwan
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25
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Chu GH, Gu M, Cassel JA, Belanger S, Graczyk TM, DeHaven RN, Conway-James N, Koblish M, Little PJ, DeHaven-Hudkins DL, Dolle RE. Novel malonamide derivatives as potent κ opioid receptor agonists. Bioorg Med Chem Lett 2007; 17:1951-5. [PMID: 17307360 DOI: 10.1016/j.bmcl.2007.01.053] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2006] [Revised: 01/08/2007] [Accepted: 01/09/2007] [Indexed: 11/16/2022]
Abstract
A novel series of malonamide derivatives was synthesized. These amides were shown to be potent and selective kappa opioid receptor agonists.
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Affiliation(s)
- Guo-Hua Chu
- Department of Chemistry, Adolor Corporation, 700 Pennsylvania Drive, Exton, PA 19341, USA.
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Chu GH, Gu M, Cassel JA, Belanger S, Stabley GJ, DeHaven RN, Conway-James N, Koblish M, Little PJ, DeHaven-Hudkins DL, Dolle RE. Novel phenylamino acetamide derivatives as potent and selective kappa opioid receptor agonists. Bioorg Med Chem Lett 2005; 16:645-8. [PMID: 16263278 DOI: 10.1016/j.bmcl.2005.10.034] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2005] [Revised: 10/10/2005] [Accepted: 10/12/2005] [Indexed: 11/15/2022]
Abstract
A novel series of phenylamino acetamide derivatives was synthesized. These amides were shown to be potent and selective kappa opioid receptor agonists.
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Affiliation(s)
- Guo-Hua Chu
- Department of Chemistry, Adolor Corporation, 700 Pennsylvania Drive, Exton, PA 19341, USA.
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