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Sivakrishna B, Islam S, Santra MK, Pal S. Synthesis and cytotoxic evaluation of apioarabinofuranosyl pyrimidines. Drug Dev Res 2019; 81:274-282. [PMID: 31643118 DOI: 10.1002/ddr.21613] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2019] [Revised: 08/30/2019] [Accepted: 09/21/2019] [Indexed: 12/13/2022]
Abstract
In view of the potent anticancer activity of the d-arabino-configured cytosine nucleoside (ara-C), apioarabinofuranosyl pyrimidine nucleosides were designed and synthesized from d-ribose as starting material. The synthetic strategy signifies that tosylation followed by in situ cyclization, one-pot controlled oxidative cleavage and acetylation by Pb(OAc)4 , stereoselective nucleobase condensation, inversion of hydroxyl group and uracil group converted to cytosine as the key steps. Synthesized apioarabinofuranosyl pyrimidine nucleosides were tested using breast, colon, and ovarian cancer cell lines. However, only compound 19a, 19b, and 22b have a moderate growth-suppressive effect against the luminal A breast cancer cell line MCF7.
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Affiliation(s)
- Balija Sivakrishna
- School of Basic Sciences, Indian Institute of Technology Bhubaneswar, Argul, Odisha, India
| | - Sehbanul Islam
- Cancer Biology Laboratory, National Centre for Cell Science, Pune, Maharashtra, India
| | - Manas K Santra
- Cancer Biology Laboratory, National Centre for Cell Science, Pune, Maharashtra, India
| | - Shantanu Pal
- School of Basic Sciences, Indian Institute of Technology Bhubaneswar, Argul, Odisha, India
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2
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Kumamoto H, Fukano M, Imoto S, Kohgo S, Odanaka Y, Amano M, Kuwata-Higashi N, Mitsuya H, Haraguchi K, Fukuhara K. A novel entecavir analogue constructing with a spiro[2.4]heptane core structure in the aglycon moiety: Its synthesis and evaluation for anti-hepatitis B virus activity. NUCLEOSIDES NUCLEOTIDES & NUCLEIC ACIDS 2017; 36:463-473. [PMID: 28574799 DOI: 10.1080/15257770.2017.1322209] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Abstract
Synthesis of a novel 2'-deoxy-guanine carbocyclic nucleoside 4 constructed with spiro[2.4]heptane core structure in the aglycon moiety was carried out. Radical-mediated 5-exo-dig mode cyclization and following cyclopropanation proceeded efficiently to furnish the spiro alcohol 10. Subsequent Mitsunobu-type glycosylation between 13 and 14, deoxygenation of the 2'-hydroxyl group of 16 and deprotection of 17 gave the title compound 4. Compound 4 demonstrated moderate anti-HBV activity (EC50 value of 0.12 ± 0.02 µM) and no cytotoxicity against HepG2 cells was observed up to 100 µM.
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Affiliation(s)
- Hiroki Kumamoto
- a School of Pharmacy , Showa University , Shinagawa-ku , Tokyo , Japan
| | - Misato Fukano
- a School of Pharmacy , Showa University , Shinagawa-ku , Tokyo , Japan
| | - Shuhei Imoto
- b Faculty of Pharmaceutical Sciences , Sojo University , Kumamoto , Japan
| | - Satoru Kohgo
- c Cinical Research Center, National Center for Global Health and Medicine , Tokyo , Japan
| | - Yuki Odanaka
- a School of Pharmacy , Showa University , Shinagawa-ku , Tokyo , Japan
| | - Masayuki Amano
- d Departments of Infectious Diseases and Hematology , Kumamoto University School of Medicine , Kumamoto , Japan
| | - Nobuyo Kuwata-Higashi
- c Cinical Research Center, National Center for Global Health and Medicine , Tokyo , Japan
| | - Hiroaki Mitsuya
- c Cinical Research Center, National Center for Global Health and Medicine , Tokyo , Japan.,d Departments of Infectious Diseases and Hematology , Kumamoto University School of Medicine , Kumamoto , Japan.,e Experimental Retrovirology Section, HIV and AIDS Malignancy Branch, National Cancer Institute , National Institutes of Health , Bethesda , Maryland , USA
| | | | - Kiyoshi Fukuhara
- a School of Pharmacy , Showa University , Shinagawa-ku , Tokyo , Japan
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3
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Das S, Panda A, Pal S. A common and versatile synthetic route to (-) and (+) pentenomycin I, (+) halopentenomycin I and dehydropentenomycin. Carbohydr Res 2015; 416:24-31. [PMID: 26342153 DOI: 10.1016/j.carres.2015.08.003] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2015] [Revised: 06/09/2015] [Accepted: 08/12/2015] [Indexed: 10/23/2022]
Abstract
A versatile and stereoselective total synthesis of (+) and (-) pentenomycin I, (+) halopentenomycins I and dehydropentenomycin from a common chiral polyhydroxylated cyclopentene through oxidation and protection/deprotection has been described. Stereoselective hydroxymethylation, stereoselective Grignard reaction and ring closing metathesis are the key features of our approach.
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Affiliation(s)
- Sulagna Das
- Indian Institute of Technology Bhubaneswar, School of Basic Sciences, Bhubaneswar, Orissa 751007, India
| | - Amarendra Panda
- Indian Institute of Technology Bhubaneswar, School of Basic Sciences, Bhubaneswar, Orissa 751007, India
| | - Shantanu Pal
- Indian Institute of Technology Bhubaneswar, School of Basic Sciences, Bhubaneswar, Orissa 751007, India.
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4
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Panda A, Islam S, Santra MK, Pal S. Lead tetraacetate mediated one pot oxidative cleavage and acetylation reaction: an approach to apio and homologated apio pyrimidine nucleosides and their anticancer activity. RSC Adv 2015. [DOI: 10.1039/c5ra19080k] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022] Open
Abstract
An efficient and versatile strategy towards apio and homologated apio pyrimidines has been described via one pot oxidative cleavage and acetylation using Pb(OAc)4.
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Affiliation(s)
- Amarendra Panda
- School of Basic Sciences Indian Institute of Technology Bhubaneswar
- Bhubaneswar
- India
| | - Sehbanul Islam
- Cancer Biology Laboratory
- National Centre for Cell Science
- Pune
- India
| | | | - Shantanu Pal
- School of Basic Sciences Indian Institute of Technology Bhubaneswar
- Bhubaneswar
- India
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Kim SJ, Woo Y, Park AY, Kim HR, Son S, Yun HY, Chun P, Moon HR. Highly Efficient Synthesis of Conformationally Fixed Bicyclo[3.1.0]hexyl Nucleosides with an Ethenyl Group at C3'-Position as Potential Antiviral Agents. B KOREAN CHEM SOC 2014. [DOI: 10.5012/bkcs.2014.35.9.2649] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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6
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Mulamoottil VA, Nayak A, Jeong LS. Recent Advances in the Synthesis of Carbocyclic Nucleosides via Ring-Closing Metathesis. ASIAN J ORG CHEM 2014. [DOI: 10.1002/ajoc.201402032] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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7
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Brel VK. Synthesis of phosphonate analogs of nucleotides with a 2,5-dihydro-1,2-oxaphospholene carbon skeleton. Chem Heterocycl Compd (N Y) 2013. [DOI: 10.1007/s10593-013-1197-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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8
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Niidu A, Paju A, Müürisepp AM, Järving I, Kailas T, Pehk T, Lopp M. Stereoselective synthesis of 1-methyl-1,2-and 1,3-cyclopentanediols via γ-lactones. Chem Heterocycl Compd (N Y) 2013. [DOI: 10.1007/s10593-013-1206-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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9
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Boutureira O, Matheu MI, Díaz Y, Castillón S. Advances in the enantioselective synthesis of carbocyclic nucleosides. Chem Soc Rev 2013; 42:5056-72. [DOI: 10.1039/c3cs00003f] [Citation(s) in RCA: 84] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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10
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Kumamoto H, Kobayashi M, Kato N, Balzarini J, Tanaka H. Synthesis of the 5′-Fluoro-2′β-methyl Analogues of Neplanocin. European J Org Chem 2011. [DOI: 10.1002/ejoc.201100062] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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11
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Affiliation(s)
- Stéphane P. Roche
- Department of Chemistry, Center for Chemical Methodology and Library Development, Boston University, 590 Commonwealth Avenue, Boston, MA 02215, USA
| | - David J. Aitken
- Université Paris‐Sud 11, Laboratoire de Synthèse Organique & Méthodologie, ICMMO (CNRS UMR 8182), 15 rue Georges Clemenceau, 91405 Orsay cedex, France, Fax: +33‐1‐69156278
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12
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Elhalem E, Pujol CA, Damonte EB, Rodriguez JB. Synthesis and biological evaluation of N-thia-carba-thymidine as an antiherpetic agent. Tetrahedron 2010. [DOI: 10.1016/j.tet.2010.02.092] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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13
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Lebreton J, Escudier JM, Arzel L, Len C. Synthesis of Bicyclonucleosides Having a C−C Bridge. Chem Rev 2010; 110:3371-418. [DOI: 10.1021/cr800465j] [Citation(s) in RCA: 54] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Affiliation(s)
- Jacques Lebreton
- Université de Nantes, CNRS, Laboratoire CEISAM-UMR-CNRS 6230, Faculté des Sciences et des Techniques, 2 rue de la Houssinière, BP 92208, 44322 Nantes Cedex 3, France, Université Paul Sabatier Laboratoire de Synthèse et Physicochimie des Molécules d’Intérêt Biologique - UMR-CNRS 5068, 31062 Toulouse Cedex, France, and Université de Technologie de Compiègne, Ecole Supérieure de Chimie Organique Minérale, EA 4297, Transformations Intégrées de la Matière Renouvelable, 1 allée du Réseau Jean-Marie Buckmaster,
| | - Jean-Marc Escudier
- Université de Nantes, CNRS, Laboratoire CEISAM-UMR-CNRS 6230, Faculté des Sciences et des Techniques, 2 rue de la Houssinière, BP 92208, 44322 Nantes Cedex 3, France, Université Paul Sabatier Laboratoire de Synthèse et Physicochimie des Molécules d’Intérêt Biologique - UMR-CNRS 5068, 31062 Toulouse Cedex, France, and Université de Technologie de Compiègne, Ecole Supérieure de Chimie Organique Minérale, EA 4297, Transformations Intégrées de la Matière Renouvelable, 1 allée du Réseau Jean-Marie Buckmaster,
| | - Laurence Arzel
- Université de Nantes, CNRS, Laboratoire CEISAM-UMR-CNRS 6230, Faculté des Sciences et des Techniques, 2 rue de la Houssinière, BP 92208, 44322 Nantes Cedex 3, France, Université Paul Sabatier Laboratoire de Synthèse et Physicochimie des Molécules d’Intérêt Biologique - UMR-CNRS 5068, 31062 Toulouse Cedex, France, and Université de Technologie de Compiègne, Ecole Supérieure de Chimie Organique Minérale, EA 4297, Transformations Intégrées de la Matière Renouvelable, 1 allée du Réseau Jean-Marie Buckmaster,
| | - Christophe Len
- Université de Nantes, CNRS, Laboratoire CEISAM-UMR-CNRS 6230, Faculté des Sciences et des Techniques, 2 rue de la Houssinière, BP 92208, 44322 Nantes Cedex 3, France, Université Paul Sabatier Laboratoire de Synthèse et Physicochimie des Molécules d’Intérêt Biologique - UMR-CNRS 5068, 31062 Toulouse Cedex, France, and Université de Technologie de Compiègne, Ecole Supérieure de Chimie Organique Minérale, EA 4297, Transformations Intégrées de la Matière Renouvelable, 1 allée du Réseau Jean-Marie Buckmaster,
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Abstract
An efficient synthesis of 6'-isoneplanocin A and 6-isohomoneplanocin A is reported. The key steps in the synthesis include an enyne metathesis and a regioselective oxidation.
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15
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Yang Z, Kim KR, Park AY, Lee HR, Kang JA, Kim WH, Chun P, Gong P, Lee B, Jeong LS, Moon HR. Highly Concise Synthesis of 3'-"Up"-ethynyl-5'-methylbicyclo- [3.1.0]hexyl Purine and Pyrimidine Nucleoside Derivatives Using Rhodium(II) Carbenoid Cycloaddition and Highly Diastereoselective Grignard Reaction. CHINESE J CHEM 2009. [DOI: 10.1002/cjoc.201090016] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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16
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Synthesis of Neplanocin A Analog with 2′-“up”-C-Methyl Substituent as Potential Anti-HCV Agent. B KOREAN CHEM SOC 2009. [DOI: 10.5012/bkcs.2009.30.9.2043] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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17
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Swamy KCK, Kumar NNB, Balaraman E, Kumar KVPP. Mitsunobu and Related Reactions: Advances and Applications. Chem Rev 2009; 109:2551-651. [PMID: 19382806 DOI: 10.1021/cr800278z] [Citation(s) in RCA: 873] [Impact Index Per Article: 58.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- K. C. Kumara Swamy
- School of Chemistry, University of Hyderabad, Hyderabad − 500046, A. P., India
| | - N. N. Bhuvan Kumar
- School of Chemistry, University of Hyderabad, Hyderabad − 500046, A. P., India
| | - E. Balaraman
- School of Chemistry, University of Hyderabad, Hyderabad − 500046, A. P., India
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18
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Synthesis of Methyl-substituted Bicyclic Carbanucleoside Analogs as Potential Antiherpetic Agents. B KOREAN CHEM SOC 2008. [DOI: 10.5012/bkcs.2008.29.10.1977] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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19
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20
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21
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22
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Aubin Y, Audran G, Monti H, De Clercq E. Chemoenzymatic synthesis and antiviral evaluation of conformationally constrained and 3′-methyl-branched carbanucleosides using both enantiomers of the same building block. Bioorg Med Chem 2008; 16:374-81. [PMID: 17905585 DOI: 10.1016/j.bmc.2007.09.030] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2007] [Revised: 09/10/2007] [Accepted: 09/14/2007] [Indexed: 10/22/2022]
Abstract
Starting from both enantiomers of a readily available building block, a straightforward enantioselective approach to constrained 3'-methyl-2',3'-alpha-oxirane-fused and 3'-methyl-3',4'-alpha-oxirane-fused carbanucleosides bearing different purine base analogues is described. The title compounds were evaluated as potential antiviral agents against important viruses. None of the new compounds had significant antiviral activity at a concentration of 100 microg/mL, which was the highest concentration tested.
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Affiliation(s)
- Yoann Aubin
- Laboratoire de Réactivité Organique Sélective, U.M.R. 6180 Chirotechnologies: catalyse et biocatalyse, Université Paul Cézanne, Aix-Marseille III, 13397 Marseille Cedex 20, France
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23
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Abstract
The synthesis of modified nucleic acids has been the subject of much study ever since the structure of DNA was elucidated by Watson and Crick at Cambridge and Wilkins and Franklin at King's College over half a century ago. This review describes recent developments in the synthesis and application of these artificial nucleic acids, predominantly the phosphoramidites which allow for easy inclusion into oligonucleotides, and is divided into three separate sections. Firstly, modifications to the base portion will be discussed followed secondly by modifications to the sugar portion. Finally, changes in the type of nucleic acid linker will be discussed in the third section. Peptide Nucleic Acids (PNAs) are not discussed in this review as they represent a separate and large area of nucleic acid mimics.
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Affiliation(s)
- Alexander J A Cobb
- School of Pharmacy, University of Reading, Whiteknights, Reading, Berks RG6 6AD, UK.
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24
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Petrignet J, Prathap I, Chandrasekhar S, Yadav J, Grée R. A Catalytic Method for Converting Vinylic Furanoses into Cyclopentenones. Angew Chem Int Ed Engl 2007. [DOI: 10.1002/ange.200701663] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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25
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Petrignet J, Prathap I, Chandrasekhar S, Yadav JS, Grée R. A Catalytic Method for Converting Vinylic Furanoses into Cyclopentenones. Angew Chem Int Ed Engl 2007; 46:6297-300. [PMID: 17607673 DOI: 10.1002/anie.200701663] [Citation(s) in RCA: 43] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Julien Petrignet
- Synthèse et Electrosynthèse Organiques, CNRS UMR 6510, Université de Rennes 1, Avenue du Général Leclerc, 35042 Rennes Cedex, France
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26
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Aubin Y, Audran G, Vanthuyne N, Monti H. Chemoenzymatic synthesis of novel adenosine carbanucleoside analogues containing a locked 3′-methyl-2′,3′-β-oxirane-fused system. Tetrahedron 2007. [DOI: 10.1016/j.tet.2007.03.122] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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27
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Herndon JW. The chemistry of the carbon–transition metal double and triple bond: Annual survey covering the year 2005. Coord Chem Rev 2007. [DOI: 10.1016/j.ccr.2006.11.002] [Citation(s) in RCA: 38] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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28
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Madsen R. Synthetic Strategies for Converting Carbohydrates into Carbocycles by the Use of Olefin Metathesis. European J Org Chem 2007. [DOI: 10.1002/ejoc.200600614] [Citation(s) in RCA: 54] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Robert Madsen
- Center for Sustainable and Green Chemistry, Department of Chemistry, Building 201, Technical University of Denmark, 2800 Lyngby, Denmark, Fax: +45‐4593‐3968
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30
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Kim JH, Kim HO, Lee KM, Chun MW, Moon HR, Jeong LS. Asymmetric synthesis of homo-apioneplanocin A from d-ribose. Tetrahedron 2006. [DOI: 10.1016/j.tet.2006.04.042] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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