1
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Rungta P, Kumar M, Mangla P, Kumar S, Prasad AK. Chemo-enzymatic access to C-4′-hydroxyl-tetrahydrofurano-spironucleosides. NEW J CHEM 2021. [DOI: 10.1039/d0nj03253k] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
The biocatalytic synthesis of C-4′-hydroxyl-tetrahydrofurano-spironucleosides where the tetrahydrofuranospirocyclic ring at C-4′ position locks the furanose ring of nucleosides in the NE-conformation (C4′-exo).
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Affiliation(s)
- Pallavi Rungta
- Bioorganic Laboratory
- Department of Chemistry
- University of Delhi
- Delhi
- India
| | - Manish Kumar
- Bioorganic Laboratory
- Department of Chemistry
- University of Delhi
- Delhi
- India
| | - Priyanka Mangla
- Bioorganic Laboratory
- Department of Chemistry
- University of Delhi
- Delhi
- India
| | - Sandeep Kumar
- Bioorganic Laboratory
- Department of Chemistry
- University of Delhi
- Delhi
- India
| | - Ashok K. Prasad
- Bioorganic Laboratory
- Department of Chemistry
- University of Delhi
- Delhi
- India
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2
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Kumar R, Kumar M, Kumar V, Kumar A, Haque N, Kumar R, Prasad AK. Recent progress in the synthesis of C-4′-spironucleosides and its future perspectives. SYNTHETIC COMMUN 2020. [DOI: 10.1080/00397911.2020.1803914] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Affiliation(s)
- Rajesh Kumar
- Department of Chemistry, R.D.S. College, B. R. A. Bihar University, Muzaffarpur, India
| | - Manish Kumar
- Department of Chemistry, Motilal Nehru College, University of Delhi, Delhi, India
| | - Vijay Kumar
- Department of Chemistry, L. S. College, B. R. A. Bihar University, Muzaffarpur, India
| | - Arbind Kumar
- Department of Chemistry, L. S. College, B. R. A. Bihar University, Muzaffarpur, India
| | - Navedul Haque
- University Department of Chemistry, B. R. A. Bihar University, Muzaffarpur, India
| | - Ram Kumar
- Department of Chemistry, R.D.S. College, B. R. A. Bihar University, Muzaffarpur, India
| | - Ashok K. Prasad
- Bioorganic Laboratory, Department of Chemistry, University of Delhi, Delhi, India
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3
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Verhoeven J, De Vleeschouwer F, Kong H, Van Hecke K, Pande V, Sun W, Vos A, Wu T, Meerpoel L, Thuring JW, Verniest G. Preparation of 4'-Spirocyclobutyl Nucleoside Analogues as Novel and Versatile Adenosine Scaffolds. Chemistry 2019; 25:15419-15423. [PMID: 31609050 DOI: 10.1002/chem.201904574] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2019] [Indexed: 11/10/2022]
Abstract
Despite the large variety of modified nucleosides that have been reported, the preparation of constrained 4'-spirocyclic adenosine analogues has received very little attention. We discovered that the [2+2]-cycloaddition of dichloroketene on readily available 4'-exo-methylene furanose sugars efficiently results in the diastereoselective formation of novel 4'-spirocyclobutanones. The reaction mechanism was investigated via density functional theory (DFT) and found to proceed either via a non-synchronous or stepwise reaction sequence, controlled by the stereochemistry at the 3'-position of the sugar substrate. The obtained dichlorocyclobutanones were converted into nucleoside analogues, providing access to a novel class of chiral 4'-spirocyclobutyl adenosine mimetics in eight steps from commercially available sugars. Assessment of the biological activity of designed 4'-spirocyclic adenosine analogues identified potent inhibitors for protein methyltransferase target PRMT5.
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Affiliation(s)
- Jonas Verhoeven
- Research Group of Organic Chemistry (ORGC), Department of Chemistry and Department of Bio-engineering Sciences, Faculty of Science and Bio-engineering Sciences, Vrije Universiteit Brussel (VUB), Pleinlaan 2, 1050, Brussels, Belgium
| | - Freija De Vleeschouwer
- Research Group of Organic Chemistry (ORGC), Department of Chemistry and Department of Bio-engineering Sciences, Faculty of Science and Bio-engineering Sciences, Vrije Universiteit Brussel (VUB), Pleinlaan 2, 1050, Brussels, Belgium.,Research Group of General Chemistry (ALGC), Vrije Universiteit Brussel, Pleinlaan 2, 1050, Brussels, Belgium
| | - Hanchu Kong
- Department of Synthetic Chemistry, Pharmaron Beijing Co., Ltd., 6 Taihe Road BDA, Beijing, 100176, P. R. China
| | - Kristof Van Hecke
- Department of Chemistry, Ghent University, Krijgslaan 281-S3, 9000, Ghent, Belgium
| | - Vineet Pande
- Janssen Pharmaceutica NV, Turnhoutseweg 30, 2340, Beerse, Belgium
| | - Weimei Sun
- Janssen Pharmaceutica NV, Turnhoutseweg 30, 2340, Beerse, Belgium
| | - Ann Vos
- Janssen Pharmaceutica NV, Turnhoutseweg 30, 2340, Beerse, Belgium
| | - Tongfei Wu
- Janssen Pharmaceutica NV, Turnhoutseweg 30, 2340, Beerse, Belgium
| | - Lieven Meerpoel
- Janssen Pharmaceutica NV, Turnhoutseweg 30, 2340, Beerse, Belgium
| | | | - Guido Verniest
- Research Group of Organic Chemistry (ORGC), Department of Chemistry and Department of Bio-engineering Sciences, Faculty of Science and Bio-engineering Sciences, Vrije Universiteit Brussel (VUB), Pleinlaan 2, 1050, Brussels, Belgium.,Janssen Pharmaceutica NV, Turnhoutseweg 30, 2340, Beerse, Belgium
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4
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Bandaru SSM, Bhilare S, Cardozo J, Chrysochos N, Schulzke C, Sanghvi YS, Gunturu KC, Kapdi AR. Pd/PTABS: Low-Temperature Thioetherification of Chloro(hetero)arenes. J Org Chem 2019; 84:8921-8940. [DOI: 10.1021/acs.joc.9b00840] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
| | - Shatrughn Bhilare
- Department of Chemistry, Institute of Chemical Technology, Nathalal Parekh Road, Matunga, Mumbai 400019, India
| | - Jesvita Cardozo
- Department of Chemistry, Institute of Chemical Technology, Nathalal Parekh Road, Matunga, Mumbai 400019, India
| | - Nicolas Chrysochos
- Institut für Biochemie, Universität Greifswald, Felix-Hausdorff-Straße 4, Greifswald D-17487, Germany
| | - Carola Schulzke
- Institut für Biochemie, Universität Greifswald, Felix-Hausdorff-Straße 4, Greifswald D-17487, Germany
| | - Yogesh S. Sanghvi
- Rasayan Inc., 2802 Crystal Ridge Road, Encinitas, California 92024-6615, United States
| | | | - Anant R. Kapdi
- Department of Chemistry, Institute of Chemical Technology, Nathalal Parekh Road, Matunga, Mumbai 400019, India
- Institute of Chemical Technology, Indian Oil Odisha Campus, IIT Kharagpur Extension Centre, Mouza
Samantpuri, Bhubaneswar, Odisha 751013, India
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5
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Cobb AJA, Dell’Isola A, Abdulsattar BO, McLachlan MMW, Neuman BW, Müller C, Shankland K, Al-Mulla HMN, Binks AWD, Elvidge W. Synthesis and antiviral activity of novel spirocyclic nucleosides. NEW J CHEM 2018. [DOI: 10.1039/c8nj02777c] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A diverse range of spirocyclic nucleosides have been prepared from a common precursor and tested for their antiviral activity.
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Affiliation(s)
- Alexander J. A. Cobb
- School of Chemistry, Food and Pharmacy (SCFP), University of Reading
- Berks RG6 6AD
- UK
| | - Antonio Dell’Isola
- School of Chemistry, Food and Pharmacy (SCFP), University of Reading
- Berks RG6 6AD
- UK
| | | | | | | | - Christin Müller
- Institut für Medizinische Virologie
- Justus-Liebig-Universität Giessen
- 35392 Giessen
- Germany
| | - Kenneth Shankland
- School of Chemistry, Food and Pharmacy (SCFP), University of Reading
- Berks RG6 6AD
- UK
| | | | | | - Warren Elvidge
- School of Biological Sciences
- University of Reading
- Berks RG6 6AJ
- UK
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6
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Yang G, Wang T, Chai J, Chai Z. AlCl3-Catalyzed [3+2] Annulations ofcis-2,3-Disubstituted Cyclopropane 1,1-Diesters with Cyclic Ketones: Diastereoselective Construction of Spirotetrahydrofurans. European J Org Chem 2014. [DOI: 10.1002/ejoc.201403325] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
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7
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Miralles-Llumà R, Figueras A, Busqué F, Alvarez-Larena A, Balzarini J, Figueredo M, Font J, Alibés R, Maréchal JD. Synthesis, Antiviral Evaluation, and Computational Studies of Cyclobutane and CyclobuteneL-Nucleoside Analogues. European J Org Chem 2013. [DOI: 10.1002/ejoc.201301097] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
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8
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Niu HY, Xia C, Qu GR, Wu S, Jiang Y, Jin X, Guo HM. Microwave-Promoted “One-Pot” Synthesis of 4-Nitrobenzylthioinosine Analogues Using Thiourea as a Sulfur Precursor. Chem Asian J 2011; 7:45-9. [DOI: 10.1002/asia.201100699] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2011] [Indexed: 11/06/2022]
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9
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Flores R, Rustullet A, Alibés R, Álvarez-Larena A, de March P, Figueredo M, Font J. Synthesis of Purine Nucleosides Built on a 3-Oxabicyclo[3.2.0]heptane Scaffold. J Org Chem 2011; 76:5369-83. [DOI: 10.1021/jo200775x] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- Ramon Flores
- Departament de Quı́mica and ‡Unitat de Crystal·lografia, Universitat Autònoma de Barcelona, 08193 Bellaterra, Spain
| | - Albert Rustullet
- Departament de Quı́mica and ‡Unitat de Crystal·lografia, Universitat Autònoma de Barcelona, 08193 Bellaterra, Spain
| | - Ramon Alibés
- Departament de Quı́mica and ‡Unitat de Crystal·lografia, Universitat Autònoma de Barcelona, 08193 Bellaterra, Spain
| | - Angel Álvarez-Larena
- Departament de Quı́mica and ‡Unitat de Crystal·lografia, Universitat Autònoma de Barcelona, 08193 Bellaterra, Spain
| | - Pedro de March
- Departament de Quı́mica and ‡Unitat de Crystal·lografia, Universitat Autònoma de Barcelona, 08193 Bellaterra, Spain
| | - Marta Figueredo
- Departament de Quı́mica and ‡Unitat de Crystal·lografia, Universitat Autònoma de Barcelona, 08193 Bellaterra, Spain
| | - Josep Font
- Departament de Quı́mica and ‡Unitat de Crystal·lografia, Universitat Autònoma de Barcelona, 08193 Bellaterra, Spain
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10
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Lebreton J, Escudier JM, Arzel L, Len C. Synthesis of Bicyclonucleosides Having a C−C Bridge. Chem Rev 2010; 110:3371-418. [DOI: 10.1021/cr800465j] [Citation(s) in RCA: 54] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Jacques Lebreton
- Université de Nantes, CNRS, Laboratoire CEISAM-UMR-CNRS 6230, Faculté des Sciences et des Techniques, 2 rue de la Houssinière, BP 92208, 44322 Nantes Cedex 3, France, Université Paul Sabatier Laboratoire de Synthèse et Physicochimie des Molécules d’Intérêt Biologique - UMR-CNRS 5068, 31062 Toulouse Cedex, France, and Université de Technologie de Compiègne, Ecole Supérieure de Chimie Organique Minérale, EA 4297, Transformations Intégrées de la Matière Renouvelable, 1 allée du Réseau Jean-Marie Buckmaster,
| | - Jean-Marc Escudier
- Université de Nantes, CNRS, Laboratoire CEISAM-UMR-CNRS 6230, Faculté des Sciences et des Techniques, 2 rue de la Houssinière, BP 92208, 44322 Nantes Cedex 3, France, Université Paul Sabatier Laboratoire de Synthèse et Physicochimie des Molécules d’Intérêt Biologique - UMR-CNRS 5068, 31062 Toulouse Cedex, France, and Université de Technologie de Compiègne, Ecole Supérieure de Chimie Organique Minérale, EA 4297, Transformations Intégrées de la Matière Renouvelable, 1 allée du Réseau Jean-Marie Buckmaster,
| | - Laurence Arzel
- Université de Nantes, CNRS, Laboratoire CEISAM-UMR-CNRS 6230, Faculté des Sciences et des Techniques, 2 rue de la Houssinière, BP 92208, 44322 Nantes Cedex 3, France, Université Paul Sabatier Laboratoire de Synthèse et Physicochimie des Molécules d’Intérêt Biologique - UMR-CNRS 5068, 31062 Toulouse Cedex, France, and Université de Technologie de Compiègne, Ecole Supérieure de Chimie Organique Minérale, EA 4297, Transformations Intégrées de la Matière Renouvelable, 1 allée du Réseau Jean-Marie Buckmaster,
| | - Christophe Len
- Université de Nantes, CNRS, Laboratoire CEISAM-UMR-CNRS 6230, Faculté des Sciences et des Techniques, 2 rue de la Houssinière, BP 92208, 44322 Nantes Cedex 3, France, Université Paul Sabatier Laboratoire de Synthèse et Physicochimie des Molécules d’Intérêt Biologique - UMR-CNRS 5068, 31062 Toulouse Cedex, France, and Université de Technologie de Compiègne, Ecole Supérieure de Chimie Organique Minérale, EA 4297, Transformations Intégrées de la Matière Renouvelable, 1 allée du Réseau Jean-Marie Buckmaster,
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11
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Ghosh R, Maity JK, Achari B, Mandal SB. Locked Nucleosides Based on Oxabicyclo[3.2.1]octane and Oxabicyclo[2.2.1]heptane Skeletons. J Org Chem 2010; 75:2419-22. [DOI: 10.1021/jo100194z] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Ramprasad Ghosh
- Department of Chemistry, Indian Institute of Chemical Biology (a unit of CSIR), 4, Raja S. C. Mullick Road, Jadavpur, Kolkata 700 032, India
| | - Joy Krishna Maity
- Department of Chemistry, Indian Institute of Chemical Biology (a unit of CSIR), 4, Raja S. C. Mullick Road, Jadavpur, Kolkata 700 032, India
| | - Basudeb Achari
- Department of Chemistry, Indian Institute of Chemical Biology (a unit of CSIR), 4, Raja S. C. Mullick Road, Jadavpur, Kolkata 700 032, India
| | - Sukhendu B Mandal
- Department of Chemistry, Indian Institute of Chemical Biology (a unit of CSIR), 4, Raja S. C. Mullick Road, Jadavpur, Kolkata 700 032, India
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12
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Chen W, Pinto BM. Synthesis of aza- and thia-spiroheterocycles and attempted synthesis of spiro sulfonium compounds related to salacinol. Carbohydr Res 2007; 342:2163-72. [PMID: 17669386 DOI: 10.1016/j.carres.2007.07.003] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2007] [Revised: 07/01/2007] [Accepted: 07/03/2007] [Indexed: 11/16/2022]
Abstract
The synthesis of aza- and thia-spiroheterocycles and the attempted synthesis of spiro sulfonium compounds related to salacinol are described. The binding of the nanomolar inhibitor swainsonine to Drosophila Golgi alpha-mannosidase II (dGMII) involves a large contribution of interactions between the six-membered ring of the inhibitor and the hydrophobic pocket within the enzyme active site. Salacinol, a naturally occurring sulfonium ion, is one of the active principles in the aqueous extracts of Salacia reticulata that are traditionally used in Sri Lanka and India for the treatment of diabetes. Spiro aza- and thia-heterocycles and a spiro analogue of salacinol were designed with the expectation that the hydrocarbon portions would make hydrophobic contributions to binding. The former sets of compounds were synthesized successfully but the salacinol analogue proved to be elusive. The stereochemistry of the final compounds was determined by means of 1D-NOESY experiments. The aza- and thia-heterocycles were not effective inhibitors of Golgi alpha-mannosidase II or human maltase glucoamylase.
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Affiliation(s)
- Wang Chen
- Department of Chemistry, Simon Fraser University, Burnaby, British Columbia, Canada V5A 1S6
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13
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Yeom HS, Yoon SJ, Shin S. Au(I)-catalyzed tandem [3,3]-sigmatropic rearrangement–cycloisomerization cascade as a route to spirocyclic furans. Tetrahedron Lett 2007. [DOI: 10.1016/j.tetlet.2007.05.067] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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14
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Sahabuddin S, Roy A, Drew MGB, Roy BG, Achari B, Mandal SB. Sequential Ring-Closing Metathesis and Nitrone Cycloaddition on Glucose-Derived Substrates: A Divergent Approach to Analogues of Spiroannulated Carbanucleosides and Conformationally Locked Nucleosides. J Org Chem 2006; 71:5980-92. [PMID: 16872180 DOI: 10.1021/jo0606554] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The carbohydrate-derived substrate 3-C-allyl-1,2:5,6-di-O-isopropylidene-alpha-D-allofuranose was judiciously manipulated for preparing suitable synthons, which could be converted to a variety of isoxazolidino-spirocycles and -tricycles through the application of ring-closing metathesis (RCM) and intramolecular nitrone cycloaddition (INC) reactions. Cleavage of the isoxazolidine rings of some of these derivatives by transfer hydrogenolysis followed by coupling of the generated amino functionalities with 5-amino-4,6-dichloropyrimidine furnished the corresponding chloropyrimidine nucleosides, which were elaborated to spiroannulated carbanucleosides and conformationally locked bicyclo[2.2.1]heptane/oxa-bicyclo[3.2.1]octane nucleosides. However, use of higher temperature for the cyclization of one of the chloropyrimidines led to the dimethylaminopurine analogue as a sole product, formed via nucleophilic displacement of the chloro group by dimethylamine generated from DMF.
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Affiliation(s)
- Sk Sahabuddin
- Department of Chemistry, Indian Institute of Chemical Biology, Jadavpur, 4, Raja S. C. Mullick Road, Kolkata 700 032, India
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15
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Roy A, Achari B, Mandal SB. An easy access to spiroannulated glyco-oxetane, -thietane and -azetane rings: synthesis of spironucleosides. Tetrahedron Lett 2006. [DOI: 10.1016/j.tetlet.2006.03.175] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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16
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Dong S, Paquette LA. Stereoselective Synthesis of Conformationally Constrained 2‘-Deoxy-4‘-thia β-Anomeric Spirocyclic Nucleosides Featuring Either Hydroxyl Configuration at C5‘. J Org Chem 2005; 70:1580-96. [PMID: 15730276 DOI: 10.1021/jo048071u] [Citation(s) in RCA: 50] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
An enantioselective approach to 2'-deoxy-4'-thia spirocyclic nucleosides featuring an alpha- or beta-hydroxyl substituent at C-5' of the carbocyclic ring is detailed. The starting point is the mandelate acetal 8. The overall strategy involves the stereocontrolled dihydroxylation of this dihydrothiophene, subsequent generation of the keto acetonide 12 followed by its Meerwein-Ponndorf-Verley reduction and beta-elimination, protection of the resulting dihydroxy thiaglycal, electrophilic glycosidation according to the Haraguchi protocol, reductive removal of the phenylseleno group, and end-game global deprotection. Acquisition of the alpha- and beta-5'-isomers is equally facile. Various 1D and 2D NMR techniques are used for assigning configuration.
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Affiliation(s)
- Shuzhi Dong
- Evans Chemical Laboratories, The Ohio State University, Columbus, Ohio 43210, USA
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17
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Hartung R, Paquette LA. Practical Synthesis of Enantiopure Spiro[4.4]nonane C-(2‘-Deoxy)ribonucleosides. J Org Chem 2005; 70:1597-604. [PMID: 15730277 DOI: 10.1021/jo0480601] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
The levorotatory diol 7 has been sequentially monosilylated, dehydrated, and oxidized at the allylic methylene group to provide (+)-12. The enantiomeric dextrorotatory diol 7 has been directed down a different sequence of steps involving monosilylation, dehydration, hydroboration, Swern oxidation, and regioselective introduction of a conjugated double bond to generate (-)-33. The novel feature of these transformations is that two key deoxycarbospironucleoside intermediates of the proper absolute configuration have been made available from enantiomerically related precursors. Also reported is a highly practical and reliable means for the formation of novel 2'-deoxyribonucleosides of novel structural type from these spirocyclic cyclopentenones.
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Affiliation(s)
- Ryan Hartung
- Evans Chemical Laboratories, The Ohio State University, Columbus, Ohio 43210, USA
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